View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3492_low_16 (Length: 399)

Name: NF3492_low_16
Description: NF3492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3492_low_16
NF3492_low_16
[»] chr2 (43 HSPs)
chr2 (1-382)||(12315478-12315858)
chr2 (176-319)||(8455317-8455460)
chr2 (176-319)||(10543689-10543834)
chr2 (176-319)||(10546153-10546297)
chr2 (192-320)||(14444719-14444846)
chr2 (199-311)||(32781312-32781424)
chr2 (176-319)||(14530309-14530454)
chr2 (176-319)||(21779262-21779403)
chr2 (176-319)||(39914307-39914450)
chr2 (192-319)||(11514427-11514553)
chr2 (236-319)||(24200686-24200769)
chr2 (191-319)||(31158455-31158585)
chr2 (237-319)||(19614983-19615065)
chr2 (176-311)||(9671180-9671313)
chr2 (235-319)||(12023979-12024062)
chr2 (176-319)||(17896250-17896394)
chr2 (235-319)||(19977774-19977858)
chr2 (256-316)||(29419970-29420030)
chr2 (235-319)||(31821403-31821485)
chr2 (235-319)||(17380297-17380380)
chr2 (237-317)||(23145760-23145840)
chr2 (237-317)||(23557550-23557630)
chr2 (220-319)||(21377118-21377217)
chr2 (220-319)||(25641493-25641591)
chr2 (235-319)||(17667993-17668077)
chr2 (238-309)||(17705496-17705567)
chr2 (235-309)||(17623565-17623639)
chr2 (176-294)||(36871509-36871625)
chr2 (237-319)||(40416933-40417015)
chr2 (176-286)||(40762235-40762345)
chr2 (219-319)||(5450276-5450377)
chr2 (199-319)||(44643513-44643634)
chr2 (243-319)||(5841019-5841095)
chr2 (243-319)||(7214525-7214601)
chr2 (192-286)||(17471572-17471668)
chr2 (267-319)||(23397757-23397809)
chr2 (236-299)||(15296468-15296531)
chr2 (176-319)||(25249739-25249881)
chr2 (256-311)||(33795284-33795339)
chr2 (192-317)||(99282-99405)
chr2 (220-308)||(22371059-22371144)
chr2 (176-319)||(25079718-25079862)
chr2 (255-319)||(44604845-44604908)
[»] scaffold0049 (1 HSPs)
scaffold0049 (176-319)||(58968-59113)
[»] chr3 (51 HSPs)
chr3 (199-320)||(12914059-12914180)
chr3 (194-319)||(8247706-8247833)
chr3 (176-319)||(40272813-40272956)
chr3 (176-319)||(13628791-13628936)
chr3 (192-319)||(7943003-7943130)
chr3 (237-319)||(13730666-13730748)
chr3 (237-319)||(30928209-30928291)
chr3 (176-319)||(516422-516568)
chr3 (176-319)||(39203529-39203670)
chr3 (194-319)||(46421054-46421181)
chr3 (176-319)||(26869720-26869862)
chr3 (192-317)||(34420660-34420786)
chr3 (192-317)||(26573142-26573267)
chr3 (235-319)||(4495724-4495808)
chr3 (175-319)||(22609779-22609922)
chr3 (237-319)||(29366784-29366866)
chr3 (176-311)||(1217111-1217244)
chr3 (192-308)||(6411839-6411954)
chr3 (199-304)||(10795447-10795554)
chr3 (176-299)||(31592882-31593003)
chr3 (192-319)||(33926096-33926223)
chr3 (256-319)||(10870033-10870095)
chr3 (260-319)||(35417929-35417988)
chr3 (256-319)||(54032640-54032703)
chr3 (237-299)||(14986990-14987052)
chr3 (175-319)||(22122917-22123059)
chr3 (237-317)||(45620890-45620971)
chr3 (258-319)||(53062051-53062112)
chr3 (192-316)||(53996582-53996707)
chr3 (176-292)||(54484730-54484847)
chr3 (256-319)||(9607216-9607279)
chr3 (192-311)||(19731023-19731142)
chr3 (236-299)||(55401209-55401272)
chr3 (266-319)||(5173811-5173864)
chr3 (235-319)||(7696947-7697029)
chr3 (243-311)||(33235552-33235621)
chr3 (192-309)||(45948855-45948972)
chr3 (231-311)||(52428533-52428614)
chr3 (256-316)||(12525423-12525483)
chr3 (243-319)||(39212003-39212079)
chr3 (236-311)||(1121286-1121361)
chr3 (256-319)||(45139559-45139622)
chr3 (236-287)||(45786277-45786328)
chr3 (192-317)||(54374362-54374488)
chr3 (202-319)||(16735454-16735570)
chr3 (236-317)||(25944484-25944565)
chr3 (256-300)||(43114950-43114995)
chr3 (237-286)||(49013537-49013586)
chr3 (270-319)||(52926305-52926354)
chr3 (235-283)||(9276313-9276361)
chr3 (243-311)||(19751599-19751667)
[»] chr8 (40 HSPs)
chr8 (176-319)||(28817627-28817770)
chr8 (176-319)||(35261670-35261813)
chr8 (192-319)||(36720787-36720914)
chr8 (176-311)||(39460995-39461132)
chr8 (199-319)||(2626510-2626633)
chr8 (192-309)||(44530150-44530267)
chr8 (192-318)||(29521702-29521828)
chr8 (235-319)||(17823567-17823651)
chr8 (236-319)||(18164821-18164903)
chr8 (175-309)||(45071266-45071399)
chr8 (199-304)||(5135313-5135418)
chr8 (199-319)||(12670274-12670392)
chr8 (199-319)||(13160693-13160812)
chr8 (200-316)||(22598151-22598267)
chr8 (237-319)||(20869560-20869640)
chr8 (256-309)||(6760823-6760876)
chr8 (176-308)||(12625891-12626024)
chr8 (192-319)||(20284086-20284217)
chr8 (236-317)||(44781567-44781648)
chr8 (176-319)||(30454098-30454239)
chr8 (235-311)||(389642-389720)
chr8 (192-319)||(21070714-21070846)
chr8 (232-311)||(36918123-36918202)
chr8 (193-299)||(8483956-8484062)
chr8 (199-293)||(29877111-29877205)
chr8 (237-309)||(26954133-26954206)
chr8 (259-311)||(30962857-30962909)
chr8 (240-319)||(11748290-11748369)
chr8 (256-319)||(28407407-28407469)
chr8 (237-319)||(7136591-7136673)
chr8 (194-319)||(8897783-8897908)
chr8 (236-317)||(42083760-42083841)
chr8 (243-311)||(14018037-14018105)
chr8 (192-299)||(5689642-5689749)
chr8 (237-319)||(25250513-25250595)
chr8 (199-319)||(24365083-24365204)
chr8 (266-311)||(31457172-31457217)
chr8 (238-311)||(35105922-35105995)
chr8 (236-309)||(44742580-44742653)
chr8 (220-319)||(23000264-23000360)
[»] chr1 (49 HSPs)
chr1 (176-319)||(46247954-46248097)
chr1 (235-319)||(18724605-18724689)
chr1 (192-319)||(14617052-14617179)
chr1 (192-319)||(23768337-23768464)
chr1 (176-319)||(10668239-10668384)
chr1 (178-319)||(46991818-46991959)
chr1 (176-317)||(35005139-35005282)
chr1 (176-319)||(18944657-18944803)
chr1 (176-319)||(27201661-27201806)
chr1 (199-316)||(32632581-32632697)
chr1 (236-317)||(35117829-35117910)
chr1 (199-319)||(47214525-47214643)
chr1 (235-319)||(4430086-4430170)
chr1 (199-311)||(25468287-25468399)
chr1 (237-309)||(30395790-30395862)
chr1 (176-319)||(34725099-34725240)
chr1 (176-319)||(20004091-20004236)
chr1 (199-319)||(11596527-11596646)
chr1 (247-319)||(22327113-22327185)
chr1 (219-319)||(22930113-22930211)
chr1 (235-319)||(41319866-41319950)
chr1 (192-319)||(6925114-6925241)
chr1 (236-319)||(9939475-9939558)
chr1 (199-309)||(27136675-27136786)
chr1 (178-309)||(45402118-45402251)
chr1 (256-319)||(50760307-50760370)
chr1 (236-317)||(50811955-50812037)
chr1 (236-317)||(2435848-2435929)
chr1 (199-311)||(12126861-12126971)
chr1 (236-317)||(17470407-17470488)
chr1 (195-319)||(20036234-20036359)
chr1 (199-319)||(35253211-35253329)
chr1 (235-319)||(38478342-38478424)
chr1 (176-272)||(4349699-4349795)
chr1 (192-318)||(19701585-19701712)
chr1 (192-291)||(23796507-23796606)
chr1 (256-319)||(25290177-25290242)
chr1 (235-316)||(23371141-23371221)
chr1 (199-319)||(45812561-45812679)
chr1 (222-317)||(6983858-6983951)
chr1 (199-299)||(30682848-30682946)
chr1 (176-292)||(31382215-31382330)
chr1 (192-311)||(45264416-45264536)
chr1 (256-319)||(8197057-8197120)
chr1 (236-319)||(33222998-33223080)
chr1 (243-293)||(20169157-20169207)
chr1 (236-310)||(39215020-39215094)
chr1 (265-317)||(2435983-2436035)
chr1 (256-320)||(15511232-15511296)
[»] chr7 (51 HSPs)
chr7 (175-319)||(11617588-11617732)
chr7 (176-319)||(23419675-23419818)
chr7 (235-319)||(19426949-19427033)
chr7 (220-316)||(27629628-27629724)
chr7 (200-317)||(7644949-7645066)
chr7 (192-319)||(8148963-8149090)
chr7 (192-319)||(35334833-35334958)
chr7 (176-319)||(42391101-42391242)
chr7 (192-311)||(2541036-2541155)
chr7 (237-319)||(42805515-42805597)
chr7 (176-319)||(32758252-32758393)
chr7 (176-319)||(43557463-43557609)
chr7 (237-319)||(47716450-47716532)
chr7 (176-309)||(7879639-7879772)
chr7 (176-311)||(21172010-21172143)
chr7 (199-311)||(48123508-48123620)
chr7 (236-311)||(35203438-35203513)
chr7 (176-319)||(42798660-42798803)
chr7 (199-319)||(10693097-10693215)
chr7 (199-319)||(19266441-19266561)
chr7 (237-309)||(46354195-46354267)
chr7 (236-319)||(5180218-5180301)
chr7 (220-319)||(14099051-14099150)
chr7 (220-319)||(14409068-14409167)
chr7 (231-306)||(15108453-15108527)
chr7 (236-319)||(22699031-22699114)
chr7 (192-319)||(33871927-33872053)
chr7 (176-298)||(34626209-34626330)
chr7 (235-319)||(11741786-11741868)
chr7 (199-319)||(13805093-13805212)
chr7 (199-311)||(18512477-18512588)
chr7 (192-320)||(38262213-38262341)
chr7 (236-311)||(12473303-12473378)
chr7 (256-311)||(16341277-16341332)
chr7 (256-319)||(29907410-29907473)
chr7 (220-298)||(1408469-1408547)
chr7 (192-317)||(18747479-18747605)
chr7 (194-291)||(38604546-38604642)
chr7 (199-319)||(42476864-42476982)
chr7 (176-319)||(48735123-48735265)
chr7 (215-311)||(28362185-28362281)
chr7 (267-311)||(31591199-31591243)
chr7 (256-316)||(42495917-42495976)
chr7 (267-319)||(47077945-47077997)
chr7 (265-319)||(7794596-7794650)
chr7 (256-309)||(18327035-18327087)
chr7 (220-317)||(19265808-19265904)
chr7 (264-309)||(21447591-21447636)
chr7 (235-311)||(6736889-6736964)
chr7 (256-316)||(32233216-32233275)
chr7 (257-309)||(42101967-42102019)
[»] chr5 (29 HSPs)
chr5 (236-318)||(42924895-42924977)
chr5 (176-319)||(38879572-38879717)
chr5 (176-319)||(8169985-8170126)
chr5 (176-319)||(24448881-24449024)
chr5 (176-319)||(41014310-41014452)
chr5 (176-319)||(32703415-32703556)
chr5 (193-307)||(43574609-43574723)
chr5 (220-296)||(24903741-24903817)
chr5 (237-319)||(4619168-4619250)
chr5 (237-319)||(27328743-27328825)
chr5 (192-285)||(16880664-16880757)
chr5 (192-288)||(7097777-7097872)
chr5 (236-319)||(43334193-43334277)
chr5 (192-299)||(19142960-19143066)
chr5 (256-311)||(22025542-22025597)
chr5 (235-316)||(34074622-34074703)
chr5 (236-316)||(22187279-22187359)
chr5 (176-311)||(35710312-35710445)
chr5 (267-319)||(37024646-37024698)
chr5 (256-319)||(23974771-23974834)
chr5 (203-306)||(41425952-41426055)
chr5 (237-299)||(13801831-13801893)
chr5 (176-309)||(1405188-1405321)
chr5 (235-319)||(22600445-22600529)
chr5 (215-299)||(24323745-24323829)
chr5 (215-299)||(24360369-24360453)
chr5 (261-311)||(28516520-28516570)
chr5 (279-320)||(17419904-17419945)
chr5 (235-319)||(22907925-22908008)
[»] chr6 (27 HSPs)
chr6 (176-319)||(29355856-29356001)
chr6 (176-319)||(12221915-12222061)
chr6 (194-310)||(18277212-18277328)
chr6 (192-317)||(23240841-23240964)
chr6 (176-319)||(1346955-1347096)
chr6 (176-319)||(1354758-1354899)
chr6 (231-319)||(32728212-32728300)
chr6 (192-286)||(13628273-13628368)
chr6 (237-319)||(2166474-2166556)
chr6 (237-319)||(2178107-2178189)
chr6 (243-320)||(8409233-8409310)
chr6 (256-319)||(13905060-13905123)
chr6 (236-310)||(14553511-14553585)
chr6 (256-318)||(17432332-17432394)
chr6 (266-319)||(9161114-9161167)
chr6 (235-319)||(3815137-3815221)
chr6 (237-309)||(6024234-6024306)
chr6 (263-319)||(14975168-14975224)
chr6 (256-311)||(17448323-17448378)
chr6 (256-311)||(24097580-24097635)
chr6 (256-306)||(4136598-4136648)
chr6 (233-319)||(20400658-20400744)
chr6 (265-319)||(27855528-27855582)
chr6 (266-319)||(22967162-22967215)
chr6 (266-319)||(23821178-23821231)
chr6 (195-295)||(1941870-1941970)
chr6 (235-310)||(28007628-28007701)
[»] scaffold0057 (2 HSPs)
scaffold0057 (176-309)||(46832-46965)
scaffold0057 (192-319)||(24789-24911)
[»] chr4 (55 HSPs)
chr4 (192-317)||(19027841-19027966)
chr4 (220-315)||(47443952-47444047)
chr4 (237-319)||(16408665-16408747)
chr4 (176-319)||(44363131-44363276)
chr4 (227-311)||(39077848-39077930)
chr4 (199-319)||(5648250-5648369)
chr4 (175-319)||(6430626-6430769)
chr4 (176-319)||(48598826-48598967)
chr4 (220-319)||(5306709-5306807)
chr4 (194-317)||(17043413-17043536)
chr4 (192-311)||(37494850-37494969)
chr4 (176-318)||(30639372-30639513)
chr4 (220-316)||(9832358-9832452)
chr4 (235-319)||(11054208-11054290)
chr4 (199-319)||(7385500-7385620)
chr4 (178-319)||(21646955-21647098)
chr4 (199-319)||(25463113-25463233)
chr4 (236-319)||(7038044-7038126)
chr4 (176-293)||(20639659-20639777)
chr4 (176-319)||(20224975-20225116)
chr4 (220-319)||(47528575-47528672)
chr4 (176-319)||(23501784-23501923)
chr4 (220-311)||(35567169-35567260)
chr4 (220-319)||(54967012-54967110)
chr4 (176-319)||(16911553-16911698)
chr4 (177-318)||(29207900-29208039)
chr4 (199-309)||(40915830-40915939)
chr4 (192-309)||(14983835-14983952)
chr4 (205-317)||(41018824-41018935)
chr4 (175-292)||(7909280-7909397)
chr4 (176-278)||(25629081-25629183)
chr4 (265-319)||(54730240-54730294)
chr4 (194-298)||(9987853-9987957)
chr4 (231-319)||(10379999-10380086)
chr4 (265-317)||(30352681-30352733)
chr4 (265-317)||(30690273-30690325)
chr4 (243-299)||(39029129-39029185)
chr4 (194-286)||(51865057-51865149)
chr4 (236-319)||(54175054-54175137)
chr4 (236-310)||(30581527-30581602)
chr4 (256-319)||(42164230-42164292)
chr4 (266-317)||(49938681-49938732)
chr4 (257-319)||(487217-487279)
chr4 (244-298)||(21489099-21489153)
chr4 (255-317)||(23580288-23580350)
chr4 (257-299)||(36589754-36589796)
chr4 (235-317)||(47441590-47441672)
chr4 (265-311)||(54640429-54640475)
chr4 (178-319)||(10660395-10660538)
chr4 (178-319)||(10874540-10874683)
chr4 (236-317)||(25343180-25343261)
chr4 (268-317)||(30496413-30496462)
chr4 (256-317)||(43035241-43035302)
chr4 (256-319)||(14590828-14590892)
chr4 (243-286)||(20405110-20405154)
[»] scaffold0187 (2 HSPs)
scaffold0187 (220-319)||(10095-10192)
scaffold0187 (220-319)||(20423-20520)
[»] scaffold0311 (1 HSPs)
scaffold0311 (192-319)||(10801-10928)
[»] scaffold0258 (1 HSPs)
scaffold0258 (176-319)||(13025-13167)
[»] scaffold0254 (1 HSPs)
scaffold0254 (237-319)||(4148-4230)
[»] scaffold0168 (1 HSPs)
scaffold0168 (176-319)||(30570-30711)
[»] scaffold0223 (1 HSPs)
scaffold0223 (267-319)||(11122-11174)
[»] scaffold0036 (1 HSPs)
scaffold0036 (235-319)||(35077-35162)
[»] scaffold1176 (1 HSPs)
scaffold1176 (267-319)||(1677-1729)
[»] scaffold0167 (1 HSPs)
scaffold0167 (215-319)||(23590-23694)
[»] scaffold0031 (1 HSPs)
scaffold0031 (266-311)||(43128-43173)
[»] scaffold0015 (1 HSPs)
scaffold0015 (176-299)||(48635-48756)
[»] scaffold0005 (1 HSPs)
scaffold0005 (256-319)||(226486-226550)


Alignment Details
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 12315478 - 12315858
Alignment:
Q  1 tcatcacacaatacgggactaataatacccccaatagggacgaaatcctaagtaacatacacaatacaacaattcccactaacacaataaattataatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12315478 tcatcacacaatacgggactaataatacccccaatagggacgaaatcctaagtaacatacacaatacaacaattcccactaacacaataaattataatgt 12315577  T
Q  101 ctctatacatgtagtactataagatataccttccctatattagcaaccacaatttaaagcaatgctgtcttaattaagggcaacccgatttactaaaact 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  12315578 ctctatacatgtagtactataagatataccttccctatattagcaaccacaatttaaagcaatgctgtcttaattaagggcaatccgatacactaaaact 12315677  T
Q  201 cccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaact 300  Q
    | |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||| || ||||||||||    
T  12315678 ctcgcatacgtatagtctaggaaggagtctcactatttggtgtattgtacacagtcttaccctgtttttta-ataagaagctgtttccatgacttgaact 12315776  T
Q  301 cgtgacctttcggtcacattcccttaattattgcattcatattcagataactccacaacagtttcaggctcaccttccctta 382  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12315777 cgtgacctttcgatcaaattcccttaattattgcattcatattcagataactccacaacagtttcaggctgaccttccctta 12315858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 8455317 - 8455460
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| |||| |||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||| |||||||||    
T  8455317 aagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacaca 8455416  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||| | |||||||    
T  8455417 agaggctgtttccaggacttgaacccgtgaccttccagtcacat 8455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 10543834 - 10543689
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||  ||| |||||||| ||  ||||||||||||||||||    
T  10543834 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 10543735  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| || |||| |||||||||||| ||||||||||| |||||||    
T  10543734 caagaggccgtttccaggacttgaacccgtgacctttcagtcacat 10543689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 10546297 - 10546153
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgtt-ttttacac 274  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  ||||||||||| ||||| ||    
T  10546297 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatac 10546198  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | ||||| |||||||||||| ||||||||||| |||||||    
T  10546197 aagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 14444846 - 14444719
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| ||| |||||||  |||||||||||||| |||||||| ||||||| ||||    
T  14444846 actaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgttttt-acacaagaggctgtttccagg 14444748  T
Q  292 acttgaactcgtgacctttcggtcacatt 320  Q
    |||||||| ||||||||| | ||||||||    
T  14444747 acttgaacccgtgaccttccagtcacatt 14444719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 32781312 - 32781424
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||| ||  |||| |||||| ||| ||| ||||||| |||||||| || |||||||||||||||||||||||| | ||||| |  ||||||||    
T  32781312 ctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaa 32781411  T
Q  299 ctcgtgacctttc 311  Q
    |||||||||||||    
T  32781412 ctcgtgacctttc 32781424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 14530454 - 14530309
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| ||||||||  |  |||||||||||||||| |    
T  14530454 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttata 14530355  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  14530354 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat 14530309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 21779262 - 21779403
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||| |||||||||||||  |||||    
T  21779262 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt--acaca 21779359  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||| | |||||||||||| ||||||||||| |||||||    
T  21779360 agaggctgtctccaggacttgaacccgtgacctttcagtcacat 21779403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 39914307 - 39914450
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctg-ttttttacac 274  Q
    ||||||||||||||  |||||| ||||||||||||||  ||| ||||||| ||| ||| ||| ||| |||||||||||  ||||||||| ||||||||||    
T  39914307 aagggcaacccgatgcactaaagctcccgcatacgcagggtc-aggaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacac 39914405  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | ||||| ||| |||||| | ||||||||| | |||||||    
T  39914406 aagaggttgtttccagtacttgatcccgtgaccttccagtcacat 39914450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 11514553 - 11514427
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||| |||||| ||| ||| ||||||| |||||||| ||  |||||  |||||||||||||||| ||||||| ||||    
T  11514553 actaaagctcccgcatacgcagggtctgggaagg-gtcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccagg 11514455  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    | |||||| ||||||||| | |||||||    
T  11514454 agttgaacccgtgaccttccagtcacat 11514427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 24200686 - 24200769
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||| |||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacat 24200769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 31158455 - 31158585
Alignment:
Q  191 tactaaaactcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttc 288  Q
    ||||||| ||||||||||||||  |||| |||||| ||| ||| ||||  ||| |||||||  ||||||||||||||||||||| ||||| ||||||||     
T  31158455 tactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttg 31158554  T
Q  289 aggacttgaactcgtgacctttcggtcacat 319  Q
    | ||||| ||| | ||||||||| |||||||    
T  31158555 aagactttaacccttgacctttcagtcacat 31158585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 19615065 - 19614983
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||| || ||||||||||||||||| |||||| | |||||  ||||||||||| ||||||||||| |||||||    
T  19615065 ttggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtcacat 19614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 9671313 - 9671180
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||  |||||||||    
T  9671313 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9671216  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||| ||||||| ||||| |||||| |||||| ||||    
T  9671215 agaggctgtttccaggatttgaacccgtgacatttc 9671180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 12023979 - 12024062
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  12023979 atttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 12024062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 17896394 - 17896250
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgtttttt-acac 274  Q
    ||||||||| ||||  |||||| ||||| ||||||||  |||   ||||| ||| ||| |||||||||||||||| ||  |||||||| |||||| ||||    
T  17896394 aagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacac 17896295  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | |||||  ||||||||||  |||||||||||||||||||    
T  17896294 aagaggttgtttctaggacttgaatccgtgacctttcggtcacat 17896250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 19977774 - 19977858
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||| |||| ||| ||||||||| |||| ||||||| ||| |||||||| |||||||||||||||||||    
T  19977774 atttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacat 19977858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 29419970 - 29420030
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtca 29420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 31821403 - 31821485
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||||||| |||||||| ||||||||||| |  |||||||  | ||||||||||||||||||||| |||||||    
T  31821403 atttggtgtattgtacacaaccttaccctattttttacacacg--gctgtttctacgacttgaactcgtgacctttcagtcacat 31821485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 17380297 - 17380380
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| ||||| |||||| |||||||||||| | |||||||| | ||||| || ||||||||| |||||||||||||||||||    
T  17380297 atttggtgtattgcacacaaccttaccctgtttat-acacaagaggttgtttccaagacttgaacccgtgacctttcggtcacat 17380380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 23145760 - 23145840
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||| |||||||| ||  ||||| |||||||||||||||||  ||||||||| ||||||||| ||||||||||| |||||    
T  23145760 ttggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23145840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 23557550 - 23557630
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||| |||||||| ||  ||||| |||||||||||||||||  ||||||||| ||||||||| ||||||||||| |||||    
T  23557550 ttggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23557630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 21377118 - 21377217
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| |||||||  ||||||| ||  ||||||||||||||||||||||| | |||||  | ||||||||||||| ||||||| |||||||    
T  21377118 ggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacat 21377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 25641591 - 25641493
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| ||||||| |||||||| |||  ||||||||||||  |||||| | ||||||| |||||||||||| ||||||||||| |||||||    
T  25641591 ggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttc-acacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacat 25641493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 17668077 - 17667993
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  ||||||||| ||||||||||||| | | ||| |||||||||||| ||||||||| | |||||||    
T  17668077 atttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacat 17667993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 17705567 - 17705496
Alignment:
Q  238 tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    |||| |||||||||||  ||||| ||||| ||||||||||| || |||| |||||||||||| |||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 17623639 - 17623565
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||||| |||||||| ||  ||||||||| ||||||||||||| | |||||  ||||||||||| |||||||||    
T  17623639 atttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgacctt 17623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 36871625 - 36871509
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  ||||||||| |||| |||||    
T  36871625 aagggcaacccggtgcactaaagctcccgcatacgcag-gtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttcacaca 36871528  T
Q  276 agaagctgttttcaggact 294  Q
    ||| ||||||| |||||||    
T  36871527 agaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 40416933 - 40417015
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||||||  ||| |||||||||||| |||||| | ||||| || ||||||||| ||||||||| | |||||||    
T  40416933 ttggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacat 40417015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 286
Target Start/End: Original strand, 40762235 - 40762345
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||| ||||||||  ||| ||||| | ||| ||| ||||||| ||||||||  |  ||||||| ||||||||||||    
T  40762235 aagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacaca 40762334  T
Q  276 agaagctgttt 286  Q
    ||| |||||||    
T  40762335 agaggctgttt 40762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 5450377 - 5450276
Alignment:
Q  219 aggaaggagtctcactatttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||||| ||| |||  |||||| |||||||| ||  |||||| |||||||| |||||||| | ||||| ||||| |||||| ||||||||||| |||||    
T  5450377 aggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcac 5450278  T
Q  318 at 319  Q
    ||    
T  5450277 at 5450276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 44643634 - 44643513
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttttcaggacttga 297  Q
    ||||||||||||||  |||| |||||| ||| ||| |||||||| ||||||| ||  ||||| ||| ||||||||  |||| ||| |||  || ||||||    
T  44643634 ctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttttacggaagaggctctttctagaacttga 44643535  T
Q  298 actcgtgacctttcggtcacat 319  Q
    || ||||||||||| |||||||    
T  44643534 acacgtgacctttcagtcacat 44643513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 5841095 - 5841019
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||| ||  |||||||| |||||||||||| | |||||||  ||||||||||| ||||||||| | |||||||    
T  5841095 tattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacat 5841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 7214601 - 7214525
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||| ||  |||||||||| ||||||||||||  |||||| || ||||||||| | ||||||||| |||||||    
T  7214601 tattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacat 7214525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 17471668 - 17471572
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttt 286  Q
    ||||||||||||||||| |||  |||  |||||| ||||||  |||| |||||||||||| || ||||| |||| |||||||||||||| |||||||    
T  17471668 actaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgttt 17471572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 23397809 - 23397757
Alignment:
Q  267 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||| ||||||| |||||||||||| | ||||||||| |||||||    
T  23397809 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacat 23397757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 15296468 - 15296531
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    ||||||||||||||| ||  |||||||||| |||||||||| | ||||||| | ||||||||||    
T  15296468 tttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaac 15296531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 25249739 - 25249881
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||| ||||||||||  ||   ||||||  || ||| ||||||| |||||||| ||  ||||||||| ||| ||||||    
T  25249739 aagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-tttgtacaca 25249837  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||  |||||| || ||||||||| ||||||||| | |||||||    
T  25249838 agagactgtttccatgacttgaacccgtgaccttacagtcacat 25249881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 33795339 - 33795284
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||||||| ||||| | ||||| | |||||||||| |||||||||||    
T  33795339 cttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttc 33795284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 99282 - 99405
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||| ||  ||||  ||||| ||  ||| ||||||| |||||||| ||  ||| || |||||||||||  ||| |||||||  |||    
T  99282 actaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgttttttaca--agaggctgtttctagg 99379  T
Q  292 acttgaactcgtgacctttcggtcac 317  Q
    |||||||| ||||||||||| |||||    
T  99380 acttgaacccgtgacctttcagtcac 99405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 22371144 - 22371059
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacct 308  Q
    |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||   ||| || ||||||| |||||||||||| ||||||||    
T  22371144 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacct 22371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 25079718 - 25079862
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgtttt-ttacac 274  Q
    |||||||||||| |  |||||| |||  |||||||||  |||  |||||| ||| ||| ||| ||| |||||||| ||  |||||| |||||| ||||||    
T  25079718 aagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacac 25079817  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | |||||  | ||||||||| ||||||||| | |||||||    
T  25079818 aagaggttgtttctaagacttgaacccgtgaccttccagtcacat 25079862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 44604908 - 44604845
Alignment:
Q  255 tcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||  |||||||| | |||||||    
T  44604908 tcttaccctgttttt-acacaagaggttgtttccaggacttgaacctgtgaccttccagtcacat 44604845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 59113 - 58968
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttaca 273  Q
    ||||||||||||||  |||||| |||||||||||||| ||||| |||||| ||| ||| ||||  ||| |||||||| || ||||||||||||||||| |    
T  59113 aagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttata 59014  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  59013 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat 58968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 12914059 - 12914180
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||| |||||| ||||||| ||||||| |||||||| |   ||||||||||||||||||||||| ||||||| |||||||||||    
T  12914059 ctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaa 12914158  T
Q  299 ctcgtgacctttcggtcacatt 320  Q
    || |||||||||||||||||||    
T  12914159 cttgtgacctttcggtcacatt 12914180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 8247706 - 8247833
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||| ||||||||||||||  |||  |||||||||| ||| |||  |||| |||||||| ||| ||||||||||||||||||||||| ||||||| ||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagg 8247805  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||| ||||||||||| |||||||    
T  8247806 acttgaacccgtgacctttcagtcacat 8247833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 40272813 - 40272956
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||||||||    
T  40272813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 40272912  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| | ||||| |||||||||||| | ||||||| | |||||||    
T  40272913 agaggttgtttccaggacttgaacccatgaccttccagtcacat 40272956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 13628791 - 13628936
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  |||||||||||| |||||    
T  13628791 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 13628890  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  13628891 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat 13628936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 7943130 - 7943003
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||| |||| | ||||  || ||| ||||| | |||||||| || ||||||||||||||||| |||||| ||||||| ||||    
T  7943130 actaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccagg 7943031  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||  ||||||||| | |||||||    
T  7943030 acttgaatccgtgaccttccagtcacat 7943003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 13730666 - 13730748
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  13730666 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 13730748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 30928209 - 30928291
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||| ||||||| |||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  30928209 ttggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 30928291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 516568 - 516422
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt---ggtatattgtacacaatcttaccctgttttttac 272  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| | | ||||   ||| |||||| | ||  |||||||||||||||||    
T  516568 aagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttac 516469  T
Q  273 acaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  516468 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 39203670 - 39203529
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||| |||||||||  |||||||||    
T  39203670 aagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 39203573  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| |||||||  |||||||||||  |||||||||| |||||||    
T  39203572 agaggctgtttcaaggacttgaacctgtgacctttcagtcacat 39203529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 46421054 - 46421181
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  ||||||||||||||||||||||| ||||||| ||||    
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 46421153  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||| ||||||||||  |||||||    
T  46421154 acttgaacccgtgacctttaagtcacat 46421181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 26869862 - 26869720
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  || ||| ||||||||||||||| |||  | |||| ||| ||| ||||||| |||||||| ||  |||||||||||||| ||||     
T  26869862 aagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacc 26869764  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||||||||||||  |||||||||| |||||||    
T  26869763 agaggctgtttccaggacttgaacctgtgacctttcagtcacat 26869720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 34420660 - 34420786
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag 290  Q
    |||||| ||||| ||||||||  |||  |||||| ||| ||| |||| ||| ||| |||| ||  ||||||||||||||||||||||| ||||||| |||    
T  34420660 actaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccag 34420759  T
Q  291 gacttgaactcgtgacctttcggtcac 317  Q
    ||||||||| ||||||||||| |||||    
T  34420760 gacttgaacccgtgacctttcagtcac 34420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 26573267 - 26573142
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||| ||||||||||  |||  ||| || ||| ||| | ||||| |||||||| ||  |||||||||||||||||||| || ||||||| ||||    
T  26573267 actaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccagg 26573168  T
Q  292 acttgaactcgtgacctttcggtcac 317  Q
    |||||||| ||||||||||| |||||    
T  26573167 acttgaacccgtgacctttcagtcac 26573142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 4495724 - 4495808
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  ||||||||||||||||||||| | ||| |||||||||||||||| ||||||||| | |||||||    
T  4495724 atttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacat 4495808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 319
Target Start/End: Complemental strand, 22609922 - 22609779
Alignment:
Q  175 taagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||| |  ||| || ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||| ||||||||    
T  22609922 taagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac 22609824  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| ||||||| || ||||||||| ||| ||||| | |||||||    
T  22609823 aagaggctgtttccaagacttgaacccgttaccttacagtcacat 22609779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 29366784 - 29366866
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||  |||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||  |||||||    
T  29366784 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacat 29366866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 1217244 - 1217111
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| | | ||||||| |||||||| ||  |||||||||||||  |||||    
T  1217244 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgtttt--acaca 1217147  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||| ||||||| |||||||||||| |||||||||||    
T  1217146 agaggctgtttccaggacttgaacccgtgacctttc 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 6411839 - 6411954
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||| |||||| ||| ||  ||||||| |||||||| ||  ||||||||| ||||||||||||| ||||||| || |    
T  6411839 actaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttacaag 6411937  T
Q  292 acttgaactcgtgacct 308  Q
    |||||||| | ||||||    
T  6411938 acttgaacccatgacct 6411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 10795447 - 10795554
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttg 296  Q
    ||||||||||||||  ||| ||||||| ||| ||| ||||  ||| |||||||| ||  |||||||||| |||||||||||| ||||||| |||||||||    
T  10795447 ctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 10795546  T
Q  297 aactcgtg 304  Q
    ||| ||||    
T  10795547 aacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 299
Target Start/End: Complemental strand, 31593003 - 31592882
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||||||| ||| ||||||| |||||||| ||  |||||||||  |||||||||    
T  31593003 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 31592906  T
Q  276 agaagctgttttcaggacttgaac 299  Q
    ||| ||||||| ||||||||||||    
T  31592905 agaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 33926223 - 33926096
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatt-tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag 290  Q
    |||||| ||| |||||| |||  ||| ||||||| ||| ||| ||| |||| |||||||||||  |||||||||||||| |||||||| ||| ||| |||    
T  33926223 actaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgttttt-acacaagaggctatttccag 33926125  T
Q  291 gacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||| | ||||||||| |||||||    
T  33926124 gacttgaacccatgacctttcagtcacat 33926096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 10870033 - 10870095
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10870033 cttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10870095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 35417988 - 35417929
Alignment:
Q  260 ccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||| || |||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacat 35417929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 54032640 - 54032703
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| | |||||||    
T  54032640 cttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacat 54032703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 14987052 - 14986990
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| ||||||||||||    
T  14987052 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 22122917 - 22123059
Alignment:
Q  175 taagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||| |  |||| | ||| |||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  ||||    
T  22122917 taagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acac 22123014  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||  |||||| |||||||||||| || |||||||| |||||||    
T  22123015 aagagactgtttccaggacttgaacccgcgacctttcagtcacat 22123059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 45620890 - 45620971
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgtttt-ttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||| |||||||| ||  ||||||||||||| |||||||||| ||||||| ||| |||||||| ||||||||||| |||||    
T  45620890 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcac 45620971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 53062112 - 53062051
Alignment:
Q  258 taccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||| ||||| || ||||||| |||||||||||| ||||||||||| |||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacat 53062051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 53996582 - 53996707
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag 290  Q
    |||||| ||||| ||||||||  |||  |||||| ||| ||| |||| ||| |||||||  ||  ||||||||||||||||||||||| | ||||| ||     
T  53996582 actaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccac 53996681  T
Q  291 gacttgaactcgtgacctttcggtca 316  Q
    ||||||||| ||||||||||| ||||    
T  53996682 gacttgaacacgtgacctttcagtca 53996707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 54484847 - 54484730
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctg-ttttttacac 274  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||| || ||||||||||    
T  54484847 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacac 54484748  T
Q  275 aagaagctgttttcagga 292  Q
    |||| ||||||| |||||    
T  54484747 aagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 9607279 - 9607216
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||   ||||||||| |||||||    
T  9607279 cttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacat 9607216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 311
Target Start/End: Complemental strand, 19731142 - 19731023
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| |||| |||||| || ||||| |||| | ||| ||| | | ||| |||||||| ||| |||||| |||||||||||||||| ||| ||| ||||    
T  19731142 actaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctatttccagg 19731043  T
Q  292 acttgaactcgtgacctttc 311  Q
    ||||| |  |||||||||||    
T  19731042 acttgcatccgtgacctttc 19731023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 55401272 - 55401209
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    |||||| |||| ||| || ||||| |||||||||||||||||| ||||||| ||||||||||||    
T  55401272 tttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaac 55401209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 5173811 - 5173864
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  5173811 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 5173864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 7696947 - 7697029
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  |||||||||||||  ||||||||  |||||| |||||||||||| ||||||||||  |||||||    
T  7696947 atttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgtgaccttttagtcacat 7697029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 33235621 - 33235552
Alignment:
Q  243 tattgtacacaatcttaccctgtt-ttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||| |||||||||||| |||||||||||| ||| ||| || || ||||||| ||||||||||    
T  33235621 tattgtacacagtcttaccctgtttttttacacaagaggctctttacacgatttgaacttgtgacctttc 33235552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 45948855 - 45948972
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||   ||||| ||| ||| | ||||| |||||||  ||  |||||||| |||||||||||||| | ||||| ||||    
T  45948855 actaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccagg 45948954  T
Q  292 acttgaactcgtgacctt 309  Q
    | |||||| |||||||||    
T  45948955 aattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 52428533 - 52428614
Alignment:
Q  231 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag-gacttgaactcgtgacctttc 311  Q
    ||||||||||| |||||||| ||  |||||||||| |||||||||||| |||| || ||| ||||| ||| |||||||||||    
T  52428533 cactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttc 52428614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 12525483 - 12525423
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||||  |||||||||| ||||    
T  12525483 cttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtca 12525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 39212079 - 39212003
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||| || ||||||| |||| ||||||||||| | | ||| |||||||||||| |||||| |||| |||||||    
T  39212079 tattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacat 39212003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 1121286 - 1121361
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||| |||||||| || ||| ||| | ||| |||||||||||| ||||| |||||||| ||| |||||||||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttc 1121361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 45139559 - 45139622
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||| |||||||||||| | ||||| ||  |||||||| ||||||||||| |||||||    
T  45139559 cttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacat 45139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 45786277 - 45786328
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgtttt 287  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| ||||||||    
T  45786277 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttt 45786328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 54374362 - 54374488
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag 290  Q
    |||||| |||||||||| |||  |||  |||||| ||| ||| |||| |||  ||||||| ||  |||||||| |||||||||||||| | ||||| ||     
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaa 54374461  T
Q  291 gacttgaactcgtgacctttcggtcac 317  Q
    |||||||||  |||||||||| |||||    
T  54374462 gacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 16735570 - 16735454
Alignment:
Q  202 ccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactc 301  Q
    |||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||| ||||  |||||| |||||||  ||||||||||| |    
T  16735570 ccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttctacaagaggctgtttcgaggacttgaaccc 16735472  T
Q  302 gtgacctttcggtcacat 319  Q
    ||||| || | |||||||    
T  16735471 gtgacgttacagtcacat 16735454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 25944565 - 25944484
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||| ||  ||| ||| ||||||||||| ||| || |||| |||||||||||| | ||||||||| |||||    
T  25944565 tttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcac 25944484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 43114950 - 43114995
Alignment:
Q  256 cttaccctgtttt-ttacacaagaagctgttttcaggacttgaact 300  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||    
T  43114950 cttaccctgtttttttacacaagaggctgtttccaggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 49013537 - 49013586
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttt 286  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| |||||||    
T  49013537 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 49013586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 52926305 - 52926354
Alignment:
Q  270 tacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  52926305 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 52926354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 9276361 - 9276313
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctg 283  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| ||||    
T  9276361 atttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 19751667 - 19751599
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||| ||| |||||| || ||||||||||||| ||| ||| ||||||||| |  |||||||||||    
T  19751667 tattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctttc 19751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 28817627 - 28817770
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    ||||||||||||||  |||||| ||||||||||||||  |||  |||||| ||| ||| ||| ||| |||||||| ||  ||||||||||||||||||||    
T  28817627 aagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacaca 28817726  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||| | |||||||    
T  28817727 agaggctgtttccaggacttgaacccgtgaccttccagtcacat 28817770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 35261813 - 35261670
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||||||||||||  ||| ||||||| ||| ||| ||||||| |||||||| ||| ||||||||||||||||||||    
T  35261813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacaca 35261714  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||  |||||| |||| ||||||| ||||||||| | |||||||    
T  35261713 agagactgtttccagggcttgaacccgtgaccttccagtcacat 35261670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 36720914 - 36720787
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| || |||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||||||||||| ||||||| ||||    
T  36720914 actaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 36720815  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||| ||||||||| | |||||||    
T  36720814 acttgaacccgtgaccttccagtcacat 36720787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 311
Target Start/End: Original strand, 39460995 - 39461132
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||||||| |||  |||| |||||||| ||  ||||| ||||||||||||    
T  39460995 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttaca 39461094  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||| ||||||| |||||||||||| |||||||||||    
T  39461095 caagaggctgtttccaggacttgaacccgtgacctttc 39461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 2626633 - 2626510
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgtttttt---acacaagaagctgttttcaggactt 295  Q
    |||||||||| |||  |||| |||||| ||| ||  ||||||| |||||||| || ||||||||||||||||   |||||||| ||||||| ||||||||    
T  2626633 ctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggactt 2626534  T
Q  296 gaactcgtgacctttcggtcacat 319  Q
    |||| |||||||||||||||||||    
T  2626533 gaacccgtgacctttcggtcacat 2626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 309
Target Start/End: Complemental strand, 44530267 - 44530150
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  ||| ||||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||||||||||| | ||||| || |    
T  44530267 actaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaag 44530168  T
Q  292 acttgaactcgtgacctt 309  Q
    |||||||| |||||||||    
T  44530167 acttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 318
Target Start/End: Original strand, 29521702 - 29521828
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||| ||| ||  || ||| ||||||| |||||||| ||  |||||||||||||||| |||||| ||||||| ||||    
T  29521702 actaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccagg 29521801  T
Q  292 acttgaactcgtgacctttcggtcaca 318  Q
    |||||||| ||||||||| | ||||||    
T  29521802 acttgaacccgtgaccttccagtcaca 29521828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 17823651 - 17823567
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||| ||| || ||||| |||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  17823651 atttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacat 17823567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 18164821 - 18164903
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  18164821 tttggtgtattgtacgcaaccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 18164903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 309
Target Start/End: Complemental strand, 45071399 - 45071266
Alignment:
Q  175 taagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||| |  ||| || ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||| ||||||||    
T  45071399 taagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac 45071301  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctt 309  Q
    |||| ||||||| ||| |||||||| |||||||||    
T  45071300 aagaggctgtttccagaacttgaacccgtgacctt 45071266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 5135313 - 5135418
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||| |||||||||  |||  |||||| ||| ||| ||||||| |||||||||||  |||||||| |||||||||||||| ||||||| |||||||||||    
T  5135313 ctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaa 5135412  T
Q  299 ctcgtg 304  Q
    | ||||    
T  5135413 cccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 12670274 - 12670392
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||    
T  12670274 ctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaa 12670371  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||||| |||||||    
T  12670372 cccgtgacctttcagtcacat 12670392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 13160812 - 13160693
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||| |||||||| |||||||  ||||||||||    
T  13160812 ctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttctaggacttgaa 13160714  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||| | |||||||    
T  13160713 cccgtgaccttacagtcacat 13160693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 22598267 - 22598151
Alignment:
Q  200 tcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    |||||||||||||  |||  |||| | ||||||| | ||||| ||||||||| |  ||||||||||||||||||||||| | ||||| ||||| ||||||    
T  22598267 tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaac 22598168  T
Q  300 tcgtgacctttcggtca 316  Q
     ||||||||||| ||||    
T  22598167 ccgtgacctttcagtca 22598151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 20869560 - 20869640
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||||||  |||||||||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  20869560 ttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 20869640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 6760876 - 6760823
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  6760876 cttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 12626024 - 12625891
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgtt-ttttacac 274  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  ||| || ||| ||| ||||||| |||||||  || |||||||||||| ||||||||    
T  12626024 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacac 12625925  T
Q  275 aagaagctgttttcaggacttgaactcgtgacct 308  Q
    |||| | ||||| |||||||||| | ||||||||    
T  12625924 aagaggttgtttccaggacttgagcccgtgacct 12625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 20284086 - 20284217
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgtttttt--acacaagaagctgtttt 287  Q
    |||||||||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  |||||||| ||||||  | |||||| |||||||     
T  20284086 actaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttc 20284185  T
Q  288 caggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||| ||||||||||| |||||||    
T  20284186 caggacttgaacccgtgacctttcagtcacat 20284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 44781567 - 44781648
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||||||  |||||||||| |||||||||||| | ||||| |||||||||||| ||||| ||||| |||||    
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcac 44781648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 30454098 - 30454239
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| ||| |||| ||  |||||| ||||||  |||||    
T  30454098 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgtttt--acaca 30454195  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||||| |||||||    
T  30454196 agaggctgtttccaggacttgaacccgtgacctttcagtcacat 30454239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 389720 - 389642
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgtttttt--acacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||| |||||||| ||| |||||||||||||||  |||||||| | ||||| |||||||||||| |||||||||||    
T  389720 atttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 21070714 - 21070846
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactat--ttggtatattgtacacaatcttaccc---tgttttttacacaagaagctgttt 286  Q
    |||||||||||||||||||||  |||  |||||| ||| ||| ||  ||||| |||||||| ||  |||||||   | ||||||| |||||| |||||||    
T  21070714 actaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggctgttt 21070813  T
Q  287 tcaggacttgaactcgtgacctttcggtcacat 319  Q
     |||||||||||| ||||||||||| |||||||    
T  21070814 ccaggacttgaacccgtgacctttcagtcacat 21070846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 311
Target Start/End: Complemental strand, 36918202 - 36918123
Alignment:
Q  232 actatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||||| |||||||||||  |||||||||||||||||| |||||  ||||| ||| ||||||||  ||||||||||    
T  36918202 actatttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttc 36918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 8483956 - 8484062
Alignment:
Q  193 ctaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagga 292  Q
    ||||| ||||||||||||||  |||| ||| || ||| ||| | ||||| |||||||| ||  ||| ||||||||||||||||||| | ||||| |||||    
T  8483956 ctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccagga 8484055  T
Q  293 cttgaac 299  Q
    |||||||    
T  8484056 cttgaac 8484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 29877205 - 29877111
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 293  Q
    ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||||||||| | ||||||| ||||||    
T  29877205 ctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 26954206 - 26954133
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||| |||||||| ||  ||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||    
T  26954206 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 30962857 - 30962909
Alignment:
Q  259 accctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  30962857 accctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttc 30962909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 11748369 - 11748290
Alignment:
Q  240 gtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||| |  |||||||||| |||||||| |||| ||||||| || ||||||||| |||||| |||| |||||||    
T  11748369 gtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacat 11748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 28407469 - 28407407
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  28407469 cttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 28407407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 7136591 - 7136673
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||  ||||||||| ||||||||||||| | ||||| |||||||||||| | ||||||| | |||||||    
T  7136591 ttggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacat 7136673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 8897783 - 8897908
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 293  Q
    |||| |||||||||| |||  |||  |||||| ||| ||| ||||||| ||||||||  |  |||||||| |||||||||||||  | ||||| ||||||    
T  8897783 taaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggac 8897882  T
Q  294 ttgaactcgtgacctttcggtcacat 319  Q
    || ||| ||||||||| | |||||||    
T  8897883 ttcaacccgtgaccttgctgtcacat 8897908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 42083760 - 42083841
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||||||| ||||| ||  ||| |||  |||||||||||| | ||||||| |||||||||||| ||||||||||| |||||    
T  42083760 tttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcac 42083841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 14018037 - 14018105
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||| || ||| ||||||||||||||||||||  |||||| || ||||||||| | |||||||||    
T  14018037 tattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttc 14018105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 299
Target Start/End: Complemental strand, 5689749 - 5689642
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||| ||||||||| ||   |||||| ||  ||| ||||||| |||||||| ||  ||||||||| ||||||||||||| ||| ||| || |    
T  5689749 actaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaag 5689650  T
Q  292 acttgaac 299  Q
    ||||||||    
T  5689649 acttgaac 5689642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 25250595 - 25250513
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||  | |||||| |||||||||||| | ||||||| ||||||||||||  |||||||| | |||||||    
T  25250595 ttggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacat 25250513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 24365083 - 24365204
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttttcaggacttga 297  Q
    ||||| ||||||||  |||  |||||| ||| ||| ||||||| |||||| | ||  ||||||||| |||||||||||||| |||||||  ||| |||||    
T  24365083 ctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttga 24365182  T
Q  298 actcgtgacctttcggtcacat 319  Q
    || |||||| |||  |||||||    
T  24365183 acccgtgacattttagtcacat 24365204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 31457217 - 31457172
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||    
T  31457217 tttttacacaagaggttgtttacaggacttgaacccgtgacctttc 31457172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 35105995 - 35105922
Alignment:
Q  238 tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||| |||||||| ||  ||||| || | |||||||||||| | ||||| |||||||||||| |||||||||||    
T  35105995 tggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttc 35105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 44742580 - 44742653
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    |||||| |||||||| ||  |||||||||||||||||||| ||   ||||| ||| |||||||||| |||||||    
T  44742580 tttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgacctt 44742653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 23000264 - 23000360
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| ||||||| |||||||   || |||||| |||||| ||||||||| ||||||| ||||||||  || ||||||||||| |||||||    
T  23000264 ggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttt-tacacaagaggctgtttccaggactt--acccgtgacctttcagtcacat 23000360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 46247954 - 46248097
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| || |||||||||||||||||||||    
T  46247954 aagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 46248053  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| || ||||||||| |||||| |||| |||||||    
T  46248054 agaggctgtttccaagacttgaacccgtgacatttcagtcacat 46248097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 18724605 - 18724689
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  18724605 atttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 18724689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 14617179 - 14617052
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| |||||||||| |||  |||  ||||||  || ||| ||||||| |||||||| ||| |||||| |||| ||||||||||| ||||||| ||||    
T  14617179 actaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccagg 14617080  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||||||||| |||||||    
T  14617079 acttgaactcgtgacctttcagtcacat 14617052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 23768337 - 23768464
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||| |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||||||||||| ||||||| || |    
T  23768337 actaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatg 23768436  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    ||||||||  |||||||| | |||||||    
T  23768437 acttgaacctgtgaccttacagtcacat 23768464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 10668384 - 10668239
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  | |  |||||| ||| ||| |||  |||| |||||||| ||| |||||| |||||||||||    
T  10668384 aagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttaca 10668285  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10668284 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 46991959 - 46991818
Alignment:
Q  178 gggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaag 277  Q
    |||||||||| |  |||||| ||||| ||||||||  |||  |||||| ||| ||| ||| ||| |||||||||||  ||||||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaag 46991860  T
Q  278 aagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    | | ||||| |||||||||||| ||||||||| | |||||||    
T  46991859 aggttgtttccaggacttgaacccgtgaccttccagtcacat 46991818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 35005282 - 35005139
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| | ||||||||||||  |||  |||||| ||| ||| ||||  ||| |||||||  ||  ||||||||||||||||||    
T  35005282 aagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttaca 35005183  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||| |||||||||| ||||||||| ||||||||||| |||||    
T  35005182 caagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 18944803 - 18944657
Alignment:
Q  176 aagggcaacccgatttactaaaa-ctcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttac 272  Q
    |||||||||||| |  ||||||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  |||||||||||||||||    
T  18944803 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttac 18944704  T
Q  273 acaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||||| |||| |||||||  |||||||||| |||||||    
T  18944703 acaagaggctgtttccaggccttgaacctgtgacctttcagtcacat 18944657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 27201806 - 27201661
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttaca 273  Q
    ||||||||||| ||  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||  ||| |||||||| ||  |||||||||||| | |||    
T  27201806 aagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgaca 27201707  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| | ||||||||| |||||||    
T  27201706 caagaggctgtttccaggacttgaacccatgacctttcagtcacat 27201661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 316
Target Start/End: Original strand, 32632581 - 32632697
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  || | |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||| ||||||||| ||||||| |||||||||||    
T  32632581 ctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaa 32632679  T
Q  299 ctcgtgacctttcggtca 316  Q
    | ||||||||||| ||||    
T  32632680 cccgtgacctttcagtca 32632697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 35117829 - 35117910
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||||||  |||||||||| |||||||||||| ||| ||| |||||||||||| ||||||||||| |||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcac 35117910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 47214643 - 47214525
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||| |||||| ||| ||| ||||||| |||||||| ||| |||||||||  ||||| ||||||  |||||| |||||||||||    
T  47214643 ctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttaaacaagagactgtttccaggacttgaa 47214546  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||||| |||||||    
T  47214545 cccgtgacctttcagtcacat 47214525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 4430086 - 4430170
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| || ||||||||||||||||||||||||  ||||||||| ||||| ||| ||||||||| | |||||||    
T  4430086 atttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacat 4430170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 25468287 - 25468399
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||| |||||  |||  || ||||||| |||||||| ||| ||||||||| ||||||||||||| | ||||| |||||||||||    
T  25468287 ctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaa 25468386  T
Q  299 ctcgtgacctttc 311  Q
    | | |||||||||    
T  25468387 cccatgacctttc 25468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 30395790 - 30395862
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  30395790 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 34725099 - 34725240
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| |||| || |||||||| ||  |||||||||||||  |||||    
T  34725099 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgtttt--acaca 34725196  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||||| |||||||    
T  34725197 agaggctgtttccaggacttgaacccgtgacctttcagtcacat 34725240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 20004091 - 20004236
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| |||||||||| ||   |||| |||||| ||| ||| |||  |||| |||||||| ||  |||||| |||||||||||    
T  20004091 aagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20004190  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    | ||| ||||||| |||||||||||| ||||||||| | |||||||    
T  20004191 cgagaggctgtttccaggacttgaacccgtgaccttccagtcacat 20004236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 11596646 - 11596527
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  ||| ||||||| ||| ||| ||||||| |||| ||| ||  |||||||||| |||||||||||| | |||||  ||||||||||    
T  11596646 ctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-ttttacacaagaggttgtttctaggacttgaa 11596548  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | |||||| |||| |||||||    
T  11596547 cccgtgacatttcagtcacat 11596527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 22327185 - 22327113
Alignment:
Q  247 gtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||  ||||||||||||||||||||||| | ||||| |||||||||||| || |||||||| |||||||    
T  22327185 gtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacat 22327113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 22930113 - 22930211
Alignment:
Q  219 aggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 318  Q
    ||||||| ||| ||| ||||||| |||||| ||||| ||||||||||||| ||||||| | ||||||| |||||||||||| | ||||||||| ||||||    
T  22930113 aggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttt-tacacaaaaggctgtttccaggacttgaacccatgacctttcagtcaca 22930210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 41319866 - 41319950
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  |||||||||||||||||||||||  |||||| |||||||| |||  |||||||||| |||||||    
T  41319866 atttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacat 41319950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 6925241 - 6925114
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  | |  |||||| ||| ||| ||| ||| |||||| | ||  |||||||| |||||||||||||| ||| ||| ||||    
T  6925241 actaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccagg 6925142  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||| ||||||||| | |||||||    
T  6925141 acttgaacccgtgaccttccagtcacat 6925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 9939558 - 9939475
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||| || ||| |||||| ||||| ||| |||||| | ||||| |||||||||||||||||||||||| |||||||    
T  9939558 tttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacat 9939475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 309
Target Start/End: Original strand, 27136675 - 27136786
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttga 297  Q
    ||||||||||| |||  |||||||||| ||| ||| |||| ||| |||||||| ||| |||||| |||||||||||||||| | ||||  ||| ||||||    
T  27136675 ctcccgcatacacatgatctaggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttga 27136774  T
Q  298 actcgtgacctt 309  Q
    ||||||| ||||    
T  27136775 actcgtgtcctt 27136786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 45402251 - 45402118
Alignment:
Q  178 gggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacaca-atctt--accctgttttttacac 274  Q
    |||||||||| |  |||||| ||||||||||||||  |||| |||||| ||| ||| ||||||| |||||||| || | |||  |||||| |||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctg-tttttacac 45402153  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctt 309  Q
    |||| ||||||| |||||||||||| ||| |||||    
T  45402152 aagaggctgtttccaggacttgaacccgttacctt 45402118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 50760307 - 50760370
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| |||||||| || |||||||    
T  50760307 cttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacat 50760370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 50812037 - 50811955
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||||||||| |||||| |||   ||||||||||| |||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcac 50811955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 2435848 - 2435929
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||| ||  |||||||| ||||| ||||| || ||||||| |||||||||||| ||||||||||| |||||    
T  2435848 tttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcac 2435929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 12126861 - 12126971
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||||||||||||| ||| |||| ||    
T  12126861 ctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccagaacttaaa 12126958  T
Q  299 ctcgtgacctttc 311  Q
    | |||||||||||    
T  12126959 cccgtgacctttc 12126971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 17470407 - 17470488
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| |||||||  ||||||||||| | ||||| ||| |||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcac 17470488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 20036359 - 20036234
Alignment:
Q  195 aaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttt-tttacacaagaagctgttttcaggac 293  Q
    |||||||| |||||||||  |||  |||||| ||  ||| ||||||| ||||| || |||||||||||| | | |||||||||||   ||||| ||||||    
T  20036359 aaaactcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggac 20036260  T
Q  294 ttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||||||||| |||||||    
T  20036259 ttgaacccgtgacctttcagtcacat 20036234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 35253211 - 35253329
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||||| |||||||  ||||||||||    
T  35253211 ctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttcgaggacttgaa 35253308  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||| ||||| |||||||    
T  35253309 cccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 38478342 - 38478424
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| |||||||  ||||||||||| ||||||||||| |||||||    
T  38478342 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacat 38478424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 4349795 - 4349699
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttac 272  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||||||    
T  4349795 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 318
Target Start/End: Complemental strand, 19701712 - 19701585
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcacta-tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag 290  Q
    |||||| ||||||||||||||  |||  |||||| | | ||| | |||||| |||||||| ||  ||||||  ||||||||||||||| ||||||||||     
T  19701712 actaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttcat 19701613  T
Q  291 gacttgaactcgtgacctttcggtcaca 318  Q
    ||||| ||| |||||| |||| ||||||    
T  19701612 gacttaaacccgtgacatttcagtcaca 19701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 23796606 - 23796507
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| |||| ||||| |||  |||| |||||| ||||||| ||||||| |||||||| ||| |||||  || ||||||||||||| ||||||| ||||    
T  23796606 actaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 25290242 - 25290177
Alignment:
Q  256 cttaccctgttttttacacaagaagc--tgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||||||||||| ||  ||||| || ||||||||| ||||||||||| |||||||    
T  25290242 cttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacat 25290177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 23371221 - 23371141
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    ||||||| |||||||||||| ||| ||| ||||||||| ||||  |||||||  ||||||||||| ||||||||||| ||||    
T  23371221 atttggtgtattgtacacaaccttgccc-gttttttacccaagtggctgtttctaggacttgaacccgtgacctttcagtca 23371141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 45812561 - 45812679
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  || | |||||| ||| ||| ||||||| |||||||  ||  |||||||| ||||  ||||||||  ||||||||||||||||||    
T  45812561 ctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctctttt--acacaagagactgttttcaggacttgaa 45812658  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    |  |||||||||| |||||||    
T  45812659 cctgtgacctttcagtcacat 45812679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 6983858 - 6983951
Alignment:
Q  222 aaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||| ||| ||| ||||||| |||||||| ||  |||||||||||||||| ||  || ||||||| ||||||||||||  |||||||||| |||||    
T  6983858 aaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac--gaggctgtttccaggacttgaacctgtgacctttcagtcac 6983951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 299
Target Start/End: Complemental strand, 30682946 - 30682848
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||  |||||| ||| ||| ||||| | ||| ||||||||||||||| ||||||| |||||||| ||| ||||||||| |||||    
T  30682946 ctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat-gtacacaatcttaccttgttttt-acacaagaggctattttcaggatttgaa 30682849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 31382215 - 31382330
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  | |||| |||||||||| |||  ||| ||||||| ||| ||| ||||||| |||||||| ||  |||| |||| ||||||||||    
T  31382215 aagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacaca 31382313  T
Q  276 agaagctgttttcagga 292  Q
    ||| ||||||| |||||    
T  31382314 agaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 45264416 - 45264536
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag 290  Q
    |||||| |||||||||| |||  ||||  ||||| ||| ||| |||| ||| ||||| |||||  ||||| ||||||||| ||||||| | ||||| |||    
T  45264416 actaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccag 45264515  T
Q  291 gacttgaactcgtgacctttc 311  Q
    |||||||||  ||||||||||    
T  45264516 gacttgaacatgtgacctttc 45264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 8197120 - 8197057
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||||||||||| ||  ||  |||||||||||| ||||||||||| |||||||    
T  8197120 cttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacat 8197057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 33223080 - 33222998
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||| ||| ||| |||||||||| |||||||| ||||||| || ||||| ||  ||||||||||| |||||||    
T  33223080 tttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgtttccatgacttaaatccgtgacctttcagtcacat 33222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 20169157 - 20169207
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 293  Q
    ||||||||||| ||||||| | |||||||||||||| | ||||||||||||    
T  20169157 tattgtacacagtcttacctttttttttacacaagagggtgttttcaggac 20169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 39215020 - 39215094
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 310  Q
    ||||| ||||||||| ||  ||||||| ||||||||||||||| | ||||| ||| ||||||||| | |||||||    
T  39215020 tttggaatattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaacttgggaccttt 39215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 2435983 - 2436035
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||||||||| || | ||||| |||||||||||| ||||||||||| |||||    
T  2435983 ttttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcac 2436035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 15511232 - 15511296
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 320  Q
    ||||||||||||||||||||||| || |||| |||||||| ||   |||||||||| | ||||||    
T  15511232 cttaccctgttttttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacatt 15511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 11617588 - 11617732
Alignment:
Q  175 taagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||| |  ||||||  ||| |||||||||  ||| ||||||| ||| ||| ||||||| |||||||| || ||||||||||||||||||||    
T  11617588 taagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacac 11617687  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | ||||| ||||||||||||  |||||||||| |||||||    
T  11617688 aagaggttgtttccaggacttgaacctgtgacctttcagtcacat 11617732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 23419675 - 23419818
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    ||||||| ||||||  |||||| | |||||| |||||  ||||||||||| ||| ||| ||||||| |||||||| || |||||||||||||||||||||    
T  23419675 aagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 23419774  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||| ||||||||  |||||||||  |||||||    
T  23419775 agaggctgtttccagaacttgaacctgtgaccttttagtcacat 23419818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 19426949 - 19427033
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| || ||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  19426949 atttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacat 19427033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 27629724 - 27629628
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    |||||| ||| ||| ||||||| |||| ||| ||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  27629724 ggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtca 27629628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 7645066 - 7644949
Alignment:
Q  200 tcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||||||  ||| ||||||| ||| ||| |||| ||| |||||||| | ||||||||||||||||||||||||| ||||||| |||||||||||    
T  7645066 tcccgcatacgcagggtc-aggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaa 7644968  T
Q  299 ctcgtgacctttcggtcac 317  Q
    | ||||||||||| |||||    
T  7644967 cccgtgacctttcagtcac 7644949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 8148963 - 8149090
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgtttttta-cacaagaagctgttttcag 290  Q
    |||||||||| |||||||||| ||||| |||||| ||| ||| ||||||| |||||||| ||| |||||||| ||||||| ||||||| |  ||||||||    
T  8148963 actaaaactctcgcatacgca-agtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcag 8149061  T
Q  291 gacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||||| || | |||||||    
T  8149062 gacttgaactcgtgactttgcagtcacat 8149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 35334833 - 35334958
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| |||| |||||||||  |||  |||||| ||| ||| ||| ||| ||||||||||| |||||||||||||||||||| |||  |||||| ||||    
T  35334833 actaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacgaga--ctgtttccagg 35334930  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||||||| | |||||||    
T  35334931 acttgaactcgtgaccttccagtcacat 35334958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 42391101 - 42391242
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  42391101 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 42391198  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||    
T  42391199 agaagctgtttccaggacttgaacccgtgacctttcagtcacat 42391242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 311
Target Start/End: Original strand, 2541036 - 2541155
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  | |  |||||| ||| ||| ||||||| ||| |||| ||  ||||||||||||||||||||||| ||||||| ||||    
T  2541036 actaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccagg 2541135  T
Q  292 acttgaactcgtgacctttc 311  Q
    |||||||| |||||||||||    
T  2541136 acttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 42805597 - 42805515
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  42805597 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 42805515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 32758393 - 32758252
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||||||  |||||||||||||  |||||    
T  32758393 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt--acaca 32758296  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||||||||||||  |||||||||| |||||||    
T  32758295 agaggctgtttccaggacttgaacctgtgacctttcagtcacat 32758252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 43557609 - 43557463
Alignment:
Q  176 aagggcaacccgatttactaaaa-ctcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttac 272  Q
    |||||||||||| |  ||||||| |||||||||||||| ||||  ||| || ||| ||| |||  |||| |||||||| ||  ||||| |||||||||||    
T  43557609 aagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttac 43557510  T
Q  273 acaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||||| |||||||||||| | ||||||||| |||||||    
T  43557509 acaagaggctgtttccaggacttgaacccatgacctttcagtcacat 43557463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 47716532 - 47716450
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  47716532 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 47716450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 7879772 - 7879639
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  ||| || ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||| |||||||||||||    
T  7879772 aagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacaca 7879673  T
Q  276 agaagctgttttcaggacttgaactcgtgacctt 309  Q
    |||   ||||| |||||||||||| |||||||||    
T  7879672 agagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 311
Target Start/End: Original strand, 21172010 - 21172143
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  21172010 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 21172107  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||| ||||||| |||||||||||| |||||||||||    
T  21172108 agaggctgtttccaggacttgaacccgtgacctttc 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 48123508 - 48123620
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||| ||| || |||| ||| ||| ||||||| |||||||  || | |||||||||| ||||||||||| ||||||| |||||||||||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaa 48123607  T
Q  299 ctcgtgacctttc 311  Q
    | | |||||||||    
T  48123608 cccatgacctttc 48123620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 35203513 - 35203438
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||||| || ||||| ||||||||||||||||||   ||||| |||||||||||| |||||||||||    
T  35203513 tttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttc 35203438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 42798803 - 42798660
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    ||||||||||||||  |||| | |||||||||| |||  |||  |||| | ||| ||| ||||||| |||||||| ||  |||||| |||||||||||||    
T  42798803 aagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacaca 42798704  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||  |||||| || ||||||||| ||||||||| | |||||||    
T  42798703 agagactgtttccaagacttgaacccgtgaccttccagtcacat 42798660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 10693097 - 10693215
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||| ||||  |||||||| ||||||| |||||||||||    
T  10693097 ctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttt--acacaagaggctgtttccaggacttgaa 10693194  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||||| |||||||    
T  10693195 cccgtgacctttcagtcacat 10693215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 19266561 - 19266441
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||  ||||||  || ||| ||||||| |||||||| ||  ||||||||||||||||| ||||  ||| |||||||||||||||    
T  19266561 ctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaa 19266462  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | |  |||||||| |||||||    
T  19266461 cccacgacctttcagtcacat 19266441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 46354267 - 46354195
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| | ||||| |||||||||||| |||||||||    
T  46354267 ttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 5180218 - 5180301
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| | ||||||||| ||||||||||||||| |||||||| ||||||| ||| | |||||| | ||||||||| |||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacat 5180301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 14099051 - 14099150
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| ||||||| |||||||| || ||||| |||||||||||||||| | ||| ||| |||||||| ||| | ||||||||| |||||||    
T  14099051 ggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacat 14099150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 14409068 - 14409167
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| ||||||| |||||||| || ||||| |||||||||||||||| | ||| ||| |||||||| ||| | ||||||||| |||||||    
T  14409068 ggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacat 14409167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 15108453 - 15108527
Alignment:
Q  231 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgac 306  Q
    ||||||||| | |||||||||||  |||||| |||||| |||||||||| |||||| |||||||||||||||||||    
T  15108453 cactatttgatgtattgtacacagccttaccttgtttt-tacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 22699031 - 22699114
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||| || ||||||||||||||||||||||||  || ||| |||||||||||| | | ||||||| |||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtcacat 22699114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 33871927 - 33872053
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||| ||||||| ||  |||| |||||| ||| ||| ||||||| |||||||| ||  |||| |||||||| ||||||||| | ||||| ||||    
T  33871927 actaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttt-tacacaagaggttgtttccagg 33872025  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||| || |||||||| |||||||    
T  33872026 acttgaacccgcgacctttcagtcacat 33872053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 34626209 - 34626330
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    ||||||||||||||  |||||| ||||||||||||||  |||  ||||||  || ||| ||||||| ||||| || ||  ||||||||| ||||||||||    
T  34626209 aagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacaca 34626307  T
Q  276 agaagctgttttcaggacttgaa 298  Q
     || ||||||| |||||||||||    
T  34626308 ggaggctgtttccaggacttgaa 34626330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 11741868 - 11741786
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  |||||||| ||||  |||| |||||||||||||||||||||||| | ||||||||| |||||||    
T  11741868 atttggtgtattgtacgcagccttaccctatttt--acactagaagctgttttcaggacttgaacccatgacctttcagtcacat 11741786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 13805212 - 13805093
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  ||| ||||||  ||| ||| ||||||| |||||||||||  |||||||  | |||||||| ||| ||| ||| |||||||||||    
T  13805212 ctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccc-tgttttacaccagaggctatttccaggacttgaa 13805114  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||| ||||||| |||||||    
T  13805113 cccgttacctttcagtcacat 13805093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 18512477 - 18512588
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||  |||||| ||| ||| ||| ||| |||||||| ||  |||||||| |||| ||||||||| | ||||| |||||||||||    
T  18512477 ctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaagatgttgtttccaggacttgaa 18512575  T
Q  299 ctcgtgacctttc 311  Q
    | |||||||||||    
T  18512576 cccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 38262213 - 38262341
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  ||   |||||| ||| ||  ||||||| |||||||  |||  ||||| | ||||||||||||||  |||||| ||||    
T  38262213 actaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccagg 38262312  T
Q  292 acttgaactcgtgacctttcggtcacatt 320  Q
    |||||||| ||||||||| | ||||||||    
T  38262313 acttgaacccgtgaccttccagtcacatt 38262341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 12473378 - 12473303
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||| |||||||| ||  |||||||||||||| |||||||| | ||||| |||||||||||| | |||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttc 12473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 16341332 - 16341277
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||||||||||||| |||||||  || |||||||| |||||||||||    
T  16341332 cttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttc 16341277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 29907473 - 29907410
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| || |||||||||||||| |||||||  ||||||||||| ||||||||||| |||||||    
T  29907473 cttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacat 29907410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 1408547 - 1408469
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||| ||| ||| ||||| | |||||||||||  |||||| |||||||||||||||| ||| ||| |||||||||||    
T  1408547 ggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 18747605 - 18747479
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttttcag 290  Q
    |||||| ||||||||||||||  ||  ||||||| ||| ||| | ||||| |||| ||| ||  ||||||||| |||||||||||| | ||||||| ||     
T  18747605 actaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaa 18747506  T
Q  291 gacttgaactcgtgacctttcggtcac 317  Q
    ||||||| | ||||||||||| |||||    
T  18747505 gacttgatcccgtgacctttcagtcac 18747479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 38604642 - 38604546
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||| ||||||||||||||  |||  | |||| ||||||| ||||||| |||||||| ||  |||||||||| |||||||||||| ||||||| ||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 42476982 - 42476864
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| ||| || ||||||||| ||| ||| ||||||| |||||||| ||  |||||| ||||||  ||||||||  |||||| ||| |||||||    
T  42476982 ctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt--acacaagagactgtttccagaacttgaa 42476885  T
Q  299 ctcgtgacctttcggtcacat 319  Q
      ||||||||||  |||||||    
T  42476884 tccgtgaccttttagtcacat 42476864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 48735123 - 48735265
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||| ||||||  |||||    
T  48735123 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgtttt--acaca 48735220  T
Q  276 agaagctgttttca-ggacttgaactcgtgacctttcggtcacat 319  Q
    ||| | ||||| || |||||||||| ||||||||||| |||||||    
T  48735221 agaggttgtttccaaggacttgaacccgtgacctttcagtcacat 48735265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 28362185 - 28362281
Alignment:
Q  215 gtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||| |||||| ||| ||| ||||||| |||||||| ||  ||||||  ||||||||||||||| || ||||  |||||||||||  ||||||||||    
T  28362185 gtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttc 28362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 31591199 - 31591243
Alignment:
Q  267 ttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  31591199 ttttacacaagaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 42495917 - 42495976
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| ||||||||||| ||||    
T  42495917 cttaccctgttttt-atacaagaggctgtttccaggacttgaacccgtgacctttcagtca 42495976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 47077945 - 47077997
Alignment:
Q  267 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||  |||||| |||||||||||| ||||||||||| |||||||    
T  47077945 ttttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacat 47077997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 7794596 - 7794650
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||| | |||||||    
T  7794596 ttttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacat 7794650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 18327087 - 18327035
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    |||||||||||||| |||||||| ||||||| | |||||||||| |||||||||    
T  18327087 cttaccctgttttt-acacaagaggctgtttccgggacttgaacccgtgacctt 18327035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 19265904 - 19265808
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| ||| ||| ||||||| |||||||| ||  |||||||| ||||| |||||||  ||||| | || ||||||||| ||||||||||| |||||    
T  19265904 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttt-acacaagcggctgtatccaagacttgaacccgtgacctttcagtcac 19265808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 21447636 - 21447591
Alignment:
Q  264 gttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||||    
T  21447636 gttttttacacaagaggctgttttcaagacttgaatccgtgacctt 21447591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 6736964 - 6736889
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||| |||||||  || ||||||| ||||||| | |||||| | |||||| ||||||||||| |||||||||||    
T  6736964 atttggtgtattgtatgcagtcttaccttgttttt-atacaagaggttgttttgaggacttgaacccgtgacctttc 6736889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 32233216 - 32233275
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||| | ||||||||| ||||    
T  32233216 cttaccctgtttt-tacacaagaggttgtttccaggacttgaacccatgacctttcagtca 32233275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 42101967 - 42102019
Alignment:
Q  257 ttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||||||||||||||  |||| ||||||| |||||||||||||  |||||||    
T  42101967 ttaccctgttttttacggaagaggctgtttccaggacttgaacttttgacctt 42102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 42924895 - 42924977
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 318  Q
    |||||| |||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 38879717 - 38879572
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  |||||||||||||||| |    
T  38879717 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 38879618  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  38879617 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat 38879572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 8169985 - 8170126
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  ||| ||||||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  8169985 aagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 8170082  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    | | ||||||| |||||||||||| |||||||||||||||||||    
T  8170083 aaaggctgtttccaggacttgaacccgtgacctttcggtcacat 8170126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 24449024 - 24448881
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| |||| |||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||| |||||||||||    
T  24449024 aagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacaca 24448925  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    | | ||||||| |||||||||||| ||||||||| | |||||||    
T  24448924 aaaggctgtttccaggacttgaacccgtgaccttccagtcacat 24448881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 41014452 - 41014310
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| |||||||||| ||   ||| ||||||| ||| ||| ||||||| |||||||| ||  |||||||||||||| |||||    
T  41014452 aagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acaca 41014354  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||| | |||||||    
T  41014353 agaggctgtttccaggacttgaacccgtgaccttccagtcacat 41014310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 32703556 - 32703415
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  32703556 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 32703459  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||||| |||||||    
T  32703458 agaggctgtttccaggacttgaacccgtgacctttcagtcacat 32703415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 43574723 - 43574609
Alignment:
Q  193 ctaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagga 292  Q
    ||||| ||||||||||||||  |||  |||||| ||| ||| |||||||||||||||| ||  ||||||||||||| |||||||||   ||||| |||||    
T  43574723 ctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccagga 43574624  T
Q  293 cttgaactcgtgacc 307  Q
    ||||||| |||||||    
T  43574623 cttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 24903741 - 24903817
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttg 296  Q
    |||||| ||||||| | |||||  |||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  24903741 ggaaggggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttttcaggacttg 24903817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 4619168 - 4619250
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||| | |||||||    
T  4619168 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacat 4619250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 27328825 - 27328743
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||  |||||||||||||||||||||||  |||||| ||||||||||||  |||||||||| |||||||    
T  27328825 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacat 27328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 16880664 - 16880757
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgtt 285  Q
    |||||| ||||||||||||||| |||  |||||  ||| ||| ||||||| |||||||| ||  ||||||||||||||||||||||| ||||||    
T  16880664 actaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 7097777 - 7097872
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttc 288  Q
    |||||| ||||||||||||||  ||   |||||| ||||||| ||||||| |||||||| ||| ||||||||| ||||||||||||| |||||||||    
T  7097777 actaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctg-tttttacacaagaggctgttttc 7097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 43334277 - 43334193
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||| ||  ||||||||||||||| ||||| || ||||||| |||||||||||| ||||||||||| |||||||    
T  43334277 tttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacat 43334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 299
Target Start/End: Original strand, 19142960 - 19143066
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||| |||  |||||| ||| ||| ||||||| || ||||| ||  ||||||||| ||||||||||||| | ||||| ||||    
T  19142960 actaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttccagg 19143058  T
Q  292 acttgaac 299  Q
    ||||||||    
T  19143059 acttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 22025597 - 22025542
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||    
T  22025597 cttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 34074622 - 34074703
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    ||||||| ||||| || ||| |||||  |||||||||||||||| |||||||  |||||||||||| |||||||||| ||||    
T  34074622 atttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtca 34074703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 22187359 - 22187279
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    |||||| |||||||| || ||||| | |||||||||||||||| ||||||| |||||||| |||  |||||||||| ||||    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtca 22187279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 35710445 - 35710312
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| ||||  ||  |||||| ||| ||| ||||||| ||||| || ||  |||||||| ||||  |||||    
T  35710445 aagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctatttt--acaca 35710348  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||| ||||||| |||||||||||| |||||||||||    
T  35710347 agaggctgtttccaggacttgaacccgtgacctttc 35710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 37024646 - 37024698
Alignment:
Q  267 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 37024698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 23974834 - 23974771
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||| |||||||||||||| | ||||| |||||||||||| ||||||||| | |||||||    
T  23974834 cttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacat 23974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 41426055 - 41425952
Alignment:
Q  203 cgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcg 302  Q
    ||||| |||| ||||| |||||| ||| ||| | ||||| |||||||  ||  ||||||||||||||||||||| ||| ||||| ||| |||||||| ||    
T  41426055 cgcatccgcagagtctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccg 41425956  T
Q  303 tgac 306  Q
    ||||    
T  41425955 tgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 13801831 - 13801893
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| |||| || ||||||||||||    
T  13801831 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaac 13801893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 1405321 - 1405188
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||| ||| | ||||| | |||||||||| |||  ||  ||||| | ||| ||| ||||||| |||||||| ||| ||||| || ||||||| | |    
T  1405321 aagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatata 1405222  T
Q  276 agaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||| | ||||| |||||||||||| |||||||||    
T  1405221 agaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 22600529 - 22600445
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||||||  |||||||||| |||||||||| |   ||||| |||||||||||| ||| ||||| | |||||||    
T  22600529 atttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacat 22600445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 24323745 - 24323829
Alignment:
Q  215 gtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    |||| |||||| ||| ||||||||||  |||| ||| ||| |||||||||| |||||||||||| | ||||| ||| ||||||||    
T  24323745 gtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 24360369 - 24360453
Alignment:
Q  215 gtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    |||| |||||| ||| ||||||||||  |||| ||| ||| |||||||||| |||||||||||| | ||||| ||| ||||||||    
T  24360369 gtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 28516520 - 28516570
Alignment:
Q  261 cctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||||||||||||| | ||||| || ||||||||| |||||||||||    
T  28516520 cctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttc 28516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 17419945 - 17419904
Alignment:
Q  279 agctgttttcaggacttgaactcgtgacctttcggtcacatt 320  Q
    |||||||| |||||||||||||||| ||||||| ||||||||    
T  17419945 agctgtttccaggacttgaactcgtaacctttcagtcacatt 17419904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 22907925 - 22908008
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||  ||| ||||| ||||||| ||||||||| |||||||   |||||||||| | ||||||||| |||||||    
T  22907925 atttggtgtattgtatgcaaccttactctgtttt-tacacaagaggctgtttcttggacttgaacccttgacctttcagtcacat 22908008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 29355856 - 29356001
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  |||||||||||| |||||    
T  29355856 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 29355955  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  29355956 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat 29356001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 12221915 - 12222061
Alignment:
Q  176 aagggcaacccgatttactaaaa-ctcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttac 272  Q
    |||||||||||| |  ||||||| ||||||||||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  |||||||||||||||||    
T  12221915 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 12222014  T
Q  273 acaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||||| || ||||||||| ||||||||||| |||||||    
T  12222015 acaagaggctgtttccaagacttgaacccgtgacctttcagtcacat 12222061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 18277212 - 18277328
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 293  Q
    |||| |||||||||||| | |||||||||||| ||| ||| ||||||| |  ||||| ||| ||||||||| ||||||||||||| ||||||| || ||     
T  18277212 taaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagat 18277311  T
Q  294 ttgaactcgtgaccttt 310  Q
    |||||| ||||||||||    
T  18277312 ttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 23240841 - 23240964
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||| |||   ||||| ||| ||| | |||||||||||||| ||| |||||||||  |||||||||||| ||||||| ||||    
T  23240841 actaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctg--ttttacacaagaggctgtttccagg 23240938  T
Q  292 acttgaactcgtgacctttcggtcac 317  Q
    ||||| ||  |||||||||| |||||    
T  23240939 acttgcacctgtgacctttcagtcac 23240964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 1347096 - 1346955
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  1347096 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 1346999  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||  ||||||| |||||||||||| ||||||||||| |||||||    
T  1346998 agtggctgtttccaggacttgaacccgtgacctttcagtcacat 1346955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 1354758 - 1354899
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  1354758 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 1354855  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||||||||||||  |||||||||| |||||||    
T  1354856 agaggctgtttccaggacttgaaccagtgacctttcagtcacat 1354899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 32728212 - 32728300
Alignment:
Q  231 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||| ||  |||||||   |||||||||| |||||||    
T  32728212 cactatttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacat 32728300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 13628273 - 13628368
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttt 286  Q
    ||||||||||||||||||||| |||||||||||| ||||  |||||| || |||||||| |||| ||||| || ||||||| |||||| |||||||    
T  13628273 actaaaactcccgcatacgcagagtctaggaaggggtcttgctatttagtgtattgtacgcaattttaccttgtttttttaaacaagaggctgttt 13628368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 2166474 - 2166556
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||| |||| ||||| |||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  2166474 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 2166556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 2178107 - 2178189
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||| |||| ||||| |||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  2178107 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 2178189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 8409310 - 8409233
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 320  Q
    |||||||| ||  ||||||||||||||||||||||| || |||| |||||||||||  ||||||||||| ||||||||    
T  8409310 tattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacatt 8409233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 13905060 - 13905123
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||||||||||| |  ||||||||||||||| | ||||||||||| |||||||    
T  13905060 cttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacat 13905123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 14553585 - 14553511
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 310  Q
    |||||| |||| ||||||  |||||||| |||||||||||||||||| ||| ||||||||||||  |||||||||    
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 17432394 - 17432332
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 318  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||  |||||||||| ||||||    
T  17432394 cttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 9161167 - 9161114
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  9161167 tttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 9161114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 3815137 - 3815221
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| || || |||| | |||||||||||| |  |||||| |||||||||||| |||||| |||| |||||||    
T  3815137 atttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacat 3815221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 6024306 - 6024234
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||||| |||||||| || ||||||| |||||||||||||||| |||||||  |||| |||||  |||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgacctt 6024234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 14975168 - 14975224
Alignment:
Q  263 tgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||||| ||||||| |||||||||||  ||||||||| | |||||||    
T  14975168 tgttttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacat 14975224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 17448378 - 17448323
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||||||||||| | | ||||||||  |||||||| |||||||||||    
T  17448378 cttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttc 17448323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 24097635 - 24097580
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||||||||||| |||||| |||| ||  ||||||| |||||||||||||||    
T  24097635 cttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttc 24097580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 4136598 - 4136648
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgac 306  Q
    |||||||||| |||||||||||| | |||||| ||||||||||| ||||||    
T  4136598 cttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgac 4136648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 20400744 - 20400658
Alignment:
Q  233 ctatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| || || ||||| || ||||||||||||||||||||||||   ||||| ||  ||||||||  |||||||||| |||||||    
T  20400744 ctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacat 20400658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 27855528 - 27855582
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||| |||||||||||| |||||| |||||| ||| |||| |||||||    
T  27855528 ttttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacat 27855582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 22967215 - 22967162
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||| ||||| || |||||||||| |||||||| | |||||||    
T  22967215 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacat 22967162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 23821178 - 23821231
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||| ||||| || |||||||||| |||||||| | |||||||    
T  23821178 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacat 23821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 1941970 - 1941870
Alignment:
Q  195 aaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggact 294  Q
    ||||||||||||||| ||   || |||| || ||| ||| ||| ||| |||||||| ||  ||||||||||||||||||||||| | ||||| || ||||    
T  1941970 aaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgact 1941871  T
Q  295 t 295  Q
    |    
T  1941870 t 1941870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 28007701 - 28007628
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 310  Q
    ||||||| |||||||| ||  || ||||||||||  |||||||| ||| ||| |||||||||||| ||||||||||    
T  28007701 atttggtgtattgtacgcagcctgaccctgtttt--acacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 46965 - 46832
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||| |||||||| |||||||||||    
T  46965 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacaca 46866  T
Q  276 agaagctgttttcaggacttgaactcgtgacctt 309  Q
    ||| | ||||| ||| |||||||| |||||||||    
T  46865 agaggttgtttccagcacttgaacccgtgacctt 46832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 24789 - 24911
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  ||   |||||| ||| ||| ||||||| | |||||| ||  ||||||||||||||||||||||| ||||||     |    
T  24789 actaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----g 24883  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
    |||||||| | ||||||||| |||||||    
T  24884 acttgaacccatgacctttcagtcacat 24911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 19027966 - 19027841
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||| |||||||| ||||| | |||| ||| ||| | ||||| |||||||| ||  ||||||||||||||||||||||| | ||||| ||||    
T  19027966 actaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccagg 19027867  T
Q  292 acttgaactcgtgacctttcggtcac 317  Q
    |||||||| ||||||||||| |||||    
T  19027866 acttgaacccgtgacctttcagtcac 19027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 47444047 - 47443952
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtc 315  Q
    |||||| ||| ||| ||||||| |||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||    
T  47444047 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtc 47443952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 16408665 - 16408747
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| || |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  16408665 ttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 16408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 44363131 - 44363276
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt--ggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| ||||  |||   |||||| ||  | ||||||||||||||||    
T  44363131 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttaca 44363230  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    || || |||||||||||||||||||||||||||||||| |||||||    
T  44363231 cacgaggctgttttcaggacttgaactcgtgacctttcagtcacat 44363276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 39077848 - 39077930
Alignment:
Q  227 gtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||| |||||||||||||||| ||| |||||||||||||  |||||||| ||||||| |||||||||||| |||||||||||    
T  39077848 gtctcaccatttggtatattgtacgcaaccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttc 39077930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 5648369 - 5648250
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||| |||||||| ||||||| |||||||||||    
T  5648369 ctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaa 5648271  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||| | |||||||    
T  5648270 cccgtgaccttacagtcacat 5648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 6430626 - 6430769
Alignment:
Q  175 taagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||| |   ||||| ||||||||||||||  |||  |||||  ||| ||| ||||||| |||||||| ||  ||||||||||||| |||||    
T  6430626 taagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacac 6430724  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| ||||||| || ||||||||| ||||||||||| |||||||    
T  6430725 aagaggctgtttccatgacttgaacccgtgacctttcagtcacat 6430769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 48598826 - 48598967
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||| ||||| |||| |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  48598826 aagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 48598923  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| |||||||||||| ||||||||||| |||||||    
T  48598924 agaggctgtttccaggacttgaacccgtgacctttcagtcacat 48598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 5306709 - 5306807
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| ||||||| |||||||| ||| ||||||||| |||| |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  5306709 ggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgatttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 5306807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 17043413 - 17043536
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 293  Q
    |||| |||| ||||| |||  |||| |||||| ||| ||| ||||||| |||||||| ||  |||||||||| |||||||||||| ||||||| ||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggac 17043512  T
Q  294 ttgaactcgtgacctttcggtcac 317  Q
    ||||||  |||||||||| |||||    
T  17043513 ttgaacctgtgacctttcagtcac 17043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 311
Target Start/End: Complemental strand, 37494969 - 37494850
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| |||| |||||||||  |||  | |||| ||| ||| |||||||||||||||  ||| ||||||||||||||||||||||| | ||||| ||||    
T  37494969 actaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccagg 37494870  T
Q  292 acttgaactcgtgacctttc 311  Q
    ||||||||  ||||||||||    
T  37494869 acttgaacctgtgacctttc 37494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 318
Target Start/End: Complemental strand, 30639513 - 30639372
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||  |  |||||| |||||||||| |||  |||  |||||| ||||||| ||||||| |||||||| ||  ||||||||| ||||||||||    
T  30639513 aagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg-tttttacaca 30639415  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcaca 318  Q
    |||  |||||| ||||||||||||  |||||||||| ||||||    
T  30639414 agagtctgtttccaggacttgaaccagtgacctttcagtcaca 30639372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 9832358 - 9832452
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 316  Q
    |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||    
T  9832358 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgacctttcagtca 9832452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 11054208 - 11054290
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| || ||||||||||||||  ||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  11054208 atttggtgtattgtacgcagtcttaccctgtttt--acacaagagactgttttcaggacttgaacccgtgacctttcagtcacat 11054290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 7385500 - 7385620
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||| ||  |||  |||| | ||| ||| ||||||| ||||| |||||| |||||||| ||||||||||| || ||||||| |||| ||||||    
T  7385500 ctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaa 7385599  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||||| |||||||    
T  7385600 cccgtgacctttcagtcacat 7385620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 21647098 - 21646955
Alignment:
Q  178 gggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||| |  |||||| |||||||||| ||   |||| |||||| ||| ||| |||  ||||||||||||| ||  |||||||| |||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||||||||||||  |||||||| | |||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgaccttccagtcacat 21646955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 25463233 - 25463113
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    |||||||||| |||  |||  |||||| ||| ||| ||||||| | |||||| ||| ||| ||| ||||||||||||||| | ||||| |||||||||||    
T  25463233 ctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaa 25463134  T
Q  299 ctcgtgacctttcggtcacat 319  Q
    | ||||||||||| |||||||    
T  25463133 cccgtgacctttcagtcacat 25463113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 7038126 - 7038044
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||||||||  | ||||||||| ||||||||||||||||||| |||||||||||||||  |||||||||| |||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctg-tttcaggacttgaacctgtgacctttcagtcacat 7038044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 20639659 - 20639777
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactattt-ggtatattgtacacaatcttaccctgttttttacac 274  Q
    |||||||||||| |  |||||| ||||||||||||||  |||  |||||| ||| ||| |||| ||| |||||||| ||  |||||||||||||||||||    
T  20639659 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacac 20639758  T
Q  275 aagaagctgttttcaggac 293  Q
    |||| ||||||| ||||||    
T  20639759 aagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 20225116 - 20224975
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||    
T  20225116 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acaca 20225019  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| | ||||| |||||||||||| | ||||||||| |||||||    
T  20225018 agaggttgtttccaggacttgaacccatgacctttcagtcacat 20224975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 47528575 - 47528672
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  47528575 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 47528672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 23501923 - 23501784
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| |||||||||| |||  |||  |||||| ||| ||| |||  |||| |||||||| ||| ||||||||||||||||||    
T  23501923 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 23501824  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||      ||||||||| ||||||||||| |||||||    
T  23501823 caagaggctgt------gacttgaacccgtgacctttcagtcacat 23501784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 35567260 - 35567169
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||| ||| ||| ||||||| | |||||||||  ||||||||||||||||||||||  ||||||| || ||||||||| | |||||||||    
T  35567260 ggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacctttc 35567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 54967110 - 54967012
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||| |||||||||||||||  ||| ||||||||||||||||||||||| | | ||| ||| ||||||||  |||||||||| |||||||    
T  54967110 ggaaggggtcccaccatttggtatattgtag-caaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacat 54967012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 16911698 - 16911553
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||| |  |||||| ||||||| ||||||  |||  |||||| ||| ||| |||  |||| |||||||| ||  ||||||||| ||| ||||    
T  16911698 aagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtaca 16911599  T
Q  274 caagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||  ||||||||||| ||||||||||  |||||||    
T  16911598 caagaggctgtttctaggacttgaacccgtgacctttaagtcacat 16911553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 29207900 - 29208039
Alignment:
Q  177 agggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaa 276  Q
    ||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||||||  ||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaa 29207997  T
Q  277 gaagctgttttcaggacttgaactcgtgacctttcggtcaca 318  Q
    || ||  ||| |||||||||||| ||||||||||| ||||||    
T  29207998 gaggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 309
Target Start/End: Complemental strand, 40915939 - 40915830
Alignment:
Q  199 ctcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||||||||||  |||  ||||||  || ||| ||||||| |||||||| ||  |||||| ||||||| |||||||| ||||||| |||||||||||    
T  40915939 ctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgttttt-acacaagaggctgtttccaggacttgaa 40915841  T
Q  299 ctcgtgacctt 309  Q
    | |||||||||    
T  40915840 cccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 309
Target Start/End: Complemental strand, 14983952 - 14983835
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||  |||||| ||| ||| |||| || |||||||  ||| |||||||| |||||||||||||| |||||||  | |    
T  14983952 actaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaag 14983853  T
Q  292 acttgaactcgtgacctt 309  Q
    |||||||  |||||||||    
T  14983852 acttgaatccgtgacctt 14983835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 41018824 - 41018935
Alignment:
Q  205 catacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtg 304  Q
    ||||||||  |||| |||||| ||| ||||||||||| ||||||||  |  ||||||||   |||||||||||| | ||||| |||||||||||| ||||    
T  41018824 catacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccct-aattttacacaagaggttgtttccaggacttgaacccgtg 41018922  T
Q  305 acctttcggtcac 317  Q
    ||||||| |||||    
T  41018923 acctttcagtcac 41018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 7909280 - 7909397
Alignment:
Q  175 taagggcaacccgatttactaaaactccc-gcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttaca 273  Q
    |||||||||||||||  |||||| ||||| |||||||||  ||   |||||| ||| ||| ||||||| |||||||| ||| ||||||||| ||||||||    
T  7909280 taagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-tttttaca 7909378  T
Q  274 caagaagctgttttcagga 292  Q
    |||||  |||||| |||||    
T  7909379 caagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 278
Target Start/End: Complemental strand, 25629183 - 25629081
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| |||||||||| | |  |||  |||||| ||| ||| ||||||| |||||||||||  |||||||| |||||||||||    
T  25629183 aagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacaca 25629084  T
Q  276 aga 278  Q
    |||    
T  25629083 aga 25629081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 54730294 - 54730240
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||||| |||||||  ||||||||||| |||||||||| ||||||||    
T  54730294 ttttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacat 54730240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 9987853 - 9987957
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 293  Q
    |||| |||||||||| |||  ||| ||||||| ||| ||| ||||||| |||||||  ||  |||||||| || ||||||||||| | ||||| ||||||    
T  9987853 taaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggac 9987952  T
Q  294 ttgaa 298  Q
    |||||    
T  9987953 ttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 10379999 - 10380086
Alignment:
Q  231 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||| |||||||| |||| ||| ||| |||| ||||||||| | |||||  |||||||||||  |||||||||| |||||||    
T  10379999 cactatttggtgtattgtacgcaattttatcctatttt-tacacaagaggttgtttgtaggacttgaacaagtgacctttcagtcacat 10380086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 30352681 - 30352733
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||||||||||| ||||||| |||||||  ||| |||||||||||||||||    
T  30352681 ttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcac 30352733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 30690273 - 30690325
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||||||| |||||    
T  30690273 ttttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcac 30690325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 39029129 - 39029185
Alignment:
Q  243 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    |||||||||||  ||||||||||||||||||||||| ||||||| || | |||||||    
T  39029129 tattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaac 39029185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 51865057 - 51865149
Alignment:
Q  194 taaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttt 286  Q
    |||| ||||||||||||||  |||  |||||| | | ||| ||||||| |||||||| ||  |||||| |||||||||||||||| |||||||    
T  51865057 taaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 54175137 - 54175054
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgtttt-caggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| |||||||| ||  |||||||||||||| |||||||| |||||||| |||||||||||  |||||| |||| |||||||    
T  54175137 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgttttccaggacttgaatccgtgacatttcagtcacat 54175054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 30581527 - 30581602
Alignment:
Q  236 tttggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 310  Q
    |||||| |||||||||||  ||||||||| |||||||||||||| | ||||| || ||||||||| | ||||||||    
T  30581527 tttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgaccttt 30581602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 42164230 - 42164292
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||| ||||||||| | ||||| || ||||||||| ||||||||||| |||||||    
T  42164230 cttaccctgtttt-tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacat 42164292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 49938681 - 49938732
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||| |||||    
T  49938681 tttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcac 49938732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 487217 - 487279
Alignment:
Q  257 ttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||| ||||||||| | ||||| || ||||||||| ||||||||||| |||||||    
T  487217 ttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacat 487279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 21489153 - 21489099
Alignment:
Q  244 attgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 298  Q
    ||||||| || |||||| ||||||||||| ||||| ||||||| |||||||||||    
T  21489153 attgtacgcagtcttactctgttttttacgcaagaggctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 23580288 - 23580350
Alignment:
Q  255 tcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||| ||||||||||||||||||| ||| |||  || |||||||| ||||||||||| |||||    
T  23580288 tcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcac 23580350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 36589796 - 36589754
Alignment:
Q  257 ttaccctgttttttacacaagaagctgttttcaggacttgaac 299  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||    
T  36589796 ttaccatgttttttacacaagaggctgtttccaggacttgaac 36589754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 47441590 - 47441672
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||||| |||||||||||  ||||||||| |||||||| ||||  ||||||   ||||||||||  |||||||||| |||||    
T  47441590 atttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcac 47441672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 54640429 - 54640475
Alignment:
Q  265 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    |||||||||||||| ||||||| || ||||||||| |||||||||||    
T  54640429 ttttttacacaagaggctgtttccaagacttgaacccgtgacctttc 54640475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 10660538 - 10660395
Alignment:
Q  178 gggcaacccgatttactaaaa-ctcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||  ||| ||| ||||||||||||||  |||| |||||| ||||||| |||  |||| |||||||  ||  | |||||| |||||||||     
T  10660538 gggcaacccgatgcacttaaagctcccgcatacgcag-gtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacat 10660440  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | ||||| ||||||||||||  || ||||||| |||||||    
T  10660439 aagaggttgtttccaggacttgaacatgtaacctttcagtcacat 10660395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 10874683 - 10874540
Alignment:
Q  178 gggcaacccgatttactaaaa-ctcccgcatacgcatagtctaggaaggagtctcactatt--tggtatattgtacacaatcttaccctgttttttacac 274  Q
    ||||||||||||  ||| ||| ||||||||||||||  |||| |||||| ||||||| |||  |||| |||||||  ||  | |||||| |||||||||     
T  10874683 gggcaacccgatgcacttaaagctcccgcatacgcag-gtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacat 10874585  T
Q  275 aagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||| | ||||| ||||||||||||  || ||||||| |||||||    
T  10874584 aagaggttgtttccaggacttgaacatgtaacctttcagtcacat 10874540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 25343261 - 25343180
Alignment:
Q  236 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| |||||||| ||  |||||||||||||||||||||||  || ||| ||| ||||||||  ||||||| || |||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcac 25343180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 30496413 - 30496462
Alignment:
Q  268 tttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||| |||||    
T  30496413 tttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcac 30496462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 43035302 - 43035241
Alignment:
Q  256 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 317  Q
    |||||| ||||| |||||||||| | ||||| | |||||||||| ||||||||||| |||||    
T  43035302 cttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcac 43035241  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 14590892 - 14590828
Alignment:
Q  256 cttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||| | |||||| |||||||  ||||||||||  ||||||||||| |||||||    
T  14590892 cttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacat 14590828  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 20405154 - 20405110
Alignment:
Q  243 tattgtacacaatcttaccctgtt-ttttacacaagaagctgttt 286  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||    
T  20405154 tattgtacgcaatcttaccctgtttttttacacaagaggctgttt 20405110  T

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Target: scaffold0187 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 10095 - 10192
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||||||||||| |||||||| || |||||| |||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10095 ggaaggggtcccactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10192  T

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Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 20423 - 20520
Alignment:
Q  220 ggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||| ||| ||||||||||| |||||||| || |||||| |||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  20423 ggaaggggtcccactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 20520  T

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Target: scaffold0311 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 10928 - 10801
Alignment:
Q  192 actaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcagg 291  Q
    |||||| ||||||||||||||  |||  |||||| ||| ||| ||||||| ||||| || ||  | ||||||||||||||||||||| | |||||||||     
T  10928 actaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcaga 10829  T
Q  292 acttgaactcgtgacctttcggtcacat 319  Q
     ||||||| ||||||||| | |||||||    
T  10828 ccttgaacccgtgaccttccagtcacat 10801  T

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Target: scaffold0258 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 13025 - 13167
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||||| | ||||||||||||  |||| |||||| ||| ||| ||| ||| |||||||| ||  |||||| ||||||| || ||    
T  13025 aagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgttttt-acgca 13123  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||||||||||||  |||||||||| |||||||    
T  13124 agaggctgtttccaggacttgaaccggtgacctttcagtcacat 13167  T

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Target: scaffold0254 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 4230 - 4148
Alignment:
Q  237 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||| |||||||| ||| |||| ||||| |||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 4148  T

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Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 30711 - 30570
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  | |||||||||||  |||||    
T  30711 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgtttt--acaca 30614  T
Q  276 agaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||| ||||||| ||||||||||||  |||||||||| |||||||    
T  30613 agaggctgtttccaggacttgaaccggtgacctttcagtcacat 30570  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 11174 - 11122
Alignment:
Q  267 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  11174 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 11122  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 35077 - 35162
Alignment:
Q  235 atttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||| |||||||| ||  |||||||||||||   ||||||||  ||||||||||||||||||| ||||||||| | |||||||    
T  35077 atttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacat 35162  T

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Target: scaffold1176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 1677 - 1729
Alignment:
Q  267 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    |||||||||||| | |||||||||||||||||| | ||||||||| |||||||    
T  1677 ttttacacaagaggttgttttcaggacttgaacccatgacctttcagtcacat 1729  T

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Target: scaffold0167 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 23694 - 23590
Alignment:
Q  215 gtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggt 314  Q
    |||| |||||| ||| ||| ||||| || ||||||| ||  || |||||||||||||||||||| | ||||| || ||||||||| |||  |||||| ||    
T  23694 gtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttcagt 23595  T
Q  315 cacat 319  Q
    |||||    
T  23594 cacat 23590  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 43173 - 43128
Alignment:
Q  266 tttttacacaagaagctgttttcaggacttgaactcgtgacctttc 311  Q
    ||||||||||||| |||||||  ||||| |||||||||||||||||    
T  43173 tttttacacaagaggctgtttctaggacctgaactcgtgacctttc 43128  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 299
Target Start/End: Original strand, 48635 - 48756
Alignment:
Q  176 aagggcaacccgatttactaaaactcccgcatacgcatagtctaggaaggagtctcactatttggtatattgtacacaatcttaccctgttttttacaca 275  Q
    |||||||||||| |  |||| | |||||||||| |||  |||  |||||| ||| ||| ||||||| |||||||| ||  |||||||||  |||||||||    
T  48635 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48732  T
Q  276 agaagctgttttcaggacttgaac 299  Q
    ||| ||||||| ||  ||||||||    
T  48733 agaggctgtttccaccacttgaac 48756  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 226486 - 226550
Alignment:
Q  256 cttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 319  Q
    ||||||||||||||| | |||||| |||||||  ||||||||||  ||||||||||| |||||||    
T  226486 cttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacat 226550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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