View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3494_high_11 (Length: 245)
Name: NF3494_high_11
Description: NF3494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3494_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9063769 - 9063988
Alignment:
| Q |
1 |
ttgtgtggagaagccctctatctcaaaaagatcagaacttgaatcgctagctacatcttcatcatttacatttgactttggtaaacttgttggttgaata |
100 |
Q |
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| T |
9063769 |
ttgtgtggagaagccctctatctcaaaaagatcagaacttgaatcactagctacatcttcatcatttacatttgactttggtaaacttgttggttgaaaa |
9063868 |
T |
|
| Q |
101 |
acatgcaaggaatcacgtacctcctcttccttttcttcttcatgatcatgatcatcatcttcatcatttgttgtcaacttgtcttttggtgttttttctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9063869 |
acatgcaaggaatcacgtacctcctcttccttttcttcttcatgatcatgatcatcatcttcatcatttgttgtcaacttgtcttttggtgttttttctt |
9063968 |
T |
|
| Q |
201 |
gaatcacatcatttatagta |
220 |
Q |
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|| ||||||||||||||||| |
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| T |
9063969 |
gattcacatcatttatagta |
9063988 |
T |
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