View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3495_low_39 (Length: 201)
Name: NF3495_low_39
Description: NF3495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3495_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 2671428 - 2671606
Alignment:
| Q |
1 |
tggtggctccaaaaagaatgcaggaatgattgctggaattacaattactatagttatcctgattttgggagtgatcttattcattttgaggaataaaagg |
100 |
Q |
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| T |
2671428 |
tggtggctccaaaaagaatgcaggaatgattgctggaattacaattactatagttatcctgattttgggagtgatcttattcattttgaggaagaaaagg |
2671527 |
T |
|
| Q |
101 |
agatggcagagaatacagaaagtgaataatagtcagagaggtacttgcacctaatgttctcttaaccatgctacctatg |
179 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2671528 |
agatggcagagaatacagaaagtgaataatagtcagagaggtacttgcacctaatgttctcttaaccatgctacctatg |
2671606 |
T |
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