View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3497_low_3 (Length: 444)

Name: NF3497_low_3
Description: NF3497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3497_low_3
NF3497_low_3
[»] scaffold0234 (4 HSPs)
scaffold0234 (206-430)||(2041-2265)
scaffold0234 (206-430)||(10932-11156)
scaffold0234 (159-197)||(2490-2528)
scaffold0234 (159-197)||(11381-11419)
[»] scaffold0186 (2 HSPs)
scaffold0186 (206-434)||(25706-25934)
scaffold0186 (159-197)||(26159-26197)
[»] chr6 (57 HSPs)
chr6 (206-430)||(17684189-17684413)
chr6 (206-430)||(17691160-17691384)
chr6 (206-430)||(27296892-27297116)
chr6 (206-430)||(27380972-27381196)
chr6 (206-430)||(27471355-27471579)
chr6 (206-430)||(11651986-11652210)
chr6 (206-430)||(29309153-29309377)
chr6 (206-430)||(29316113-29316336)
chr6 (208-429)||(16559193-16559414)
chr6 (206-426)||(25536915-25537135)
chr6 (206-430)||(188697-188921)
chr6 (206-430)||(16394165-16394389)
chr6 (272-413)||(13359010-13359152)
chr6 (206-430)||(27508347-27508567)
chr6 (206-430)||(1586108-1586328)
chr6 (206-430)||(16789153-16789373)
chr6 (206-430)||(22859888-22860108)
chr6 (12-110)||(11190394-11190488)
chr6 (206-416)||(27527947-27528153)
chr6 (212-408)||(10359073-10359264)
chr6 (209-430)||(14074565-14074782)
chr6 (10-110)||(3535927-3536025)
chr6 (10-110)||(3542138-3542236)
chr6 (206-430)||(8612997-8613221)
chr6 (10-110)||(30052094-30052194)
chr6 (206-386)||(18019885-18020061)
chr6 (18-110)||(30049815-30049907)
chr6 (206-420)||(2669556-2669768)
chr6 (206-361)||(8510186-8510338)
chr6 (206-345)||(20736413-20736549)
chr6 (10-99)||(2339157-2339245)
chr6 (30-110)||(29340904-29340984)
chr6 (317-430)||(33317055-33317167)
chr6 (207-430)||(17120505-17120724)
chr6 (210-333)||(21994674-21994794)
chr6 (31-99)||(26571062-26571130)
chr6 (10-109)||(3565630-3565726)
chr6 (289-352)||(28172899-28172963)
chr6 (274-413)||(28756145-28756283)
chr6 (159-197)||(27381421-27381459)
chr6 (159-197)||(27471804-27471842)
chr6 (159-197)||(29308890-29308928)
chr6 (159-197)||(29315850-29315888)
chr6 (161-197)||(189146-189182)
chr6 (206-345)||(5758565-5758701)
chr6 (161-197)||(16566489-16566525)
chr6 (161-197)||(17684638-17684674)
chr6 (161-197)||(25537328-25537364)
chr6 (159-197)||(17691609-17691647)
chr6 (269-327)||(17850321-17850379)
chr6 (206-302)||(22560311-22560404)
chr6 (161-197)||(11651725-11651761)
chr6 (212-333)||(4073664-4073781)
chr6 (240-333)||(19218540-19218630)
chr6 (66-100)||(19232329-19232363)
chr6 (62-99)||(13645918-13645955)
chr6 (161-197)||(13359438-13359474)
[»] chr5 (41 HSPs)
chr5 (206-430)||(24695186-24695410)
chr5 (206-430)||(19714218-19714442)
chr5 (206-430)||(18569581-18569805)
chr5 (207-430)||(19706939-19707161)
chr5 (256-434)||(27347252-27347428)
chr5 (210-430)||(17298621-17298839)
chr5 (323-430)||(24701950-24702057)
chr5 (10-110)||(40778884-40778984)
chr5 (210-430)||(17285470-17285688)
chr5 (206-308)||(39538851-39538953)
chr5 (206-430)||(22941332-22941552)
chr5 (206-430)||(20941109-20941329)
chr5 (206-430)||(25805385-25805605)
chr5 (207-430)||(31096899-31097118)
chr5 (206-430)||(31981-32201)
chr5 (206-430)||(12789663-12789883)
chr5 (206-430)||(23546004-23546224)
chr5 (206-418)||(20100255-20100463)
chr5 (206-430)||(24933306-24933526)
chr5 (206-343)||(18806483-18806618)
chr5 (206-343)||(18806663-18806798)
chr5 (206-343)||(18806843-18806978)
chr5 (10-100)||(21849079-21849168)
chr5 (206-430)||(12764990-12765214)
chr5 (210-430)||(5097737-5097953)
chr5 (206-430)||(7865430-7865654)
chr5 (206-430)||(9811733-9811957)
chr5 (206-430)||(12703874-12704098)
chr5 (345-434)||(28719471-28719558)
chr5 (210-434)||(26129689-26129909)
chr5 (214-430)||(18829281-18829497)
chr5 (22-99)||(19677239-19677315)
chr5 (206-430)||(26245184-26245404)
chr5 (349-430)||(39538954-39539035)
chr5 (210-297)||(22546872-22546956)
chr5 (159-197)||(24695635-24695673)
chr5 (159-197)||(18570032-18570070)
chr5 (161-195)||(19714669-19714703)
chr5 (159-197)||(39537962-39538000)
chr5 (206-297)||(31651917-31652004)
chr5 (35-99)||(35160836-35160899)
[»] chr4 (77 HSPs)
chr4 (206-430)||(8858430-8858654)
chr4 (206-430)||(18262475-18262699)
chr4 (206-430)||(18269336-18269560)
chr4 (206-430)||(55612946-55613170)
chr4 (206-430)||(868860-869084)
chr4 (206-430)||(19926480-19926704)
chr4 (206-430)||(26963903-26964127)
chr4 (206-430)||(26970726-26970950)
chr4 (206-430)||(10621053-10621277)
chr4 (210-430)||(5707587-5707807)
chr4 (210-430)||(5714215-5714435)
chr4 (206-430)||(8845466-8845690)
chr4 (206-430)||(10628132-10628356)
chr4 (206-430)||(28392854-28393078)
chr4 (206-430)||(5667849-5668071)
chr4 (206-430)||(35223823-35224047)
chr4 (206-430)||(4426336-4426548)
chr4 (206-430)||(10677303-10677526)
chr4 (206-430)||(10890943-10891166)
chr4 (206-434)||(20311555-20311781)
chr4 (206-430)||(15461579-15461799)
chr4 (206-430)||(34975633-34975853)
chr4 (10-110)||(6659428-6659527)
chr4 (206-430)||(2677095-2677315)
chr4 (206-430)||(15815103-15815323)
chr4 (206-430)||(18111043-18111263)
chr4 (206-430)||(26531695-26531915)
chr4 (206-414)||(19365601-19365806)
chr4 (206-430)||(1941806-1942026)
chr4 (206-430)||(3369023-3369243)
chr4 (206-430)||(17299959-17300179)
chr4 (206-430)||(20244019-20244239)
chr4 (30-110)||(13085190-13085270)
chr4 (206-329)||(21453961-21454083)
chr4 (206-430)||(4675983-4676203)
chr4 (206-430)||(18163244-18163464)
chr4 (210-430)||(30040489-30040705)
chr4 (10-110)||(22691203-22691302)
chr4 (10-110)||(22716551-22716649)
chr4 (206-430)||(5870500-5870720)
chr4 (206-413)||(19362492-19362695)
chr4 (31-110)||(13086233-13086312)
chr4 (10-110)||(22988568-22988666)
chr4 (206-414)||(5616477-5616681)
chr4 (206-430)||(9487633-9487853)
chr4 (213-430)||(11421096-11421309)
chr4 (206-414)||(5528495-5528699)
chr4 (206-414)||(9538041-9538244)
chr4 (210-328)||(32636570-32636685)
chr4 (206-345)||(4546162-4546298)
chr4 (2-99)||(2053116-2053212)
chr4 (159-197)||(5707320-5707358)
chr4 (159-197)||(5713948-5713986)
chr4 (32-109)||(9596854-9596931)
chr4 (159-197)||(10621502-10621540)
chr4 (159-197)||(10628581-10628619)
chr4 (159-197)||(12357136-12357174)
chr4 (159-197)||(19926929-19926967)
chr4 (302-352)||(24701361-24701411)
chr4 (159-197)||(26963640-26963678)
chr4 (159-197)||(26970463-26970501)
chr4 (206-430)||(32646523-32646745)
chr4 (159-197)||(55612683-55612721)
chr4 (161-197)||(4426772-4426808)
chr4 (159-197)||(868597-868635)
chr4 (321-402)||(9937745-9937826)
chr4 (35-110)||(4053062-4053137)
chr4 (161-197)||(5616215-5616251)
chr4 (161-197)||(18262214-18262250)
chr4 (161-197)||(28393303-28393339)
chr4 (42-110)||(54239531-54239597)
chr4 (262-333)||(33888672-33888743)
chr4 (161-191)||(18269070-18269100)
chr4 (15-99)||(34949098-34949182)
chr4 (210-255)||(56516323-56516368)
chr4 (165-197)||(5668295-5668327)
chr4 (34-110)||(38223126-38223200)
[»] chr3 (80 HSPs)
chr3 (206-430)||(6110327-6110551)
chr3 (206-430)||(8490758-8490982)
chr3 (206-430)||(16482203-16482427)
chr3 (206-430)||(10579075-10579299)
chr3 (206-430)||(15357306-15357530)
chr3 (206-430)||(15600604-15600828)
chr3 (206-430)||(15607149-15607373)
chr3 (206-430)||(10572312-10572536)
chr3 (206-430)||(15341939-15342163)
chr3 (206-430)||(17780838-17781062)
chr3 (206-430)||(18520238-18520462)
chr3 (206-426)||(18522926-18523146)
chr3 (210-430)||(32056619-32056839)
chr3 (206-430)||(13211565-13211789)
chr3 (206-430)||(13248870-13249094)
chr3 (206-434)||(17199900-17200128)
chr3 (206-430)||(17136616-17136840)
chr3 (206-430)||(13517074-13517294)
chr3 (206-430)||(1647241-1647465)
chr3 (206-430)||(16200693-16200917)
chr3 (206-430)||(29925234-29925458)
chr3 (206-430)||(29974387-29974611)
chr3 (24-110)||(5128814-5128900)
chr3 (206-430)||(21034320-21034540)
chr3 (206-430)||(15846536-15846756)
chr3 (206-430)||(21398874-21399094)
chr3 (206-430)||(12299992-12300212)
chr3 (206-430)||(20147554-20147774)
chr3 (206-430)||(25978728-25978948)
chr3 (206-430)||(55427103-55427323)
chr3 (206-430)||(14890473-14890693)
chr3 (1-110)||(53012909-53013017)
chr3 (10-110)||(43306770-43306869)
chr3 (1-110)||(3063835-3063943)
chr3 (1-110)||(3068973-3069081)
chr3 (206-396)||(15526835-15527021)
chr3 (245-430)||(28088227-28088408)
chr3 (10-110)||(41218696-41218794)
chr3 (45-110)||(40593541-40593605)
chr3 (10-100)||(25857683-25857773)
chr3 (10-88)||(39913348-39913426)
chr3 (10-110)||(43304058-43304155)
chr3 (206-430)||(11787669-11787889)
chr3 (206-332)||(14147103-14147226)
chr3 (206-430)||(15317176-15317393)
chr3 (210-412)||(24253130-24253328)
chr3 (22-89)||(45168410-45168478)
chr3 (277-392)||(30464147-30464261)
chr3 (159-197)||(6110064-6110102)
chr3 (159-197)||(8490488-8490526)
chr3 (159-197)||(10572761-10572799)
chr3 (159-197)||(13248607-13248645)
chr3 (159-197)||(18640915-18640953)
chr3 (239-356)||(32280388-32280507)
chr3 (33-109)||(33620106-33620181)
chr3 (35-110)||(4580479-4580553)
chr3 (161-197)||(13516813-13516849)
chr3 (161-197)||(16482652-16482688)
chr3 (161-197)||(17200353-17200389)
chr3 (161-197)||(18510924-18510960)
chr3 (161-197)||(18519980-18520016)
chr3 (161-197)||(18522665-18522701)
chr3 (161-197)||(18534758-18534794)
chr3 (162-197)||(13211305-13211340)
chr3 (159-197)||(15357755-15357793)
chr3 (159-197)||(15601053-15601091)
chr3 (159-197)||(15607598-15607636)
chr3 (34-99)||(20398508-20398574)
chr3 (159-197)||(29924971-29925009)
chr3 (159-197)||(29974124-29974162)
chr3 (34-83)||(19795168-19795217)
chr3 (165-197)||(1647694-1647726)
chr3 (165-197)||(10579524-10579556)
chr3 (165-197)||(17781287-17781319)
chr3 (165-197)||(19089914-19089946)
chr3 (165-197)||(32057069-32057101)
chr3 (269-333)||(36138033-36138097)
chr3 (31-99)||(19949914-19949983)
chr3 (34-110)||(25340181-25340256)
chr3 (269-333)||(36142816-36142880)
[»] chr1 (51 HSPs)
chr1 (206-430)||(18252293-18252517)
chr1 (206-430)||(18532234-18532458)
chr1 (206-430)||(27131130-27131353)
chr1 (206-430)||(27310297-27310521)
chr1 (210-430)||(16358755-16358975)
chr1 (206-430)||(3855639-3855863)
chr1 (206-430)||(22641594-22641817)
chr1 (206-430)||(36816354-36816577)
chr1 (206-430)||(27277278-27277501)
chr1 (238-430)||(9916497-9916688)
chr1 (206-302)||(21171081-21171177)
chr1 (10-110)||(50857542-50857642)
chr1 (206-430)||(19706439-19706659)
chr1 (206-430)||(28134723-28134943)
chr1 (206-430)||(43802365-43802585)
chr1 (206-430)||(20391239-20391459)
chr1 (206-430)||(9456198-9456418)
chr1 (206-430)||(20779645-20779865)
chr1 (206-430)||(22670257-22670477)
chr1 (206-430)||(42816989-42817209)
chr1 (206-410)||(634016-634216)
chr1 (209-430)||(22612577-22612794)
chr1 (206-430)||(8727749-8727969)
chr1 (207-430)||(23507164-23507385)
chr1 (41-99)||(12486334-12486392)
chr1 (10-110)||(13444086-13444185)
chr1 (206-414)||(29096804-29097008)
chr1 (259-430)||(47667485-47667654)
chr1 (10-109)||(13441698-13441796)
chr1 (317-430)||(28145723-28145835)
chr1 (40-110)||(42071420-42071489)
chr1 (206-330)||(21881475-21881596)
chr1 (15-110)||(40804557-40804650)
chr1 (52-110)||(8931153-8931211)
chr1 (159-197)||(18252030-18252068)
chr1 (159-197)||(18532683-18532721)
chr1 (159-197)||(27131578-27131616)
chr1 (210-352)||(12014084-12014224)
chr1 (210-263)||(22657108-22657161)
chr1 (161-197)||(16359204-16359240)
chr1 (161-197)||(21171402-21171438)
chr1 (161-197)||(27310746-27310782)
chr1 (206-333)||(51997361-51997485)
chr1 (260-343)||(24301691-24301774)
chr1 (283-363)||(12006332-12006413)
chr1 (206-255)||(35930664-35930713)
chr1 (165-197)||(36816802-36816834)
chr1 (269-328)||(10852402-10852461)
chr1 (206-257)||(26923553-26923604)
chr1 (159-197)||(3856088-3856126)
chr1 (212-291)||(31236402-31236478)
[»] chr8 (55 HSPs)
chr8 (206-429)||(21940928-21941151)
chr8 (206-430)||(15326461-15326685)
chr8 (206-430)||(15506830-15507054)
chr8 (210-430)||(22171754-22171974)
chr8 (206-430)||(6094386-6094610)
chr8 (206-430)||(24642912-24643135)
chr8 (289-430)||(28548393-28548534)
chr8 (10-110)||(42891762-42891862)
chr8 (210-315)||(24797224-24797328)
chr8 (10-110)||(22921948-22922048)
chr8 (210-430)||(8371253-8371469)
chr8 (206-363)||(14983710-14983864)
chr8 (12-110)||(18180781-18180877)
chr8 (206-430)||(12562205-12562425)
chr8 (206-430)||(21969415-21969635)
chr8 (206-430)||(22659494-22659714)
chr8 (10-110)||(22512144-22512245)
chr8 (206-430)||(25611277-25611497)
chr8 (206-430)||(27007517-27007737)
chr8 (206-430)||(27014660-27014880)
chr8 (206-430)||(27880487-27880707)
chr8 (206-430)||(28020668-28020888)
chr8 (10-110)||(42890289-42890383)
chr8 (40-110)||(22520897-22520967)
chr8 (206-430)||(22130609-22130829)
chr8 (206-430)||(21916758-21916978)
chr8 (206-430)||(26240566-26240786)
chr8 (206-430)||(45534273-45534493)
chr8 (40-110)||(22926746-22926816)
chr8 (206-430)||(6430968-6431188)
chr8 (206-345)||(8781959-8782095)
chr8 (212-414)||(38232115-38232315)
chr8 (10-110)||(23573475-23573574)
chr8 (10-110)||(6845229-6845327)
chr8 (323-420)||(24796731-24796826)
chr8 (10-98)||(26150582-26150669)
chr8 (206-333)||(18835432-18835556)
chr8 (227-414)||(20535226-20535409)
chr8 (22-110)||(23570488-23570575)
chr8 (206-430)||(2962932-2963156)
chr8 (13-110)||(37189761-37189857)
chr8 (317-435)||(36970439-36970556)
chr8 (317-434)||(2375411-2375528)
chr8 (159-197)||(21940665-21940703)
chr8 (281-403)||(29645675-29645797)
chr8 (165-197)||(6094129-6094161)
chr8 (165-197)||(24642655-24642687)
chr8 (161-197)||(28554885-28554921)
chr8 (369-430)||(8968015-8968076)
chr8 (2-99)||(38082195-38082291)
chr8 (161-197)||(22171491-22171527)
chr8 (165-197)||(24636860-24636892)
chr8 (269-389)||(32872609-32872729)
chr8 (370-418)||(41368106-41368154)
chr8 (370-418)||(41375077-41375125)
[»] scaffold0433 (2 HSPs)
scaffold0433 (206-430)||(7370-7594)
scaffold0433 (159-197)||(7107-7145)
[»] scaffold0390 (4 HSPs)
scaffold0390 (206-430)||(6654-6878)
scaffold0390 (206-430)||(13670-13894)
scaffold0390 (159-197)||(7103-7141)
scaffold0390 (159-197)||(14119-14157)
[»] chr7 (60 HSPs)
chr7 (206-426)||(15152706-15152926)
chr7 (206-430)||(29328047-29328271)
chr7 (206-430)||(11535782-11536006)
chr7 (210-430)||(12751093-12751313)
chr7 (206-430)||(11542700-11542924)
chr7 (213-430)||(12738806-12739023)
chr7 (206-430)||(13392413-13392637)
chr7 (206-430)||(18561270-18561485)
chr7 (206-436)||(18257559-18257786)
chr7 (1-99)||(4303332-4303430)
chr7 (206-430)||(2365185-2365407)
chr7 (10-110)||(13882784-13882882)
chr7 (206-430)||(2204634-2204854)
chr7 (206-430)||(8465081-8465301)
chr7 (206-430)||(18400186-18400406)
chr7 (206-430)||(18407170-18407390)
chr7 (210-430)||(41680968-41681184)
chr7 (206-430)||(48808496-48808716)
chr7 (10-110)||(13886286-13886384)
chr7 (206-430)||(15729833-15730053)
chr7 (206-430)||(18139338-18139558)
chr7 (206-430)||(19230970-19231190)
chr7 (206-418)||(30254220-30254428)
chr7 (206-430)||(34128655-34128875)
chr7 (210-418)||(47166871-47167075)
chr7 (211-430)||(18259124-18259339)
chr7 (1-110)||(859254-859362)
chr7 (1-110)||(1217258-1217366)
chr7 (206-408)||(24443349-24443547)
chr7 (206-408)||(25845498-25845696)
chr7 (206-408)||(25845917-25846115)
chr7 (208-430)||(28130645-28130863)
chr7 (206-430)||(10668901-10669122)
chr7 (206-344)||(31190524-31190659)
chr7 (282-419)||(39112138-39112275)
chr7 (10-73)||(4300448-4300511)
chr7 (206-392)||(19393462-19393644)
chr7 (32-110)||(31577281-31577359)
chr7 (206-345)||(19388634-19388774)
chr7 (206-430)||(14591932-14592153)
chr7 (206-430)||(16011523-16011744)
chr7 (10-79)||(5678340-5678408)
chr7 (10-79)||(5703392-5703460)
chr7 (242-430)||(15169290-15169474)
chr7 (206-330)||(22969032-22969153)
chr7 (281-356)||(22948499-22948574)
chr7 (159-197)||(11536231-11536269)
chr7 (159-197)||(29327784-29327822)
chr7 (161-197)||(18258011-18258047)
chr7 (161-197)||(18561009-18561045)
chr7 (2-99)||(4668274-4668370)
chr7 (159-197)||(11543149-11543187)
chr7 (161-195)||(12750828-12750862)
chr7 (159-191)||(2653207-2653239)
chr7 (161-197)||(15148144-15148180)
chr7 (161-197)||(15152445-15152481)
chr7 (40-99)||(32936869-32936926)
chr7 (66-99)||(22572497-22572530)
chr7 (165-197)||(12738542-12738574)
chr7 (276-340)||(29984308-29984372)
[»] scaffold0220 (2 HSPs)
scaffold0220 (206-430)||(18551-18774)
scaffold0220 (159-197)||(18288-18326)
[»] chr2 (37 HSPs)
chr2 (210-430)||(21329968-21330188)
chr2 (206-430)||(18796769-18796993)
chr2 (206-436)||(18620067-18620296)
chr2 (10-110)||(27956252-27956352)
chr2 (10-110)||(27952416-27952516)
chr2 (206-430)||(36270429-36270650)
chr2 (208-416)||(6991847-6992054)
chr2 (17-110)||(33655525-33655619)
chr2 (210-430)||(20978142-20978360)
chr2 (206-430)||(30174459-30174679)
chr2 (206-430)||(24250032-24250252)
chr2 (212-418)||(18822352-18822556)
chr2 (206-418)||(15342014-15342222)
chr2 (206-430)||(24229215-24229435)
chr2 (267-430)||(17241034-17241196)
chr2 (206-432)||(29800553-29800775)
chr2 (283-430)||(22183206-22183354)
chr2 (10-110)||(22011324-22011427)
chr2 (10-110)||(2155859-2155958)
chr2 (12-110)||(8781408-8781503)
chr2 (31-98)||(22264347-22264414)
chr2 (10-110)||(31633996-31634095)
chr2 (10-110)||(31636229-31636328)
chr2 (206-345)||(19616517-19616653)
chr2 (206-332)||(40301034-40301156)
chr2 (283-363)||(36799745-36799826)
chr2 (210-333)||(21626836-21626955)
chr2 (210-405)||(41316305-41316496)
chr2 (363-430)||(41661694-41661761)
chr2 (269-345)||(28740910-28740986)
chr2 (159-197)||(21330417-21330455)
chr2 (61-99)||(44675330-44675368)
chr2 (165-197)||(19692705-19692737)
chr2 (10-110)||(2165815-2165914)
chr2 (209-255)||(19279554-19279600)
chr2 (30-110)||(18725692-18725772)
chr2 (161-197)||(18619807-18619843)
[»] scaffold0657 (2 HSPs)
scaffold0657 (210-411)||(1260-1461)
scaffold0657 (159-197)||(993-1031)
[»] scaffold0008 (2 HSPs)
scaffold0008 (206-430)||(230111-230335)
scaffold0008 (161-197)||(230509-230545)
[»] scaffold0063 (2 HSPs)
scaffold0063 (206-434)||(5792-6013)
scaffold0063 (161-197)||(5531-5567)
[»] scaffold0466 (1 HSPs)
scaffold0466 (206-418)||(12961-13169)
[»] scaffold0112 (1 HSPs)
scaffold0112 (206-430)||(265-485)
[»] scaffold0006 (1 HSPs)
scaffold0006 (206-430)||(67374-67594)
[»] scaffold0264 (1 HSPs)
scaffold0264 (206-430)||(3675-3895)
[»] scaffold0028 (1 HSPs)
scaffold0028 (206-430)||(119812-120032)
[»] scaffold0111 (1 HSPs)
scaffold0111 (206-430)||(26624-26844)
[»] scaffold0001 (1 HSPs)
scaffold0001 (206-392)||(130262-130444)
[»] scaffold0297 (1 HSPs)
scaffold0297 (240-430)||(102-288)
[»] scaffold0136 (1 HSPs)
scaffold0136 (206-402)||(8813-9005)
[»] scaffold0031 (1 HSPs)
scaffold0031 (206-430)||(39988-40208)
[»] scaffold0378 (1 HSPs)
scaffold0378 (206-333)||(8387-8511)
[»] scaffold0110 (2 HSPs)
scaffold0110 (10-110)||(45360-45460)
scaffold0110 (18-110)||(46802-46894)
[»] scaffold0034 (1 HSPs)
scaffold0034 (211-333)||(83111-83230)
[»] scaffold0376 (1 HSPs)
scaffold0376 (206-430)||(11526-11750)
[»] scaffold0251 (1 HSPs)
scaffold0251 (30-99)||(8264-8333)
[»] scaffold0176 (1 HSPs)
scaffold0176 (159-197)||(8472-8510)
[»] scaffold0496 (1 HSPs)
scaffold0496 (210-306)||(11328-11421)
[»] scaffold0086 (1 HSPs)
scaffold0086 (317-430)||(53955-54066)
[»] scaffold0326 (1 HSPs)
scaffold0326 (159-192)||(16615-16648)
[»] scaffold0154 (1 HSPs)
scaffold0154 (66-99)||(28711-28744)


Alignment Details
Target: scaffold0234 (Bit Score: 225; Significance: 1e-124; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 2265 - 2041
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2265 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 2166  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 2066  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  2065 gttgatgggtactccatgaatcatg 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 11156 - 10932
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11156 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 11057  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11056 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 10957  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  10956 gttgatgggtactccatgaatcatg 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 2528 - 2490
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaat 2490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 11419 - 11381
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaat 11381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 434
Target Start/End: Complemental strand, 25934 - 25706
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25934 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 25835  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25834 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 25735  T
Q  406 gttgatgggtactccatgaatcatgatga 434  Q
    ||||||||||||||||| |||||||||||    
T  25734 gttgatgggtactccataaatcatgatga 25706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 26197 - 26159
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaat 26159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 17684413 - 17684189
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684413 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 17684314  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684313 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 17684214  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  17684213 gttgatgggtactccatgaatcatg 17684189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 17691384 - 17691160
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691384 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 17691285  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691284 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 17691185  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  17691184 gttgatgggtactccatgaatcatg 17691160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 27296892 - 27297116
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27296892 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 27296991  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27296992 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 27297091  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  27297092 gttgatgggtactccatgaatcatg 27297116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27381196 - 27380972
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381196 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 27381097  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381096 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 27380997  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  27380996 gttgatgggtactccatgaatcatg 27380972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27471579 - 27471355
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471579 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 27471480  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471479 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 27471380  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  27471379 gttgatgggtactccatgaatcatg 27471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 11651986 - 11652210
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11651986 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcataatgatagtggtgta 11652085  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11652086 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 11652185  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  11652186 gttgatgggtactccatgaatcatg 11652210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 29309153 - 29309377
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309153 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 29309252  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309253 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcaggtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 29309352  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  29309353 gttgatgggtactccatgaatcatg 29309377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 29316113 - 29316336
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316113 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 29316212  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316213 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtc-agtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 29316311  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  29316312 gttgatgggtactccatgaatcatg 29316336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 208 - 429
Target Start/End: Complemental strand, 16559414 - 16559193
Alignment:
Q  208 aggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtatt 307  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16559414 aggagtaatatttatattggattgatccaccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtatt 16559315  T
Q  308 ccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggt 407  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16559314 ccacccttcgacctgaaaccgctatgtaccgtagatgttggagtcgagtgttttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggt 16559215  T
Q  408 tgatgggtactccatgaatcat 429  Q
    ||||||||||||||||||||||    
T  16559214 tgatgggtactccatgaatcat 16559193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 206 - 426
Target Start/End: Complemental strand, 25537135 - 25536915
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25537135 ttaggtgtcatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgacagtggtgta 25537036  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25537035 ttccacccttcgacctgaaaccactatttaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgattataaagttg 25536936  T
Q  406 gttgatgggtactccatgaat 426  Q
    |||||||||||||||||||||    
T  25536935 gttgatgggtactccatgaat 25536915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 188921 - 188697
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  188921 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 188822  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||| ||||||| |||||||||||||||    
T  188821 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgttatcattcaaatattgtctgtaacagaatgactataaagttg 188722  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
     ||||||| |||||||| |||||||    
T  188721 attgatggatactccataaatcatg 188697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 16394389 - 16394165
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16394389 ttaggagtaatatttatattggattgacccaccatgagaatactacgtagtaaaagttatgaaaagtgtcataagatattcttatagtgatagtggtgta 16394290  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  16394289 ttccaccctttgacttgaaaccactatgtaccctagatgttggaatcgagtgctttgtcaccattcaaacgttgtctgtaacaagatgactataaagttg 16394190  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  16394189 gttgatgggtactccatgaatcatg 16394165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 272 - 413
Target Start/End: Complemental strand, 13359152 - 13359010
Alignment:
Q  272 tgtcataagatattctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccatt 370  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||  || |     
T  13359152 tgtcataaattattctcatagtgataagtggtgtattccacccttcgacctgaaaccactatgtaccttagatgtaggagtcgagtattttgttgccgta 13359053  T
Q  371 caaacgttgtccgtaacaggatgactataaagttggttgatgg 413  Q
    ||||| | ||||||||||||||||||||||||| |||||||||    
T  13359052 caaacatcgtccgtaacaggatgactataaagtcggttgatgg 13359010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27508567 - 27508347
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||| ||||||||||| || |  |||||||||||||||||||  |||||||||| |||||||||||||||||| | ||||| |  ||||    
T  27508567 ttaggagtaatatttgtattggattgacccactgtgagaatactacatagtaa--gttatgaaaa-tgtcataagatattctcacaatgataataatgta 27508471  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  27508470 tatcgctcttagacctgaaaccactatgatctctagatgt-ggattcaagtgctttgttgccattctaacgttgtctgtaaaaggataaaaataacgttg 27508372  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  27508371 gttgatgggtacttgatgaatcatg 27508347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 1586328 - 1586108
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  1586328 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 1586232  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  1586231 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 1586133  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  1586132 gttgatgggtacttgatgaatcatg 1586108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 16789153 - 16789373
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  16789153 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 16789249  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||   ||||| ||||||||| |||| ||||| || |||| ||||    
T  16789250 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgtcattctaacgttgtctgtaaaaggataacaataacgttg 16789348  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  16789349 gttgatgggcacttgatgaatcatg 16789373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 22860108 - 22859888
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  22860108 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 22860012  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || |||| |||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  22860011 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgttttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 22859913  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  22859912 gttgatgggcacttgatgaatcatg 22859888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 11190394 - 11190488
Alignment:
Q  12 ttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  11190394 ttatgtagcttaaaag--acactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaa-cctta-tttgataggtttg 11190488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 416
Target Start/End: Complemental strand, 27528153 - 27527947
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||| ||||||||||| || |  |||||||||||||||||  |||||||||||| |||||||||||||||||| | ||||| |  ||||    
T  27528153 ttaggagtaatatttgtattggattgacccactgtgagaatactacatagt--aagttatgaaaa-tgtcataagatattctcacaatgataataatgta 27528057  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  27528056 tatcgctcttagacctgaaaccactatgatctctagatg-tggattcaagtgctttgttgccattctaacgttgtctgtaaaaggataaaaataacgttg 27527958  T
Q  406 gttgatgggta 416  Q
    |||||||||||    
T  27527957 gttgatgggta 27527947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 408
Target Start/End: Complemental strand, 10359264 - 10359073
Alignment:
Q  212 gtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccac 311  Q
    |||||||||||| ||||| || || || ||| ||||||||||||||   ||||||||  ||||||||||||||||||| | ||||| |||||||| ||||    
T  10359264 gtaatatttatactggatcgacccaccgtgaaaatactacatagtat--gttatgaa--gtgtcataagatattctcacaatgataatggtgtataccac 10359169  T
Q  312 ccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggtt 408  Q
     ||| ||| |||||||||||||  ||||||||| |||| ||| ||||||| |   ||||||||| |||||||||||||||| || || |||||||||    
T  10359168 tcttagacttgaaaccactatgatccctagatg-tggactcgtgtgctttattgtcattcaaacattgtccgtaacaggataaccattaagttggtt 10359073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 209 - 430
Target Start/End: Original strand, 14074565 - 14074782
Alignment:
Q  209 ggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattc 308  Q
    ||||||||||||||| |||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||| ||| | |||||   ||||||      
T  14074565 ggagtaatatttataatggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattttcacaatgataaaagtgtatat 14074661  T
Q  309 cacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggtt 408  Q
      | ||| |||||||||||||||||  ||||||||| | || || ||||||||||  || ||| ||| ||||| |||| ||||| || |||| |||||||    
T  14074662 tgctcttagacctgaaaccactatgatccctagatg-tagactcaagtgctttgttgcctttctaacattgtctgtaaaaggataaccataacgttggtt 14074760  T
Q  409 gatgggtactccatgaatcatg 430  Q
    ||||||||||  ||||||||||    
T  14074761 gatgggtacttgatgaatcatg 14074782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 3535927 - 3536025
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| ||| ||||||||||||||||  ||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  3535927 acttatgcagcctaagaggcacactttt--attcattaataatattcgagattttctctcaatttctggtggattccgg-aacccttattttgataggtt 3536023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 3542138 - 3542236
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| ||| ||||||||||||||||  ||||| ||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  3542138 acttatgcagcctaagaggcacactttt--attcattaataatattcgagattttctctcaatttctggtggattccgg-aacccttattttgataggtt 3542234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 8612997 - 8613221
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||| ||||| || || || ||||||||||||||||||   ||||||| |   | |||||||||||||||||| | ||||| | ||    
T  8612997 ttaggagtaatatttatactggatagacccaccgtgagaatactacatagtac--gttatgagattaattgtcataagatattctcacaatgataatagt 8613094  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||  | | ||| |||||||||||||||||  ||||||||| |||| || |||  |||||  || ||| ||||||||| |||| ||||| || ||||      
T  8613095 gtatatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtattttgtttcccttctaacgttgtctgtaaaaggataaccataaca 8613193  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||  ||||||||||    
T  8613194 ttggttgatgggtacttgatgaatcatg 8613221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 30052094 - 30052194
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| |||||||||| |||||||||| ||||| ||| | |||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||    
T  30052094 acttatgcagcttaagagacacacttttttattcattaataatattcgagattttctctcaatttttggtggattccgg-aaccctaattttgataggtt 30052192  T
Q  109 tg 110  Q
    ||    
T  30052193 tg 30052194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 386
Target Start/End: Complemental strand, 18020061 - 18019885
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  18020061 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 18019965  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaa 386  Q
    |  | | ||| ||||||||| |||||||  | ||||||| | || || ||| ||||||  |||||| ||||||||| ||||    
T  18019964 tatcgctcttagacctgaaatcactatgatctctagatg-tcgactcaagtactttgttgccattctaacgttgtctgtaa 18019885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 30049815 - 30049907
Alignment:
Q  18 agcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||||||| |||||||||| ||||| ||| | |||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||    
T  30049815 agcttaagagacacacttttttattcattaataatattcgagattttctctcaatttttggtggattccgg-aaccctaattttgataggtttg 30049907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 420
Target Start/End: Original strand, 2669556 - 2669768
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||||||||||||||||||| ||||||  |  ||||| ||||||||||||  || ||| |  || || ||||||| |||||||||||||| | || ||||    
T  2669556 ttaggagtaatatttatatttgattgacacatcatgaaaatactacatag--aatgttgtttaa-gtatcataagttattctcatagtgacaagttgtgt 2669652  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    |||||||  || ||||||||| || ||||||| |||||||| ||||||  || ||||||   | |||||| ||| ||  ||||||||||||||||||||     
T  2669653 attccactatttgacctgaaatcattatgtactctagatgtaggagtccggtactttgttgtcgttcaaatgttatctataacaggatgactataaagtc 2669752  T
Q  405 ggttgatgggtactcc 420  Q
     |||||| ||||||||    
T  2669753 agttgattggtactcc 2669768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 361
Target Start/End: Original strand, 8510186 - 8510338
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| ||||||||||||||| |||||| |  | |||| ||||||||||||  || |||||| || ||||||| || || |||||||||||| |||||| |    
T  8510186 ttagaagtaatatttatatttgattgacctacaatgataatactacatag--aatgttatgtaa-gtgtcattagttactctcatagtgatggtggtgca 8510282  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgcttt 361  Q
    || ||  ||||| |||| |||||||||||||| ||||||| |||||||||| ||||    
T  8510283 ttacatgcttcggcctggaaccactatgtaccttagatgtaggagtcgagtacttt 8510338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 345
Target Start/End: Complemental strand, 20736549 - 20736413
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||||||  | ||||||||||||||| |  | | |||||||| |||||||||||||||||| ||||||| | |||||    
T  20736549 ttaggagtaatatttatactggattgatccatcgtgagaatactacatatt--atgctatgaaaa-tgtcataagatattctcacagtgataatagtgta 20736453  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    |  ||| ||| ||||| |||| ||||||  ||||||||||    
T  20736452 tatcactcttagacctaaaactactatgatccctagatgt 20736413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 2339245 - 2339157
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||| ||| |||||||||  |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  2339245 acttatgcagcctaagaggcat-ctttttcattcaataaaattat-cgagacttttctctcaattctggtggatttcggaaacccttattt 2339157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 29340984 - 29340904
Alignment:
Q  30 acactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||| ||||| ||| | ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  29340984 acacttttt-attcattaataatattcgagacttttctctcaattctagtggattccggaaacctttattttgataggtttg 29340904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 430
Target Start/End: Original strand, 33317055 - 33317167
Alignment:
Q  317 gacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggta 416  Q
    |||||||||||||||||  |||||||||| ||| || ||| ||||||  |||||| ||||||||| |||| ||||| || |||| |||||||||||||||    
T  33317055 gacctgaaaccactatgatccctagatgt-ggactcaagtactttgtttccattctaacgttgtctgtaaaaggataaccataacgttggttgatgggta 33317153  T
Q  417 ctccatgaatcatg 430  Q
    ||  ||||||||||    
T  33317154 cttgatgaatcatg 33317167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 430
Target Start/End: Complemental strand, 17120724 - 17120505
Alignment:
Q  207 taggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtat 306  Q
    |||||||| |||||||| |||||||| || |  ||||||| ||| ||||||   |||||||||  |||||||||||||||||| | ||||| |  |||||    
T  17120724 taggagtagtatttatactggattgacccactgtgagaatgctaaatagtat--gttatgaaat-tgtcataagatattctcacaatgataataatgtat 17120628  T
Q  307 tccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttgg 406  Q
      | | ||| |||||||||||||||||  ||||| |||| ||| || ||||||||||   ||||| ||||||||| || | ||||| || |||| |||||    
T  17120627 atcgctcttagacctgaaaccactatgatccctatatgt-ggactcaagtgctttgttgtcattctaacgttgtctgtcaaaggataaccataacgttgg 17120529  T
Q  407 ttgatgggtactccatgaatcatg 430  Q
    ||||||||| ||  ||||||||||    
T  17120528 ttgatgggtgcttgatgaatcatg 17120505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 333
Target Start/End: Original strand, 21994674 - 21994794
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||| |||| ||| || |||||||||||||| |||||  | |||||||||| |||||||||||||| ||| | ||||| ||||||||  |    
T  21994674 gagtaatatttatactggaatgacccaccatgagaatactaaatagt--atgttatgaaaa-tgtcataagatattttcacaatgataatggtgtatatc 21994770  T
Q  310 acccttcgacctgaaaccactatg 333  Q
    || ||| |||||||||| ||||||    
T  21994771 actcttagacctgaaacgactatg 21994794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 26571062 - 26571130
Alignment:
Q  31 cactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||| || |||||||||||||||||||||||||||||||||||| | |||||||| |||||| |||||    
T  26571062 cacttattcattcaataaaattattcgagattttctctcaattctagcggattccgaaaacccctattt 26571130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 3565630 - 3565726
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    |||||||||||  |||||||||   |||| ||||||||||| ||||||||| |||||||||||||||||||||||  |||||| |||| |||||||||||    
T  3565630 acttatgtagccaaagaggcac---ttttcattcaataaaaatattcgagacttttctctcaattctggtggattttggaaactctta-tttgataggtt 3565725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 28172899 - 28172963
Alignment:
Q  289 atagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtc 352  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||    
T  28172899 atagtgataagtggtgtattccacccttcgaccggaaaccagtatgtaccctagatataggagtc 28172963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 413
Target Start/End: Complemental strand, 28756283 - 28756145
Alignment:
Q  274 tcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaa 373  Q
    |||||| ||||||||||||||||| || | |||  || |||  |||||||||||||| |||||| || |||| ||||||  || |||| |||||| ||||    
T  28756283 tcataaaatattctcatagtgataatgatttatctcatcctatgacctgaaaccactgtgtaccatatatgtaggagtcatgtactttatcacca-tcaa 28756185  T
Q  374 acgttgtccgtaacaggatgactataaagttggttgatgg 413  Q
    | |||||  |||||| |||| ||||||||| |||||||||    
T  28756184 atgttgtatgtaacaagatgcctataaagtcggttgatgg 28756145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 27381459 - 27381421
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaat 27381421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 27471842 - 27471804
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaat 27471804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 29308890 - 29308928
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaat 29308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 29315850 - 29315888
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaat 29315888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 189182 - 189146
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaat 189146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 345
Target Start/End: Complemental strand, 5758701 - 5758565
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||| ||||| |  |||||||||||||||||  | |||||| | | || ||||||||||||||| | | ||| | |||||    
T  5758701 ttaggagtaatatttatactggatagatccactgtgagaatactacatagt--acgttatg-agattgccataagatattctcacaattataatagtgta 5758605  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    |  | | ||| |||||||||||||||||  ||||||||||    
T  5758604 tatcgctcttagacctgaaaccactatgatccctagatgt 5758565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 16566525 - 16566489
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaat 16566489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 17684674 - 17684638
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaat 17684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 25537364 - 25537328
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaat 25537328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 17691647 - 17691609
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaat 17691609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 17850379 - 17850321
Alignment:
Q  269 aagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaacc 327  Q
    |||| ||||||| |||||| |||||||||||| ||||| |||||||| |||||||||||    
T  17850379 aagtatcataagttattcttatagtgatagtgatgtataccaccctttgacctgaaacc 17850321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 22560404 - 22560311
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||| || ||||| |  | ||||||| ||||||||||  | |||||||||| |||||||||||||||||| | ||||| ||||    
T  22560404 ttaggagtaatatttatactgtattgacctactatgagaacactacatagt--atgttatgaaaa-tgtcataagatattctcacaatgataatggt 22560311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 11651725 - 11651761
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||||||||||||||||| |||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaat 11651761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 333
Target Start/End: Original strand, 4073664 - 4073781
Alignment:
Q  212 gtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccac 311  Q
    |||||||||||||| |||||| |  || ||||||||||||||| ||   |||||||||| |  ||||||||||||||||| |||||  | ||||| |||     
T  4073664 gtaatatttatatttgattgacctaccgtgagaatactacataatat--gttatgaaaatt--cataagatattctcataatgataacgatgtataccaa 4073759  T
Q  312 ccttcgacctgaaaccactatg 333  Q
     ||| ||||| |||||||||||    
T  4073760 tcttagacctaaaaccactatg 4073781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 19218540 - 19218630
Alignment:
Q  240 tgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatg 333  Q
    ||||||||||||||||||   |||||||||| | |||||||||||||||| | ||||| || | ||| | || ||| |||||||||||||||||    
T  19218540 tgagaatactacatagtat--gttatgaaaatt-tcataagatattctcagaatgataatgatatatactactcttagacctgaaaccactatg 19218630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 19232329 - 19232363
Alignment:
Q  66 tctcaattctggtggattccggaaacccttatttt 100  Q
    |||||||| ||||||||||||||||||||||||||    
T  19232329 tctcaattttggtggattccggaaacccttatttt 19232363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 13645955 - 13645918
Alignment:
Q  62 tttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  13645955 tttctctcaattctgttagattccggaaacccttattt 13645918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 13359474 - 13359438
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaat 13359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 24695410 - 24695186
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695410 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 24695311  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695310 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 24695211  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  24695210 gttgatgggtactccatgaatcatg 24695186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 19714442 - 19714218
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19714442 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagttgtgta 19714343  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19714342 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtccgtaacaggatgactataaagttg 19714243  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||||||| |||||||||||    
T  19714242 gttgatgggtactacatgaatcatg 19714218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 18569805 - 18569581
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18569805 ttaggagtaatatttatattggattgacccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattatcatagtgatagtggtgta 18569706  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  18569705 ttccacccttcgacctgaaaccactatgtaccctacatgttggagtcgagtgctttatcaccattcaaatgttgtccgtaacaggatgactataaaattg 18569606  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||||||| |||||||||||    
T  18569605 gttgatgggtacttcatgaatcatg 18569581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 207 - 430
Target Start/End: Complemental strand, 19707161 - 19706939
Alignment:
Q  207 taggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtat 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  19707161 taggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagattttctcatagtgataattgtgtat 19707062  T
Q  307 tccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttgg 406  Q
    |||||||||||||||| ||  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  19707061 tccacccttcgacctg-aataactatgtaccctagatattggagtcgagtgctctgtcaccattcaaacgttgtccgtaacaagatgactataaagttgg 19706963  T
Q  407 ttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||||||||||    
T  19706962 ttgatgggtactccatgaatcatg 19706939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 256 - 434
Target Start/End: Complemental strand, 27347428 - 27347252
Alignment:
Q  256 taaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgag 355  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  27347428 taaaagttatgaaa-gtgtcataagatattctcatagtgatagttgtgtattccaccctttgacacgaaaccactatgtaccctagatgttggagtcgag 27347330  T
Q  356 tgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatgatga 434  Q
    || |||||||||||||||| ||| ||  ||||| |||||| ||||||||||||||||||||||||| ||||||||||||    
T  27347329 tgttttgtcaccattcaaatgttatctttaacaagatgac-ataaagttggttgatgggtactccacgaatcatgatga 27347252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 17298839 - 17298621
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtattc 308  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||  ||||||||| ||| ||||||||| |||||||||||||||| |||| ||||||    
T  17298839 gagtaatatttatattggattgacccaccatgagaatactacgtag--aaagttatgtaaa-tgtcataagttattctcatagtgataagtggcgtattc 17298743  T
Q  309 cacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggtt 408  Q
    |||||||| ||||||||||| |||||||||||| | | |||||||||| ||||||  || | |||||||||||||||| |||||||||||||| | ||||    
T  17298742 cacccttcaacctgaaaccaatatgtaccctaggtttaggagtcgagtactttgtttccgtacaaacgttgtccgtaataggatgactataaaatcggtt 17298643  T
Q  409 gatgggtactccatgaatcatg 430  Q
    ||||||| |||||||| |||||    
T  17298642 gatgggtgctccatgattcatg 17298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 24702057 - 24701950
Alignment:
Q  323 aaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccat 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24702057 aaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccat 24701958  T
Q  423 gaatcatg 430  Q
    ||||||||    
T  24701957 gaatcatg 24701950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 40778984 - 40778884
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40778984 acttatgtagtctaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccagaaacccttattttgataggttt 40778885  T
Q  110 g 110  Q
    |    
T  40778884 g 40778884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 17285688 - 17285470
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtattc 308  Q
    ||||||||||||||||||||||| || | |||||||||||||||||  ||||||||| | | | ||||||| |||| ||||||||||| ||||| |||||    
T  17285688 gagtaatatttatattggattgacccacaatgagaatactacatag--aaagttatgtata-tatcataagttattatcatagtgataagtggtatattc 17285592  T
Q  309 cacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggtt 408  Q
    ||| ||||||||||||| || |||||||||||| | | ||| |||||| ||||||  || | ||||| |||||||||| |||||||||||||| | ||||    
T  17285591 cactcttcgacctgaaatcaatatgtaccctaggtttaggattcgagtactttgtttccgtacaaactttgtccgtaataggatgactataaaatcggtt 17285492  T
Q  409 gatgggtactccatgaatcatg 430  Q
    ||||||| |||||||| |||||    
T  17285491 gatgggtgctccatgattcatg 17285470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 39538851 - 39538953
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  39538851 ttaggagtaatatttatattggattgacccaccatgaaaatactacatagtaaaagttatgaaaagtgtcataaaatattctcatagtgatagtggtata 39538950  T
Q  306 ttc 308  Q
    |||    
T  39538951 ttc 39538953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 22941332 - 22941552
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  22941332 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 22941428  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  22941429 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 22941527  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  22941528 gttgatgggtacttgatgaatcatg 22941552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 20941109 - 20941329
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  20941109 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 20941205  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||   ||||| ||||||||| |||| ||||| |  |||| ||||    
T  20941206 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgtcattctaacgttgtctgtaaaaggataatcataacgttg 20941304  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  20941305 gttgatgggtacttgatgaatcatg 20941329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 25805605 - 25805385
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  25805605 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 25805509  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | |||  ||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  25805508 tatcgctcttacacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 25805410  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  25805409 gttgatgggtacttgatgaatcatg 25805385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 430
Target Start/End: Original strand, 31096899 - 31097118
Alignment:
Q  207 taggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtat 306  Q
    |||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  |||||    
T  31096899 taggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgtat 31096995  T
Q  307 tccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttgg 406  Q
      | | ||| |||||||||||| ||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| |||||    
T  31096996 atcgctcttagacctgaaaccattatgatccctagatg-tggaatcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttgg 31097094  T
Q  407 ttgatgggtactccatgaatcatg 430  Q
    ||||||||||||  ||||||||||    
T  31097095 ttgatgggtacttgatgaatcatg 31097118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 31981 - 32201
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  31981 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 32077  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  32078 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 32176  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  32177 gttgatgggcacttgatgaatcatg 32201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 12789883 - 12789663
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  12789883 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 12789787  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |  | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  12789786 tactgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 12789688  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  12789687 gttgatgggtacttgatgaatcatg 12789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 23546004 - 23546224
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  23546004 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 23546100  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  23546101 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 23546199  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  23546200 gttgatgggcacttgatgaatcatg 23546224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 418
Target Start/End: Complemental strand, 20100463 - 20100255
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||| ||||| ||| |||| ||  | |||||| |||||||||||   |||||||||| |||||||||||||||||| | ||||| |||||||    
T  20100463 ttaggagtaatacttatactggcttgacccaacgtgagaaaactacatagtat--gttatgaaaa-tgtcataagatattctcacaatgataatggtgta 20100367  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||| ||| ||| |||||||||||||  ||| ||||| |||| || |||||||| |  |||||||||||||||| |||| ||||| || |||| ||||    
T  20100366 taccactcttagacatgaaaccactatgatcccaagatg-tggactcaagtgctttattgccattcaaacgttgtctgtaaaaggataaccataatgttg 20100268  T
Q  406 gttgatgggtact 418  Q
    |||||||||||||    
T  20100267 gttgatgggtact 20100255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 24933526 - 24933306
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  24933526 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 24933430  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  24933429 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 24933331  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  24933330 gttgatgggtacttgatgaatcatg 24933306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 343
Target Start/End: Complemental strand, 18806618 - 18806483
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||| |||||| |||||||||||||||||| ||||||||||  |||||||  |||||| || ||  ||||||||| |||||||||||||||| ||| |||    
T  18806618 ttagaagtaatgtttatattggattgatccaccatgagaatgatacatag--aaagttttgtaac-tgtcataagttattctcatagtgataagtgatgt 18806522  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagat 343  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  18806521 attccacccttcaacctgaaaccactatgtacactagat 18806483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 343
Target Start/End: Complemental strand, 18806798 - 18806663
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||| |||||| |||||||||||||||||| ||||||||||  |||||||  |||||| || ||  ||||||||| |||||||||||||||| ||| |||    
T  18806798 ttagaagtaatgtttatattggattgatccaccatgagaatgatacatag--aaagttttgtaac-tgtcataagttattctcatagtgataagtgatgt 18806702  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagat 343  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  18806701 attccacccttcaacctgaaaccactatgtacactagat 18806663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 343
Target Start/End: Complemental strand, 18806978 - 18806843
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||| |||||| |||||||||||||||||| ||||||||||  |||||||  |||||| || ||  ||||||||| |||||||||||||||| ||| |||    
T  18806978 ttagaagtaatgtttatattggattgatccaccatgagaatgatacatag--aaagttttgtaac-tgtcataagttattctcatagtgataagtgatgt 18806882  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagat 343  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  18806881 attccacccttcaacctgaaaccactatgtacactagat 18806843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 21849168 - 21849079
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttatttt 100  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  21849168 acttatgtagcctaa-aggtacactttttgattcaataaaattattcgagattttctctcaattctagtggattccgaaaacacttatttt 21849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 12765214 - 12764990
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||||||||| || || || |||||||||||||||||||  ||||||| |   | |||||||||| ||||||| | ||||| | ||    
T  12765214 ttaggagtaatatttatattggatagacccaccgtgagaatactacatagtaa--gttatgagattaattgtcataagacattctcacaatgataatagt 12765117  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||  | | ||| |||||||||||||||||  | || ||||| ||| || ||| ||||||  |||||| ||||||||| |||| || || || |||| |    
T  12765116 gtatatcgctcttagacctgaaaccactatgatctcttgatgt-ggactcaagtactttgtttccattctaacgttgtctgtaaaagaataaccataacg 12765018  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||  ||||||||||    
T  12765017 ttggttgatgggtacttgatgaatcatg 12764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 430
Target Start/End: Original strand, 5097737 - 5097953
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||| | || || |||||||||||||||||  | |||||| ||| ||||||||| |||||||| | ||||| | ||||||  |    
T  5097737 gagtaatatttatattggattaacccaccgtgagaatactacatagt--atgttatg-aaattgtcataagttattctcacaatgataatagtgtatatc 5097833  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
     | ||| |||||||||||||||||  ||| ||||| |||| || ||||||||||  |||||| ||||||||  |||| ||||| || |||| ||| ||||    
T  5097834 gctcttagacctgaaaccactatgatcccgagatg-tggactcaagtgctttgttgccattctaacgttgtatgtaaaaggataaccataacgtttgttg 5097932  T
Q  410 atgggtactccatgaatcatg 430  Q
    ||||||||   ||||||||||    
T  5097933 atgggtacatgatgaatcatg 5097953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 7865654 - 7865430
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||| ||||| || || || ||||||||||||||||||   ||||||| |   | |||||||||||||||||| | ||||| | ||    
T  7865654 ttaggagtaatatttatactggatagacccaccgtgagaatactacatagtac--gttatgagattaattgtcataagatattctcacaatgataatagt 7865557  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||  | | ||| |||||||||||||||||  ||||||||| |||| || |||  |||||  || ||| ||||||||| |||| ||||| || ||||      
T  7865556 gtatatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtattttgtttcccttctaacgttgtctgtaaaaggataaccataaca 7865458  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||  ||||||||||    
T  7865457 ttggttgatgggtacttgatgaatcatg 7865430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 9811957 - 9811733
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||||||||| || || || ||||||||||||||||||   ||||||| |   | ||||||||||| |||||| | ||||| | ||    
T  9811957 ttaggagtaatatttatattggatagacccaccgtgagaatactacatagtac--gttatgagattaattgtcataagattttctcacaatgataatagt 9811860  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||  | | ||| |||||||||||||||||  | || ||||| ||| || ||| ||||||  |||||| ||||||||| |||| || || || |||| |    
T  9811859 gtatatcgctcttagacctgaaaccactatgatctcttgatgt-ggactcaagtactttgtttccattctaacgttgtctgtaaaagaataaccataacg 9811761  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||  ||||||||||    
T  9811760 ttggttgatgggtacttgatgaatcatg 9811733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 12704098 - 12703874
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||||||||| || || || ||||||||||||||||||   ||||||| |   | ||||||||||| |||||| | ||||| | ||    
T  12704098 ttaggagtaatatttatattggatagacccaccgtgagaatactacatagtac--gttatgagattaattgtcataagattttctcacaatgataatagt 12704001  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||  | | ||| |||||||||||||||||  | || ||||| ||| || ||| ||||||  |||||| ||||||||| |||| || || || |||| |    
T  12704000 gtatatcgctcttagacctgaaaccactatgatctcttgatgt-ggactcaagtactttgtttccattctaacgttgtctgtaaaagaataaccataacg 12703902  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||  ||||||||||    
T  12703901 ttggttgatgggtacttgatgaatcatg 12703874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 28719558 - 28719471
Alignment:
Q  345 ttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatgatga 434  Q
    ||||||||||||||||| ||||| | ||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||||    
T  28719558 ttggagtcgagtgctttatcaccgt-caaacgttgtctgtaacaagatgac-ataaagttggttgatgggtactccacgaatcatgatga 28719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 434
Target Start/End: Complemental strand, 26129909 - 26129689
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||| |||||||| || || ||| ||||| ||||||||   |||||||||| ||| |||||||||||||| | ||||| ||||||||  |    
T  26129909 gagtaatatttatactggattgacccaccgtgaaaataccacatagtat--gttatgaaaa-tgtaataagatattctcacattgataatggtgtatatc 26129813  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    || ||| ||| |||||||||||||  | ||||||| |||| || |||||||| |  |||||| ||| |||||  ||| | ||| || |||| ||||| |     
T  26129812 actcttagacatgaaaccactatgatcactagatg-tggactcaagtgctttattgccattctaacattgtctataaaaagataaccataacgttggcta 26129714  T
Q  410 atgggtactccatgaatcatgatga 434  Q
    |||||||||  ||||||||||||||    
T  26129713 atgggtacttaatgaatcatgatga 26129689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 430
Target Start/End: Complemental strand, 18829497 - 18829281
Alignment:
Q  214 aatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgat-agtggtgtattccacc 312  Q
    ||||||||||||||||||| || ||||||||||  |||||||  |||||||||  ||||  |||||| |||||||||| |||| |||||||||||||| |    
T  18829497 aatatttatattggattgacccaccatgagaatgatacatag--aaagttatg-taagttccataagttattctcataatgataagtggtgtattccatc 18829401  T
Q  313 cttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttgg---ttg 409  Q
     || ||||| |||||||||||||| || |||||  |||||| || ||||||   | | |||| ||  ||  ||| | |||||||||||||||||   |||    
T  18829400 atttgacctaaaaccactatgtacact-gatgtgagagtcgtgtactttgttgtcgtacaaatgtcatctataaaatgatgactataaagttggttattg 18829302  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||||||||||||| ||||||    
T  18829301 atgggtactccatggatcatg 18829281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 19677315 - 19677239
Alignment:
Q  22 taagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19677315 taagaggcacactttgt-attcaataaaat-attcgagacttttctctcaattctggtggattccgaaaacccttattt 19677239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 26245184 - 26245404
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | ||||||||| |  | |||||||| ||||||  | |||||| ||| |||||||||||||||||| | || || | |||||    
T  26245184 ttaggagtaatatttatacttgattgatccactgtcagaatactgcatagt--atgttatg-aaattgtcataagatattctcacaatgttaatagtgta 26245280  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||| ||||  | ||||||  |||| |  ||||||||||   ||||| ||||||||| |||| ||||| || |||  ||||    
T  26245281 tatcgctcttagacctgaaaccattatgatctctagat-atggacttaagtgctttgttgtcattctaacgttgtctgtaaaaggataaccatagcgttg 26245379  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  26245380 gttgatgggtacttgatgaatcatg 26245404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 39538954 - 39539035
Alignment:
Q  349 agtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||| |||||||||||| |||||  | || ||||||| |||||||||||||| | ||||||||| ||||||||    
T  39538954 agtcgagtgctttatcaccattcaaatgttgtttggaataggatgattataaagttggttggtaggtactccacgaatcatg 39539035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 297
Target Start/End: Complemental strand, 22546956 - 22546872
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata 297  Q
    ||||||||||||||||||||||| | |||||||||||||||||||  |||||||||| ||| | ||||||| |||| ||||| |||||    
T  22546956 gagtaatatttatattggattgaccagccatgagaatactacata--aaaagttatgtaaa-tatcataagttattttcataatgata 22546872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 24695673 - 24695635
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaat 24695635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 18570070 - 18570032
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaat 18570032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 19714703 - 19714669
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaa 195  Q
    ||||||||||||||||||||||||||| |||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaa 19714669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 39537962 - 39538000
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaat 39538000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 31652004 - 31651917
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata 297  Q
    |||||||||| ||| ||| |||||||| |  | ||||||||| |||||||||   ||||||||  || ||||||||||||||||||||||||    
T  31652004 ttaggagtaacattaataatggattgacctactatgagaatattacatagtat--gttatgaa--gtatcataagatattctcatagtgata 31651917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 35160899 - 35160836
Alignment:
Q  35 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 99  Q
    |||| ||||||||||||||| |||||  || ||| |||||||||||| ||| |||||||||||||    
T  35160899 ttttcattcaataaaattat-cgagaacttttcttaattctggtggaatcctgaaacccttattt 35160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 8858430 - 8858654
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858430 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 8858529  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858530 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 8858629  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  8858630 gttgatgggtactccatgaatcatg 8858654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18262475 - 18262699
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262475 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18262574  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262575 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18262674  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  18262675 gttgatgggtactccatgaatcatg 18262699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18269336 - 18269560
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269336 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18269435  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269436 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18269535  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  18269536 gttgatgggtactccatgaatcatg 18269560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 55612946 - 55613170
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612946 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 55613045  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55613046 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 55613145  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  55613146 gttgatgggtactccatgaatcatg 55613170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 868860 - 869084
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  868860 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgataatggtgta 868959  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868960 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 869059  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  869060 gttgatgggtactccatgaatcatg 869084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 19926704 - 19926480
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19926704 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaaatgtcataagatattctcatagtgatagtggtgta 19926605  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926604 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 19926505  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  19926504 gttgatgggtactccatgaatcatg 19926480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 26963903 - 26964127
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963903 ttagcagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 26964002  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26964003 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 26964102  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  26964103 gttgatgggtactccatgaatcatg 26964127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 26970726 - 26970950
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970726 ttagcagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 26970825  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970826 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 26970925  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  26970926 gttgatgggtactccatgaatcatg 26970950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10621277 - 10621053
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10621277 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtt 10621178  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10621177 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtccgtaacaggatgactataaagttg 10621078  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  10621077 gttgatgggtactccatgaatcatg 10621053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 210 - 430
Target Start/End: Original strand, 5707587 - 5707807
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707587 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 5707686  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5707687 atccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtccgtaacaggatgactataaagttggttg 5707786  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||    
T  5707787 atgggtactccatgaatcatg 5707807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 210 - 430
Target Start/End: Original strand, 5714215 - 5714435
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714215 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 5714314  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5714315 atccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtccgtaacaggatgactataaagttggttg 5714414  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||    
T  5714415 atgggtactccatgaatcatg 5714435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 8845466 - 8845690
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8845466 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataatatattctcatagtgatagtggtgta 8845565  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8845566 ttccatccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaatttg 8845665  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  8845666 gttgatgggtactccatgaatcatg 8845690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10628356 - 10628132
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  10628356 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgataatggtgtt 10628257  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10628256 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtccgtaacaggatgactataaagttg 10628157  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  10628156 gttgatgggtactccatgaatcatg 10628132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 28393078 - 28392854
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393078 ttagaagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 28392979  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28392978 ttccacccttcaacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 28392879  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||| |||||||||||||||||    
T  28392878 gttgatgagtactccatgaatcatg 28392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 5668071 - 5667849
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5668071 ttaggagtaatatttatactggattgactcaccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 5667972  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  5667971 ttccacccttagacctgaaaccactatgtaccctagatgttg--gtcgagtgctttgtcaccattcaaacgttgtctgtaacaagatgactataaagttg 5667874  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||| ||||||||    
T  5667873 gttgatgggtactccacgaatcatg 5667849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 35223823 - 35224047
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35223823 ttaggagtaatatttatactggattgaaccaccatgagaatactatatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtgttgta 35223922  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  35223923 ttccaccctttgacctgaaaccacgatgtaccttagatgttggagtcgagtgctttatcaacattcaaacgttgtctgtaacaagatgactataaagttg 35224022  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||| |||||||| ||||||||    
T  35224023 gttgatgtgtactccacgaatcatg 35224047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 4426548 - 4426336
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||            |||||||||||||||||||||    
T  4426548 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaatctatgaaaagt------------tctcatagtgatagtggtgta 4426461  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  4426460 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgttaccattcaaacattgtccgtaataggatgactataaagttg 4426361  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  4426360 gttgatgggtactccatgaatcatg 4426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10677526 - 10677303
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  10677526 ttaggagtaatatttatactggattgacccactatgagaatactacatagtaaatgttatgaaaaatgtcataagatattctcatagtgatagtggtgta 10677427  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    || ||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||  ||||||| |||||||||  |||| | |||||| |||||||||    
T  10677426 tttcaccctttgacttgaaaccactatgtatcctagatgtaggagtcgagtgctttaccaccatttaaacgttgtttgtaataagatgac-ataaagttg 10677328  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    || ||||||||||||||||| ||||    
T  10677327 gtagatgggtactccatgaaccatg 10677303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10891166 - 10890943
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  10891166 ttaggagtaatatttatactggattgacccactatgagaatactacatagtaaatgttatgaaaaatgtcataagatattctcatagtgatagtggtgta 10891067  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    || ||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||  ||||||| |||||||||  |||| | |||||| |||||||||    
T  10891066 tttcaccctttgacttgaaaccactatgtatcctagatgtaggagtcgagtgctttaccaccatttaaacgttgtttgtaataagatgac-ataaagttg 10890968  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    || ||||||||||||||||| ||||    
T  10890967 gtagatgggtactccatgaaccatg 10890943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 206 - 434
Target Start/End: Original strand, 20311555 - 20311781
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    ||||||||||| ||||||||||||||| | | ||||||||||||||||||  | ||||||| ||  | |||||   |||||||||||||||| |||||||    
T  20311555 ttaggagtaatttttatattggattgacctgtcatgagaatactacatag--acagttatgtaac-tatcatacattattctcatagtgataagtggtgt 20311651  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    |||||||||||| || |||||||||||| |||||||||||| ||| |||||| ||||||  || | ||||||||||||||| |||||||||||||||||     
T  20311652 attccacccttctacttgaaaccactatttaccctagatgtaggattcgagtactttgttcccgtacaaacgttgtccgtagcaggatgactataaagtc 20311751  T
Q  405 ggttgatgggtactccatgaatcatgatga 434  Q
    |||| || ||||||||| ||||||||||||    
T  20311752 ggttaatcggtactccacgaatcatgatga 20311781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 15461579 - 15461799
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  15461579 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 15461675  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  15461676 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 15461774  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  15461775 gttgatgggtacttgatgaatcatg 15461799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 34975633 - 34975853
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  34975633 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 34975729  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  34975730 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgtttccattctaacgttgtctgtaaaaggataaccataacgttg 34975828  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  34975829 gttgatgggtacttgatgaatcatg 34975853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 6659527 - 6659428
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6659527 acttatgtagcctaagaggca-actttttgattcactaaaactattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 6659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 2677095 - 2677315
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  2677095 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 2677191  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  2677192 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 2677290  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  2677291 gttgatgggcacttgatgaatcatg 2677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 15815103 - 15815323
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  15815103 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 15815199  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  15815200 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 15815298  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  15815299 gttgatgggcacttgatgaatcatg 15815323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 18111263 - 18111043
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  18111263 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 18111167  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  18111166 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 18111068  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  18111067 gttgatgggcacttgatgaatcatg 18111043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 26531695 - 26531915
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  26531695 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 26531791  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  26531792 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 26531890  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  26531891 gttgatgggcacttgatgaatcatg 26531915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 206 - 414
Target Start/End: Original strand, 19365601 - 19365806
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctca-tagtgatagtggtgt 304  Q
    |||||||||||||||||| |||||||| || || ||||| |||||||||||  | |||||| ||||||||||||||||||||||  | ||||| ||||||    
T  19365601 ttaggagtaatatttatactggattgacccaccgtgagagtactacatagt--atgttatg-aaagtgtcataagatattctcaccaatgataatggtgt 19365697  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    || |||| ||| |||||||||||| ||||  ||||||||| |||| || |||||||| |   ||||||||||||||| ||||||||||||| |||| |||    
T  19365698 ataccactcttagacctgaaaccattatgatccctagatg-tggactcaagtgctttattgtcattcaaacgttgtctgtaacaggatgaccataacgtt 19365796  T
Q  405 ggttgatggg 414  Q
     ||| |||||    
T  19365797 agttaatggg 19365806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 1941806 - 1942026
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||| | || || |||||||||||||||||  |||||||| | | |||||| ||||||||||| | ||||| | |||||    
T  1941806 ttaggagtaatatttatattggattaacccaccgtgagaatactacatagt--aagttatg-agattgtcatgagatattctcacaatgataatagtgta 1941902  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||| ||||||  |||||| || |||||| |||| ||||| || |||| ||||    
T  1941903 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtactttgttgccattctaatgttgtctgtaaaaggataaccataacgttg 1942001  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  1942002 gttgatgggtacttgatgaatcatg 1942026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 3369243 - 3369023
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||| ||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  3369243 ttaggagtaatatttgtattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 3369147  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | || ||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  3369146 tatcgctcttagacctgaaaccactatgatctcttgatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 3369048  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  3369047 gttgatgggtacttgatgaatcatg 3369023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 17300179 - 17299959
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  17300179 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 17300083  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  17300082 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 17299984  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||| | |||  ||||||||||    
T  17299983 gttgatgagcacttgatgaatcatg 17299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 20244019 - 20244239
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  20244019 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 20244115  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  20244116 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 20244214  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  20244215 gttgatgggtacttgatgaatcatg 20244239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 13085270 - 13085190
Alignment:
Q  30 acactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  13085270 acacttttttattcaataaaattattcgagattttctctcaattttggtggattccgaaaacccttattttgataggtttg 13085190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 329
Target Start/End: Complemental strand, 21454083 - 21453961
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||| ||  ||||||| ||| | |||||||||||| |||| ||||||||||||||    
T  21454083 ttaggagtaatatttatattgaattgacccaccatgagaatactacata-tatgagttatgtaaaatatcataagatattttcattgtgatagtggtgta 21453985  T
Q  306 ttccacccttcgacctgaaaccac 329  Q
    |  |||||||||||||||||||||    
T  21453984 tgtcacccttcgacctgaaaccac 21453961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 4676203 - 4675983
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  4676203 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 4676107  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||  ||||||||| |||| ||||| || |||| ||||    
T  4676106 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattataacgttgtctgtaaaaggataacaataacgttg 4676008  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  4676007 gttgatgggtacttgatgaatcatg 4675983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18163244 - 18163464
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||| | || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  18163244 ttagaagtaatatttatattggattcacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 18163340  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  18163341 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 18163439  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  18163440 gttgatgggtacttgatgaatcatg 18163464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 30040705 - 30040489
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||| | |||||| || |||||||| ||||||||||||   |||||||||| |||||||||||||||||| | ||||| | ||||||  |    
T  30040705 gagtaatatttatactagattgacccaccatgagagtactacatagtat--gttatgaaaa-tgtcataagatattctcacaatgataatagtgtatatc 30040609  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    || ||| |||||||||||||||||  ||||||||| |||| || ||||||||||   ||||| || |||||  |||| ||||| || |||| |||||||     
T  30040608 actcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgtcattctaatgttgtttgtaaaaggataaccataacgttggtta 30040510  T
Q  410 atgggtactccatgaatcatg 430  Q
    ||| |||||  ||||||||||    
T  30040509 atgagtacttgatgaatcatg 30040489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 22691203 - 22691302
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||||| ||||||||||||||||  ||||| ||| | ||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22691203 acttatgtagcctaagaggcacactttt--attcattaataatattcaagacttttctctcaattctggtggattccggaaacccttatttcgataggtt 22691300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 22716551 - 22716649
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    |||||||||||| |||||||||||||||  ||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22716551 acttatgtagct-aagaggcacactttt--attcattaataatattcgagacttttctctcaattctggtggattccggaaaccctttttttgataggtt 22716647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 5870500 - 5870720
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| ||||||| |||||||||| | ||||| |  ||||    
T  5870500 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcatatgatattctcacaatgataataatgta 5870596  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || |||| |||||   ||||| |||||||||  ||| ||||| || |||| ||||    
T  5870597 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgttttgttgtcattctaacgttgtctataataggataacaataacgttg 5870695  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||| |||||  ||||||||||    
T  5870696 gttgatgagtacttgatgaatcatg 5870720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 413
Target Start/End: Original strand, 19362492 - 19362695
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| ||  | ||||| |||||||||||  | |||||  |||||||||||||||||||||| | ||||| |||||||    
T  19362492 ttaggagtaatatttatactggattgacccatcgtgagagtactacatagt--atgttat-caaagtgtcataagatattctcacaatgataatggtgta 19362588  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||| |||  ||||||||||||||||  || |||||| |||| |  | |||||| |   ||||||||||||||| ||||||||||||| |||| | ||    
T  19362589 taccactcttaaacctgaaaccactatgatccttagatg-tggacttaaatgctttattgtcattcaaacgttgtctgtaacaggatgaccataacggtg 19362687  T
Q  406 gttgatgg 413  Q
    ||| ||||    
T  19362688 gttaatgg 19362695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 13086312 - 13086233
Alignment:
Q  31 cactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  ||||||| | |||| ||||||||||||||||||    
T  13086312 cactttttaattcaataaaattattcgagattttctctcaattctaatggattctgaaaactcttattttgataggtttg 13086233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 22988666 - 22988568
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    |||||||||||| |||||||||||||||  ||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  22988666 acttatgtagct-aagaggcacactttt--attcattaataatattcgagacttttctctcaattctggtggattccggaaacccttttttcgataggtt 22988570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 206 - 414
Target Start/End: Original strand, 5616477 - 5616681
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| ||||||||||||| |||||||| |  || ||||||||||||| |||  |  ||||| |||||||||||||||||||| | | ||||| |||||||    
T  5616477 ttagaagtaatatttatactggattgaccaaccgtgagaatactacagagttta--ttatg-aaagtgtcataagatattcttacaatgataatggtgta 5616573  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||  ||| || ||||||||||||||  ||||||||| |||| || |||||||| |  |||||||||||||||  |||||| ||| ||| ||| ||||    
T  5616574 taccaatcttagatctgaaaccactatgatccctagatg-tggactcaagtgctttattgccattcaaacgttgtttgtaacaagataactgtaacgttg 5616672  T
Q  406 gttgatggg 414  Q
    ||| |||||    
T  5616673 gttaatggg 5616681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 9487633 - 9487853
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||| || ||  | |||||||||||||||||||  ||||||| |  |||||||||||||||||| | ||||| | |||||    
T  9487633 ttaggagtaatatttatactggatagacccatcgtgagaatactacatagtaa--gttatgagat-tgtcataagatattctcacaatgataatagtgta 9487729  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || |||  |||||   ||||  ||||||||| |||| ||||| || ||||  |||    
T  9487730 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtattttgttgtcattataacgttgtctgtaataggataaccataacattg 9487828  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  9487829 gttgatgggtacttgatgaatcatg 9487853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 430
Target Start/End: Original strand, 11421096 - 11421309
Alignment:
Q  213 taatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacc 312  Q
    |||||||||||||||||||| || || | |||||||||||||||  | |||||||||| |||||||||||||| ||| || |||| |  |||||  |||     
T  11421096 taatatttatattggattgacccaccgttagaatactacatagt--atgttatgaaaa-tgtcataagatattatcacagggataataatgtatatcact 11421192  T
Q  313 cttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatg 412  Q
    | | |||||||||||||||||  || |||||| || | || |||||||| |   ||||| ||||||||| |||| ||||| || |||| ||||| | |||    
T  11421193 catagacctgaaaccactatgatccgtagatg-tgtactcaagtgctttattgtcattctaacgttgtctgtaaaaggataaccataatgttggctaatg 11421291  T
Q  413 ggtactccatgaatcatg 430  Q
    ||||||| ||||||||||    
T  11421292 ggtactcgatgaatcatg 11421309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 414
Target Start/End: Complemental strand, 5528699 - 5528495
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||| |||||||||||| ||| | ||  | ||||||||| || ||||| |  ||||||||| || ||||||||||||||||| ||||| |||||||    
T  5528699 ttaggagtgatatttatattgtattaacccaacgtgagaataccacgtagtata--ttatgaaaa-tgccataagatattctcataatgataatggtgta 5528603  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| |||  |||||||||  |||||  ||||||||| |||| || |||||||| |  ||||||||||||| || |||||||||| || |||| ||||    
T  5528602 taacactcttatacctgaaactgctatgatccctagatg-tggactcaagtgctttatttccattcaaacgttatctgtaacaggataaccataatgttg 5528504  T
Q  406 gttgatggg 414  Q
    ||| |||||    
T  5528503 gttaatggg 5528495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 414
Target Start/End: Original strand, 9538041 - 9538244
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| ||  | ||||||||||||||||   | |||||| |||||||||||||||||||||| | ||||| ||| ||     
T  9538041 ttaggagtaatatttatactggattgacccagcgtgagaatactacatag--catgttatg-aaagtgtcataagatattctcacaatgataatggcgt- 9538136  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
     ||||  ||| ||||| ||||||| |||  || | |||| |||| || |||||||| |  |||||||||| |||||||||||||||| || |||| ||||    
T  9538137 gtccagtcttagacctcaaaccaccatgatccttggatg-tggactcaagtgctttattgccattcaaacattgtccgtaacaggataaccataacgttg 9538235  T
Q  406 gttgatggg 414  Q
    ||| |||||    
T  9538236 gttaatggg 9538244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 32636570 - 32636685
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||| ||    |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |||||||| ||    
T  32636570 gagtaatatttatattggattgacccaatgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataatggtgtatacc 32636666  T
Q  310 acccttcgacctgaaacca 328  Q
    || || |||| ||||||||    
T  32636667 actctccgacgtgaaacca 32636685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 345
Target Start/End: Original strand, 4546162 - 4546298
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||  || || || |||||||||||||||||  |||||||| | | |||||||||||||||||| | ||||| | |||||    
T  4546162 ttaggagtaatatttatactggacagacccaccgtgagaatactacatagt--aagttatg-agattgtcataagatattctcacaatgataatagtgta 4546258  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    |  | | ||| ||||| |||||||||||  ||||||||||    
T  4546259 tatcgctctttgacctaaaaccactatgatccctagatgt 4546298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 2053212 - 2053116
Alignment:
Q  2 taaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctc-tcaattctggtggattccggaaacccttattt 99  Q
    ||||||| ||||||| ||| ||||||  | |||| || ||||||||||||||||||||| ||| || |||||||| ||||||| |||||||||||||||    
T  2053212 taaacataacttatgcagcctaagag--agacttattcattcaataaaattattcgagactttttcctcaattctagtggatttcggaaacccttattt 2053116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 5707320 - 5707358
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaat 5707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 5713948 - 5713986
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaat 5713986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 9596854 - 9596931
Alignment:
Q  32 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  9596854 actttttcattcaataagaatatttgagacttttctctcaattctggtggattatggaaaccctta-tttgataggttt 9596931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 10621540 - 10621502
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaat 10621502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 10628619 - 10628581
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaat 10628581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 12357136 - 12357174
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaat 12357174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 19926967 - 19926929
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaat 19926929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 24701361 - 24701411
Alignment:
Q  302 tgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtc 352  Q
    |||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  24701361 tgtattccacccttcgacctaaaaccactgtgtaccctagatgtaggagtc 24701411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 26963640 - 26963678
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaat 26963678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 26970463 - 26970501
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaat 26970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 32646745 - 32646523
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||||| ||||||||| |||||||||| |  |||| ||||| |||||||  ||| |||||| | |  |||| | || |||| | |||||||| |||||||    
T  32646745 ttaggaataatatttacattggattgacctaccataagaatgctacata--aaaggttatgtataa-gtcacatgacattcccgtagtgataagtggtgt 32646649  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    |||  ||||||||||||||||| ||| |||| ||| |||||  |||||| || ||||||   | | |||||||  ||| ||||||||||| ||| ||||     
T  32646648 attttacccttcgacctgaaacaactctgtatcctggatgtatgagtcgggtactttgttgtcgtacaaacgtcatccataacaggatgattatgaagtc 32646549  T
Q  405 ggttgatgggtactccatgaatcatg 430  Q
    |||||||||||||   ||||||||||    
T  32646548 ggttgatgggtaccggatgaatcatg 32646523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 55612683 - 55612721
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaat 55612721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 4426808 - 4426772
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaat 4426772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 868597 - 868635
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaat 868635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 9937826 - 9937745
Alignment:
Q  321 tgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||| |||||||||||||||||||  ||||||| | |||| ||  | ||||||| |||| ||||| |||||||||||||||    
T  9937826 tgaaatcactatgtaccctagatgtaagagtcgaatactttatcgtcgttcaaacattgttcgtaaaaggatgactataaag 9937745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 4053062 - 4053137
Alignment:
Q  35 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    |||| ||||||||||| ||||||||| ||||||||||||| ||||||||| || ||| |||||  ||||||||||||    
T  4053062 ttttcattcaataaaaatattcgagacttttctctcaattatggtggatttcgaaaatcctta-cttgataggtttg 4053137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 5616215 - 5616251
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5616215 aaggcatttctttattcattttgttttgtttcaaaat 5616251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18262214 - 18262250
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaat 18262250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 28393339 - 28393303
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||||||||||||||||| |||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaat 28393303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 54239531 - 54239597
Alignment:
Q  42 tcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||||||| |||||  || |||||||| |||||||||||| ||||||||| |||||||||||||    
T  54239531 tcaataaaattat-cgagaacttttctcaattttggtggattccgaaaaccctta-tttgataggtttg 54239597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 33888672 - 33888743
Alignment:
Q  262 ttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatg 333  Q
    ||||| ||||||| |||||||| | ||||| ||| |||||||||| ||||  |||||||||||| |||||||    
T  33888672 ttatgtaaagtgtgataagataatatcatattgacagtggtgtatgccacatttcgacctgaaatcactatg 33888743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 191
Target Start/End: Original strand, 18269070 - 18269100
Alignment:
Q  161 aaggcatttctttattgattttgttttgttt 191  Q
    |||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttt 18269100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 34949182 - 34949098
Alignment:
Q  15 tgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||||| |||||| || ||| ||| ||||||||||| ||||||||| ||||||||||| || |||||||| | |||||||| ||||    
T  34949182 tgtagcctaagagaca-actattttattcaataaaaatattcgagacttttctctcaaatcgggtggatttcagaaaccctaattt 34949098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 56516323 - 56516368
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatag 255  Q
    |||||||||||||||||||||||  ||| ||||||| |||||||||    
T  56516323 gagtaatatttatattggattgactcgctatgagaacactacatag 56516368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 5668327 - 5668295
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||| |||||||||||||||||||||||    
T  5668327 catttctttgttgattttgttttgtttcaaaat 5668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 38223200 - 38223126
Alignment:
Q  34 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||| ||||||||||| |  |||||| ||| |||||||||| |||||||| | ||||||||| |||||||||||||    
T  38223200 tttttcattcaataaaaattatcgagacttt-tctcaattctagtggattctgtaaaccctta-tttgataggtttg 38223126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 6110327 - 6110551
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110327 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 6110426  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110427 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 6110526  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  6110527 gttgatgggtactccatgaatcatg 6110551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 8490758 - 8490982
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490758 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 8490857  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490858 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 8490957  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  8490958 gttgatgggtactccatgaatcatg 8490982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 16482427 - 16482203
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482427 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 16482328  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482327 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 16482228  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  16482227 gttgatgggtactccatgaatcatg 16482203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10579299 - 10579075
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579299 ttaggagtaatatttatattggattgatccgccatgagaatactacataataaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 10579200  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579199 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 10579100  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  10579099 gttgatgggtactccatgaatcatg 10579075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 15357530 - 15357306
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15357530 ttaggagtaatatttatattgggttgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 15357431  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15357430 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 15357331  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  15357330 gttgatgggtactccatgaatcatg 15357306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 15600828 - 15600604
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600828 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 15600729  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600728 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 15600629  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||| ||||||||||||    
T  15600628 gttgatgggtaccccatgaatcatg 15600604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 15607373 - 15607149
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607373 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 15607274  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607273 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 15607174  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||| ||||||||||||    
T  15607173 gttgatgggtaccccatgaatcatg 15607149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10572536 - 10572312
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10572536 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaactgtcataagatattctcatagtgatagtggtgta 10572437  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572436 ttccacccttcgacctgaaaccactatgtaccgtagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 10572337  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  10572336 gttgatgggtactccatgaatcatg 10572312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 15342163 - 15341939
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15342163 ttaggagtaatatttatattggattgatccgtcatgagaatactacatagtaaaaattatgaaaagtgtcataagatattctcatagtgatagtggtgta 15342064  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342063 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 15341964  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  15341963 gttgatgggtactccatgaatcatg 15341939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 17781062 - 17780838
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17781062 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaaattatgaaaagtgtcataagatattctcatagtgatagtggtgta 17780963  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17780962 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaataggatgactataaagttg 17780863  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  17780862 gttgatgggtactccatgaatcatg 17780838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18520238 - 18520462
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520238 ttaggagtaatatttatatttgattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18520337  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18520338 ttccacccttcgaactgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccataacaggatgactataaagttg 18520437  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  18520438 gttgatgggtactccatgaatcatg 18520462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 426
Target Start/End: Original strand, 18522926 - 18523146
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522926 ttaggagtaatatttatattggattgatccgccatgaaaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18523025  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18523026 tttcacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18523125  T
Q  406 gttgatgggtactccatgaat 426  Q
    |||||||||||||||||||||    
T  18523126 gttgatgggtactccatgaat 18523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 32056839 - 32056619
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32056839 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 32056740  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32056739 acccttcaacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 32056640  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||| ||||||||||||||||    
T  32056639 atggatactccatgaatcatg 32056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 13211565 - 13211789
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13211565 ttaggagtaatatttatattggattgatccgccatgagaatattacatagtaaaagttatgaaaagtgtcataatatattctcatagtgatagtggtgta 13211664  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211665 ttccacccttcgacctgaaaccattatgtaacctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 13211764  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  13211765 gttgatgggtactccatgaatcatg 13211789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 13248870 - 13249094
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13248870 ttaggagtaatatttatattggattgattcgccatgagaatattacatagtaaaagttatgaaaagtgtcataatatattctcatagtgatagtggtgta 13248969  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248970 ttccacccttcgacctgaaaccactatgtaacctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 13249069  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  13249070 gttgatgggtactccatgaatcatg 13249094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 206 - 434
Target Start/End: Complemental strand, 17200128 - 17199900
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200128 ttaggagtagtatttgtattggattgacccgctatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 17200029  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||    
T  17200028 ttccacccttcgacctgaaaccactatgtaccttagatgttggagtcgagtgttttgtcaccattcaaatgttgttcgtatcaggatgactataaagttg 17199929  T
Q  406 gttgatgggtactccatgaatcatgatga 434  Q
    |||||||||||||||||||||||||||||    
T  17199928 gttgatgggtactccatgaatcatgatga 17199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 17136616 - 17136840
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  17136616 ttaggagtaatatttatattggattgacccaccatgagaatactacatagtaaaagttattgaaagtgtcataagatattctcatagtgatagtggtgta 17136715  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||    
T  17136716 ttccacccttcgacttgaaaccactatgtaccctagatgttggagtcgagtgcttagtaaacattcaaacgttgtccgtaacaggatgactataaagttg 17136815  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||| ||||||||||||||||    
T  17136816 gttgatggatactccatgaatcatg 17136840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 13517074 - 13517294
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        
T  13517074 ttaggagtaatatttatattggattgatcctccatgagaatactaaatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggcc-- 13517171  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13517172 --ccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttatcaccattcaaacgttgtccgtaacaggatgactataaagttg 13517269  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    || ||||||||||||||||||||||    
T  13517270 gtagatgggtactccatgaatcatg 13517294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 1647465 - 1647241
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||| |||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  1647465 ttaggagtaatgtttatatttgattgactcgccatgagaatactacataataaaagttatgaaaagtgtcatacgatattcccatagtgatagtggtgta 1647366  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1647365 ttccacccttcgacctaaaaccactatataccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaatttg 1647266  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||| |||||||||||||||||    
T  1647265 gttgatgagtactccatgaatcatg 1647241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 16200693 - 16200917
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||| |||||||| |||||||||||| || |||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  16200693 ttaggtgtaatattcatattggattgacccaccatgagaatactacatagtcaaaattatgtaaagtatcataagatattctcatagtgatagtggtgta 16200792  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  16200793 ttcaaccctttgacctgaaaccactatgtaccctagatgttgaagtcgagtgctttgtcaccattcaaatgttgtctgtaacaagatgactataaagttg 16200892  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||| ||||||| ||||||||    
T  16200893 gttgatggatactccacgaatcatg 16200917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 29925234 - 29925458
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29925234 ttaggagtaatatttatattggattgacccacctagagaatactgcatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 29925333  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||| || |||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  29925334 ttccaccatttgacctgaaaccattatgtaccctagacgttggagttgagtgctttgtcaccaatcaaacgttgtctgtaacaagatgattataaagttg 29925433  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||| ||||||| ||||||||    
T  29925434 gttgatggatactccacgaatcatg 29925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 29974387 - 29974611
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29974387 ttaggagtaatatttatattggattgacccacctagagaatactgcatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 29974486  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||| || |||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  29974487 ttccaccatttgacctgaaaccattatgtaccctagacgttggagttgagtgctttgtcaccaatcaaacgttgtctgtaacaagatgattataaagttg 29974586  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||| ||||||| ||||||||    
T  29974587 gttgatggatactccacgaatcatg 29974611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 5128814 - 5128900
Alignment:
Q  24 agaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5128814 agaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 5128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 21034320 - 21034540
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  21034320 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 21034416  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  21034417 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 21034515  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  21034516 gttgatgggtacttgatgaatcatg 21034540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 15846756 - 15846536
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  15846756 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 15846660  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || |||| |||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  15846659 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgttttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 15846561  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  15846560 gttgatgggtacttgatgaatcatg 15846536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 21398874 - 21399094
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||| | | ||||| |  ||||    
T  21398874 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattcttacaatgataataatgta 21398970  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  21398971 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 21399069  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  21399070 gttgatgggtacttgatgaatcatg 21399094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 12299992 - 12300212
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  12299992 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 12300088  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || |||| |||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  12300089 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgatttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 12300187  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  12300188 gttgatgggtacttgatgaatcatg 12300212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 20147774 - 20147554
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  20147774 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 20147678  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  20147677 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 20147579  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  20147578 gttgatgggcacttgatgaatcatg 20147554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 25978948 - 25978728
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||| || || || |||||||||||||||||||  ||||||| |  |||||||||||||||||| | ||||| | |||||    
T  25978948 ttaggagtaatatttatactggatagacccaccgtgagaatactacatagtaa--gttatgagat-tgtcataagatattctcacaatgataatagtgta 25978852  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  |||||||||| ||| || ||| ||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  25978851 tatcgctcttagacctgaaaccactatgatccctagatgt-ggactcaagtactttgttgccattctaacgttgtctgtaaaaggataaccataacgttg 25978753  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  25978752 gttgatgggtacttgatgaatcatg 25978728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 55427103 - 55427323
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  55427103 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 55427199  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  55427200 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 55427298  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  55427299 gttgatgggtacttgatgaatcatg 55427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 14890473 - 14890693
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  14890473 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 14890569  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| ||||||||| |||| ||  | ||||||| |||| || ||||||||||   ||||| ||||||||| |||| ||||| | ||||| ||||    
T  14890570 tattgctcttagacctgaaagcactgtgatctctagatg-tggactcaagtgctttgttgtcattctaacgttgtctgtaaaaggataattataacgttg 14890668  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  14890669 gttgatgggtacttgatgaatcatg 14890693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 53012909 - 53013017
Alignment:
Q  1 ataaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||| ||| ||| ||||||| ||||||||||||||||  ||||| ||| | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53012909 ataagcataactaatgtagcctaagaggcacactttt--attcattaataatattcgagacttttctctcaattctggtggattccggaaacccttattt 53013006  T
Q  100 tgataggtttg 110  Q
    |||||||||||    
T  53013007 tgataggtttg 53013017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 43306869 - 43306770
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||||| ||||||||||||||||  ||||| ||| | ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43306869 acttatgtagcctaagaggcacactttt--attcattaataatattcaagacttttctctcaattctggtggattacggaaacccttattttgataggtt 43306772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3063943 - 3063835
Alignment:
Q  1 ataaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||| ||| ||||||||||| ||||||| ||||||||  ||||| ||| | ||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  3063943 ataagcataacttatgtagcctaagaggtacactttt--attcattaataatattcgagacttttctctcaattctggttgattccgaaaacccttattt 3063846  T
Q  100 tgataggtttg 110  Q
    |||||||||||    
T  3063845 tgataggtttg 3063835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3069081 - 3068973
Alignment:
Q  1 ataaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||| ||| ||||||||||| ||||| ||||||||||  ||||| ||| | ||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  3069081 ataagcataacttatgtagcctaagatgcacactttt--attcattaataatattcgatacttttctctcaattttggtggattccggaaacccttattt 3068984  T
Q  100 tgataggtttg 110  Q
    |||||||||||    
T  3068983 tgataggtttg 3068973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 396
Target Start/End: Original strand, 15526835 - 15527021
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| ||  | ||||| ||||| ||||||   | |||||||| |||||||||||||||| | | || || |||||||    
T  15526835 ttaggagtaatatttatactggattgacccatcgtgagagtactaaatagtat--gctatgaaaa-tgtcataagatattcttacaatgttaatggtgta 15526931  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgact 396  Q
    | |||| ||| |||||||||||||||||  || || ||| |||| || |||||||| | ||||||||||||||||| ||||||| ||||||    
T  15526932 taccactcttagacctgaaaccactatgatccatacatg-tggactcaagtgctttataaccattcaaacgttgtctgtaacagcatgact 15527021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 430
Target Start/End: Original strand, 28088227 - 28088408
Alignment:
Q  245 atactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatg 344  Q
    ||||||||||||||  |||||||||  |||||||||||||||||| | ||||| | ||||||  | | ||| |||||||||||||||||  |||||||||    
T  28088227 atactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataatagtgtatatcgctcttagacctgaaaccactatgatccctagatg 28088323  T
Q  345 ttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
     |||| || || |||||||  |||||| ||||||||| |||| ||||| || |||| |||||||||||| ||||  ||||||||||    
T  28088324 -tggactcaagggctttgttgccattctaacgttgtctgtaaaaggataaccataacgttggttgatggatacttgatgaatcatg 28088408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 41218696 - 41218794
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| ||| |||||| |||||||||  ||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  41218696 acttatggagcctaagagacacactttt--attcaataataatattcgagacttttctctcaattctggtggattccggaaagcctta-tttgataggtt 41218792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 40593605 - 40593541
Alignment:
Q  45 ataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  40593605 ataaaattattcgagattttctctcaattttggtggattccgaaaaccctta-tttgataggtttg 40593541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 25857683 - 25857773
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttatttt 100  Q
    ||||||||||| |||||| |||||||||| ||||||||| | |||| |||| ||||||||||||| ||||||||| ||||||||||||||||    
T  25857683 acttatgtagcctaagagacacacttttt-attcaataataatatttgagacttttctctcaattgtggtggatttcggaaacccttatttt 25857773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 39913426 - 39913348
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccgga 88  Q
    ||||||| ||| ||||||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  39913426 acttatgcagcctaagaggcaca-tttttgattcaataaaaatattcgagacttttctcccaattctggtggattccgga 39913348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 43304155 - 43304058
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||||| ||||||  ||||||||  ||||| ||| | ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  43304155 acttatgtagcctaagag--acactttt--attcattaataatattcgagacttttctctcaattctggtggatttcggaaacccttattttaataggtt 43304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 11787669 - 11787889
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||| || || || |||||||||||||||||||  ||||||| |  | |||||||||||||||| | ||||| |  ||||    
T  11787669 ttaggagtaatatttatactggatagacccaccgtgagaatactacatagtaa--gttatgatattt-tcataagatattctcacaatgataatattgta 11787765  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||| ||||  ||||||||  |  | || ||| ||||||  |||||| ||||||||| ||||  |||| || |||| ||||    
T  11787766 tatcgctcttagacctgaaaccattatgatccctagat-ctataatcaagtactttgttgccattctaacgttgtctgtaaatggataaccataacgttg 11787864  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  11787865 gttgatgggtacttaatgaatcatg 11787889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 14147103 - 14147226
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||| |||||||||| |||||||| | ||| ||||||| ||||||||||   |||||||||| |||| ||||||||||||| | |||||  ||||||    
T  14147103 ttaggaggaatatttatactggattgacctgccgtgagaatgctacatagtat--gttatgaaaa-tgtcgtaagatattctcacattgataaaggtgta 14147199  T
Q  306 ttccacccttcgacctgaaaccactat 332  Q
    |  ||| ||| ||||||||||||||||    
T  14147200 tatcactcttagacctgaaaccactat 14147226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 15317393 - 15317176
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | ||| || || || ||||||||||||||||||   ||||||| |  |||||||||||||||||| | ||||| | |||||    
T  15317393 ttaggagtaatatttatactagatagacccaccgtgagaatactacatagtac--gttatgagat-tgtcataagatattctcacaatgataatagtgta 15317297  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
       | | ||| |||||||||||||||||  ||||||||| |||| || ||| ||||||   ||||| ||||||||| ||||  |||| |  |||| ||||    
T  15317296 aatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtactttgt---cattctaacgttgtctgtaaacggataatcataacgttg 15317201  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||| |||||||  ||||||||||    
T  15317200 gttgacgggtacttgatgaatcatg 15317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 412
Target Start/End: Complemental strand, 24253328 - 24253130
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||| ||||||||||||| |||| || ||||||||||| | |||||  || |||||  || |  ||||||| ||||||||||||||||  ||||||||||    
T  24253328 gagttatatttatattggtttgaccctccatgagaataatgcatag--aatgttatttaagga-tcataagttattctcatagtgataacggtgtattcc 24253232  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    ||  |||||||| ||||||||||||||| |||||||  || |||||| ||||||   | ||||||| |||||  | ||||  |||| |||||||| ||||    
T  24253231 aca-ttcgacctaaaaccactatgtaccttagatgtatgactcgagtactttgttgtcgttcaaacattgtcaattacagagtgaccataaagttagttg 24253133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 45168478 - 45168410
Alignment:
Q  22 taagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 89  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  45168478 taagaggcatatttttttattcaataaaattattcgagattttctctcaatttcttgtggattctggaa 45168410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 392
Target Start/End: Original strand, 30464147 - 30464261
Alignment:
Q  277 taagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacg 376  Q
    ||||||||||||||| ||||| |||| ||| |||| ||| |||||||||||||||||  ||||||||| |||| || |||| ||| |   ||||||||||    
T  30464147 taagatattctcataatgataatggtctataccactcttagacctgaaaccactatgatccctagatg-tggactcaagtgttttattgacattcaaacg 30464245  T
Q  377 ttgtccgtaacaggat 392  Q
    ||||| |||| |||||    
T  30464246 ttgtctgtaaaaggat 30464261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 6110064 - 6110102
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaat 6110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 8490488 - 8490526
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaat 8490526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 10572799 - 10572761
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaat 10572761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 13248607 - 13248645
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaat 13248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 18640953 - 18640915
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaat 18640915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 356
Target Start/End: Original strand, 32280388 - 32280507
Alignment:
Q  239 atgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccac----tatgt 334  Q
    ||||||||| |||||||| |  || ||| |||||||||||||||||||||||||||||| || | ||||  ||| ||  || |||||||||    |||||    
T  32280388 atgagaataatacatagtga--gtcatgtaaagtgtcataagatattctcatagtgataatgatttattttaccttttcacttgaaaccactatatatgt 32280485  T
Q  335 accctagatgttggagtcgagt 356  Q
    ||||||||||| ||||||||||    
T  32280486 accctagatgtaggagtcgagt 32280507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 33620181 - 33620106
Alignment:
Q  33 ctttttgattcaataaaattattcgagatttt-ctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||    
T  33620181 ctttttaattcaataaaaatat-cgagatttttctctcaattctggaggattctggaaaccctta-tttgataggttt 33620106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 4580479 - 4580553
Alignment:
Q  35 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    |||| |||||||||||| |||||||| ||||||||||||||| |||||||| | ||||||||| |||||||||||||    
T  4580479 ttttcattcaataaaat-attcgagaattttctctcaattctagtggattctgaaaaccctta-tttgataggtttg 4580553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 13516813 - 13516849
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaat 13516849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 16482688 - 16482652
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaat 16482652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 17200389 - 17200353
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaat 17200353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18510924 - 18510960
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaat 18510960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18519980 - 18520016
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaat 18520016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18522665 - 18522701
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaat 18522701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18534758 - 18534794
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaat 18534794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 13211305 - 13211340
Alignment:
Q  162 aggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaat 13211340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 15357793 - 15357755
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaat 15357755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 15601091 - 15601053
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaat 15601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 15607636 - 15607598
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaat 15607598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 20398574 - 20398508
Alignment:
Q  34 tttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||| ||| || |||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  20398574 ttttttatttaagaaaaatattcgagacttttttctcaattctggtggattccgaaaacccttattt 20398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 29924971 - 29925009
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaat 29925009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 29974124 - 29974162
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaat 29974162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 19795168 - 19795217
Alignment:
Q  34 tttttgattcaataaaattattcgagattttctctcaattctggtggatt 83  Q
    ||||| ||||||||||||||||| ||||||||||| |||| |||||||||    
T  19795168 ttttttattcaataaaattattccagattttctctaaattttggtggatt 19795217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 1647726 - 1647694
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaat 1647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 10579556 - 10579524
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaat 10579524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 17781319 - 17781287
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaat 17781287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 19089946 - 19089914
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  19089946 catttctttattgattttgttttgtttcaaaat 19089914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 32057101 - 32057069
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  32057101 catttctttattgattttgttttgtttcaaaat 32057069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 36138097 - 36138033
Alignment:
Q  269 aagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatg 333  Q
    ||||| |||||||||||  || ||||||| |||||||| ||||||||| |||||||| |||||||    
T  36138097 aagtgccataagatatttccaaagtgataatggtgtataccacccttcaacctgaaatcactatg 36138033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 19949914 - 19949983
Alignment:
Q  31 cactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||||| | ||| ||||||| |||| |||| |||||||||||||||| ||||||||  ||||||||||||    
T  19949914 cactttatcattgaataaaaatattagagacttttctctcaattctgatggattccaaaaacccttattt 19949983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 25340256 - 25340181
Alignment:
Q  34 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||| |||||||||||||  |||| |  || |||||||| || |||||||| |||||||||| |||||||||||||    
T  25340256 ttttttattcaataaaatttatcgacaacttttctcaattatgatggattccagaaaccctta-tttgataggtttg 25340181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 36142816 - 36142880
Alignment:
Q  269 aagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatg 333  Q
    ||||| |||||||||||  || ||||||| || |||||  |||||||| ||||||||||||||||    
T  36142816 aagtgccataagatatttccaaagtgataatgatgtatgtcacccttcaacctgaaaccactatg 36142880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18252293 - 18252517
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252293 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18252392  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252393 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18252492  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  18252493 gttgatgggtactccatgaatcatg 18252517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 18532458 - 18532234
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532458 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18532359  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532358 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18532259  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  18532258 gttgatgggtactccatgaatcatg 18532234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27131353 - 27131130
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131353 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 27131254  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131253 ttccacccttcgacctgaaaccactatgta-cctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 27131155  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  27131154 gttgatgggtactccatgaatcatg 27131130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27310521 - 27310297
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27310521 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattcttatagtgatagtggtgta 27310422  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27310421 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtctgtaacaggatgactataaagttg 27310322  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  27310321 gttgatgggtactccatgaatcatg 27310297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 16358975 - 16358755
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16358975 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgagaagtgtcataagatattctcatagtgatagtggtgtattcc 16358876  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16358875 acccttcgtcttgaaaccaccatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactttaaagttggttg 16358776  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||    
T  16358775 atgggtactccatgaatcatg 16358755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 3855863 - 3855639
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  3855863 ttaggagtaatatttatattggattgacccgcaatgagaatactacatagtaaaggttatgaaaagtgtcataagatattctcacagtgatagtggtgta 3855764  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3855763 ttccaccattcgacccgaaaccactatgtaccctagatgttggagttgagcgctttgtcaccattcaagcgttgtccgtaacaggatgactataaagttg 3855664  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||  ||||||||||||||||||    
T  3855663 gttgaccggtactccatgaatcatg 3855639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 22641817 - 22641594
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||| ||||||||||| | |||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  22641817 ttaggaataatatttatactagattgacccaccatgagaa-actacatagtaaaagttataaaaagtgtcataagatattctcacagtgatagtggtgta 22641719  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  22641718 ttccacccttcgacctgaaaccactatgtaccgtagatgttggagtcgagtgctttgtcaccattcaaacgttgtctgtaacaagatgactataaagttg 22641619  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    || ||||||||||||| ||||||||    
T  22641618 gtcgatgggtactccacgaatcatg 22641594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 36816577 - 36816354
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||||    
T  36816577 ttaggagtaatatttatattggattgacccaccatgagaatactacatagtaaaagttatgaaaagtgtcataaaa-attatcatagtgatggtggtgta 36816479  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  36816478 ttccaccctttgaactgaaaccactatgtaccctagatgttggagtcgagcgttttgtcaccattcaaacgttgtctgtaacaagataactataaagttg 36816379  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||| |||||||||  |||||||    
T  36816378 gttgataggtactccacaaatcatg 36816354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27277501 - 27277278
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | |||||| || |||| |||||| | |||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||    
T  27277501 ttaggagtaatatttatactagattgacccaccataagaatattgcatagtaaaagtcatgaaa-gtgccataagatattcttatagtgatagtggtgta 27277403  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||  |||||| |||||| |||||||||    
T  27277402 ttccaccctttgacctgaaaccactatgtaccctggatgttggagtcgagtgctttatcataattcaaacattgtttgtaacaagatgaccataaagttg 27277303  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||| ||||||||||| |||||||    
T  27277302 gttgaagggtactccataaatcatg 27277278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 238 - 430
Target Start/End: Complemental strand, 9916688 - 9916497
Alignment:
Q  238 catgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtattccacccttcgacctgaaa-ccactatgta 335  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9916688 catgagaatactacatag--aaagttatgtaaa-tgtcataaattattctcatagtgataagtggtgtattccacccttcgacctgaaaaccactatgta 9916592  T
Q  336 ccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    |||||||||| |||||||||| |||||| ||| | |||||||||||||||||| | ||||||||||||| ||| ||| || ||||| ||||||||    
T  9916591 ccctagatgtaggagtcgagtactttgttaccgtccaaacgttgtccgtaacaaggtgactataaagttagtttatgagttctccacgaatcatg 9916497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 21171177 - 21171081
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21171177 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggt 21171081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 50857642 - 50857542
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50857642 acttatgcagcctaagaggcacactttttgatacaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 50857543  T
Q  110 g 110  Q
    |    
T  50857542 g 50857542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 19706659 - 19706439
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  19706659 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 19706563  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  19706562 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 19706464  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  19706463 gttgatgggtacttgatgaatcatg 19706439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 28134943 - 28134723
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  28134943 ttaggagtaatatttatattggattgatccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 28134847  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||| ||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  28134846 tatcgctcttagacctgaaaccactatgatccctaaatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 28134748  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  28134747 gttgatgggtacttgatgaatcatg 28134723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 43802585 - 43802365
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  43802585 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 43802489  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  43802488 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 43802390  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  43802389 gttgatgggtacttgatgaatcatg 43802365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 20391459 - 20391239
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  | |||||||||||||||| | ||||| |  ||||    
T  20391459 ttaggagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaattt-tcataagatattctcacaatgataataatgta 20391363  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | || | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  20391362 taccgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 20391264  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  20391263 gttgatgggtacttgatgaatcatg 20391239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 9456198 - 9456418
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  9456198 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 9456294  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  9456295 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 9456393  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  9456394 gttgatgggcacttgatgaatcatg 9456418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 20779865 - 20779645
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  20779865 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 20779769  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  20779768 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 20779670  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  20779669 gttgatgggcacttgatgaatcatg 20779645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 22670477 - 22670257
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  22670477 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 22670381  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  22670380 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 22670282  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  22670281 gttgatgggcacttgatgaatcatg 22670257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 42817209 - 42816989
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  42817209 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 42817113  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  42817112 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 42817014  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  42817013 gttgatgggcacttgatgaatcatg 42816989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 410
Target Start/End: Original strand, 634016 - 634216
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||| | || || |||||||||||||||||  |||||||| | | |||||||||||||||||| | ||||| | |||||    
T  634016 ttaggagtaatatttatactggattaacccaccgtgagaatactacatagt--aagttatg-agattgtcataagatattctcacaatgataatagtgta 634112  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  634113 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataaccataacgttg 634211  T
Q  406 gttga 410  Q
    |||||    
T  634212 gttga 634216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 430
Target Start/End: Original strand, 22612577 - 22612794
Alignment:
Q  209 ggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattc 308  Q
    |||||||||||| ||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  |||||      
T  22612577 ggagtaatatttttattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgtatat 22612673  T
Q  309 cacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggtt 408  Q
    | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| |||||||||  ||| ||||| |  |||| |||||||    
T  22612674 cgctcttagacctgaaaccactatgatcactagatg-tggactcaagtgctttgttgccattctaacgttgtctataaaaggataatcataacgttggtt 22612772  T
Q  409 gatgggtactccatgaatcatg 430  Q
    ||||| ||||  ||||||||||    
T  22612773 gatggctacttgatgaatcatg 22612794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 8727749 - 8727969
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| ||||||||||||| ||||||||||| || |||||||||||||||||  | |||||||||| |  |||||||||||||| ||||||||   |||||    
T  8727749 ttagaagtaatatttatactggattgatccaccgtgagaatactacatagt--atgttatgaaaa-taccataagatattctcttagtgataagagtgta 8727845  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| |||||| ||||||||||  |||||||||  ||| || ||||||||||  |||||| ||||||||| |||| ||||| || ||||  |||    
T  8727846 tatcactcttagacctggaaccactatgatccctagatg-cggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataaccataacattg 8727944  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    | | |||||||||  ||||||||||    
T  8727945 gctaatgggtacttgatgaatcatg 8727969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 207 - 430
Target Start/End: Original strand, 23507164 - 23507385
Alignment:
Q  207 taggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgta 305  Q
    |||||||||||||||||||||||| | || |||| ||||| ||||| ||  || ||| || |||  | |||||| |||||||||||||||| |||| |||    
T  23507164 taggagtaatatttatattggattaacccaccattagaatgctacagag--aacgttgtgtaaaaag-cataagttattctcatagtgataagtggagta 23507260  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  || ||||||||||||||||||| ||||||||||||||  || | |||| |||||| | ||| ||||    ||| |||| |||||||||||||| | |    
T  23507261 tgtcatccttcgacctgaaaccactgtgtaccctagatgtaagatttgagtactttgttatcatacaaataccgtctgtaataggatgactataaattcg 23507360  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
     || ||||||||||||| |||||||    
T  23507361 atttatgggtactccataaatcatg 23507385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 12486392 - 12486334
Alignment:
Q  41 ttcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  12486392 ttcaataaaattattcgagattttctctcaattttggtggattccgaaaacccttattt 12486334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 13444185 - 13444086
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||||| ||||||||||| ||||  ||||| ||| | |||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||    
T  13444185 acttatgtagcctaagaggcacattttt--attcagtaataatattagagacttttctctcaattctggtggattacggaaacccttattttgatatgtt 13444088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 414
Target Start/End: Original strand, 29096804 - 29097008
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||| ||||||||||| | ||||||||| || || ||||||||||||| |   |||||||||| |||||||||||||||||||| ||||| ||||||     
T  29096804 ttaggaataatatttatactagattgatccaccgtgtgaatactacatagcat--gttatgaaaa-tgtcataagatattctcataatgataatggtgtt 29096900  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| ||| |||||||||||||  ||||||||  |||| || |||| ||| |  | ||||||||||| || |||| ||||| || |||| ||||    
T  29096901 tcacactcttagacatgaaaccactatgatccctagat-atggactcaagtgttttatttcgattcaaacgttatctgtaataggataaccataacgttg 29096999  T
Q  406 gttgatggg 414  Q
    ||| |||||    
T  29097000 gttaatggg 29097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 430
Target Start/End: Complemental strand, 47667654 - 47667485
Alignment:
Q  259 aagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgc 358  Q
    |||||||||||  |||||||||||||||||| | ||||| |  |||||  | | ||| |||||||||||||||||  | |||||||| ||| || |||||    
T  47667654 aagttatgaaat-tgtcataagatattctcacaatgataataatgtatatcgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgc 47667557  T
Q  359 tttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    |||||  |||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||  ||||||||||    
T  47667556 tttgttgccattctaacgttgtctgtaaaaggataatcataacgttggttgatgggtacttgatgaatcatg 47667485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 13441796 - 13441698
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    |||||| |||| ||||||||||||||||  ||||| ||| | |||| |||| |||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  13441796 acttatatagcctaagaggcacactttt--attcattaataatattagagacttttctctcaattctgatggattccggaaatccttattttaataggtt 13441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 430
Target Start/End: Complemental strand, 28145835 - 28145723
Alignment:
Q  317 gacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggta 416  Q
    |||||||||||||||||  |||||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| |||||||||||||||    
T  28145835 gacctgaaaccactatgatccctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttggttgatgggta 28145737  T
Q  417 ctccatgaatcatg 430  Q
    ||  ||||||||||    
T  28145736 cttgatgaatcatg 28145723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 42071489 - 42071420
Alignment:
Q  40 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| ||||| |||| |||||||||||||    
T  42071489 attcaataaaattattcgagattctctctcaattatgatggattccagaaacgctta-tttgataggtttg 42071420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 21881596 - 21881475
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||| ||||||   |||||| || || ||||||||||||||||||   |||||||||| |||||||||||||||||| | |||||  ||||||    
T  21881596 ttaggagtaatgtttatacaagattgacccaccgtgagaatactacatagtat--gttatgaaaa-tgtcataagatattctcacaatgataacggtgta 21881500  T
Q  306 ttccacccttcgacctgaaaccact 330  Q
    | |||| ||| |||||||| |||||    
T  21881499 taccactcttagacctgaagccact 21881475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 40804557 - 40804650
Alignment:
Q  15 tgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||| ||||||||| ||||||| ||||||||| || |||||||| |||||||||||||||||||||||  |||||||| || |||||||||||||    
T  40804557 tgtagcctaagaggca-actttttcattcaataatat-attcgagacttttctctcaattctggtggattttggaaacccgta-tttgataggtttg 40804650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 8931153 - 8931211
Alignment:
Q  52 tattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  8931153 tattcgagattttctctcaatttctggtggattccgg-aacccttatattgataggtttg 8931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 18252030 - 18252068
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaat 18252068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 18532721 - 18532683
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaat 18532683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 27131616 - 27131578
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaat 27131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 352
Target Start/End: Complemental strand, 12014224 - 12014084
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtattc 308  Q
    |||||||||| |||||||||||| ||| |||||||||  ||||||| | ||  | | ||||   ||| |||  ||||||||||||||| ||||||||||     
T  12014224 gagtaatattaatattggattgacccggcatgagaatgttacatagaacaatatgtaaaaa---tcacaagtcattctcatagtgataagtggtgtattt 12014128  T
Q  309 cacccttcgacctgaaaccactatgtaccctagatgttggagtc 352  Q
    |||||||| |||| ||| |||| ||||| |||||||| ||||||    
T  12014127 cacccttcaacctaaaatcactgtgtactctagatgtaggagtc 12014084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 22657161 - 22657108
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagtt 263  Q
    |||||||||||||||| |||||| || ||||| |||||||||||||||||||||    
T  22657161 gagtaatatttatattagattgacccaccatgtgaatactacatagtaaaagtt 22657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 16359240 - 16359204
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaat 16359204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 21171438 - 21171402
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaat 21171402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 27310782 - 27310746
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaat 27310746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 51997361 - 51997485
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||| |||||| || ||||||||||||||| ||  |||  ||||| || || ||||||| |||||||||| ||||| || | ||    
T  51997361 ttaggagtaatatttatattagattgacccaccatgagaatactacgta--aaatattatg-aatgtatcataagttattctcatattgataatgatata 51997457  T
Q  306 ttccacccttcgacctgaaaccactatg 333  Q
    | |||| ||| |||| ||||| ||||||    
T  51997458 taccacgcttagaccagaaactactatg 51997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 24301774 - 24301691
Alignment:
Q  260 agttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagat 343  Q
    |||||||  |||| |||||||| |||||||||||||||||||||||| | |||||| ||||| ||| || ||||  ||||||||    
T  24301774 agttatgttaagtatcataagacattctcatagtgatagtggtgtatacaaccctttgacctaaaatcattatgatccctagat 24301691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 12006413 - 12006332
Alignment:
Q  283 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgt 363  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||| || | ||||| |||||||| | |||| ||| ||||||    
T  12006413 attctcatactgataagtggtgttttccacccttcgacctgaaatcattgtgtactctagatgtagaagtcaagtactttgt 12006332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 35930664 - 35930713
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatag 255  Q
    ||||||||||||||||||||||||||| |  || ||||||||||||||||    
T  35930664 ttaggagtaatatttatattggattgacctaccgtgagaatactacatag 35930713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 36816834 - 36816802
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  36816834 catttctttattgattttgttttgtttcaaaat 36816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 10852461 - 10852402
Alignment:
Q  269 aagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaacca 328  Q
    ||||||||||||||||| | | ||||||| ||||||||  |||||||| |||||||||||    
T  10852461 aagtgtcataagatatttttaaagtgataatggtgtatgtcacccttcaacctgaaacca 10852402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 26923604 - 26923553
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagta 257  Q
    |||||||||||||||||| || ||||| || || ||||||||||||||||||    
T  26923604 ttaggagtaatatttatactgaattgacccaccgtgagaatactacatagta 26923553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 3856126 - 3856088
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaat 3856088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 31236478 - 31236402
Alignment:
Q  212 gtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcata 291  Q
    |||||| ||||| || |||||||   |||||||||||||||||||| |  ||||| |||||||| |||||||||||||||    
T  31236478 gtaatacttatactgaattgatctatcatgagaatactacatagtata--ttatg-aaagtgtcgtaagatattctcata 31236402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 206 - 429
Target Start/End: Original strand, 21940928 - 21941151
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940928 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 21941027  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21941028 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 21941127  T
Q  406 gttgatgggtactccatgaatcat 429  Q
    ||||||||||||||||||||||||    
T  21941128 gttgatgggtactccatgaatcat 21941151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 15326461 - 15326685
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15326461 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 15326560  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15326561 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaatgttgtccgtaacaggatgactataaagttg 15326660  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  15326661 gttgatgggtactccatgaatcatg 15326685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 15506830 - 15507054
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15506830 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 15506929  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15506930 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaatgttgtccgtaacaggatgactataaagttg 15507029  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  15507030 gttgatgggtactccatgaatcatg 15507054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 210 - 430
Target Start/End: Original strand, 22171754 - 22171974
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22171754 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 22171853  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22171854 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 22171953  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||    
T  22171954 atgggtactccatgaatcatg 22171974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 6094386 - 6094610
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094386 ttaggagtaatatttatattggattgatccgccatgagaatactatatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 6094485  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6094486 ttccacccttcgaccagaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgttcgtaacaagatgactataaagttg 6094585  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  6094586 gttgatgggtactccatgaatcatg 6094610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 24642912 - 24643135
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  24642912 ttaggagtaatatttatattggattgatcctccatgagaatactacatagtaaaa-ttatgaaaagtgtcataagatattctcatagtgataatggtgta 24643010  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  24643011 ttccacccttcgaactgaaaccactatgtaccctagatgttggagtcaagtgttttgtcaccattcaaacgtggtctgtaacaggatgactataaagttg 24643110  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  24643111 gttgatgggtactccatgaatcatg 24643135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 289 - 430
Target Start/End: Original strand, 28548393 - 28548534
Alignment:
Q  289 atagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaaca 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28548393 atagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaaca 28548492  T
Q  389 ggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  28548493 gggtgactataaagttggttgatgggtactccatgaatcatg 28548534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 42891862 - 42891762
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42891862 acttatgtagcctaagaggcacactttttgattcaataaaattatttgagattttctctcaattctggtggattccggaaacccttattttgataggttt 42891763  T
Q  110 g 110  Q
    |    
T  42891762 g 42891762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 24797328 - 24797224
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24797328 gagtaaaatttatactggattgacccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgat-gtggtgtattcc 24797230  T
Q  310 accctt 315  Q
    ||||||    
T  24797229 accctt 24797224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 22922048 - 22921948
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||| ||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22922048 acttatgcagcctaagagacacaccttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 22921949  T
Q  110 g 110  Q
    |    
T  22921948 g 22921948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 8371469 - 8371253
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  |||||  |    
T  8371469 gagtaatatttatattggattgacccaccgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgtatatc 8371373  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
     | ||| |||||||||||||||||  |||||||||| ||| || ||||||||||  |||||| ||||||||| |||| |||||||  |||| ||||||||    
T  8371372 gctcttagacctgaaaccactatgatccctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggatgatcataacgttggttg 8371274  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||||||||  ||||||||||    
T  8371273 atgggtacttgatgaatcatg 8371253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 363
Target Start/End: Complemental strand, 14983864 - 14983710
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||||||||||||| ||||| || ||| ||||||||||||||||||||||  ||||||||| ||| ||||||||| |||||||||||||||| |||||||    
T  14983864 ttaggagtaatatt-atattagaatgacccgccatgagaatactacatag--aaagttatgtaaa-tgtcataagttattctcatagtgataagtggtgt 14983769  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgt 363  Q
    |||||  |||||||||||||| |||||||||||||||||||  ||||||||| ||||||    
T  14983768 attccgtccttcgacctgaaatcactatgtaccctagatgtaagagtcgagtactttgt 14983710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 18180877 - 18180781
Alignment:
Q  12 ttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18180877 ttatgtagcctaagaggcac--tttttgattcaataaaattattcgagattttctctcaattctggtggattctggaaacccttattttgataggtttg 18180781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 12562205 - 12562425
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  12562205 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 12562301  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||   ||||| ||||||||| |||| ||||| |  |||| ||||    
T  12562302 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgtcattctaacgttgtctgtaaaaggataatcataacgttg 12562400  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  12562401 gttgatgggtacttgatgaatcatg 12562425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 21969415 - 21969635
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  21969415 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 21969511  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  21969512 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 21969610  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  21969611 gttgatgggtacttgatgaatcatg 21969635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 22659714 - 22659494
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||| |||| |||||||| || || |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| | |||||    
T  22659714 ttaggagtaatatgtatactggattgacccaccgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataatagtgta 22659618  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  |||||||||| ||| || ||||||||||  |||||| ||| ||||| |||| ||||| || |||| ||||    
T  22659617 tatcgctcttagacctgaaaccactatgatccctagatgt-ggactcaagtgctttgttgccattctaacattgtctgtaaaaggataaccataacgttg 22659519  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  22659518 gttgatgggtacttgatgaatcatg 22659494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 22512245 - 22512144
Alignment:
Q  10 acttatgtagcttaagaggcacactttttg-attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22512245 acttatgtaacctaagagtcacactttttttattcaataaaattattcgagattttctctcaattctggtggatttcggaaacccttattttgataggtt 22512146  T
Q  109 tg 110  Q
    ||    
T  22512145 tg 22512144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 25611277 - 25611497
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  25611277 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaactgtcataagatattctcacaatgataataatgta 25611373  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||  ||||    
T  25611374 tatcactcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcatagtgttg 25611472  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  25611473 gttgatgggcacttgatgaatcatg 25611497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27007737 - 27007517
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  27007737 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 27007641  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  27007640 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 27007542  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  27007541 gttgatgggcacttgatgaatcatg 27007517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27014880 - 27014660
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  27014880 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 27014784  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  27014783 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 27014685  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  27014684 gttgatgggcacttgatgaatcatg 27014660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 27880707 - 27880487
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  27880707 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 27880611  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  27880610 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 27880512  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  27880511 gttgatgggcacttgatgaatcatg 27880487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 28020888 - 28020668
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  28020888 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 28020792  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  28020791 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 28020693  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  28020692 gttgatgggcacttgatgaatcatg 28020668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 42890289 - 42890383
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  42890289 acttatgtagcctaagaggcacactttttgattcaataaaattattcgagattttctct------tggtggattccggaaacccttattttgataggttt 42890382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 22520967 - 22520897
Alignment:
Q  40 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22520967 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 22520897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 22130829 - 22130609
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  22130829 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 22130733  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| |||||||||  ||| ||||| || |||| ||||    
T  22130732 tatcgctcttggacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctataaaaggataacaataacgttg 22130634  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  22130633 gttgatgggcacttgatgaatcatg 22130609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 21916758 - 21916978
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||| ||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  21916758 ttaggagtaatatttatattggattgacccactgtgagaatactacattgt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 21916854  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || ||||  |||    
T  21916855 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataactttg 21916953  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  21916954 gttgatgggcacttgatgaatcatg 21916978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 26240566 - 26240786
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||  |  ||||    
T  26240566 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgattataatgta 26240662  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| ||||| |||||||||||  ||||||||| |||| || ||||||||||   ||||| ||||||||  |||| ||||| |  |||| ||||    
T  26240663 tatcgctcttagacctaaaaccactatgatccctagatg-tggactcaagtgctttgttgtcattctaacgttgtttgtaaaaggataatcataacgttg 26240761  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  26240762 gttgatgggtacttgatgaatcatg 26240786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 45534493 - 45534273
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  45534493 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 45534397  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| |||||||||  ||| ||||| || |||| ||||    
T  45534396 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctataaaaggataacaataacgttg 45534298  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  45534297 gttgatgggtacttgatgaatcatg 45534273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 22926816 - 22926746
Alignment:
Q  40 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22926816 attcaataaaaatattcgagattttctctcaattctggtggattccagaaacccttattttgataggtttg 22926746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 6430968 - 6431188
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | ||| || || || |||||||||||||||||||  ||||||| |  |||||||||||||||||| | ||||| | |||||    
T  6430968 ttaggagtaatatttatactagatagacccaccgtgagaatactacatagtaa--gttatgagat-tgtcataagatattctcacaatgataatagtgta 6431064  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||  ||||||||| |||||||  |||||||||| ||| || ||| ||||||   ||||| ||||||||| |||| ||||| || |||| ||||    
T  6431065 tatcgctctaagacctgaaatcactatgatccctagatgt-ggactcaagtactttgttgtcattctaacgttgtctgtaaaaggataaccataacgttg 6431163  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  6431164 gttgatgggtacttgatgaatcatg 6431188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 345
Target Start/End: Complemental strand, 8782095 - 8781959
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||| ||||||||||| | ||||||||| || |||||||||||||||||    |||||||||| |||||||||||||||||| | ||||| |||||||    
T  8782095 ttaggactaatatttatacttgattgatccaccgtgagaatactacatagtct--gttatgaaaa-tgtcataagatattctcacaatgataatggtgta 8781999  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    | |||| ||| ||| |||||||||||||  ||||||||||    
T  8781998 taccactcttagacttgaaaccactatgatccctagatgt 8781959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 414
Target Start/End: Complemental strand, 38232315 - 38232115
Alignment:
Q  212 gtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgat-agtggtgtattcca 310  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||| ||| ||||| | | ||||| |||| |||| ||||||||||||||    
T  38232315 gtaatatttatattggattgatccgccgtgagaatgctacatag--aaagttatgtaaa-tgtcacaggttattcgcataatgataagtggtgtattcca 38232219  T
Q  311 cccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttga 410  Q
     |||  ||| |||||    | |||||||| ||||| | |||||||| ||||||   | | |||||||||||||| ||| ||||  |||||||||||||||    
T  38232218 tcctcagacttgaaattgatgtgtacccttgatgtagaagtcgagtactttgttgtcgtacaaacgttgtccgtgacatgatggttataaagttggttga 38232119  T
Q  411 tggg 414  Q
    ||||    
T  38232118 tggg 38232115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 23573475 - 23573574
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||||| ||||||||||||||||  ||||| ||| | ||||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  23573475 acttatgtagcctaagaggcacactttt--attcattaataatattcgagacttttctctcaatttaggtggatttcggaaacccttattttgataggtt 23573572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 6845229 - 6845327
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||||| | ||||||  ||||||||||||||| ||| | |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  6845229 acttatgtatcctaagag--acactttttgattcattaataatattcgagattttctctcaatttttggtggattcc-gaaacccttattttgataggtt 6845325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 420
Target Start/End: Complemental strand, 24796826 - 24796731
Alignment:
Q  323 aaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactcc 420  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||  || |||| |  ||| ||||||| ||||||||||||||||||    
T  24796826 aaaccactatataccctagatgttggagtcgagtgctttatcaccattcaatcgt--tctgtaatataatggctataaaattggttgatgggtactcc 24796731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 26150582 - 26150669
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttatt 98  Q
    ||||||| ||||||||||||||  ||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  26150582 acttatgcagcttaagaggcac--tttttcattcaataaaaatattcgagacttttctctcaattctggtggattctggaaatccttatt 26150669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 18835432 - 18835556
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || || |||||||||||||||||  | ||| | |||| ||||||||||||||| || ||||||| |||||||    
T  18835432 ttaggagtaatatttatactggattgacccaccgtgagaatactacatagt--atgtt-ttaaaaatgtcataagatattcacacagtgataatggtgta 18835528  T
Q  306 ttccacccttcgacctgaaaccactatg 333  Q
    |  ||| ||| |||||||||||| ||||    
T  18835529 tatcactcttagacctgaaaccattatg 18835556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 227 - 414
Target Start/End: Complemental strand, 20535409 - 20535226
Alignment:
Q  227 gattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaac 326  Q
    |||||| || ||||||||||| | |||||||   ||||||||| ||||||||||||||||||| | ||||| |||||||| |||| ||| |||||| |||    
T  20535409 gattgacccaccatgagaatattgcatagtat--gttatgaaa-gtgtcataagatattctcacaatgataatggtgtataccactcttagacctggaac 20535313  T
Q  327 cactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatggg 414  Q
    |||||||  || || ||  |||| || |||||||| |  ||||||||||||||||  ||||||||| || |||| ||||||| |||||    
T  20535312 cactatgatccttaaat-atggactcaagtgctttattgccattcaaacgttgtctataacaggataaccataatgttggttaatggg 20535226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 23570488 - 23570575
Alignment:
Q  22 taagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||||||||||  |||||  || | ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  23570488 taagaggcacactttt--attcataaataatattcgagacttttctctcaattctggtgcattctggaaacccttattttgataggtttg 23570575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 2963156 - 2962932
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||| ||||| || |  ||  ||||||||||||||||| |  |||||| |   | |||||||||||||||||| | ||||| | |     
T  2963156 ttaggagtaatatttatactggatagacctaccgcgagaatactacatagtaca--ttatgagattaattgtcataagatattctcacaatgataatagc 2963059  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    ||||  | | ||| |||||||||||||||||  ||||||| || ||| || ||| ||||||  |||||| ||||||||| | || ||||| || |||| |    
T  2963058 gtatatccctcttagacctgaaaccactatgatccctagacgt-ggactcaagtactttgtttccattctaacgttgtctgcaaaaggataaccataacg 2962960  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||| ||||  ||||||||||    
T  2962959 ttggttgatggttacttgatgaatcatg 2962932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 37189761 - 37189857
Alignment:
Q  13 tatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||  |||||| ||||||||| ||||| ||| | ||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||    
T  37189761 tatgtagcccaagaggtacacttttttattcattaataatattcgagatttt-tctcaatttctggtggatttcgg-aacccttattttgataggtttg 37189857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 36970439 - 36970556
Alignment:
Q  317 gacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggta 416  Q
    |||||||||||||||||  |||||||||| ||| || ||||||||||  |||||| |||||| |  |||| ||| | || |||| |||||||||||||||    
T  36970439 gacctgaaaccactatgatccctagatgt-ggactcaagtgctttgttgccattctaacgttatatgtaaaagggtaacaataacgttggttgatgggta 36970537  T
Q  417 ctccatgaatcatgatgat 435  Q
    ||  |||||||||| ||||    
T  36970538 cttgatgaatcatgctgat 36970556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 2375411 - 2375528
Alignment:
Q  317 gacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggta 416  Q
    |||||||||| | ||| |||| ||||||| |||||||||| ||||||  | || ||||| |  |||| ||  |||| |||||||||| |||||||||||     
T  2375411 gacctgaaactattatttaccatagatgtaggagtcgagtactttgttgctatacaaacatcatccgcaattggataactataaagtcggttgatgggtg 2375510  T
Q  417 ctccatgaatcatgatga 434  Q
    |||||||||| |||||||    
T  2375511 ctccatgaattatgatga 2375528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 21940665 - 21940703
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaat 21940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 403
Target Start/End: Original strand, 29645675 - 29645797
Alignment:
Q  281 atattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgt 380  Q
    |||||||||||||||||||| |||| | |||| |||||||||||||  ||| ||| ||||||| | ||| || | | ||||||   | |||||| |||||    
T  29645675 atattctcatagtgatagtgatgtacttcaccattcgacctgaaacttctacgtatcctagatataggattcaatttctttgtagacgttcaaatgttgt 29645774  T
Q  381 ccgtaacaggatgactataaagt 403  Q
      |||| ||||||||||||||||    
T  29645775 ttgtaaaaggatgactataaagt 29645797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 6094129 - 6094161
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  6094129 catttctttattgattttgttttgtttcaaaat 6094161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 24642655 - 24642687
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  24642655 catttctttattgattttgttttgtttcaaaat 24642687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 28554885 - 28554921
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaat 28554921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 8968076 - 8968015
Alignment:
Q  369 ttcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    |||||||||||||| ||| | ||||| |||||||| |  ||||||||||||||| |||||||    
T  8968076 ttcaaacgttgtccataaaaagatgattataaagtcgactgatgggtactccataaatcatg 8968015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 38082291 - 38082195
Alignment:
Q  2 taaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||| ||||  ||||| ||||||||||  ||||| ||||||||||| |  ||||||  || ||||||||||| | |||||| |||||||||||||    
T  38082291 taaacataactttcgtagcctaagaggcact-tttttcattcaataaaaattatcgagaacttttctcaattctgatagattcctgaaacccttattt 38082195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 22171491 - 22171527
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||| |||||||||||||||| |||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaat 22171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 24636860 - 24636892
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    ||||||||| |||||||||||||||||||||||    
T  24636860 catttctttcttgattttgttttgtttcaaaat 24636892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 32872729 - 32872609
Alignment:
Q  269 aagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcacca 368  Q
    |||| ||||||  |||| ||||||||||| ||||||||  |||||||| |  |||||||||||| || ||| ||||| | |||| ||| ||||||         
T  32872729 aagtatcataaattattatcatagtgatattggtgtatgtcacccttcaatttgaaaccactatctatccttgatgtagaagtcaagtactttgttgttg 32872630  T
Q  369 ttcaaacgttgtccgtaacag 389  Q
    |||||||||||||| ||||||    
T  32872629 ttcaaacgttgtccataacag 32872609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 41368154 - 41368106
Alignment:
Q  370 tcaaacgttgtccgtaacaggatgactataaagttggttgatgggtact 418  Q
    |||||||||||| |||||| ||| ||||||||||||||| || ||||||    
T  41368154 tcaaacgttgtctgtaacatgataactataaagttggttaataggtact 41368106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 41375125 - 41375077
Alignment:
Q  370 tcaaacgttgtccgtaacaggatgactataaagttggttgatgggtact 418  Q
    |||||||||||| |||||| ||| ||||||||||||||| || ||||||    
T  41375125 tcaaacgttgtctgtaacatgataactataaagttggttaataggtact 41375077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 7370 - 7594
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7370 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 7469  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7470 ttccacccttcgacctgaaacaactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 7569  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  7570 gttgatgggtactccatgaatcatg 7594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 7107 - 7145
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaat 7145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 221; Significance: 1e-121; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 6878 - 6654
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6878 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 6779  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6778 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccataacaggatgactataaagttg 6679  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  6678 gttgatgggtactccatgaatcatg 6654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 13894 - 13670
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13894 ttaggagtaatatttatattggattgatccgccatgagaatactacataataaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 13795  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13794 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 13695  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||| ||||||||||||||||    
T  13694 gttgatggttactccatgaatcatg 13670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 7141 - 7103
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaat 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 14157 - 14119
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaat 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 426
Target Start/End: Original strand, 15152706 - 15152926
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152706 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 15152805  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152806 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 15152905  T
Q  406 gttgatgggtactccatgaat 426  Q
    |||||||||||||||||||||    
T  15152906 gttgatgggtactccatgaat 15152926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 29328047 - 29328271
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29328047 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 29328146  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29328147 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 29328246  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
     ||||||||||||||||||||||||    
T  29328247 cttgatgggtactccatgaatcatg 29328271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 11536006 - 11535782
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11536006 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtgatgta 11535907  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11535906 ttccaacattcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 11535807  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  11535806 gttgatgggtactccatgaatcatg 11535782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 210 - 430
Target Start/End: Original strand, 12751093 - 12751313
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12751093 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 12751192  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12751193 acccttcgacctgaaaccactaggtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 12751292  T
Q  410 atgggtactccatgaatcatg 430  Q
    |||| ||||||||||||||||    
T  12751293 atggatactccatgaatcatg 12751313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 11542924 - 11542700
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  11542924 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaatgttatgaaaagtgtcataagatattctcatagtgatagtgatgta 11542825  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  11542824 ttccacccttcgacctgaaaccactatgtaccctagatgctggagtcgagtgatttgtcaccattcaaacgttgtctgtaacaggatgactataaagttg 11542725  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  11542724 gttgatgggtactccatgaatcatg 11542700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 213 - 430
Target Start/End: Original strand, 12738806 - 12739023
Alignment:
Q  213 taatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacc 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738806 taatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacc 12738905  T
Q  313 cttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatg 412  Q
     ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  12738906 gttcgacctgaaactactatgtaccctagatgttgtagtcgagtgctttgtcaccattcaaacgttgtttgtaacaggatgactataaagttggttgatg 12739005  T
Q  413 ggtactccatgaatcatg 430  Q
    ||||||||||||||||||    
T  12739006 ggtactccatgaatcatg 12739023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 13392413 - 13392637
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||| |||||||||| |||||||| || ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13392413 ttaggagaaatatttatactggattgacccaccatgcgaatattacatagtaaaatttatgaaaagtgtcataagatattctcatagtgatagtggtgta 13392512  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||| ||||| ||| ||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||  |||||| |||||||||||| |||    
T  13392513 ttccaccctttgacctaaaatcactatgtaccatagatgttggagtcaggtgctttgtcaccatacaaacgttgtttgtaacaagatgactataaaattg 13392612  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||||||||    
T  13392613 gttgatgggtactccatgaatcatg 13392637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18561270 - 18561485
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||    
T  18561270 ttaggagtaatatttatattggattgaccctctatgagaatactacatagtaaaagttatgaaaagtgtcataa---------atagtgatagtggtgta 18561360  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18561361 ttccacccttcgacttgaaaccactatgtaccctagatgttggagttgagtgatttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18561460  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
     ||||| |||||| || ||||||||    
T  18561461 attgataggtactgcacgaatcatg 18561485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 206 - 436
Target Start/End: Complemental strand, 18257786 - 18257559
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||| | || || | |||||| |||||||||   || ||||||| |||||||||||||||||| | ||||| |||||||    
T  18257786 ttaggagtaatatttatattggattaacccaccgtcagaatattacatagtat--gtcatgaaaaatgtcataagatattctcacaatgataatggtgta 18257689  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| |||||||||||||||||  |||||||||| ||| || ||||||||||  |||||||||||||||  |||||| ||| ||||||||||||    
T  18257688 tatcactcttagacctgaaaccactatgatccctagatgt-ggactcaagtgctttgttgccattcaaacgttgtgtgtaacaagataactataaagttg 18257590  T
Q  406 gttgatgggtactccatgaatcatgatgatg 436  Q
    |||||||||||||  | |||||||| |||||    
T  18257589 gttgatgggtacttgaagaatcatgttgatg 18257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4303332 - 4303430
Alignment:
Q  1 ataaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  4303332 ataaacaggacttatgtagcctaagaggcacactttttgattcaataaaattattcgagattttctctcaattctagtggattccgaaaacccttattt 4303430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 2365185 - 2365407
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||||||||||||||| |||||||||| || |||||| ||| |||||||| ||  |||||| ||| ||||||||| ||||||||| |||||| |||||||    
T  2365185 ttaggagtaatatttacattggattgacccaccatgaaaatgctacataggaa--gttatgtaaa-tgtcataagttattctcattgtgataagtggtgt 2365281  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    ||| |||| |||||||| || |||||||||||||||||  |||||||| ||| ||||||   | | ||||||| |||||||||||  ||||||||||||     
T  2365282 atttcaccattcgacctaaagccactatgtaccctagaccttggagtcaagtactttgttgtcgtacaaacgtcgtccgtaacagattgactataaagtc 2365381  T
Q  405 ggttgatgggtactccatgaatcatg 430  Q
    |||||||| || ||| | ||||||||    
T  2365382 ggttgatgagtgctcaacgaatcatg 2365407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 13882882 - 13882784
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||| | ||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13882882 acttatgtatcctaagag--acactttttgattcaataaaattatttgagattttctctcaattctggtggattccggaaacccttattttgataggttt 13882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 2204634 - 2204854
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  2204634 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 2204730  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  2204731 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 2204829  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  2204830 gttgatgggcacttgatgaatcatg 2204854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 8465081 - 8465301
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  8465081 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 8465177  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  || |||||| |||| || ||||||||||  |||||| ||| ||||| |||| ||||| |  |||| ||||    
T  8465178 tatcgctcttagacctgaaaccactatgatccttagatg-tggactcaagtgctttgttgccattctaacattgtctgtaaaaggataatcataacgttg 8465276  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  8465277 gttgatgggtacttgatgaatcatg 8465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18400186 - 18400406
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  18400186 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 18400282  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  18400283 tatcgctcttggacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 18400381  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  18400382 gttgatgggcacttgatgaatcatg 18400406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18407170 - 18407390
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  18407170 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 18407266  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  18407267 tatcgctcttggacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 18407365  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  18407366 gttgatgggcacttgatgaatcatg 18407390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 41681184 - 41680968
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||| |||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| | ||||||  |    
T  41681184 gagtaatatttatactggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataatagtgtatatc 41681088  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
     | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||| ||||| |||| ||||| || |||| ||||||||    
T  41681087 gctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacattgtctgtaaaaggataaccataacgttggttg 41680989  T
Q  410 atgggtactccatgaatcatg 430  Q
    || ||||||  ||||||||||    
T  41680988 attggtacttgatgaatcatg 41680968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 48808716 - 48808496
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  48808716 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 48808620  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  48808619 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 48808521  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  48808520 gttgatgggcacttgatgaatcatg 48808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 13886384 - 13886286
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||| | ||||||  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13886384 acttatgtatcctaagag--acactttttgattcaataaaatcattcgagattttctctcaattatggtggattctggaaacccttattttgataggttt 13886287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 15729833 - 15730053
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  15729833 ttagaagtaatatttatattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 15729929  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |    | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  15729930 tattgctcttagacctgaaaccactatgatctctagatgt-ggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 15730028  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  15730029 gttgatgggtacttgatgaatcatg 15730053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 18139558 - 18139338
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||| ||||||||||| || |  |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| |  ||||    
T  18139558 ttaggagtaatatttgtattggattgacccactgtgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataataatgta 18139462  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | |||||||| ||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  18139461 tatcgctcttagacctgaaaccactatgatctctagatgt-ggattcaagtgctttgttgccattctaacgttgtctgtaaaaggataataataacgttg 18139363  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  18139362 gttgatgggtacttgatgaatcatg 18139338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 19230970 - 19231190
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || || |||||||||||||||  | |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  19230970 ttaggagtaatatttatactggattgacccaccgtgagaatactacata--ataagttatg-aaattgtcataagatattctcacaatgataataatgta 19231066  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||| ||| |||| || |||| |||||  |||||| ||||||||  |||| ||||| || |||| ||||    
T  19231067 tatcgctcttagacctgaaaccactatgatccctaaatg-tggactcaagtgttttgttgccattctaacgttgtttgtaaaaggataaccataacgttg 19231165  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  19231166 gttgatgggtacttgatgaatcatg 19231190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 418
Target Start/End: Original strand, 30254220 - 30254428
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||| ||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  30254220 ttaggagtaatatttgtattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 30254316  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |   || ||| ||| |||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  30254317 tattactcttagacttgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 30254415  T
Q  406 gttgatgggtact 418  Q
    |||||||||||||    
T  30254416 gttgatgggtact 30254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 34128655 - 34128875
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||| |||||    ||||||||||||||||||   ||||||| |  |||||||||||||||||| | | ||| | |||||    
T  34128655 ttaggagtaatatttatactggatagatccattgtgagaatactacatagtac--gttatgagat-tgtcataagatattctcacaattataatagtgta 34128751  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  |||||||||| ||| || ||| ||||||   ||||| ||||||||| |||| ||||| || |||| ||||    
T  34128752 tatcgctcttagacctgaaaccactatgatccctagatgt-ggactcaagtactttgttgtcattctaacgttgtctgtaaaaggataaccataacgttg 34128850  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  34128851 gttgatgggtacttgatgaatcatg 34128875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 418
Target Start/End: Complemental strand, 47167075 - 47166871
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||| | ||| || || || |||||||||||||||||||  ||||||| |  |||||||||||||||||| | ||||| | ||||||  |    
T  47167075 gagtaatatttatactagatagacccaccgtgagaatactacatagtaa--gttatgagat-tgtcataagatattctcacaatgataatagtgtatatc 47166979  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
     | ||| |||||||||||||||||  ||||||||| |||| || ||| ||||||   ||||| ||||||||| |||| ||||| || |||| ||||||||    
T  47166978 gctcttagacctgaaaccactatgatccctagatg-tggactcaagtactttgttgtcattctaacgttgtctgtaaaaggataaccataacgttggttg 47166880  T
Q  410 atgggtact 418  Q
    |||||||||    
T  47166879 atgggtact 47166871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 430
Target Start/End: Complemental strand, 18259339 - 18259124
Alignment:
Q  211 agtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcca 310  Q
    ||||||||||||| ||||| || || || |||||||||| ||||||||  ||||||| |  |||||||||||||||||| | ||||| | ||||||  |     
T  18259339 agtaatatttatactggatagacccaccgtgagaatactgcatagtaa--gttatgagat-tgtcataagatattctcacaatgataatagtgtatatcg 18259243  T
Q  311 cccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttga 410  Q
    | ||| |||||||||||  ||||  |||||||||| ||| || ||| ||||||  |||||| ||||||||| |||| ||||| || |||| |||||||||    
T  18259242 ctcttagacctgaaacccttatgatccctagatgt-ggactcaagtactttgttgccattctaacgttgtctgtaaaaggataaccataacgttggttga 18259144  T
Q  411 tgggtactccatgaatcatg 430  Q
    ||||||||  ||||||||||    
T  18259143 tgggtacttgatgaatcatg 18259124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 859362 - 859254
Alignment:
Q  1 ataaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||||||| ||||||||||| ||| | ||||||||||  ||||| ||| | |||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  859362 ataaacataacttatgtagcctaaaatgcacactttt--attcattaataatatttgagacttttctctcaattctggtggattccggaaacctttattt 859265  T
Q  100 tgataggtttg 110  Q
    |||||||||||    
T  859264 tgataggtttg 859254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1217366 - 1217258
Alignment:
Q  1 ataaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||||||| ||||||||||| ||| | ||||||||||  ||||| ||| | |||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  1217366 ataaacataacttatgtagcctaaaatgcacactttt--attcattaataatatttgagacttttctctcaattctggtggattccggaaacctttattt 1217269  T
Q  100 tgataggtttg 110  Q
    |||||||||||    
T  1217268 tgataggtttg 1217258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 408
Target Start/End: Complemental strand, 24443547 - 24443349
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | |||| | || || ||||| ||||||||||||   |||||||||| ||||||||| |||||||| ||||||| |||||||    
T  24443547 ttaggagtaatatttatactagattaacccaccgtgagagtactacatagtat--gttatgaaaa-tgtcataagttattctcacagtgataatggtgta 24443451  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| ||| |||||||| ||||  |||||||||| ||| || |||||||| |    |||||||||||||  ||||||||||||| |||| ||||    
T  24443450 taacactcttagacttgaaaccattatgatccctagatgt-ggactcaagtgctttattgttattcaaacgttgtgtgtaacaggatgaccataacgttg 24443352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 408
Target Start/End: Complemental strand, 25845696 - 25845498
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||||||  | || |||||||||||||||||  | |||||||||| | |||||||||||||||| | | ||| || ||||    
T  25845696 ttaggagtaatatttatactggattgacacaccgtgagaatactacatagt--atgttatgaaaa-tatcataagatattctcaaaataataatgatgta 25845600  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||| ||| |||||||||||| ||||  ||||||||| |||| || |||||||| |  |||||||||| || || |||| | ||| ||||||| ||||    
T  25845599 taccactcttagacctgaaaccattatgatccctagatg-tggactcaagtgctttatttccattcaaaccttatctgtaaaaagataactataacgttg 25845501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 408
Target Start/End: Complemental strand, 25846115 - 25845917
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| ||||||||  | || |||||||||||||||||  | |||||||||| | |||||||||||||||| | | ||| || ||||    
T  25846115 ttaggagtaatatttatactggattgacacaccgtgagaatactacatagt--atgttatgaaaa-tatcataagatattctcaaaataataatgatgta 25846019  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||| ||| |||||||||||| ||||  ||||||||| |||| || |||||||| |  |||||||||| || || |||| | ||| ||||||| ||||    
T  25846018 taccactcttagacctgaaaccattatgatccctagatg-tggactcaagtgctttatttccattcaaaccttatctgtaaaaagataactataacgttg 25845920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 208 - 430
Target Start/End: Original strand, 28130645 - 28130863
Alignment:
Q  208 aggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtatt 307  Q
    |||||||||||||||| |||||||| || |  |||||||| |||||||||   |||||||||  |||||||||||||||||| | | ||| | ||||||     
T  28130645 aggagtaatatttatactggattgacccactgtgagaatattacatagtat--gttatgaaat-tgtcataagatattctcacaataataatagtgtata 28130741  T
Q  308 ccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggt 407  Q
     ||  ||| ||||||||| |||||||  || ||||||| ||| || ||||||||||   ||||| ||||||||| |||| ||||| || |||| ||||||    
T  28130742 tcattcttagacctgaaatcactatgatccgtagatgt-ggactcaagtgctttgttgtcattctaacgttgtctgtaaaaggataaccataacgttggt 28130840  T
Q  408 tgatgggtactccatgaatcatg 430  Q
    |||||||||||  ||||||||||    
T  28130841 tgatgggtacttaatgaatcatg 28130863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 10669122 - 10668901
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctc-atagtgatagtggtgt 304  Q
    |||||||||||||||||| | |||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||   | ||||| | ||||    
T  10669122 ttaggagtaatatttatactagattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcgcaattgataatagtgt 10669026  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    ||  | | ||| |||||||||||||||||  || || ||| |||| || | ||||||||  |||||| ||||||||| |||| ||||| |  |||| |||    
T  10669025 atatcgctcttagacctgaaaccactatgatccgtaaatg-tggactcaaatgctttgttgccattctaacgttgtctgtaaaaggataaaaataacgtt 10668927  T
Q  405 ggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||  ||||||||||    
T  10668926 ggttgatgggtacttgatgaatcatg 10668901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 344
Target Start/End: Complemental strand, 31190659 - 31190524
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||| |||||||||| |||||||| || ||||||||||||||||| |||   |||||||| | |||| ||||||||||||||||||||| |||||||    
T  31190659 ttaggagcaatatttatactggattgacccaccatgagaatactacattgtat--gttatgaata-tgtcttaagatattctcatagtgataatggtgta 31190563  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatg 344  Q
    |  |||  || ||||||||||||||| |  |||||||||    
T  31190562 tatcactgttagacctgaaaccactaagatccctagatg 31190524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 419
Target Start/End: Original strand, 39112138 - 39112275
Alignment:
Q  282 tattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 381  Q
    ||||||| |||||||||||||||||||||   ||| || ||||| |||||||||| |||||||| ||| || |||  |||||   | |||||||||||||    
T  39112138 tattctcttagtgatagtggtgtattccattattcaacatgaaatcactatgtactctagatgtaggaatcaagtattttgttgtcgttcaaacgttgtc 39112237  T
Q  382 cgtaacaggatgactataaagttggttgatgggtactc 419  Q
     |||| | | |||||||||||||||||||| |||||||    
T  39112238 tgtaataaggtgactataaagttggttgataggtactc 39112275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4300448 - 4300511
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaatt 73  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  4300448 acttatgtagcctaagagacacactttttgattcaatcaaattatttgagattttctctcaatt 4300511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 392
Target Start/End: Complemental strand, 19393644 - 19393462
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | |||||| |  || |||||||||||||||||  | |||||||||| | |||||||||||||||| | ||||| | |||||    
T  19393644 ttaggagtaatatttatactagattgaccgaccgtgagaatactacatagt--atgttatgaaaa-tctcataagatattctcacaatgataatagtgta 19393548  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggat 392  Q
    |  ||| ||| |||||||| ||| ||||  ||||||||||| || || |||||||||| ||| ||| || |||||| |||| |||||    
T  19393547 tatcactcttagacctgaatccagtatgatccctagatgtt-gactcaagtgctttgttacctttctaatgttgtctgtaaaaggat 19393462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 31577359 - 31577281
Alignment:
Q  32 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  31577359 actttttcattcaataaaaatattcaagacttttctctcaattctggtggatttcggaaaccctta-tttgataggtttg 31577281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 345
Target Start/End: Original strand, 19388634 - 19388774
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaa--aagttatgaaaagtgtcataagatattctcatagtgatagtggtg 303  Q
    |||||||||||||||||| |||||||  |   |||||||||||||||||   |  | ||||||||| |||||||||||||||||||||||| || | |||    
T  19388634 ttaggagtaatatttatactggattgcccaatcatgagaatactacatatatagtatgttatgaaa-gtgtcataagatattctcatagtggtaatagtg 19388732  T
Q  304 tattccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    ||| |||| ||| |||||||||||| ||||  ||||||||||    
T  19388733 tataccactcttagacctgaaaccattatgagccctagatgt 19388774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 14591932 - 14592153
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || || ||||||||||||| |||    |||||||||| |||||||||||||||||| | ||||| | |||||    
T  14591932 ttaggagtaatatttatactggattgacccaccgtgagaatactacacagt--ttgttatgaaaa-tgtcataagatattctcagattgataatagtgta 14592028  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| ||| |||||||||||||  ||||| |||| |   |  | | |||| |  |||||| ||||||||| |||| ||||| || |||| ||||    
T  14592029 tatcactcttagacttgaaaccactatgatccctatatgtggacttacatttctttattgccattctaacgttgtctgtaaaaggataaccataacgttg 14592128  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    | | |||||||||  ||||||||||    
T  14592129 gctaatgggtacttgatgaatcatg 14592153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 16011523 - 16011744
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || |||||||||||||| | |||    |||||||||| |||||||||||||||||| | ||||| |  ||||    
T  16011523 ttaggagtaatatttatactggattgacccaccatgagaatactatacagt--ttgttatgaaaa-tgtcataagatattctcacattgataataatgta 16011619  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| |||||||||||||||||  ||||| |||| |   |  | | |||| |  |||||| ||||||||| |||| ||||| || |||| ||||    
T  16011620 tatcactcttagacctgaaaccactatgatccctatatgtggacttacatttctttattgccattctaacgttgtctgtaaaaggataaccataatgttg 16011719  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    | | |||||||||  ||||||||||    
T  16011720 gctaatgggtacttgatgaatcatg 16011744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 5678408 - 5678340
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtg 79  Q
    ||||||| ||||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5678408 acttatgcagcttaagag--acactttttcattcaataaaattattcgagacttttctctcaattctggtg 5678340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 5703460 - 5703392
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtg 79  Q
    ||||||| ||||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5703460 acttatgcagcttaagag--acactttttcattcaataaaattattcgagacttttctctcaattctggtg 5703392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 430
Target Start/End: Complemental strand, 15169474 - 15169290
Alignment:
Q  242 agaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctag 341  Q
    ||||||||||||||||   |||||||||| |||||||||||||||||| | ||||| |||||||| | || ||| | ||| |||||||||||  ||| ||    
T  15169474 agaatactacatagtat--gttatgaaaa-tgtcataagatattctcacaatgataatggtgtatgctactcttagtcctaaaaccactatgatcccaag 15169378  T
Q  342 atgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    ||| |||| |  | |||||| |  ||||||||||||| ||  ||||||||| || |||| |||||||||| || |||  ||||||||||    
T  15169377 atg-tggacttaaatgctttattgccattcaaacgttatctataacaggataaccataacgttggttgataggcacttgatgaatcatg 15169290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 22969032 - 22969153
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||| ||||||   |||||| || || ||||||||||||||||||   |||||||||| |||||||||||||||||| | |||||  ||||||    
T  22969032 ttaggagtaatgtttatacaagattgacccaccgtgagaatactacatagtat--gttatgaaaa-tgtcataagatattctcacaatgataacggtgta 22969128  T
Q  306 ttccacccttcgacctgaaaccact 330  Q
    | |||| ||| |||||||| |||||    
T  22969129 taccactcttagacctgaagccact 22969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 22948574 - 22948499
Alignment:
Q  281 atattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagt 356  Q
    |||||||| |||| ||||| |||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| ||||    
T  22948574 atattctcgtagtaatagtcgtgtatgccacccttcgacatgaaaccgctatgtaccttagatgtaggagttgagt 22948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 11536269 - 11536231
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaat 11536231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 29327784 - 29327822
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaat 29327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 18258047 - 18258011
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaat 18258011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18561009 - 18561045
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaat 18561045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 4668370 - 4668274
Alignment:
Q  2 taaacatgacttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||| ||||||| ||| ||||||||||  ||||| ||| || |||| ||||||||| |||||||| ||||| ||||||||  ||||||||||||||    
T  4668370 taaacataacttatgcagcctaagaggcac--tttttcattgaaaaaaaatattcgagacttttctcttaattcaggtggattatggaaacccttattt 4668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 11543187 - 11543149
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaat 11543149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 12750828 - 12750862
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaa 195  Q
    |||||||||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaa 12750862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  159 acaaggcatttctttattgattttgttttgttt 191  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 15148144 - 15148180
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaat 15148180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 15152445 - 15152481
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaat 15152481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 32936926 - 32936869
Alignment:
Q  40 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||    
T  32936926 attcaataaaattat-cgagaattt-tctcaattatggtggattccgaaaacccttattt 32936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 22572530 - 22572497
Alignment:
Q  66 tctcaattctggtggattccggaaacccttattt 99  Q
    |||||||||| |||||||||||||||||||||||    
T  22572530 tctcaattcttgtggattccggaaacccttattt 22572497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 12738542 - 12738574
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||| ||||||||||||||    
T  12738542 catttctttattgattttattttgtttcaaaat 12738574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 29984308 - 29984372
Alignment:
Q  276 ataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtacccta 340  Q
    |||||||||||||||||||  |||| || ||  |||||||| || ||||||||| ||||||||||    
T  29984308 ataagatattctcatagtggaagtgatgcatatcacccttcaacttgaaaccaccatgtacccta 29984372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18551 - 18774
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18551 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 18650  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18651 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 18750  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||| ||||||||||||||||||    
T  18751 gttgat-ggtactccatgaatcatg 18774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 18288 - 18326
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaat 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 210 - 430
Target Start/End: Complemental strand, 21330188 - 21329968
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330188 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 21330089  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21330088 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtaggttg 21329989  T
Q  410 atgggtactccatgaatcatg 430  Q
    ||||| |||||||||||||||    
T  21329988 atggggactccatgaatcatg 21329968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 18796769 - 18796993
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18796769 ttaggagtaatatttatattggattgatcctctatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatggtggtgta 18796868  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  18796869 ttccacccttcgacctgaaaccactatgtaccctaaatgttggagtcgagtgctttgtcaccattcaaacgttgtacgtaacaggatgactataaagttt 18796968  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||| ||||||||||||    
T  18796969 gttgatgggtacaccatgaatcatg 18796993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 206 - 436
Target Start/End: Original strand, 18620067 - 18620296
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  18620067 ttaggagtaatatttatactagattgacccaccatgagaatactacatagtaaaagttatgaaa-gtgtcataagatattctcatggtgatattggtgta 18620165  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |   |||  |||||| |||||| |||||||||    
T  18620166 tcccaccctttgacctgaaaccactatgtaccctaaatgttggagtcgagtgctttatcaccattcacattatgtatgtaacaagatgaccataaagttg 18620265  T
Q  406 gttgatgggtactccatgaatcatgatgatg 436  Q
    ||||||||||||||||  ||||||| |||||    
T  18620266 gttgatgggtactccactaatcatgctgatg 18620296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 27956352 - 27956252
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27956352 acttatgtagcctaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttcataggttt 27956253  T
Q  110 g 110  Q
    |    
T  27956252 g 27956252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 27952516 - 27952416
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggttt 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27952516 acttatgtagcctaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttcaaaggttt 27952417  T
Q  110 g 110  Q
    |    
T  27952416 g 27952416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 36270429 - 36270650
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgt 304  Q
    |||||||||||||||||||||||||||  ||||||||||||  ||||||| |||  ||||| |||| |||| |||  ||||||||||||||| |||||||    
T  36270429 ttaggagtaatatttatattggattgactcgccatgagaatgttacatagaaaa--ttatgtaaag-gtcacaagtcattctcatagtgataagtggtgt 36270525  T
Q  305 attccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagtt 404  Q
    |||| |||||||||||| ||||||| ||| |||||||||||  ||||||| | ||||||  || | |||| || || ||||||||||||||||||||||     
T  36270526 attc-acccttcgacctaaaaccaccatgcaccctagatgtatgagtcgaatactttgttgccgtacaaaagtcgttcgtaacaggatgactataaagtc 36270624  T
Q  405 ggttgatgggtactccatgaatcatg 430  Q
    ||||| ||||||||| ||||||||||    
T  36270625 ggttgttgggtactcaatgaatcatg 36270650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 208 - 416
Target Start/End: Complemental strand, 6992054 - 6991847
Alignment:
Q  208 aggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtat 306  Q
    |||||||||||||||||||||||||||| |||| ||||  |||||||| |||  ||||| || ||| |||||  |||||||||||||||| |||||||||    
T  6992054 aggagtaatatttatattggattgatcctccataagaacgctacatagaaaa--ttatgtaa-gtgacataaactattctcatagtgataagtggtgtat 6991958  T
Q  307 tccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgc-tttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||||||||||| ||||||| |||||||| |||||||||| |||||||||| | |||||  |  || ||||||||||  | ||| |||||||||||||| |    
T  6991957 tccacccttcggcctgaaatcactatgttccctagatgtaggagtcgagtacttttgtttctgtttaaacgttgtctatgacacgatgactataaagtcg 6991858  T
Q  406 gttgatgggta 416  Q
    |||||||||||    
T  6991857 gttgatgggta 6991847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 33655525 - 33655619
Alignment:
Q  17 tagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttg 110  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33655525 tagcctaagaggcacactttttcattcaataaaattattcgagattttctctcaatttctggtggattccggaaacccttattttgataggtttg 33655619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 210 - 430
Target Start/End: Original strand, 20978142 - 20978360
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtattc 308  Q
    ||||||||||||||||||||||| |||||||||||||  || || | |||  ||||||||| ||||||||| ||||||| |||||||| |||||||||||    
T  20978142 gagtaatatttatattggattgacccgccatgagaattttatatggaaaa--ttatgaaaa-tgtcataagttattctcgtagtgataagtggtgtattc 20978238  T
Q  309 cacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggtt 408  Q
    ||| ||| ||| ||| || |||||||||||||||||| ||| |||||| |||||    |||  |||||| |||||||||| ||| |||||||||| | ||    
T  20978239 cactctttgacatgacactactatgtaccctagatgtaggattcgagtactttgatgtcatataaacgtagtccgtaacatgataactataaagtcgatt 20978338  T
Q  409 gatgggtactccatgaatcatg 430  Q
    ||||| |||||||  |||||||    
T  20978339 gatggatactccacaaatcatg 20978360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 30174459 - 30174679
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  30174459 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 30174555  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  30174556 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 30174654  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  30174655 gttgatgggcacttgatgaatcatg 30174679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 24250252 - 24250032
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  24250252 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 24250156  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || |||| |||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  24250155 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgttttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 24250057  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  24250056 gttgatgggcacttgatgaatcatg 24250032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 212 - 418
Target Start/End: Original strand, 18822352 - 18822556
Alignment:
Q  212 gtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgata-gtggtgtattcca 310  Q
    ||||||||||||||||||||||| ||||||||| |  ||||||  ||| |||||| ||||  ||  |||  |||||||||  |||| |||||||||||||    
T  18822352 gtaatatttatattggattgatctgccatgagattgttacata--aaacgttatgtaaaga-tctcaagtcattctcatatagataagtggtgtattcca 18822448  T
Q  311 cccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttga 410  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||| |||| |   |||  ||||||  |||||||||  |||||||||||||||||| |    
T  18822449 cccttcgacctgaaaccactgtgtaccctagatgtaggagtcaagtacttttttgtcatataaacgtcatccgtaacacaatgactataaagttggttaa 18822548  T
Q  411 tgggtact 418  Q
    ||||||||    
T  18822549 tgggtact 18822556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 418
Target Start/End: Complemental strand, 15342222 - 15342014
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||| | || || ||| ||||||||||||||   ||||||||| ||||||||||||| ||||| | |||||||||||||    
T  15342222 ttaggagtaatatttatactggattaacccaccgtgaaaatactacatagtat--gttatgaaa-gtgtcataagatagtctcacaatgatagtggtgta 15342126  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||| ||| |||||||||||||||||  ||||||||| || | || | |||||| |  | |||||||  ||||  ||||||||||||| |||| ||||    
T  15342125 tgccactcttagacctgaaaccactatgatccctagatg-tgaactcaaatgctttattgcaattcaaaaattgtttgtaacaggatgaccataacgttg 15342027  T
Q  406 gttgatgggtact 418  Q
    ||| |||||||||    
T  15342026 gttaatgggtact 15342014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 24229435 - 24229215
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| | |||||    
T  24229435 ttaggagtaatatttatactggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataatagtgta 24229339  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| | | |||||||||||||  ||||||||| | || || ||||||||||   ||||| ||||||||| |||| ||||| || |||| ||||    
T  24229338 tatcgctcttagccttgaaaccactatgatccctagatg-tagactcaagtgctttgttgtcattctaacgttgtctgtaaaaggataaccataacgttg 24229240  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||| |||||||  ||||||||||    
T  24229239 gttgaagggtacttgatgaatcatg 24229215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 430
Target Start/End: Original strand, 17241034 - 17241196
Alignment:
Q  267 aaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcac 366  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||  ||||||| |||||| ||| |||| ||||    
T  17241034 aaaagtgtaataagatattctcatagtgataatggtgtatttcacc-ttcgacctaaaaccactatgtactgtagatgtaggagtcaagtactttatcac 17241132  T
Q  367 cattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    |  |||||||||||  |||||| || | ||||||| | ||| |||  ||||| |||||| ||||    
T  17241133 cgctcaaacgttgtgtgtaacatgaagcctataaaatcggtagatatgtacttcatgaaacatg 17241196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 432
Target Start/End: Original strand, 29800553 - 29800775
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || || |||||||||||||||||  | ||||| |||||||| | | |||||||||| |  |||| |||||||    
T  29800553 ttaggagtaatatttatactggattgacccaccgtgagaatactacatagt--atgttat-aaaagtgtaacatgatattctcacaaggataatggtgta 29800649  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    | |||| ||| ||| |||||||||||||  ||||||||| |||| || |||||||| |   ||||||||| ||||| |||||||||| |  |||| ||||    
T  29800650 taccactcttagacttgaaaccactatgatccctagatg-tggactcaagtgctttattgtcattcaaacattgtctgtaacaggataatcataatgttg 29800748  T
Q  406 gttgatgggtactccatgaatcatgat 432  Q
    ||| ||||| |||  | ||||||||||    
T  29800749 gttaatgggcacttgacgaatcatgat 29800775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 22183354 - 22183206
Alignment:
Q  283 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 381  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||   ||||| || ||||| |||||||||| ||||||     | ||||||||||     
T  22183354 attctcatagtgataagtggtgtattccaccctttgacctgaaaccaacgtgtactcttgatgtaggagtcgagtactttgttgttgtacaaacgttgtt 22183255  T
Q  382 cgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
     ||||||||||||||||||||| | |||||||||| |  ||||||||||    
T  22183254 tgtaacaggatgactataaagtcgattgatgggtatttgatgaatcatg 22183206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 22011324 - 22011427
Alignment:
Q  10 acttatgtagcttaagaggcacactttt--tgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgatagg 106  Q
    ||||||||||| |||||| |  ||||||  | ||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22011324 acttatgtagcctaagagaccgacttttatttattcattaataatattcgagacttttctctcaattctggtggattccggaaacccttattttgatagg 22011423  T
Q  107 tttg 110  Q
    ||||    
T  22011424 tttg 22011427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 2155859 - 2155958
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| ||| |||||| |||||||||  ||||||||| | ||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2155859 acttatgcagcctaagagacacactttt--attcaataataatattcaagacttttctctcaattctgatggattccgaaaacccttattttgataggtt 2155956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 8781408 - 8781503
Alignment:
Q  12 ttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||| ||| ||||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||||    
T  8781408 ttatgcagcctaagaggcact-tttttcattcaataaaattattcgagatttactctcaattctggtggatttc-gaaaccctta-tttgataggtttg 8781503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 22264347 - 22264414
Alignment:
Q  31 cactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttatt 98  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||| |||||    
T  22264347 cactttttgattcaataaaattattcgagattttatctcaattctgatggattctagaaacctttatt 22264414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 31633996 - 31634095
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| |||  |||||||| ||||||| ||||| ||| | |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31633996 acttatgcagccgaagaggca-acttttttattcattaataatatttgagattttctctcaatttctggtggattccg-aaacccttattttgataggtt 31634093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 31636229 - 31636328
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtt 108  Q
    |||||||||||  ||||| || ||||||| ||||| ||| | ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  31636229 acttatgtagccgaagagaca-acttttttattcattaataatattcaagattttctctcaatttctggtggattccgg-aacccttattttgataggtt 31636326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 345
Target Start/End: Original strand, 19616517 - 19616653
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||| ||||||  || ||||| || || ||||||||||||||||||    ||||||||| ||||||| |||||||||| ||||||| | |||||    
T  19616517 ttaggagtaacatttattctgaattgacccaccgtgagaatactacatagtatt--ttatgaaaa-tgtcatatgatattctcacagtgataatagtgta 19616613  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    |  ||| ||| |||||||||||||||||  ||||||||||    
T  19616614 tatcactcttagacctgaaaccactatgatccctagatgt 19616653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 332
Target Start/End: Complemental strand, 40301156 - 40301034
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||| |||||||||||||   |||||| || ||||||||||||||||||  | | ||||||  ||||||||||||||| ||||||||||||| || ||||    
T  40301156 ttagaagtaatatttataccagattgacccaccatgagaatactacata--acatgttatg--aagtgtcataagatagtctcatagtgataatgatgta 40301061  T
Q  306 ttccacccttcgacctgaaaccactat 332  Q
    | |||| ||| ||| ||||||||||||    
T  40301060 taccactcttagacatgaaaccactat 40301034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 36799826 - 36799745
Alignment:
Q  283 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgt 363  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||    
T  36799826 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgt 36799745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 333
Target Start/End: Original strand, 21626836 - 21626955
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||| ||||| || ||||||||||||||||   ||   ||||||||| ||||||||||||||||||||||||||| | |||| | ||    
T  21626836 gagtaatatttatattgaattga-ccaccatgagaatactacacgctat--gttatgaaa-gtgtcataagatattctcatagtgataatagtgtctacc 21626931  T
Q  310 acccttcgacctgaaaccactatg 333  Q
    ||  || ||||||||| |||||||    
T  21626932 actgttagacctgaaatcactatg 21626955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 405
Target Start/End: Complemental strand, 41316496 - 41316305
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    |||||||||||||| |  || || || ||||||||||| || ||||||   ||||||||| ||||||||||||||||||||| |||||  || | || ||    
T  41316496 gagtaatatttatacttaatcgacccaccatgagaatattatatagtat--gttatgaaa-gtgtcataagatattctcatactgataacggagaatacc 41316400  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| |||||||| ||||||||  ||||||||| |||| |  || ||||| |   |||||||||||| || |||||||||| ||||||||||||    
T  41316399 attcttagacctgaatccactatgatccctagatg-tggacttaagggctttattgtcattcaaacgttatctgtaacaggataactataaagttg 41316305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 41661694 - 41661761
Alignment:
Q  363 tcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    |||||||||||||||||||  ||| | |||||  ||||||||||||||||||||||||||||| ||||    
T  41661694 tcaccattcaaacgttgtctataataagatgatcataaagttggttgatgggtactccatgaaacatg 41661761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 28740986 - 28740910
Alignment:
Q  269 aagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccctagatgt 345  Q
    ||||||||||||| ||||||||| ||||| |||||||| |||  ||| || ||||||||||||||  ||||||||||    
T  28740986 aagtgtcataagacattctcataatgataatggtgtataccattcttagatctgaaaccactatgatccctagatgt 28740910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 21330455 - 21330417
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaat 21330417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 44675368 - 44675330
Alignment:
Q  61 ttttctctcaattctggtggattccggaaacccttattt 99  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  44675368 ttttctctcaattctggtggattccgaaaacccttattt 44675330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 19692737 - 19692705
Alignment:
Q  165 catttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||    
T  19692737 catttctttattgattttgttttgtttcaaaat 19692705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 2165815 - 2165914
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| ||| |||||| |||| ||||  ||||| ||| | ||||||||| ||||||||||||| |||||||||| | ||||  ||||||||||| |||    
T  2165815 acttatgcagcctaagagacacattttt--attcattaataatattcgagacttttctctcaattttggtggattctgaaaacatttattttgataagtt 2165912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 19279554 - 19279600
Alignment:
Q  209 ggagtaatatttatattggattgatccgccatgagaatactacatag 255  Q
    ||||||||||||||||||||||||  || ||||||||||| ||||||    
T  19279554 ggagtaatatttatattggattgacacgtcatgagaataccacatag 19279600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 18725772 - 18725692
Alignment:
Q  30 acactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttg 110  Q
    ||||||||| |||||||||||||||| || | |||||||| |||| | ||||| ||| |||||| ||| |||||||||||||    
T  18725772 acactttttcattcaataaaattatttgaaacttttctcttaattttagtggaatccagaaaccttta-tttgataggtttg 18725692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18619807 - 18619843
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||| |||||||| |||||||||||||||||||||||    
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaat 18619843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 210 - 411
Target Start/End: Original strand, 1260 - 1461
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcc 309  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1260 gagtaatatttatattggattgatctgccatgagaatactacatagtaaaagttatgaaaagtatcataagatattctcatagtgatagtggtgtattcc 1359  T
Q  310 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttg 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  1360 acccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggataaatataaagttggttg 1459  T
Q  410 at 411  Q
    ||    
T  1460 at 1461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 993 - 1031
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 230335 - 230111
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  230335 ttaggagtaatatttatattggattgatctgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 230236  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||    
T  230235 ttctacccttcgacctgaaaccattatgtaccctagatgttggagtcgagtgctttgtcactattcaaacgttgtctgtaacaagatgacaataaagttg 230136  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||| ||| ||| ||||||||||||    
T  230135 gttggtggatacaccatgaatcatg 230111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 230545 - 230509
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaat 230509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 159; Significance: 2e-84; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 206 - 434
Target Start/End: Original strand, 5792 - 6013
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaa-gtgtcataagatattctcatagtgatagtggtgt 304  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||              
T  5792 ttaggagtaatatttatattggattgatccgccatgtgaatactacatagtaaaagttatgaaaaagtgtcataagatattctcatagtgc--------- 5882  T
Q  305 attccaccctt-cgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagt 403  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5883 attccatcctttcgacatgaaaccactatgtaccctagatgttggagtcaagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagt 5982  T
Q  404 tggttgatgggtactccatgaatcatgatga 434  Q
    ||||||||||||||||||| |||||||||||    
T  5983 tggttgatgggtactccatcaatcatgatga 6013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 5531 - 5567
Alignment:
Q  161 aaggcatttctttattgattttgttttgtttcaaaat 197  Q
    |||||||||||||||||||||  ||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaat 5567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 418
Target Start/End: Complemental strand, 13169 - 12961
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||  ||||||| || || ||||||||||||||||||   |||||||||  |||||||||||||||||||| ||||| | |||||    
T  13169 ttaggagtaatatttataccggattgacccaccgtgagaatactacatagtat--gttatgaaat-tgtcataagatattctcataatgataatagtgta 13073  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| |||||||||||||||||  ||||||||| |||| || | ||||||||  |||||| ||||||||  |||| ||||| || |||||||||    
T  13072 tatcactcttagacctgaaaccactatgatccctagatg-tggactcaattgctttgttgccattctaacgttgtttgtaaaaggataaccataaagttg 12974  T
Q  406 gttgatgggtact 418  Q
    |||||||||||||    
T  12973 gttgatgggtact 12961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 265 - 485
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  265 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 361  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| |  |||| ||||    
T  362 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataatcataacgttg 460  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  461 gttgatgggtacttgatgaatcatg 485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 67594 - 67374
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| | | |||||| ||||||||||| | ||||| | |||||    
T  67594 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-agattgtcatgagatattctcacaatgataatagtgta 67498  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||| ||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  67497 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtactttgtttccattctaacgttgtctgtaaaaggataaccataacgttg 67399  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    |||||||||||||  ||||||||||    
T  67398 gttgatgggtacttgatgaatcatg 67374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 3895 - 3675
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  3895 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 3799  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  3798 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 3700  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  3699 gttgatgggcacttgatgaatcatg 3675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 119812 - 120032
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  119812 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 119908  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  | | ||| |||||||||||||||||  | ||||||| |||| || ||||||||||  |||||| ||||||||| |||| ||||| || |||| ||||    
T  119909 tatcgctcttagacctgaaaccactatgatctctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggataacaataacgttg 120007  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    ||||||||| |||  ||||||||||    
T  120008 gttgatgggcacttgatgaatcatg 120032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 430
Target Start/End: Original strand, 26624 - 26844
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| |||||||| || || ||||||||||| ||||||   |||||||||| |||||||||||||||||| ||||||| | |||||    
T  26624 ttaggagtaatatttatactggattgacccaccttgagaatactatatagtat--gttatgaaaa-tgtcataagatattctcacagtgataatagtgta 26720  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |  ||| ||| |||||||||||||||||  ||||| ||| |||| ||||||||||| |   ||||  || |||||| |||| ||||| || |||| ||||    
T  26721 tatcactcttagacctgaaaccactatgatccctatatg-tggactcgagtgctttattgtcattttaatgttgtctgtaaaaggataaccataacgttg 26819  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    | | |||||||||| ||||||||||    
T  26820 gataatgggtactcgatgaatcatg 26844  T

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Target: scaffold0001 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 392
Target Start/End: Complemental strand, 130444 - 130262
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  130444 ttaggagtaatatttatattggattgacccactgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 130348  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggat 392  Q
    |  | | ||| |||||||||||||||||  ||||||||| |||| || ||||||||||  |||||| ||||||||| |||| |||||    
T  130347 tatcgctcttagacctgaaaccactatgatccctagatg-tggactcaagtgctttgttgccattctaacgttgtctgtaaaaggat 130262  T

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Target: scaffold0297 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 430
Target Start/End: Original strand, 102 - 288
Alignment:
Q  240 tgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattccacccttcgacctgaaaccactatgtaccct 339  Q
    |||||||||||||||||||  |||||||||  |||||||||||||||||| | ||||| | ||||||  ||| ||| |||||||||||||| ||  ||||    
T  102 tgagaatactacatagtaa--gttatgaaat-tgtcataagatattctcacaatgataatagtgtatatcactcttagacctgaaaccactctgatccct 198  T
Q  340 agatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggtactccatgaatcatg 430  Q
    ||||| |||| || ||| ||||||  |||||| ||||||||  |||| ||||| || |||| |||||||||||||||||  ||||||||||    
T  199 agatg-tggactcaagtactttgttgccattctaacgttgtatgtaaaaggataaccataacgttggttgatgggtacttgatgaatcatg 288  T

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Target: scaffold0136 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 402
Target Start/End: Original strand, 8813 - 9005
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    |||||||||||||||||| | |||||| || | ||||||||||||| |||||   |||||||| | |||||||||||||||||||||||||| |||||||    
T  8813 ttaggagtaatatttatactagattgacccccaatgagaatactacttagtat--gttatgaaga-tgtcataagatattctcatagtgataatggtgta 8909  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    | |||| | | ||||||||||||| |||  || || ||| ||||||| |||| ||| |   |||||||||||| || |||||| ||| |||||||||    
T  8910 taccactcctagacctgaaaccacaatgatccttaaatg-tggagtcaagtgttttattgtcattcaaacgttctctgtaacatgataactataaag 9005  T

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Target: scaffold0031 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 40208 - 39988
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||  ||||||| || |  ||||||||||||||||||   |||||||||| |||||||||||||||||| ||||||| |||||||    
T  40208 ttaggagtaatatttataccggattgacccactgtgagaatactacatagtat--gttatgaaaa-tgtcataagatattctcacagtgataatggtgta 40112  T
Q  306 ttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttg 405  Q
    |   || ||| ||| |||||||||||||  ||||| ||  |||| || |||||||| |  |||||| ||||||||  |||| ||||| || |||||||||    
T  40111 tataactcttagacttgaaaccactatgatccctaaat-atggactcaagtgctttatttccattctaacgttgtttgtaaaaggataaccataaagttg 40013  T
Q  406 gttgatgggtactccatgaatcatg 430  Q
    | | |||| ||||  ||||||||||    
T  40012 gctaatggttacttgatgaatcatg 39988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 8387 - 8511
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgta 305  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||  |||||||| ||| |||||||||||||||||| | ||||| |  ||||    
T  8387 ttaggagtaatatttatattggattgacccaccgtgagaatactacatagt--aagttatg-aaattgtcataagatattctcacaatgataataatgta 8483  T
Q  306 ttccacccttcgacctgaaaccactatg 333  Q
    |  | | ||| |||||||||||||||||    
T  8484 tatcgctcttagacctgaaaccactatg 8511  T

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Target: scaffold0110 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 45460 - 45360
Alignment:
Q  10 acttatgtagcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtt 108  Q
    ||||||| ||| ||||||||| || |||| ||||| ||| | |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  45460 acttatgcagcctaagaggcaaacatttttattcattaataatattcgagattttctctcaatttctggtggattctgg-aacccttattttgataggtt 45362  T
Q  109 tg 110  Q
    ||    
T  45361 tg 45360  T

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Target: scaffold0110; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 46894 - 46802
Alignment:
Q  18 agcttaagaggcacactttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttg 110  Q
    |||||||||| |||||||||| ||||| ||| | |||||||||||||||||||| || ||||||||||||| |||| | |||||||||||||||    
T  46894 agcttaagagacacacttttttattcattaataatattcgagattttctctcaatttttggtggattccgg-aaccttaattttgataggtttg 46802  T

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Target: scaffold0034 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 333
Target Start/End: Complemental strand, 83230 - 83111
Alignment:
Q  211 agtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtattcca 310  Q
    ||||||||||||| |||||||| || | |||||||||||||||||||   |||| |||  ||||||||||||||| ||||||| ||| ||||||| ||||    
T  83230 agtaatatttatactggattgacccacaatgagaatactacatagtat--gttacgaag-gtgtcataagatattatcatagtcatattggtgtactcca 83134  T
Q  311 cccttcgacctgaaaccactatg 333  Q
    | ||| |||||||||||| ||||    
T  83133 ctcttagacctgaaaccagtatg 83111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 11750 - 11526
Alignment:
Q  206 ttaggagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaa---agtgtcataagatattctcatagtgatagtggt 302  Q
    |||||||||||||||||| ||||| || || |  ||||||||||||||||||   ||||||  |   | |||||||||||||||||| | |||||   ||    
T  11750 ttaggagtaatatttatactggatagacccactgtgagaatactacatagtac--gttatgtgattaattgtcataagatattctcacaatgataacagt 11653  T
Q  303 gtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaag 402  Q
    |||   | | ||| |||||||||||||| ||  |||||||||| ||| || ||| ||||||  |||||| ||||||||| |||| ||||| || |||| |    
T  11652 gtacatcgctcttagacctgaaaccactttgatccctagatgt-ggactcaagtactttgtttccattctaacgttgtctgtaaaaggataaccataacg 11554  T
Q  403 ttggttgatgggtactccatgaatcatg 430  Q
    ||||||||||||||||  ||||||||||    
T  11553 ttggttgatgggtacttgatgaatcatg 11526  T

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Target: scaffold0251 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 8333 - 8264
Alignment:
Q  30 acactttttgattcaataaaattattcgagat-tttctctcaattctggtggattccggaaacccttattt 99  Q
    ||||||||| ||||||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  8333 acactttttcattcaatcaaatt-ttcgagatctttttctcaattctgatggattccagaaacccttattt 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 8510 - 8472
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttcaaaat 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaat 8472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 11328 - 11421
Alignment:
Q  210 gagtaatatttatattggattgatccgccatgagaatactacatagtaaaagttatgaaaagtgtcataagatattctcatagtgatagtggtgtat 306  Q
    |||||||||||||  |||||| | || ||||||||||||||||||||  | |||||||| | ||| ||||| |||||| ||||||||| ||||||||    
T  11328 gagtaatatttatgatggatttacccaccatgagaatactacatagt--atgttatgaaga-tgttataagttattctaatagtgataatggtgtat 11421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 430
Target Start/End: Original strand, 53955 - 54066
Alignment:
Q  317 gacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaacaggatgactataaagttggttgatgggta 416  Q
    |||||||||||||||||  |||||| ||| ||| || |||||||| |  |||||| ||||||||  |||| ||||| || |||| |||||||||||||||    
T  53955 gacctgaaaccactatgatccctaggtgt-ggactcaagtgctttatg-ccattctaacgttgtatgtaaaaggataaccataacgttggttgatgggta 54052  T
Q  417 ctccatgaatcatg 430  Q
    ||  ||||||||||    
T  54053 cttgatgaatcatg 54066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 192
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  159 acaaggcatttctttattgattttgttttgtttc 192  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 28744 - 28711
Alignment:
Q  66 tctcaattctggtggattccggaaacccttattt 99  Q
    ||||||||||||| ||||||||||||||||||||    
T  28744 tctcaattctggtagattccggaaacccttattt 28711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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