View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3499_high_1 (Length: 1332)
Name: NF3499_high_1
Description: NF3499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3499_high_1 |
 | |
|
| [»] chr2 (41 HSPs) |
| |
|
Alignment Details
Target: chr2 (Bit Score: 1174; Significance: 0; HSPs: 41)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 1174; E-Value: 0
Query Start/End: Original strand, 18 - 1332
Target Start/End: Complemental strand, 30385094 - 30383760
Alignment:
| Q |
18 |
atccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30385094 |
atccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccaaaaaatctttcaggattgaacattttagcatcatcaccccatagttc |
30384995 |
T |
|
| Q |
118 |
gcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaagg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384994 |
gcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaagg |
30384895 |
T |
|
| Q |
218 |
ccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagattaatgttacatgttaaggccaagcaacaaaatagt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30384894 |
ccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagattaatgttacatgttaaggccaagcaacaaaaaagt |
30384795 |
T |
|
| Q |
318 |
ctcgataaacaacaaaaccagtttgtcttgaggcttatactgaatacaagattagtgttagtatttccggacaaaagatgcaactgttgattaaaattct |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30384794 |
ctcgataaacaacaaaaccagtttgtcttgaggcttatagtgaatacaagattagtgttagaatttccggacaaaagatgcaactcttgattaaaattct |
30384695 |
T |
|
| Q |
418 |
acgaaaatgcaactcatac--------------------aacaatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaag |
497 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384694 |
acgaaaatgaaactcatatcatgagtgtgaagataataaaacaatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaag |
30384595 |
T |
|
| Q |
498 |
acatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctg |
597 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
30384594 |
acatgtaacacttcctcccttgcacgggtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaaccgaagtagtctcttgacctg |
30384495 |
T |
|
| Q |
598 |
caaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaag |
697 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384494 |
caaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaag |
30384395 |
T |
|
| Q |
698 |
aagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcg |
797 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384394 |
aagaatgctcaataagtcattcctagtgggctcacctgcctttaatgctttttccctcttgttaatcatatctttaagcgaagaggttatttctttgtcg |
30384295 |
T |
|
| Q |
798 |
attttattcatccttctatggacaattgtaggtaaaaacctacaaacaaaaatgttgaaataacgacagaaattagagaccggagaattgttatacttag |
897 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30384294 |
attttattcatctttctatggacaattgtaggcaaaaacctacaaacaaaaatgttgaaataatgacggaaattagagaccggagaattgttatacttag |
30384195 |
T |
|
| Q |
898 |
taataaaagaaaggaagtccagagttctcttacatccataaagggatgatagatttcatgacaactttcactataagttcagcttgctctctttgaagtt |
997 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384194 |
taataaaagaaaggaagtccagagttctcttacatccataaagggatgatagatttcgttacaactttcactataagttcagcttgctctctttgaagtt |
30384095 |
T |
|
| Q |
998 |
gaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcaca |
1097 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384094 |
gaaatattctttttccttcttcatagctacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcaca |
30383995 |
T |
|
| Q |
1098 |
tgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaacttatgaagaaagccggggtcataatctgttgtatattcataaagaaa |
1197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
30383994 |
tgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaacttgtgaagaaagccggggtcataatctgttgtatattcataaggaaa |
30383895 |
T |
|
| Q |
1198 |
tgactcaagacttcaaatttccagtcaaattcatataaattaacttataatctataacttgatatatcactaaccttcaacttttctaaatggaaagcag |
1297 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30383894 |
tgacttaagacttcaaatttccagtcaaattcatataaactaacttataatctataacttgatatatcactaaccttcaacttttctaaatggaaagcag |
30383795 |
T |
|
| Q |
1298 |
ggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
30383794 |
ggttgattagctttctatgcttgctccacttttct |
30383760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 442 - 877
Target Start/End: Complemental strand, 30395084 - 30394648
Alignment:
| Q |
442 |
tacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggta |
541 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30395084 |
tacttacaatctttaggttatttagcccatcaaaatctggttttttgttgccaaagacatgtaacacttcctccctagcacgtgtttgccaatcagggta |
30394985 |
T |
|
| Q |
542 |
cctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactc |
641 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||| | ||| |||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30394984 |
cctactcaacaatatcattgtccaaacaagcaaaaccgaagtagtttcttgccctgcaaaatggaacaacttgcattcctcgactacatgatcaagactc |
30394885 |
T |
|
| Q |
642 |
attcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgccttta |
741 |
Q |
| |
|
||||| ||| ||| ||||| | || | ||||||||||| ||||||| ||||||||||| ||||||||||||||| || ||| ||||| ||||||| |
|
|
| T |
30394884 |
attccaacactcttattgttgttgttattttcaatttccttatgatttgattcaagaagaatactcaataagtcattcttagtggattcaccagccttta |
30394785 |
T |
|
| Q |
742 |
atgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcgattttattcatccttctatggacaattgtaggtaaaaacctaca |
841 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||| |||| | |||| | |||||||| |
|
|
| T |
30394784 |
attctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcaatttcattcatcttcctatgcacaaatataggcagaaacctacg |
30394685 |
T |
|
| Q |
842 |
aac-aaaaatgttgaaataacgacagaaattagagac |
877 |
Q |
| |
|
||| |||||||||| ||||| ||| ||||||||||| |
|
|
| T |
30394684 |
aacaaaaaatgttgcaataatcacataaattagagac |
30394648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 925 - 1226
Target Start/End: Complemental strand, 30394296 - 30393997
Alignment:
| Q |
925 |
tcttacatccataaagggatgatagatttcatgacaactttcactataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataac |
1024 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30394296 |
tcttacatccataaagggattgtagatttcataacaactgttgttataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataac |
30394197 |
T |
|
| Q |
1025 |
tacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcacatgatccatctgaagacaacattttctc |
1124 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30394196 |
tacttccaaacgcagttcgagaaatagcatcacttgccaaattctgcagggaaggccatacgtctatttcacatgatccatctgaagacaacatttcctc |
30394097 |
T |
|
| Q |
1125 |
ccatttgttaatcaaatcattgcaacttatgaagaaagccggggtcataatctgttgtatattcataaagaaatgactcaagacttcaaatttccagtca |
1224 |
Q |
| |
|
||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| || | |||||||||||||||| |
|
|
| T |
30394096 |
ccatttgctaatcatatcattgcaacttgtgaagaaagccggggtcataatctgtcgtat-ttcataaagaaatgact-aaaaattcaaatttccagtca |
30393999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 18 - 291
Target Start/End: Complemental strand, 30395846 - 30395573
Alignment:
| Q |
18 |
atccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttc |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30395846 |
atccaaatggaaaaaatgaaactctaccatttgttgctttagaaattcctccggaaaatctctcaggattgaacattttagcatcatcgccccatagttt |
30395747 |
T |
|
| Q |
118 |
gcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaagg |
217 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
30395746 |
gcagtcatgatgaatcaaaagaattggtaagaaaacctccactccagcaggtaatgtcaggtttccaagtttcatatctttcacaacatttctagcaagt |
30395647 |
T |
|
| Q |
218 |
ccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagattaatgttac |
291 |
Q |
| |
|
|| ||||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
30395646 |
cccattactggagggtataatctaagaacctcatacaaaatcatggtgacctgttacaaaaagatttatgttac |
30395573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 440 - 778
Target Start/End: Complemental strand, 30425059 - 30424721
Alignment:
| Q |
440 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
539 |
Q |
| |
|
||||||||||||||| || | | ||||||| ||||| || ||||| |||||||||| || ||||| ||||| ||||| |||||| ||||||||||||| |
|
|
| T |
30425059 |
aatacttacgatcttaagatgacttagcccgtcaaagtcaggtttattgttgccaaaaacttgtaatacttcttcccttgcacgttcttgccaatcaggg |
30424960 |
T |
|
| Q |
540 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
639 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| | |||||||||||| | |||||||||||||| |
|
|
| T |
30424959 |
tacctactcaacaacaccattgtccaaacaagcaaaacagaagtggtctcttggcctgcaaagtagaagagcttgcattcctctattacatcatcaagac |
30424860 |
T |
|
| Q |
640 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
739 |
Q |
| |
|
||||||| |||| ||| ||||| | | ||| || ||||| ||| |||||||||| | ||| || | |||||||||| | || ||| ||||||||||| |
|
|
| T |
30424859 |
tcattccaacattcttattgttgccgtgttcttccatttctttgtgatttgactctaaaagtatacctaataagtcatccttagtggcttcacctgcctt |
30424760 |
T |
|
| Q |
740 |
taatgctttctccctcttgttaatcatatctttaagcga |
778 |
Q |
| |
|
|| |||| | || |||||||||||||||||| ||||||| |
|
|
| T |
30424759 |
tagtgctctttctctcttgttaatcatatctgtaagcga |
30424721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 19 - 269
Target Start/End: Complemental strand, 30476618 - 30476368
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
30476618 |
tccaaatggaaaaaatgaaaatctcccatttgttgctttggaaattcctccagaaaatctctcaggattgaacaccttagcatcttcaccccatagttcg |
30476519 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
|||||||||||| ||||| || |||||| ||| | |||||| || |||| |||||| ||||||||||| |||||||| | | | |||||| ||| | |
|
|
| T |
30476518 |
gagtcatggtgaaccaaaactatcggtaaggtaatttgcactccggctggtaatgttaggtttccaagtttgacatctttgtgagtacttcgag-aagtc |
30476420 |
T |
|
| Q |
219 |
-caattacgggagggtataacctaagaacctcatacaaaatcatggtgacct |
269 |
Q |
| |
|
| ||| |||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30476419 |
gcgattgcgggtgggtataatctaagaacctcatacaaaatcatggtgacct |
30476368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 438 - 780
Target Start/End: Complemental strand, 30469160 - 30468818
Alignment:
| Q |
438 |
acaatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcag |
537 |
Q |
| |
|
||||||||||| ||||| || | | ||||||| |||||||| ||||| ||||||||||||| ||||| ||||| ||||| ||||| | ||||||||| | |
|
|
| T |
30469160 |
acaatacttacaatcttaagatgacttagcccgtcaaaatcaggtttattgttgccaaagacctgtaatacttcttcccttgcacgcgcttgccaatcgg |
30469061 |
T |
|
| Q |
538 |
ggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaag |
637 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| | |||||||||||| | ||||||||||| |
|
|
| T |
30469060 |
ggtacctactcaataacaccattgtccaaacaagcaaaacagaagtggtctcttggcctgcaaagtagaatagcttgcattcctctatcacatcatcaag |
30468961 |
T |
|
| Q |
638 |
actcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcc |
737 |
Q |
| |
|
||||||||| |||||||| ||||| ||| ||| || ||||| ||| |||||||||| | ||| || | || || |||| | || | | ||||||||| |
|
|
| T |
30468960 |
actcattccgacatccttattgttgccatgttcttccatttctttgtgatttgactctaaaagtatacctaacaaatcatccttagttgcttcacctgcc |
30468861 |
T |
|
| Q |
738 |
tttaatgctttctccctcttgttaatcatatctttaagcgaag |
780 |
Q |
| |
|
|||| |||| | || || ||||||||||||||| ||||||||| |
|
|
| T |
30468860 |
tttagtgctctttctctgttgttaatcatatctgtaagcgaag |
30468818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 971 - 1161
Target Start/End: Complemental strand, 30475415 - 30475225
Alignment:
| Q |
971 |
taagttcagcttgctctctttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttg |
1070 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||| |
|
|
| T |
30475415 |
taagttcagcttgctcgatttgaagttgaaatattctttttccctcttcataactacttccaaatgctgttctagaaataacatcactcgccaaattttg |
30475316 |
T |
|
| Q |
1071 |
cagggaaggccatatatctatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaacttatgaagaaa |
1161 |
Q |
| |
|
||| ||||||| | ||| | |||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||||| |||||||| |
|
|
| T |
30475315 |
aaggaaaggccaaacatccaattcacatgatccatctgatgacaacattctctcccatttggtaatcaaatcatcacaacttttgaagaaa |
30475225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 925 - 1161
Target Start/End: Original strand, 8380009 - 8380245
Alignment:
| Q |
925 |
tcttacatccataaagggatgatagatttcatgacaactttcactataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataac |
1024 |
Q |
| |
|
|||||| ||||||||||||| | |||||||| | | ||||| | ||||||| |||||||||||||||| | ||||||||||||||||||||| |||| |
|
|
| T |
8380009 |
tcttacctccataaagggattaaagatttcactagatttttcataacaagttcaccttgctctctttgaagatcaaatattctttttccttcttcgtaac |
8380108 |
T |
|
| Q |
1025 |
tacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcacatgatccatctgaagacaacattttctc |
1124 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| |||||| || |||||||||||||| |||||||||| |||||||||||| |||||| || ||| |
|
|
| T |
8380109 |
tacttccaaatgcgtttcgagaaataacatcacttgtcaaattctgtagggaaggccatatgtctatttcacctgatccatctgatgacaacgttgactc |
8380208 |
T |
|
| Q |
1125 |
ccatttgttaatcaaatcattgcaacttatgaagaaa |
1161 |
Q |
| |
|
||||||| |||||| |||| |||||||| ||| |||| |
|
|
| T |
8380209 |
ccatttgctaatcatatcaatgcaacttgtgaggaaa |
8380245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 30437666 - 30437406
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||| ||| ||| |||||||||| ||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
30437666 |
tccaaatggaacaaatgaatttcttccatttgttgctttcaaaacaccttcagaaaatctctcaggattgaacaccttagcatcgtcaccccatagttcg |
30437567 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
|||||||||||| |||| || |||||| ||| | |||||| ||||||| |||||| |||||||||||||||||||| | |||| |||||||||| |
|
|
| T |
30437566 |
gagtcatggtgaactaaaactatcggtaaggtaatttgcactccggcaggtaatgttaggtttccaagtttcacatctttgtgaacacttcgagcaagtt |
30437467 |
T |
|
| Q |
219 |
caattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaa |
279 |
Q |
| |
|
| ||||| || |||||||||||||||||||| ||||||||||| ||||||| || |||||| |
|
|
| T |
30437466 |
cgattactggtgggtataacctaagaacctcgtacaaaatcatcgtgacctgtctcaaaaa |
30437406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 441 - 769
Target Start/End: Complemental strand, 30484080 - 30483752
Alignment:
| Q |
441 |
atacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggt |
540 |
Q |
| |
|
|||||||| ||||| || | ||||| || ||||||||||||| | |||||||||| || |||| ||||||||| || ||||||| |||||||| ||||| |
|
|
| T |
30484080 |
atacttacaatcttaagatggtttagtccttcaaaatctggttgtttgttgccaaaaacttgtagcacttcctctcttgcacgtgcttgccaattagggt |
30483981 |
T |
|
| Q |
541 |
acctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagact |
640 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| || | || ||||||| || ||| | ||||||||||| || ||||||||||||| | |
|
|
| T |
30483980 |
gcctactcaataatacaattgtccaaacaagcaaaactgaagtggtttcttcccctgcaaggtagaatagcttgcattccttgattacatcatcaagatt |
30483881 |
T |
|
| Q |
641 |
cattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgccttt |
740 |
Q |
| |
|
|||||| |||| ||| ||||| | || || | |||||||||| ||||||||||||||||||| | |||||||||||| || ||| |||||||||||| |
|
|
| T |
30483880 |
cattccaacattcttattgttgttgttatctttaatttccttgtgatttgactcaagaagaatacctaataagtcattcttagtggcttcacctgccttt |
30483781 |
T |
|
| Q |
741 |
aatgctttctccctcttgttaatcatatc |
769 |
Q |
| |
|
| | || | || ||||||||||| ||||| |
|
|
| T |
30483780 |
atttctctttctctcttgttaataatatc |
30483752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 438 - 780
Target Start/End: Complemental strand, 30437349 - 30437007
Alignment:
| Q |
438 |
acaatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcag |
537 |
Q |
| |
|
||||||||||| ||||| || | | |||||||||||||||| ||||| |||||||||| || ||||| ||||||||||| ||||||| ||||||||||| |
|
|
| T |
30437349 |
acaatacttacaatcttaagatgacttagcccatcaaaatcgggtttattgttgccaaatacttgtaatacttcctcccttgcacgtgcttgccaatcag |
30437250 |
T |
|
| Q |
538 |
ggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaag |
637 |
Q |
| |
|
||||||||||||| || | |||||||||||||||||||| ||||| |||| | ||||||||||| ||| | |||||||||||| | |||||| ||||| |
|
|
| T |
30437249 |
ggtacctactcaacaacactattgtccaaacaagcaaaacagaagttgtctctgcacctgcaaagtagaatagcttgcattcctctattacatcgtcaag |
30437150 |
T |
|
| Q |
638 |
actcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcc |
737 |
Q |
| |
|
||||||||| |||| ||| ||||| |||| ||| || ||||| ||| |||||||||| | ||| || | || || |||| | | | | ||||||||| |
|
|
| T |
30437149 |
actcattccaacattcttattgttgtcatgttcttccatttctttgtgatttgactctaaaagtatacctaacaaatcatcctttgttgcttcacctgcc |
30437050 |
T |
|
| Q |
738 |
tttaatgctttctccctcttgttaatcatatctttaagcgaag |
780 |
Q |
| |
|
||| |||| |||| ||| |||||||||||||| ||||||||| |
|
|
| T |
30437049 |
attagtgctctctctctcgtgttaatcatatctgtaagcgaag |
30437007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 971 - 1152
Target Start/End: Complemental strand, 30436544 - 30436363
Alignment:
| Q |
971 |
taagttcagcttgctctctttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttg |
1070 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| || | |||||||||| |||||| ||||||||||| |
|
|
| T |
30436544 |
taagttcagcttgttcggtttgaagttgaaatattctttttccctcttcataactacttccaaacgctgctcgagaaataagatcactggccaaattttg |
30436445 |
T |
|
| Q |
1071 |
cagggaaggccatatatctatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaactt |
1152 |
Q |
| |
|
||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
30436444 |
aaggaaaggccatacgtccatttcacatgatccatctgacgacaacattttctcccatttgctaatcaaatcatcgcaactt |
30436363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 989 - 1152
Target Start/End: Complemental strand, 30424275 - 30424112
Alignment:
| Q |
989 |
tttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatc |
1088 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||| ||| ||||||||| || |
|
|
| T |
30424275 |
tttgaagttgaaatattctttttccctcttcataactacttccaaatgcagctcgagaaataacatcactcgccaaattttgaaggaaaggccatacgtc |
30424176 |
T |
|
| Q |
1089 |
tatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaactt |
1152 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
30424175 |
catttcacatgatccatctgaagccaacattttctcccatttgctaatcagatcatcgcaactt |
30424112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 971 - 1152
Target Start/End: Complemental strand, 30468286 - 30468105
Alignment:
| Q |
971 |
taagttcagcttgctctctttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttg |
1070 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| || | |||||||||| ||||||| || |||||||| |
|
|
| T |
30468286 |
taagttcagcttgttcggtttgaagttgaaatattctttttccctcttcataactacttccaaacgctgctcgagaaataacatcactggcaaaattttg |
30468187 |
T |
|
| Q |
1071 |
cagggaaggccatatatctatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaactt |
1152 |
Q |
| |
|
||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
30468186 |
aaggaaaggccatacgtccatttcacatgatccatctgacgacaacattttctcccatttgctaatcagatcatcgcaactt |
30468105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 971 - 1152
Target Start/End: Complemental strand, 30483018 - 30482837
Alignment:
| Q |
971 |
taagttcagcttgctctctttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttg |
1070 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| |||| ||||||| ||||||||||| |
|
|
| T |
30483018 |
taagttcagcttgctccttttgaagttgaaatatttttattccttcttcataactacttccaaatgctgttcgagcaataacatcactagccaaattttg |
30482919 |
T |
|
| Q |
1071 |
cagggaaggccatatatctatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaactt |
1152 |
Q |
| |
|
| ||||||||||| ||| |||||||||||||||||| | || |||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
30482918 |
aatggaaggccatacatcaatttcacatgatccatctaatgataacattccctcccatttgctaatcatatcattgcaactt |
30482837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 19 - 263
Target Start/End: Original strand, 23783369 - 23783613
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
|||||| |||||| |||||| ||| || |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
23783369 |
tccaaacggaaaatatgaaaatctaccgtttgttgctttggaaattccaccagaaaatctctcaggattgaaaatcttagcatcatcaccccatagttca |
23783468 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
|| |||||||||||||||| |||||| | | ||| ||||| ||||||| || ||| | | ||||||||| | ||| |||||||| |||||||||| || |
|
|
| T |
23783469 |
caatcatggtgaatcaaaacaattggcatgtaaacctccattccagcatataatgtcaagtctccaagttttatatcattctcaacttttcgagcaacgc |
23783568 |
T |
|
| Q |
219 |
caattacgggagggtataacctaagaacctcatacaaaatcatgg |
263 |
Q |
| |
|
| |||| |||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
23783569 |
cggttacaggagggtacaacctcaaaacctcatacaaaatcatgg |
23783613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 989 - 1144
Target Start/End: Complemental strand, 30430308 - 30430153
Alignment:
| Q |
989 |
tttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatc |
1088 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||| ||||| |||||||| ||| ||||||||| || |
|
|
| T |
30430308 |
tttgaagttgaaatattctttttccctcttcataactacttccaaatgcagctcgagaaataacatctcttgctaaattttgaaggaaaggccatacttc |
30430209 |
T |
|
| Q |
1089 |
tatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcat |
1144 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
30430208 |
catttcacatgatccatctgaagccaacattttctcccatttgctaatcagatcat |
30430153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 439 - 818
Target Start/End: Complemental strand, 30476121 - 30475742
Alignment:
| Q |
439 |
caatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagg |
538 |
Q |
| |
|
|||||||||| ||||| || | ||||| |||||||||||||||||| | ||||| ||||| || || ||||||||||| ||||| | |||||||||||| |
|
|
| T |
30476121 |
caatacttacaatcttaagttggtttagtccatcaaaatctggttttttattgccgaagacttgcaatacttcctcccttgcacgagcttgccaatcagg |
30476022 |
T |
|
| Q |
539 |
gtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaaga |
638 |
Q |
| |
|
||||||||||| || ||||||| ||||||||||||||| ||||| |||| ||| |||||||||| ||| | ||||||||| || | |||||| |||||| |
|
|
| T |
30476021 |
atacctactcaacaacatcattgcccaaacaagcaaaacagaagtggtctcttgccctgcaaagtagaatagcttgcattcttctattacatcgtcaaga |
30475922 |
T |
|
| Q |
639 |
ctcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcct |
738 |
Q |
| |
|
|||||||| |||||||| ||||| || | ||| || ||||| ||| |||| |||| | ||| || | ||||| |||| | || | | ||||| |||| |
|
|
| T |
30475921 |
ctcattccgacatccttattgttgtcgtgttcttccatttctttgtgattcaactccaaaagtatacctaataaatcatccttagttgcttcacccgcct |
30475822 |
T |
|
| Q |
739 |
ttaatgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcgattttattcatccttctatgg |
818 |
Q |
| |
|
||| ||| |||| ||||||||||||||||| |||| |||| |||||||| |||| |||| |||||||| |||||| |
|
|
| T |
30475821 |
ttagtgcgatctctctcttgttaatcatatcagtaagtgaagcttttatttctctgtcaatttccttcatcctcctatgg |
30475742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 440 - 662
Target Start/End: Original strand, 8379527 - 8379749
Alignment:
| Q |
440 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
539 |
Q |
| |
|
||||||||| ||||| || |||||||| || ||| | ||||||||| |||||||||| | ||||| ||||||||||| |||||| ||||||||||||| |
|
|
| T |
8379527 |
aatacttacaatcttaagtttatttagtccttcatagtctggttttttgttgccaaatatttgtaatacttcctccctagcacgttcttgccaatcaggg |
8379626 |
T |
|
| Q |
540 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
639 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| | |||||||| | ||| ||||| |||| ||| |||||||||||| | |||||||| ||||||| |
|
|
| T |
8379627 |
tacctactcaacaatatcattgtccaaacaagcatagttgaagtagattcttgccctgccaagtagaataacttgcattcccccactacatcttcaagac |
8379726 |
T |
|
| Q |
640 |
tcattcccacatccttgttgttt |
662 |
Q |
| |
|
||||||||| || |||||||||| |
|
|
| T |
8379727 |
tcattcccatattcttgttgttt |
8379749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 925 - 1177
Target Start/End: Original strand, 23784191 - 23784443
Alignment:
| Q |
925 |
tcttacatccataaagggatgatagatttcatgacaactttcactataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataac |
1024 |
Q |
| |
|
|||||| ||||||||||||| | ||||||||| | | ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||||| |
|
|
| T |
23784191 |
tcttacctccataaagggattaaagatttcattagatttttcattataagttcaccttgctctatttgaagttgaaatacttttcttccttcttcataac |
23784290 |
T |
|
| Q |
1025 |
tacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcacatgatccatctgaagacaacattttctc |
1124 |
Q |
| |
|
|||||||||||| | |||| ||| ||||||||| ||| | || ||||||||||||| || |||||||||||||||| ||||||||||||||| || |
|
|
| T |
23784291 |
tacttccaaatgacgaacgagcgataacatcacttgtcaagctctgaagggaaggccatacgtccatttcacatgatccatttgaagacaacattttttc |
23784390 |
T |
|
| Q |
1125 |
ccatttgttaatcaaatcattgcaacttatgaagaaagccggggtcataatct |
1177 |
Q |
| |
|
||| ||| |||||||||||||||| ||| | ||||| | || |||||||||| |
|
|
| T |
23784391 |
ccaattgctaatcaaatcattgcagcttttcaagaatgttggtgtcataatct |
23784443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 440 - 778
Target Start/End: Complemental strand, 30431092 - 30430754
Alignment:
| Q |
440 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
539 |
Q |
| |
|
||||||||||||||| || | | ||||||| ||||| |||||||| |||||||||| || ||||| ||||| ||||| |||||| ||||||||| || |
|
|
| T |
30431092 |
aatacttacgatcttaagatgacttagcccgtcaaattctggtttattgttgccaaatacttgtaatacttcttcccttgcacgttcttgccaatctggt |
30430993 |
T |
|
| Q |
540 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
639 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| | |||||||||||| | |||||||||||||| |
|
|
| T |
30430992 |
tacctactcaacaacaccattgtccaaacaagcaaaacagaagtggtctcttgtcctgcaaagtagaagagcttgcattcctctattacatcatcaagac |
30430893 |
T |
|
| Q |
640 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
739 |
Q |
| |
|
||||||| |||| ||| ||||| | | ||| || ||||| || |||||||||| | ||| || | |||||||||| | || | | | |||||| || |
|
|
| T |
30430892 |
tcattccaacattcttattgttgccttgttcttccatttctttttgatttgactctaaaagtatacctaataagtcatccttagttgctttacctgcttt |
30430793 |
T |
|
| Q |
740 |
taatgctttctccctcttgttaatcatatctttaagcga |
778 |
Q |
| |
|
|| |||| | || ||||||||||| |||||| ||||||| |
|
|
| T |
30430792 |
tagtgctctttctctcttgttaattatatctgtaagcga |
30430754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 92; E-Value: 5e-44
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 23768713 - 23768470
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
|||||| |||||| |||||| ||| || |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
23768713 |
tccaaacggaaaatatgaaaatctaccgtttgttgctttggaaattccaccagaaaatctctcaggattgaaaatcttagcatcatcaccccatagttca |
23768614 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
|| |||||||||||||||| ||| || ||| ||| |||| ||||||| || ||| | | ||||||||| | ||| |||||||| ||||||| || || |
|
|
| T |
23768613 |
caatcatggtgaatcaaaacaatcggcaagtaaacatccattccagcatataatgtcaagtctccaagttttatatcattctcaacttttcgagaaacgc |
23768514 |
T |
|
| Q |
219 |
caattacgggagggtataacctaagaacctcatacaaaatcatg |
262 |
Q |
| |
|
| ||| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
23768513 |
cggttataggagggtacaacctcaaaacctcatacaaaatcatg |
23768470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 19 - 269
Target Start/End: Complemental strand, 30425378 - 30425128
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||| ||| | |||||||| || |||||||||| ||||||||||||||||||||||| |
|
|
| T |
30425378 |
tccaaatggaaaaaatgaatttcttccatttgttgcttttaaaacaccttctgaaaatctctcgggattgaacaccttagcatcatcaccccatagttct |
30425279 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
||||||||||| ||||| || | |||||||| || |||||| || || | || ||| ||||||||| |||||||||| | |||| |||||||||| |
|
|
| T |
30425278 |
atgtcatggtgaaccaaaattatcgataagaaaacctgcactccggctggcaatgctaggtttccaagtatcacatctttgtgaacacttcgagcaagcg |
30425179 |
T |
|
| Q |
219 |
caattacgggagggtataacctaagaacctcatacaaaatcatggtgacct |
269 |
Q |
| |
|
| ||| | || |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30425178 |
cgattgctggtgggtataacctaagaacctcgtacaaaatcatagtgacct |
30425128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 21 - 279
Target Start/End: Complemental strand, 30469475 - 30469217
Alignment:
| Q |
21 |
caaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgca |
120 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||| ||| ||| |||||||||| || |||||||||| |||||||| |||||||||||||| |
|
|
| T |
30469475 |
caaatggaaaaaatgaatttcttccattggttgcttttaaaacaccttcagaaaatctctcgggattgaacaccttagcatcttcaccccatagttctat |
30469376 |
T |
|
| Q |
121 |
gtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggcca |
220 |
Q |
| |
|
||||||||||| || || || | |||||||| || |||||| || || | || ||| ||||||||||| |||||||| | ||| |||||||||| | |
|
|
| T |
30469375 |
gtcatggtgaaccataattatcgataagaaaacctgcactccggctggcaatgctaggtttccaagtttaacatctttgtgaactcttcgagcaagtgcg |
30469276 |
T |
|
| Q |
221 |
attacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaa |
279 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
30469275 |
attactggtgggtataacctaagaacctcatacaaaatcatggtgacctgtctcaaaaa |
30469217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 925 - 1177
Target Start/End: Complemental strand, 23767888 - 23767636
Alignment:
| Q |
925 |
tcttacatccataaagggatgatagatttcatgacaactttcactataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataac |
1024 |
Q |
| |
|
|||||| ||||||||||||| | ||||||||| | | ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||||| |
|
|
| T |
23767888 |
tcttacctccataaagggattaaagatttcattagatttttcattataagttcaccttgctctatttgaagttgaaatacttttcttccttcttcataac |
23767789 |
T |
|
| Q |
1025 |
tacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcacatgatccatctgaagacaacattttctc |
1124 |
Q |
| |
|
|||||||||||| | |||| ||| ||||||||| ||| | || |||||||||||||| ||||||||| | ||||||| |||||||||| ||| || |
|
|
| T |
23767788 |
tacttccaaatgacgaacgagcgataacatcacttgtcaagctctgaagggaaggccatatgtctatttcagaggatccatttgaagacaacgtttcttc |
23767689 |
T |
|
| Q |
1125 |
ccatttgttaatcaaatcattgcaacttatgaagaaagccggggtcataatct |
1177 |
Q |
| |
|
||| ||| |||||||||| ||||| ||| | ||||| | || |||||||||| |
|
|
| T |
23767688 |
ccaattgctaatcaaatcgttgcagcttttcaagaatgttggtgtcataatct |
23767636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 440 - 768
Target Start/End: Complemental strand, 23768360 - 23768032
Alignment:
| Q |
440 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
539 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||||| ||||||||| |||||||| | | ||| ||||||| || |||||| ||||||||| ||| |
|
|
| T |
23768360 |
aatacttacaatcttaagtttatttagtccatcaaagtctggtttttcattgccaaatatctctaatacttccttccgggcacgttcttgccaatctggg |
23768261 |
T |
|
| Q |
540 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
639 |
Q |
| |
|
| ||||||||| || | ||| ||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |||||||| ||||||| || ||||||| |
|
|
| T |
23768260 |
tgcctactcaacaacaccatcgtccaaacaagcaaatctgaagtagtctcttgccctgcaatatggaataacatgcattccccgactacttcttcaagac |
23768161 |
T |
|
| Q |
640 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
739 |
Q |
| |
|
||| ||||| || |||| |||| ||| ||| | |||||| ||| | || ||||| || || | | |||||||||||| | ||| ||||||||||| |
|
|
| T |
23768160 |
tcaatcccatattcttgaagtttccatgttctttaatttctttgtggttcgactctaggaggagacctaataagtcattctcagtggcttcacctgcctt |
23768061 |
T |
|
| Q |
740 |
taatgctttctccctcttgttaatcatat |
768 |
Q |
| |
|
|| ||||||||||||||||||||| |||| |
|
|
| T |
23768060 |
tattgctttctccctcttgttaattatat |
23768032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 440 - 768
Target Start/End: Original strand, 23783711 - 23784039
Alignment:
| Q |
440 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
539 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||||| || |||||| |||||||| | | ||| ||||||| ||| |||||| ||||||||||||| |
|
|
| T |
23783711 |
aatacttacaatcttaagtttatttagtccatcaaagtcgggtttttcattgccaaatatctctaatacttccttccttgcacgttcttgccaatcaggg |
23783810 |
T |
|
| Q |
540 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
639 |
Q |
| |
|
||||||||||| || | ||| ||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |||||||| ||||||| || ||||||| |
|
|
| T |
23783811 |
tacctactcaacaacaccatcgtccaaacaagcaaatctgaagtagtctcttgccctgcaacatggaataacctgcattccccgactacttcttcaagac |
23783910 |
T |
|
| Q |
640 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
739 |
Q |
| |
|
||| ||||| || |||| |||| ||| ||| | |||||| || | || ||||| || || | | |||||||||||| | ||| ||||||||||| |
|
|
| T |
23783911 |
tcaatcccatattcttgacgtttccatgttctttaatttctctgtggttcgactctaggaggagacctaataagtcattctcagtggcttcacctgcctt |
23784010 |
T |
|
| Q |
740 |
taatgctttctccctcttgttaatcatat |
768 |
Q |
| |
|
| |||||| |||||||||||||| |||| |
|
|
| T |
23784011 |
aattgctttttccctcttgttaattatat |
23784039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 21 - 269
Target Start/End: Complemental strand, 30431409 - 30431161
Alignment:
| Q |
21 |
caaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgca |
120 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||| ||| | |||||||| || |||||||||| |||||||| |||||||||||||| |
|
|
| T |
30431409 |
caaatggaataaatgaatttcttccatttgttgcttttaaaacaccttctgaaaatctctcgggattgaacaccttagcatcttcaccccatagttctat |
30431310 |
T |
|
| Q |
121 |
gtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggcca |
220 |
Q |
| |
|
||||||||||| ||||| || | |||||||| || |||||| ||||||| |||||| ||||||||| ||| |||||| | | || |||||| ||| | |
|
|
| T |
30431309 |
gtcatggtgaaccaaaattatcgataagaaaacctgcactcctgcaggtaatgttaggtttccaagtgtcatatctttgtgatcacttcgagtaagcgcg |
30431210 |
T |
|
| Q |
221 |
attacgggagggtataacctaagaacctcatacaaaatcatggtgacct |
269 |
Q |
| |
|
||| | || |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30431209 |
atttctggtgggtataacctaagaacctcgtacaaaatcatagtgacct |
30431161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 19 - 283
Target Start/End: Original strand, 8379013 - 8379277
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
||||||||||||| || || ||| |||||||||||||||||||||||| ||| |||||| |||||||||||||| || |||||||||||||||||||| |
|
|
| T |
8379013 |
tccaaatggaaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcaccccatagttca |
8379112 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
|| ||| |||| ||||| |||||||||||||| |||||||||||||||| | | ||||||| || | ||||| |||||| ||||| || | |
|
|
| T |
8379113 |
ttgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggtacttccatgtttccaaactttatgtctttgccaacatatcgagtaacac |
8379212 |
T |
|
| Q |
219 |
caattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagatt |
283 |
Q |
| |
|
||| | | || || || ||||| |||||||||||||||||||| | || || ||||||||||||| |
|
|
| T |
8379213 |
caaatgctggtggatacaaccttagaacctcatacaaaatcatagggagctgtcacaaaaagatt |
8379277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 925 - 1177
Target Start/End: Complemental strand, 23797057 - 23796805
Alignment:
| Q |
925 |
tcttacatccataaagggatgatagatttcatgacaactttcactataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataac |
1024 |
Q |
| |
|
|||||| ||||||||||||| | ||||||||| | | ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||||| |
|
|
| T |
23797057 |
tcttacctccataaagggattaaagatttcattagatttttcattataagttcaccttgctctatttgaagttgaaatacttttcttccttcttcataac |
23796958 |
T |
|
| Q |
1025 |
tacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatttcacatgatccatctgaagacaacattttctc |
1124 |
Q |
| |
|
|||||||||||| | |||| ||| ||||||||| ||| | || |||||||||||||| ||||||||| | | |||| |||||||||| ||| || |
|
|
| T |
23796957 |
tacttccaaatgacgaacgagcgataacatcacttgtcaagctctgaagggaaggccatatgtctatttcagaggctccacttgaagacaacgtttcttc |
23796858 |
T |
|
| Q |
1125 |
ccatttgttaatcaaatcattgcaacttatgaagaaagccggggtcataatct |
1177 |
Q |
| |
|
||| ||| |||||||||| ||||| ||| | ||||| | || |||||||||| |
|
|
| T |
23796857 |
ccaattgctaatcaaatcgttgcagcttttcaagaatgttggtgtcataatct |
23796805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 19 - 283
Target Start/End: Complemental strand, 30484796 - 30484532
Alignment:
| Q |
19 |
tccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcg |
118 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||| |||| |||| | | |||||| ||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
30484796 |
tccaaatggaaaaaatgaatttctaccatttgttgcttttgaaactccttctgcaaatctctcaggattgaacaccttagcatcttcaccccatagttca |
30484697 |
T |
|
| Q |
119 |
cagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc |
218 |
Q |
| |
|
|| ||||||||| ||| ||||||||| ||||| ||||| ||||||| |||||| ||||||| ||| || ||||| | || ||||| ||| |
|
|
| T |
30484696 |
tggttgtggtgaatccaaactattggtaaggtaatctggactccggcaggtaatgttaggtttccaacttttacgtctttgtgaatggctcgaggaagca |
30484597 |
T |
|
| Q |
219 |
caattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagatt |
283 |
Q |
| |
|
| ||| || ||||||||||| ||||||||||||||||||||||| | || ||||||||||||| |
|
|
| T |
30484596 |
cggttattggtgggtataaccttagaacctcatacaaaatcatggtcatctgtcacaaaaagatt |
30484532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1266 - 1332
Target Start/End: Complemental strand, 30393977 - 30393911
Alignment:
| Q |
1266 |
actaaccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
30393977 |
actaaccttcaattgttctaaatggaaagcagggttgattagccttctatgcttgctccatttttct |
30393911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1266 - 1331
Target Start/End: Complemental strand, 30482222 - 30482157
Alignment:
| Q |
1266 |
actaaccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttc |
1331 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
30482222 |
actaaccttcaatttttctaaatggaatgcaggatttattatctttctatgcttgctccacttttc |
30482157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 507 - 580
Target Start/End: Complemental strand, 30403983 - 30403910
Alignment:
| Q |
507 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactga |
580 |
Q |
| |
|
|||||||| || || |||| |||||||||||| || |||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
30403983 |
acttcctctctagctcgtgcttgccaatcaggatatctactcaacaatatcattgtccaaacaagcagaactga |
30403910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1271 - 1332
Target Start/End: Complemental strand, 30423933 - 30423872
Alignment:
| Q |
1271 |
ccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| | |||||| ||||||||||||| |||| |
|
|
| T |
30423933 |
ccttcaatttttctaaatggaatgcagggttgataatctttctgtgcttgctccactgttct |
30423872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1271 - 1332
Target Start/End: Complemental strand, 30467927 - 30467866
Alignment:
| Q |
1271 |
ccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||||| |||||| ||||||||||||| |||| |
|
|
| T |
30467927 |
ccttcaatttttctaaatggaatgcaggattgattatctttctgtgcttgctccactgttct |
30467866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1268 - 1332
Target Start/End: Original strand, 8381668 - 8381732
Alignment:
| Q |
1268 |
taaccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
|||||||||| |||||||| |||||||||| ||| |||| | |||||||||| |||||||||||| |
|
|
| T |
8381668 |
taaccttcaatttttctaactggaaagcagcgttcattaaccttctatgctttctccacttttct |
8381732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1270 - 1332
Target Start/End: Complemental strand, 30436138 - 30436076
Alignment:
| Q |
1270 |
accttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
|||||||| |||||||||||||| ||||| || |||| |||||| ||||||||||||| |||| |
|
|
| T |
30436138 |
accttcaatttttctaaatggaatgcaggatttattatctttctgtgcttgctccactgttct |
30436076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1271 - 1332
Target Start/End: Complemental strand, 30429966 - 30429905
Alignment:
| Q |
1271 |
ccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
||||||| ||||||| |||||| ||||||||||| | |||||| ||||||||||||| |||| |
|
|
| T |
30429966 |
ccttcaatttttctacatggaatgcagggttgataatctttctgtgcttgctccactgttct |
30429905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1268 - 1332
Target Start/End: Complemental strand, 23767352 - 23767288
Alignment:
| Q |
1268 |
taaccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
|||||||||| ||||| | || |||||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
23767352 |
taaccttcaatttttccatgtgaaaagcagggttgattatccttctatgcttggtccacttttct |
23767288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 142; Significance: 7e-74; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 18 - 279
Target Start/End: Original strand, 41626861 - 41627122
Alignment:
| Q |
18 |
atccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttc |
117 |
Q |
| |
|
||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
41626861 |
atccaaatggaaaaaatgaaactctaccgttcgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccataattc |
41626960 |
T |
|
| Q |
118 |
gcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaagg |
217 |
Q |
| |
|
|| |||||||| | ||| | |||||| | ||||| |||||||||||||| || |||||| |||||||||||||||| ||| ||||| ||||| | ||| |
|
|
| T |
41626961 |
acaatcatggtgcaacaatataattggcatgaaaacctccactccagcagataatgttaggtttccaagtttcacatttttttcaacgtttcgcgaaagc |
41627060 |
T |
|
| Q |
218 |
ccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaa |
279 |
Q |
| |
|
|||||| |||||| ||||| || | ||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
41627061 |
tcaattatgggaggatataatctcataacctcatacaaaatcatggtaacctatgacaaaaa |
41627122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 970 - 1162
Target Start/End: Original strand, 41628321 - 41628513
Alignment:
| Q |
970 |
ataagttcagcttgctctctttgaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaatttt |
1069 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||| |||||||| | |
|
|
| T |
41628321 |
ataagttcagcttgctcaatttgaagttgaaatattcttcttccttcttcataactacttccgaatgttgttcgagaaataacatcactcgccaaattct |
41628420 |
T |
|
| Q |
1070 |
gcagggaaggccatatatctatttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaacttatgaagaaag |
1162 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||||||||| ||||||||| |
|
|
| T |
41628421 |
gaagggaaggccatatatctatttcacatgatccatctggagacaacatttcctcccattttctaattaaatcgttgcaacttgtgaagaaag |
41628513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 441 - 852
Target Start/End: Original strand, 41627756 - 41628167
Alignment:
| Q |
441 |
atacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggt |
540 |
Q |
| |
|
|||||||| ||||| | |||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||| || | || |||||| ||||||| |
|
|
| T |
41627756 |
atacttacaatcttcaagttatttagcccatcaaaattaggttttttgttgccaaagatttgtaatacttcctcccttgcccttgcttgccactcagggt |
41627855 |
T |
|
| Q |
541 |
acctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagact |
640 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||| ||||||||||| ||| |||||||||| ||||||||||||||||| | |||||| |||| | | |
|
|
| T |
41627856 |
acctactcaataataccattgtccaaacaagtaaagttgaagtagtctcttgccctgcaaagtagaacaacttgcattcctgaattacatcttcaatatt |
41627955 |
T |
|
| Q |
641 |
cattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgccttt |
740 |
Q |
| |
|
||||||||||| | ||||||| ||| ||| | |||||||||| | |||| ||| | |||||| | ||||| |||||| || | ||||| ||||| |
|
|
| T |
41627956 |
cattcccacattcacgttgtttccatgttctttaatttccttgtggtttgtctctataagaatacctaataaatcattcttattttctccaccttccttt |
41628055 |
T |
|
| Q |
741 |
aatgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcgattttattcatccttctatggacaattgtaggtaaaaacctac |
840 |
Q |
| |
|
||| |||| |||| ||||| |||||||| ||||| ||||| |||| ||||| | |||| ||| ||||| |||| ||| || ||||||| |||||| | |
|
|
| T |
41628056 |
aatattttcacccttttgttgatcatatccttaagtgaagattttatatctttcccaatttcattaatcctcctattgaccatagtaggtacaaacctgc |
41628155 |
T |
|
| Q |
841 |
aaacaaaaatgt |
852 |
Q |
| |
|
||| ||| |||| |
|
|
| T |
41628156 |
aaataaacatgt |
41628167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1268 - 1332
Target Start/End: Original strand, 41628725 - 41628789
Alignment:
| Q |
1268 |
taaccttcaacttttctaaatggaaagcagggttgattagctttctatgcttgctccacttttct |
1332 |
Q |
| |
|
|||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41628725 |
taaccttcaatttttctgaatggaaagcggggttgattagccttctatgcttgctccacttttct |
41628789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.00000003; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 15844625 - 15844676
Alignment:
| Q |
220 |
aattacgggagggtataacctaagaacctcatacaaaatcatggtgacctat |
271 |
Q |
| |
|
|||||| |||||||||||||| || ||||| |||||||||||||| |||||| |
|
|
| T |
15844625 |
aattacaggagggtataaccttagtacctcgtacaaaatcatggtaacctat |
15844676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 992 - 1151
Target Start/End: Original strand, 15846083 - 15846242
Alignment:
| Q |
992 |
gaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctat |
1091 |
Q |
| |
|
|||||||||||||| || ||||||| |||| || ||||||||||| |||| |||||| |||||| | |||||| || ||| ||||||| | ||| | |
|
|
| T |
15846083 |
gaagttgaaatatttttgctccttctgcatagctgcttccaaatgctgttctagaaattacatcacaggtcaaattctgaaggaaaggccaaacatcaag |
15846182 |
T |
|
| Q |
1092 |
ttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaact |
1151 |
Q |
| |
|
||||||| ||||||||| ||||| | | || ||||||| | |||| ||||||||||| |
|
|
| T |
15846183 |
ctcacatgttccatctgatgacaataatcccttccatttgcttatcatttcattgcaact |
15846242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 992 - 1151
Target Start/End: Original strand, 15860272 - 15860431
Alignment:
| Q |
992 |
gaagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctat |
1091 |
Q |
| |
|
|||||||||||| | || |||||||| | || || ||||||||||| || |||||||| |||||| | ||||| || ||||||||||| | ||| || |
|
|
| T |
15860272 |
gaagttgaaatagttttgttccttctgcgtagctgcttccaaatgctgtccgagaaattacatcacaggtaaaattctgaagggaaggccaaacatcaat |
15860371 |
T |
|
| Q |
1092 |
ttcacatgatccatctgaagacaacattttctcccatttgttaatcaaatcattgcaact |
1151 |
Q |
| |
|
||||||| ||||||||| ||||| | | || ||||||| | |||| ||||||||||| |
|
|
| T |
15860372 |
ctcacatgttccatctgatgacaataatcccttccatttgcttatcatttcattgcaact |
15860431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 993 - 1115
Target Start/End: Original strand, 15852912 - 15853034
Alignment:
| Q |
993 |
aagttgaaatattctttttccttcttcataactacttccaaatgcggttcgagaaatagcatcacttgccaaattttgcagggaaggccatatatctatt |
1092 |
Q |
| |
|
||||||||||| | || |||||||| | || || ||||||||||| || |||||||| |||||| | |||||| || ||| ||||||| | ||| || |
|
|
| T |
15852912 |
aagttgaaatagttttgttccttctgcgtagctgcttccaaatgctgtccgagaaattacatcacacgtcaaattctgaaggaaaggccaaacatcaatc |
15853011 |
T |
|
| Q |
1093 |
tcacatgatccatctgaagacaa |
1115 |
Q |
| |
|
||||||| ||||||||| ||||| |
|
|
| T |
15853012 |
tcacatgttccatctgatgacaa |
15853034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 15851701 - 15851754
Alignment:
| Q |
61 |
aattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatag |
114 |
Q |
| |
|
||||||| ||||||| | ||||||||||||| | || ||||||||||||||||| |
|
|
| T |
15851701 |
aattccttcagaaaaccgttcaggattgaacttctttgcatcatcaccccatag |
15851754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 507 - 624
Target Start/End: Original strand, 15852326 - 15852443
Alignment:
| Q |
507 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtgga |
606 |
Q |
| |
|
||||||| ||| |||||| |||||| ||||| ||||| | ||||| | |||||||||||| |||||| |||||| |||| ||| ||||| |||| | |
|
|
| T |
15852326 |
acttcctgccttgcacgttcttgccattcaggatacctgcctaataacaccattgtccaaaccagcaaacttgaagtggtctcttgccctgccaagtaaa |
15852425 |
T |
|
| Q |
607 |
acaacttgcattcctcga |
624 |
Q |
| |
|
|||| |||||||| |||| |
|
|
| T |
15852426 |
acaatttgcattcatcga |
15852443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 989 - 1034
Target Start/End: Complemental strand, 11018132 - 11018087
Alignment:
| Q |
989 |
tttgaagttgaaatattctttttccttcttcataactacttccaaa |
1034 |
Q |
| |
|
||||||||||||| | |||||||||||||||| | ||||||||||| |
|
|
| T |
11018132 |
tttgaagttgaaaaactctttttccttcttcaaagctacttccaaa |
11018087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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