View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3502_low_7 (Length: 368)

Name: NF3502_low_7
Description: NF3502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3502_low_7
NF3502_low_7
[»] chr3 (15 HSPs)
chr3 (25-349)||(36037141-36037469)
chr3 (256-338)||(30158450-30158534)
chr3 (250-338)||(9154440-9154528)
chr3 (267-349)||(17532031-17532113)
chr3 (250-324)||(25888820-25888893)
chr3 (250-341)||(42354816-42354907)
chr3 (255-335)||(2280028-2280108)
chr3 (267-334)||(10106995-10107062)
chr3 (278-330)||(55032259-55032311)
chr3 (20-213)||(18551416-18551613)
chr3 (267-347)||(10884575-10884655)
chr3 (126-194)||(3305616-3305684)
chr3 (267-335)||(9392465-9392533)
chr3 (126-194)||(28327210-28327278)
chr3 (126-194)||(28330535-28330603)
[»] chr6 (16 HSPs)
chr6 (19-291)||(16731042-16731318)
chr6 (18-291)||(20189603-20189882)
chr6 (18-291)||(22146109-22146388)
chr6 (179-291)||(28117510-28117621)
chr6 (179-285)||(9314122-9314227)
chr6 (179-291)||(22464085-22464196)
chr6 (267-349)||(23388510-23388592)
chr6 (267-347)||(5738495-5738575)
chr6 (267-349)||(9953598-9953680)
chr6 (250-325)||(31262417-31262492)
chr6 (250-347)||(14969281-14969380)
chr6 (280-347)||(11410379-11410446)
chr6 (267-338)||(28848483-28848554)
chr6 (265-338)||(23007805-23007879)
chr6 (265-338)||(23780485-23780559)
chr6 (126-194)||(28894765-28894833)
[»] chr4 (17 HSPs)
chr4 (68-295)||(24605440-24605665)
chr4 (19-269)||(7395044-7395279)
chr4 (272-347)||(37103631-37103706)
chr4 (267-347)||(27013894-27013974)
chr4 (267-338)||(5670202-5670273)
chr4 (262-341)||(11703004-11703083)
chr4 (78-130)||(24605386-24605438)
chr4 (267-338)||(5672521-5672592)
chr4 (276-333)||(12237917-12237974)
chr4 (250-338)||(18859399-18859489)
chr4 (268-335)||(33400744-33400810)
chr4 (301-347)||(40617139-40617185)
chr4 (267-338)||(49270363-49270435)
chr4 (300-347)||(19864930-19864977)
chr4 (301-347)||(5681060-5681106)
chr4 (126-194)||(15850939-15851007)
chr4 (126-194)||(26703775-26703843)
[»] chr7 (16 HSPs)
chr7 (19-194)||(26808903-26809082)
chr7 (103-207)||(6214516-6214620)
chr7 (250-347)||(11825763-11825862)
chr7 (179-275)||(22083779-22083875)
chr7 (204-286)||(6215033-6215115)
chr7 (250-341)||(22256878-22256970)
chr7 (250-340)||(22233039-22233130)
chr7 (250-340)||(22253609-22253700)
chr7 (250-347)||(8397471-8397569)
chr7 (301-347)||(8276621-8276667)
chr7 (267-347)||(10431936-10432016)
chr7 (288-328)||(36843638-36843678)
chr7 (250-347)||(23467493-23467589)
chr7 (275-347)||(26557118-26557191)
chr7 (126-194)||(43548959-43549027)
chr7 (126-194)||(44018076-44018144)
[»] chr8 (17 HSPs)
chr8 (19-221)||(587056-587258)
chr8 (19-221)||(626664-626866)
chr8 (256-347)||(5963868-5963961)
chr8 (267-349)||(18721692-18721774)
chr8 (273-349)||(25591890-25591966)
chr8 (267-349)||(23613167-23613249)
chr8 (267-349)||(25595068-25595150)
chr8 (288-347)||(18696372-18696431)
chr8 (280-338)||(452776-452834)
chr8 (300-349)||(31984608-31984657)
chr8 (277-347)||(45155691-45155761)
chr8 (126-199)||(9466889-9466962)
chr8 (267-327)||(10663547-10663608)
chr8 (268-332)||(30645103-30645167)
chr8 (262-349)||(31980973-31981059)
chr8 (126-194)||(13331855-13331923)
chr8 (126-194)||(39660241-39660309)
[»] chr5 (15 HSPs)
chr5 (82-194)||(35432716-35432828)
chr5 (179-291)||(17944320-17944432)
chr5 (250-347)||(26547705-26547804)
chr5 (250-347)||(26551264-26551363)
chr5 (250-335)||(3194825-3194911)
chr5 (267-347)||(22937348-22937428)
chr5 (267-347)||(28441545-28441625)
chr5 (262-335)||(34653171-34653245)
chr5 (277-338)||(21333102-21333163)
chr5 (277-338)||(21336118-21336179)
chr5 (278-335)||(14376231-14376288)
chr5 (126-198)||(33321208-33321280)
chr5 (267-327)||(43491408-43491468)
chr5 (250-347)||(2452953-2453049)
chr5 (277-330)||(32837669-32837722)
[»] chr2 (15 HSPs)
chr2 (179-275)||(30719462-30719558)
chr2 (250-341)||(1507042-1507132)
chr2 (272-349)||(26365544-26365621)
chr2 (250-341)||(1503838-1503928)
chr2 (250-347)||(4577466-4577563)
chr2 (288-347)||(15704416-15704475)
chr2 (288-347)||(15719670-15719729)
chr2 (280-347)||(29435365-29435432)
chr2 (277-347)||(38005604-38005674)
chr2 (250-335)||(38325995-38326081)
chr2 (250-335)||(38326678-38326764)
chr2 (267-327)||(29440157-29440217)
chr2 (277-347)||(10600578-10600648)
chr2 (267-349)||(25139344-25139425)
chr2 (126-194)||(40678056-40678124)
[»] scaffold0134 (1 HSPs)
scaffold0134 (179-291)||(6908-7019)
[»] chr1 (7 HSPs)
chr1 (262-338)||(37641488-37641566)
chr1 (280-347)||(49715985-49716052)
chr1 (280-347)||(49719468-49719535)
chr1 (267-347)||(1950865-1950945)
chr1 (267-327)||(2793881-2793941)
chr1 (126-194)||(23441568-23441636)
chr1 (126-194)||(33898092-33898160)
[»] scaffold0214 (3 HSPs)
scaffold0214 (250-347)||(13222-13319)
scaffold0214 (250-347)||(27238-27335)
scaffold0214 (250-347)||(19672-19769)
[»] scaffold0381 (1 HSPs)
scaffold0381 (267-347)||(5810-5890)
[»] scaffold0035 (1 HSPs)
scaffold0035 (267-347)||(62148-62228)
[»] scaffold0360 (1 HSPs)
scaffold0360 (262-347)||(2095-2180)
[»] scaffold0062 (2 HSPs)
scaffold0062 (288-347)||(53328-53387)
scaffold0062 (288-347)||(68227-68286)
[»] scaffold0014 (1 HSPs)
scaffold0014 (300-349)||(226966-227015)
[»] scaffold0080 (1 HSPs)
scaffold0080 (267-349)||(26818-26900)


Alignment Details
Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 25 - 349
Target Start/End: Original strand, 36037141 - 36037469
Alignment:
Q  25 tcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattcaagcaa 120  Q
    ||||||||||||||||||    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36037141 tcctatctctagtttcatatgttgagttaatcacaattactatgtccggttcattagctaggattagtaatcaattgtaacctaaattcaattcaagcaa 36037240  T
Q  121 tcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataacaataga 220  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037241 tcgatagaagctagtgttaataatcatacacacgatattatgaaaagcattaagcaagaataattatgaataaatactgaattatattgataacaataga 36037340  T
Q  221 gtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaaga 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037341 gtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaaga 36037440  T
Q  321 aaataaaccgatagagtttcgacgttgtc 349  Q
    ||||||| |||||||||||||||||||||    
T  36037441 aaataaatcgatagagtttcgacgttgtc 36037469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 30158450 - 30158534
Alignment:
Q  256 tcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    ||||| ||||||||||||  ||||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||    
T  30158450 tcatcatggcttaatcaataaggaaattagctagacatgatcaaacgaataaacaacataataaagaaaataaaccgatagagtt 30158534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 9154528 - 9154440
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||||||| |||  |||||||||||| |||| ||||||||| |||| ||||    
T  9154528 ataggttcatcatggctcaatcaaagggaattagctagacatgattaaatacataaacaacatagtaaaaaaaataaacagataaagtt 9154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 17532031 - 17532113
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    ||||||||| |||||||||| |||||||| ||  ||||| ||||||| ||||||||||||| ||| |||||| || |||||||    
T  17532031 taatcaaagaaaattagctagacatgattaaagcaataagcaacatagtaaagaaaataaagcgaaagagttccgtcgttgtc 17532113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 25888820 - 25888893
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaat 324  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||| || |||||||||||||| |||| |||||    
T  25888820 atagattcatcatggcttaatcaaaagaa-ttagctagacatgattaaaggaataaacaacatagtaaaaaaaat 25888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 42354816 - 42354907
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaa-taaaccgatagagtttcg 341  Q
    |||| |||||| || || ||||||||||| ||||||| |||||||| ||| || |||||||||| |||| |||| ||||||||||||||||||    
T  42354816 ataggttcatcatgactcaatcaaaggaa-ttagctagacatgattaaataaagaaacaacatagtaaaaaaaaataaaccgatagagtttcg 42354907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 2280028 - 2280108
Alignment:
Q  255 ttcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgataga 335  Q
    |||||| ||||| ||||| | ||||||||||| |||||| | ||  || |||||||||  |||||||||||||||||||||    
T  2280028 ttcatcatggctcaatcatatgaaattagctagacatgaataaagaaacaaacaacattgtaaagaaaataaaccgataga 2280108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 10106995 - 10107062
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaat-aaacaacataataaagaaaataaaccgatag 334  Q
    |||||||||||||||||||| |||| || ||| |||| |||||||||| ||||||||||||||| ||||    
T  10106995 taatcaaaggaaattagctagacataat-caaagaattaaacaacatagtaaagaaaataaaccaatag 10107062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 55032259 - 55032311
Alignment:
Q  278 aattagctacacatgattcaatgaataaacaacataataaagaaaataaaccg 330  Q
    ||||||||| |||||||  || |||||||||||||| ||||||||||||||||    
T  55032259 aattagctagacatgataaaaggaataaacaacatagtaaagaaaataaaccg 55032311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 18551613 - 18551416
Alignment:
Q  20 caacttcctatctctagtttcat-tg---agttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattca 115  Q
    ||||||||||||||||||||||| ||   |||  | || ||| ||||| || |||| ||||||||||||||||| ||||||    |||||  |||||| |    
T  18551613 caacttcctatctctagtttcatatgtaaagtcaaacagaatcactatttcaggtttaatagctagggttagtagtcaattaactcctaagatcaattaa 18551514  T
Q  116 agcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataa 213  Q
      |||| || ||||| ||| |||| ||| |||||| || ||  |||||||| || |||||| | |||||| |||||||| |||||||  |||||||||    
T  18551513 tacaattgaaagaagctagggttagtagccatacaaacaatcataagaaaatcaataagcatgtataattctgaataaagactgaatgttattgataa 18551416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 10884655 - 10884575
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaat-aaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||| ||| |||| || ||| |||| |||||||||| ||||||||||||||| ||| |||| || |||||    
T  10884655 taatcaaaggaaattaactaaacataat-caaagaattaaacaacatagtaaagaaaataaaccaataaagttccgtcgttg 10884575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 3305684 - 3305616
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  3305684 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 3305616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 9392533 - 9392465
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgataga 335  Q
    |||||||| |||| |||||| |||||||  ||| |  |||||||||||  |||||||||||||||||||    
T  9392533 taatcaaaagaaactagctagacatgatcaaataagcaaacaacataaagaagaaaataaaccgataga 9392465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 28327278 - 28327210
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  28327278 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 28327210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 28330603 - 28330535
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  28330603 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 28330535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 184; Significance: 2e-99; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 16731318 - 16731042
Alignment:
Q  19 tcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattc 114  Q
    ||||||||||||||||||||||||    |||||| |||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  16731318 tcaacttcctatctctagtttcatatgttgagttaatcataattactatgtccgattcaatagctagggttagtagtcaattgaaacctaaattcaattc 16731219  T
Q  115 aagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataac 214  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||| |    
T  16731218 aagcaattgatagaagctagtgttaatagtcatacacacgatattaagaaaagcatcaagcaagaatagttatgaataaagactaaattatattgatagc 16731119  T
Q  215 aatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaaattagctacacat 291  Q
    || | |||||||| ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||    
T  16731118 aacaaagtcaaaaactacatagattcacagatacaatagattcaccttggcttaatcaaaggaaattagctagacat 16731042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 20189603 - 20189882
Alignment:
Q  18 atcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaatt 113  Q
    ||||| ||||||||| |||||||||    |||||| |||||||||| ||| |||  |||||| |||||||| |||| ||||||| |||||||||||||||    
T  20189603 atcaatttcctatctgtagtttcatatgttgagttaatcacaattattatatccaattcaattgctagggtaagtagtcaattgaaacctaaattcaatt 20189702  T
Q  114 caagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataa 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20189703 caagcaatcgatagaagttagtgttaatagtcatacacacgatattaagaaaagcattaagtaagaatacttatgaataaatactgaattatattgataa 20189802  T
Q  214 ca--atagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaaattagctacacat 291  Q
    ||  ||||||||||||| |   | |||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  20189803 caatatagagtcaaaagttgtgtggatttacagatacaatagattcatcttggcttaatcaaaggaaattagctagacat 20189882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 18 - 291
Target Start/End: Complemental strand, 22146388 - 22146109
Alignment:
Q  18 atcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaatt 113  Q
    ||||| ||||||||| |||||||||    |||||| |||||||||| ||| |||  |||||| |||||||| |||| ||||||| |||||||||||||||    
T  22146388 atcaatttcctatctgtagtttcatatgttgagttaatcacaattattatatccaattcaattgctagggtaagtagtcaattgaaacctaaattcaatt 22146289  T
Q  114 caagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataa 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22146288 caagcaatcgatagaagttagtgttaatagtcatacacacgatattaagaaaagcattaagtaagaatacttatgaataaatactgaattatattgataa 22146189  T
Q  214 ca--atagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaaattagctacacat 291  Q
    ||  ||||||||||||| |   | |||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  22146188 caatatagagtcaaaagttgtgtggatttacagatacaatagattcatcttggcttaatcaaaggaaattagctagacat 22146109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 28117621 - 28117510
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaa 278  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||||| |||    
T  28117621 aataattctgaataaagactgaattatattgataacaatagagtcaaaagctacgtgggttcacagatacaatagattcatcttgacttaatcaaa-gaa 28117523  T
Q  279 attagctacacat 291  Q
    |||||||| ||||    
T  28117522 attagctagacat 28117510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 9314122 - 9314227
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaa 278  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||||| |||    
T  9314122 aataattctgaataaagactgaattatattgataacaatagagtcaaaagctacgtgggttcacagatacaatagattcatcttgacttaatcaaa-gaa 9314220  T
Q  279 attagct 285  Q
    |||||||    
T  9314221 attagct 9314227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 22464196 - 22464085
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaa 278  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||||  | |||||||||| || |||||||||||||| |||||||||| |||    
T  22464196 aataattctgaataaaaactgaattttattgataacaatagagtcaaaagctatgtggattcacagatacaatagattcatcttgacttaatcaaa-gaa 22464098  T
Q  279 attagctacacat 291  Q
    |||||||| ||||    
T  22464097 attagctagacat 22464085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 23388510 - 23388592
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||||||||| ||||| || |||  |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  23388510 taatcaaaggaaattagctagacatggttaaatacataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgtc 23388592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 5738495 - 5738575
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||||||| |||||||| ||  ||||||||||||| |||||||||||||||||||||||| || |||||    
T  5738495 taatcaaaggaaattagctagacatgattaaaataataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 5738575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 9953680 - 9953598
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||||||||| ||||| || |||  ||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  9953680 taatcaaaggaaattagctagacatggttaaatacataaacaacataataaaaaaaataagccgatagagtttcgtcgttgtc 9953598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 31262492 - 31262417
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaata 325  Q
    |||||||||||||||||||||||||||||||||| || | |||||| ||  ||||||||||||| || ||||||||    
T  31262492 atagattcatcttggcttaatcaaaggaaattagttagatatgattaaagaaataaacaacatagtagagaaaata 31262417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 14969380 - 14969281
Alignment:
Q  250 atagattcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||||||||||  ||||||||||| | |||||||  || ||||||||||  ||||||| ||||||||| |||||||||||| |||||    
T  14969380 ataggttcatcatggcttaatcaacaaggaaattagcaagacatgatcaaacgaataaacaatttaataaaaaaaataaactgatagagtttcgtcgttg 14969281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 11410446 - 11410379
Alignment:
Q  280 ttagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  11410446 ttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 11410379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 28848554 - 28848483
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    |||||||||||||||| ||| |||||||  |||  |||||||||||| ||||||||||||| |||| |||||    
T  28848554 taatcaaaggaaattaactagacatgatcaaatacataaacaacatagtaaagaaaataaatcgatggagtt 28848483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 23007879 - 23007805
Alignment:
Q  265 cttaatcaaaggaaattagctacacatgattcaatgaataaacaacataat-aaagaaaataaaccgatagagtt 338  Q
    ||||||||||||| ||||| || |||||||| || ||||||||||| || | ||| |||||||| ||||||||||    
T  23007879 cttaatcaaaggagattagttagacatgattaaaggaataaacaacgtagtaaaaaaaaataaatcgatagagtt 23007805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 338
Target Start/End: Original strand, 23780485 - 23780559
Alignment:
Q  265 cttaatcaaaggaaattagctacacatgattcaatgaataaacaacataat-aaagaaaataaaccgatagagtt 338  Q
    ||||||||||||| ||||| || |||||||| || ||||||||||| || | ||| |||||||| ||||||||||    
T  23780485 cttaatcaaaggagattagttagacatgattaaaggaataaacaacgtagtaaaaaaaaataaatcgatagagtt 23780559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 28894765 - 28894833
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  28894765 agaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 28894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 9e-86; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 68 - 295
Target Start/End: Original strand, 24605440 - 24605665
Alignment:
Q  68 ggttcaatagctagggttagtaatcaattgtaacctaaattcaattcaagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaag 167  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  24605440 ggttcaacagctagggttagtagtcaattgaaacctaaattcaattcaaacaatcgatagaagctagtgttaatagtcatacacatgatattaagaaaag 24605539  T
Q  168 cattaagcaagaataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggctt 267  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||   | |||||| | || ||||||||||||||||||    
T  24605540 cattaagcaataataattatgaataaatactgaattatattgataataatagagtcaaaagctac--tggttcacatatacaatagattcatcttggctt 24605637  T
Q  268 aatcaaaggaaattagctacacatgatt 295  Q
    |||||||||||||||||||| |||||||    
T  24605638 aatcaaaggaaattagctacgcatgatt 24605665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 269
Target Start/End: Original strand, 7395044 - 7395279
Alignment:
Q  19 tcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattc 114  Q
    ||||||||||||||||||| ||||    |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||                 |    
T  7395044 tcaacttcctatctctagtgtcatatgttgagttaatcacatttactatgtccggttcaatagctagggttagtagtcaatt-----------------c 7395126  T
Q  115 aagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataac 214  Q
    |||||||||||||||  |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| | |  | |||||||||| |    
T  7395127 aagcaatcgatagaaactagtgt-aatagccatacacatgatattaagaaaagcatcaagcaagaataattatgaataaagatt--aatatattgatagc 7395223  T
Q  215 aatagagtcaaaagctacatag-attcacagagacgatagattcatcttggcttaa 269  Q
    || |||||||||| |||||| | ||||||||| || ||||||||| ||| ||||||    
T  7395224 aacagagtcaaaaactacatggaattcacagatacaatagattcaccttagcttaa 7395279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 37103631 - 37103706
Alignment:
Q  272 aaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37103631 aaagaaaattagctagacatgataaaaagaataaacaacataataaagaaaataaaccgatagagtttcgccgttg 37103706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 27013974 - 27013894
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||||||||| |||||||||| || |||||    
T  27013974 taatcaaaggaaattagctagacatgattaaaataataaacaacatagtaaagaaaataaatcgatagagttccgtcgttg 27013894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 5670273 - 5670202
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    |||||||||||||||||||| |||||||| ||  |||||||||||||  |||||||||||||||||||||||    
T  5670273 taatcaaaggaaattagctagacatgattaaagaaataaacaacatagcaaagaaaataaaccgatagagtt 5670202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 11703004 - 11703083
Alignment:
Q  262 tggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcg 341  Q
    ||||| ||||||||  ||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||    
T  11703004 tggctcaatcaaagagaattagctagacatgattaaataaataaacaacatagtaaagaaaataaaccgatagaatttcg 11703083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 24605386 - 24605438
Alignment:
Q  78 ctagggttagtaatcaattgtaacctaaattcaattcaagcaatcgatagaag 130  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  24605386 ctagggttagtagtcaattgaaacctaaattcaattcaagcaatcgatagaag 24605438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 5672592 - 5672521
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    ||||||||| |||||||||| |||||||| ||  |||||||||||||  |||||||||||||||||||||||    
T  5672592 taatcaaagaaaattagctagacatgattaaagaaataaacaacatagcaaagaaaataaaccgatagagtt 5672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 12237974 - 12237917
Alignment:
Q  276 gaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgata 333  Q
    ||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||||    
T  12237974 gaaattagctaaacatgattgaaataataaacaacataataaagaaaataaaccgata 12237917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 18859489 - 18859399
Alignment:
Q  250 atagattcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    |||| |||||| ||||||||||||  ||||||||||||| |||||||  || |||||||||||||| |||||| ||||||  |||||||||    
T  18859489 ataggttcatcatggcttaatcaacaaggaaattagctaaacatgatcaaacgaataaacaacatactaaagacaataaattgatagagtt 18859399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 33400744 - 33400810
Alignment:
Q  268 aatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgataga 335  Q
    ||||||||| |||||| || |||||||| || |||||||||||||| ||||||||||||| |||||||    
T  33400744 aatcaaagggaattagatagacatgattaaa-gaataaacaacatagtaaagaaaataaatcgataga 33400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 40617139 - 40617185
Alignment:
Q  301 aataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||||||||| |||||||||||||||||||||||| || |||||    
T  40617139 aataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 40617185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 49270435 - 49270363
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataat-aaagaaaataaaccgatagagtt 338  Q
    |||||||||||||||||||| |||||||| ||  ||||||||| ||| | ||| |||||||||| ||||||||    
T  49270435 taatcaaaggaaattagctagacatgattaaaataataaacaatatagtaaaaaaaaataaaccaatagagtt 49270363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 19864930 - 19864977
Alignment:
Q  300 gaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||| ||| |||||||||||||||||||||||| || |||||    
T  19864930 gaataaacaagatagtaaagaaaataaaccgatagagttccgtcgttg 19864977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 5681106 - 5681060
Alignment:
Q  301 aataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||||    
T  5681106 aataaacaatatagtaaagaaaataaaccgatagagttccgtcgttg 5681060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 15851007 - 15850939
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  15851007 agaagttagggttattagtcatacaaacaatcataagaaaagcattaagcacaaataattttgaataaa 15850939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 26703775 - 26703843
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  26703775 agaagctagagttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 26703843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 26808903 - 26809082
Alignment:
Q  19 tcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattc 114  Q
    ||||||||||||||||||||||||    |||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26808903 tcaacttcctatctctagtttcatatgttgagttaatcacaattactaggtctggttcaatagctagggttagtagtcaattgaaacctaaattcaattc 26809002  T
Q  115 aagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26809003 aagcaatcgatagaacctagtgttattagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 26809082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 103 - 207
Target Start/End: Original strand, 6214516 - 6214620
Alignment:
Q  103 taaattcaattcaagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaat 202  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||| |||    
T  6214516 taaattcaattcaagcaatcgataaaagctagtgttaatagtcagacaaacgatattaagaaaagcattaagcaagaataattatgaataatgactaaat 6214615  T
Q  203 tatat 207  Q
    |||||    
T  6214616 tatat 6214620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 11825763 - 11825862
Alignment:
Q  250 atagattcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||||||||||  ||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||| || |||||    
T  11825763 ataggttcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacataataaagaaaataaaccgatagagttccgtcgttg 11825862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 22083779 - 22083875
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaag 275  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||| | | |||| ||| || |||||||||||||| |||||||||||    
T  22083779 aataattctgaataaagactaaattatattgataacaatagagtcaaaagctacgtgggttcagagatacaatagattcatcttgacttaatcaaag 22083875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 6215033 - 6215115
Alignment:
Q  204 atattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaaattagcta 286  Q
    ||||||||||||||| ||||||||||||||| |||||||||| || |||||||||| |||||||||||||||| | |||||||    
T  6215033 atattgataacaatatagtcaaaagctacatggattcacagatacaatagattcattttggcttaatcaaagggacttagcta 6215115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 22256970 - 22256878
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaa-caacataataaagaaaataaaccgatagagtttcg 341  Q
    |||| |||||| ||||| ||||||||||||||| ||| |||||||| ||| || ||| |||||||||||||||||||||||||||||||||||    
T  22256970 ataggttcatcatggctcaatcaaaggaaattaactagacatgattaaataaaaaaaacaacataataaagaaaataaaccgatagagtttcg 22256878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 340
Target Start/End: Original strand, 22233039 - 22233130
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaa-caacataataaagaaaataaaccgatagagtttc 340  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||||||| ||| || ||| |||||||||||| |||||||||||||||||||||    
T  22233039 ataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaaaaaaacaacataataaaaaaaataaaccgatagagtttc 22233130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 22253700 - 22253609
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaa-caacataataaagaaaataaaccgatagagtttc 340  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||||||| ||| || ||| |||||||||||| |||||||||||||||||||||    
T  22253700 ataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaaaaaaacaacataataaaaaaaataaaccgatagagtttc 22253609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 8397569 - 8397471
Alignment:
Q  250 atagattcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| || |||||||||  ||||||||||||| |||||||  || ||||||||||||||||||||||||||||||| ||||||| || |||||    
T  8397569 ataggttcatcatgacttaatcaacaaggaaattagctagacatgatcaaaggaataaacaacataataaagaaaataaaccg-tagagttccgtcgttg 8397471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 8276667 - 8276621
Alignment:
Q  301 aataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||    
T  8276667 aataaacaacataataaagaaaataaactgatagagttccgtcgttg 8276621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 10432016 - 10431936
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||| |||||||||||||| |||||| | ||  |||||||||| || |||||||||||||||  ||||||| || |||||    
T  10432016 taatccaaggaaattagctagacatgaataaagaaataaacaacctagtaaagaaaataaaccattagagttccgtcgttg 10431936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 36843638 - 36843678
Alignment:
Q  288 acatgattcaatgaataaacaacataataaagaaaataaac 328  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  36843638 acatgattaaaagaataaacaacataataaagaaaataaac 36843678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 23467493 - 23467589
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaac-aacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||||||| ||||| ||||||||| ||||||||| |||| ||| ||  ||||||| |||||| |||| ||||||||| ||||||| |||| |||||    
T  23467493 atagattcatcatggctcaatcaaagg-aattagctagacataattaaagaaataaactaacatagtaaa-aaaataaactgatagagcttcgtcgttg 23467589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 26557191 - 26557118
Alignment:
Q  275 ggaaattagctacacatgattcaatgaataaacaacataat-aaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||| |||||||  ||  ||||||||||||||| ||| ||||||||| ||||||||| || |||||    
T  26557191 ggaaattagctagacatgataaaagaaataaacaacataataaaaaaaaataaactgatagagttccgtcgttg 26557118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 43549027 - 43548959
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  43549027 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattttgaataaa 43548959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 44018076 - 44018144
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  44018076 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 44018144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 587258 - 587056
Alignment:
Q  19 tcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattc 114  Q
    ||||||||||||||||||||| ||    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  587258 tcaacttcctatctctagttttatatgttgagttaatcacaattactatgtccggttcaatagctagggttagtagtcagttgaaacctaaattcaattc 587159  T
Q  115 aagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataac 214  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||| ||| ||||||||||    | |||||||||||||| |||||    
T  587158 aagcaatcgatagaagttagtgttaatagtgataaacacgatattaaaaaaagcattaaccaaaaataattatg----agtactgaattatattaataac 587063  T
Q  215 aatagag 221  Q
    || ||||    
T  587062 aacagag 587056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 626664 - 626866
Alignment:
Q  19 tcaacttcctatctctagtttcat----tgagttgatcacaattactatgtccggttcaatagctagggttagtaatcaattgtaacctaaattcaattc 114  Q
    ||||||||||||||||||||| ||    |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  626664 tcaacttcctatctctagttttatatgttgagttaatcacaattactatgtccggttcaatagttagggttagtagtcagttgaaacctaaattcaattc 626763  T
Q  115 aagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactgaattatattgataac 214  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||| ||| ||||||||||    | |||||||||||||| |||||    
T  626764 aagcaatcgatagaagttagtgttaatagtgatatacacgatattaaaaaaagcattaatcaaaaataattatg----agtactgaattatattaataac 626859  T
Q  215 aatagag 221  Q
    || ||||    
T  626860 aacagag 626866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 5963961 - 5963868
Alignment:
Q  256 tcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||| ||||||||||||  ||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||| || |||||    
T  5963961 tcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacataataaagaaaataaaccgatagagttccgtcgttg 5963868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 18721692 - 18721774
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||||||||| ||||| || |||  |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18721692 taatcaaaggaaattagctagacatggttaaatacataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgtc 18721774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 25591890 - 25591966
Alignment:
Q  273 aaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||| |||||||| |||  |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  25591890 aaggaaattagctagacatgattaaatacataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgtc 25591966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 23613249 - 23613167
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||||||||| ||||| || |||  ||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  23613249 taatcaaaggaaattagctagacatggttaaatacataaataacatagtaaagaaaataaaccgatagagtttcgtcgttgtc 23613167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 25595068 - 25595150
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    ||||||| |||||||||||| |||||||| |||  |||||||||||| |||| |||||||||||||||||||||| |||||||    
T  25595068 taatcaatggaaattagctagacatgattaaatacataaacaacatagtaaaaaaaataaaccgatagagtttcgtcgttgtc 25595150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 18696372 - 18696431
Alignment:
Q  288 acatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18696372 acatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttg 18696431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 452834 - 452776
Alignment:
Q  280 ttagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    ||||||| |||||||  ||| ||||||||||||||||||||||||||| ||||||||||    
T  452834 ttagctagacatgatcaaattaataaacaacataataaagaaaataaatcgatagagtt 452776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 31984657 - 31984608
Alignment:
Q  300 gaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  31984657 gaataaacaacatagtaaagaaaataaaccgatagagcttcgtcgttgtc 31984608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 45155691 - 45155761
Alignment:
Q  277 aaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||| |||||||| ||  ||||||||||||| ||||||||||||||  |||||||| || |||||    
T  45155691 aaattagctagacatgattaaagaaataaacaacatagtaaagaaaataaacatatagagttccgtcgttg 45155761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 9466962 - 9466889
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatactg 199  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  |||||||||||||||| ||||    
T  9466962 agaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattatgaataaagactg 9466889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 10663608 - 10663547
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacat-aataaagaaaataaa 327  Q
    |||||||||||| ||||||| |||||||  || ||||||||||||| |||||||||||||||    
T  10663608 taatcaaaggaatttagctagacatgatcaaaggaataaacaacataaataaagaaaataaa 10663547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 30645167 - 30645103
Alignment:
Q  268 aatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgat 332  Q
    ||||||||| |||||| || |||||||| || |||||||||||||| ||||  ||||||||||||    
T  30645167 aatcaaagggaattagttagacatgattaaaggaataaacaacatagtaaaagaaataaaccgat 30645103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 31981059 - 31980973
Alignment:
Q  262 tggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    ||||| ||||||||| |||||| || |||| ||  || ||||||||||||||  ||||||||| ||||||||||| |||| |||||||    
T  31981059 tggctcaatcaaagggaattagttaaacat-atcaaaggaataaacaacataggaaagaaaattaaccgatagagcttcgtcgttgtc 31980973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 13331923 - 13331855
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||  || ||  ||||||||||||||||||  ||||||||||||||||    
T  13331923 agaagctagggttagtagtcatacgaacaatcataagaaaagcattaagcacaaataattatgaataaa 13331855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 39660241 - 39660309
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  39660241 agaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 39660309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 35432716 - 35432828
Alignment:
Q  82 ggttagtaatcaattgtaacctaaattcaattcaagcaatcgatagaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaat 181  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35432716 ggttagtagtcaattggaacctaaattcaattcaagcaatcgatataagctagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaat 35432815  T
Q  182 aattatgaataaa 194  Q
    |||||||||||||    
T  35432816 aattatgaataaa 35432828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 17944432 - 17944320
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaag-ctacatagattcacagagacgatagattcatcttggcttaatcaaagga 277  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||  | || | | |||||| | || |||||||||||||| |||||||||| ||    
T  17944432 aataattctgaataaagactgaattatattgataacaatagagtcaaaaaacaacgtgggttcacaaatacaatagattcatcttgacttaatcaaa-ga 17944334  T
Q  278 aattagctacacat 291  Q
    ||||||||| ||||    
T  17944333 aattagctagacat 17944320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 26547804 - 26547705
Alignment:
Q  250 atagattcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||||||||||  ||||||||||||| |||||||  || ||||||||||||||||||| | ||||||||||||||||| || |||||    
T  26547804 ataggttcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacataataaaaacaataaaccgatagagttccgtcgttg 26547705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 26551363 - 26551264
Alignment:
Q  250 atagattcatcttggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||||||||||  ||||||||||||| |||||||  || ||||||||||||||||||| | ||||||||||||||||| || |||||    
T  26551363 ataggttcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacataataaaaacaataaaccgatagagttccgtcgttg 26551264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 3194911 - 3194825
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaat-gaataaacaacataataaagaaaataaaccgataga 335  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||||||| ||  |||||||||||||| |||||||||||||||||||||    
T  3194911 ataggttcatcatggctcaatcaaagggaattagctatacatgattaaaaagaataaacaacatagtaaagaaaataaaccgataga 3194825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 22937348 - 22937428
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||  ||||||||||| |||||||| ||  ||||||||||||| |||||||||||||||||||||||| || |||||    
T  22937348 taatcaagagaaattagctagacatgattaaaataataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 22937428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 28441545 - 28441625
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||| |||||||||||||| |||||| | ||  |||||||||| || |||||||||||||||||||||||| || |||||    
T  28441545 taatccaaggaaattagctagacatgaataaagaaataaacaacgtagtaaagaaaataaaccgatagagttccgtcgttg 28441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 34653171 - 34653245
Alignment:
Q  262 tggcttaatcaaaggaaattagctacacatgattcaat-gaataaacaacataataaagaaaataaaccgataga 335  Q
    ||||| ||||||| | ||||||||| |||||||| ||  |||||||||||||| |||||||||||||||||||||    
T  34653171 tggctcaatcaaatggaattagctagacatgattaaaaagaataaacaacatagtaaagaaaataaaccgataga 34653245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 21333102 - 21333163
Alignment:
Q  277 aaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    |||||||||| |||| ||  || |||||||||||||| ||||||||||||||||||||||||    
T  21333102 aaattagctagacataataaaaggaataaacaacatagtaaagaaaataaaccgatagagtt 21333163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 21336118 - 21336179
Alignment:
Q  277 aaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    |||||||||| |||| ||  || |||||||||||||| ||||||||||||||||||||||||    
T  21336118 aaattagctagacataataaaaggaataaacaacatagtaaagaaaataaaccgatagagtt 21336179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 14376231 - 14376288
Alignment:
Q  278 aattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgataga 335  Q
    |||||||||  ||||||  || |||||||||||||| |||||||||||||||||||||    
T  14376231 aattagctaggcatgataaaaggaataaacaacatagtaaagaaaataaaccgataga 14376288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 33321208 - 33321280
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaatact 198  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||||||    
T  33321208 agaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattttgaataaatact 33321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 43491468 - 43491408
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaa 327  Q
    ||||| |||||||||||||| ||||| || |||  |||||||||||| |||||||||||||    
T  43491468 taatccaaggaaattagctagacatggttaaatacataaacaacatagtaaagaaaataaa 43491408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 2453049 - 2452953
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||| | | || |||  ||||||||| ||||||||||||| | |||||||| || |||||    
T  2453049 ataggttcatcatggctcaatcaaagggaattagctagacattaataaa-gaaacaacaacatagtaaagaaaataaatccatagagttccgtcgttg 2452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 32837722 - 32837669
Alignment:
Q  277 aaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccg 330  Q
    |||||||||| |||||||  ||  ||||||||||||| ||||||||||||||||    
T  32837722 aaattagctagacatgataaaagaaataaacaacatagtaaagaaaataaaccg 32837669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 30719558 - 30719462
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaag 275  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||||||    
T  30719558 aataattctgaataaaaactgaattatattgataacaatagagtcaaaagctacgtgggttcacagatacaatagattcatcttgacttaatcaaag 30719462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 1507042 - 1507132
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcg 341  Q
    |||| |||||| ||||| ||||||||  ||||||||| |||||||| ||| ||||||||||||| | |||||||||||||||||||||||||    
T  1507042 ataggttcatcatggctcaatcaaagagaattagctagacatgattaaataaataaacaacatagt-aagaaaataaaccgatagagtttcg 1507132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 26365621 - 26365544
Alignment:
Q  272 aaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||| |||||||||| |||||||  || ||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  26365621 aaagaaaattagctagacatgataaaaggaataaacaacataataaaaaaaataaaccgatagagtttcatcgttgtc 26365544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 1503838 - 1503928
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcg 341  Q
    |||| |||||| ||||| ||||||||  ||||||||| |||||||| ||| ||||||||||||| | ||||||||||| |||||||||||||    
T  1503838 ataggttcatcatggctcaatcaaagagaattagctagacatgattaaataaataaacaacatagt-aagaaaataaatcgatagagtttcg 1503928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 4577563 - 4577466
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| || || ||||||||| ||||||||| |||| ||| ||  ||||||||||||| ||||||||||||| |||||||| |||| |||||    
T  4577563 ataggttcatcatgactcaatcaaagggaattagctagacataattaaagaaataaacaacatagtaaagaaaataaatcgatagagcttcgtcgttg 4577466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 15704416 - 15704475
Alignment:
Q  288 acatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  15704416 acatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttg 15704475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 15719670 - 15719729
Alignment:
Q  288 acatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  15719670 acatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttg 15719729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 29435432 - 29435365
Alignment:
Q  280 ttagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  29435432 ttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 29435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 38005604 - 38005674
Alignment:
Q  277 aaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||| ||||  || || |||||||||||||| |||||||||||||||||||||||| || |||||    
T  38005604 aaattagctagacatagttaaaggaataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 38005674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 38326081 - 38325995
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaat-gaataaacaacataataaagaaaataaaccgataga 335  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||||||| ||  ||||||||||| || ||||||||||||| |||||||    
T  38326081 ataggttcatcatggctcaatcaaagggaattagctagacatgattaaaaagaataaacaacgtagtaaagaaaataaatcgataga 38325995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 38326678 - 38326764
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaat-gaataaacaacataataaagaaaataaaccgataga 335  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||||||| ||  ||||||||||| || ||||||||||||| |||||||    
T  38326678 ataggttcatcatggctcaatcaaagggaattagctagacatgattaaaaagaataaacaacgtagtaaagaaaataaatcgataga 38326764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 29440217 - 29440157
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataa-taaagaaaataaa 327  Q
    |||||||||||| ||||||| |||||| |||| ||||||||||||||| |||||||||||||    
T  29440217 taatcaaaggaatttagctagacatga-tcaaagaataaacaacataagtaaagaaaataaa 29440157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 10600648 - 10600578
Alignment:
Q  277 aaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||| |||||||| ||  || |||||| ||| ||||||||||||||||||| |||| || |||||    
T  10600648 aaattagctagacatgattaaaataacaaacaatatagtaaagaaaataaaccgataaagttccgtcgttg 10600578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 25139344 - 25139425
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||||||||| | || ||| ||  |||||| |||||  ||||||||||||||||||||| || || |||||||    
T  25139344 taatcaaaggaaattagctagatat-attaaaataataaataacatcgtaaagaaaataaaccgatagaattccgtcgttgtc 25139425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 40678056 - 40678124
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  40678056 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 40678124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 7019 - 6908
Alignment:
Q  179 aataattatgaataaatactgaattatattgataacaatagagtcaaaagctacatagattcacagagacgatagattcatcttggcttaatcaaaggaa 278  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||   | |||||||| || |||||||||||||| |||||||||| |||    
T  7019 aataattctgaataaagactgaattatattgataagaatagagtcaaaagctacccgggttcacagatacaatagattcatcttgacttaatcaaa-gaa 6921  T
Q  279 attagctacacat 291  Q
    |||||||| ||||    
T  6920 attagctagacat 6908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 37641566 - 37641488
Alignment:
Q  262 tggcttaatcaa--aggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtt 338  Q
    ||||||||||||  ||||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||    
T  37641566 tggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacataataaagaaaataaaccgatagagtt 37641488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 49716052 - 49715985
Alignment:
Q  280 ttagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  49716052 ttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 49715985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 49719535 - 49719468
Alignment:
Q  280 ttagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  49719535 ttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagttccgtcgttg 49719468  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 1950865 - 1950945
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaat-aaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||||||| |||| || ||| |||| |||||||||| ||||||||||||||| |||||||| || |||||    
T  1950865 taatcaaaggaaattagctagacataat-caaagaattaaacaacatagtaaagaaaataaaccaatagagttccgtcgttg 1950945  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 2793941 - 2793881
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataa-taaagaaaataaa 327  Q
    |||||||||||| ||||||| |||||| |||| ||||||||||||||| |||||||||||||    
T  2793941 taatcaaaggaatttagctagacatga-tcaaagaataaacaacataagtaaagaaaataaa 2793881  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 23441568 - 23441636
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  23441568 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 23441636  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 33898160 - 33898092
Alignment:
Q  126 agaaggtagtgttaatagtcatacacacgatattaagaaaagcattaagcaagaataattatgaataaa 194  Q
    ||||| ||| |||| |||||||||| || ||  ||||||||||||||||||  ||||||| ||||||||    
T  33898160 agaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 33898092  T

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Target: scaffold0214 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 13319 - 13222
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||| ||| ||  ||||||||||||| |||||||||||||||||||||| |||| |||||    
T  13319 ataggttcatcatggctcaatcaaagggaattagctagacataattaaaaaaataaacaacatagtaaagaaaataaaccgatagagcttcgtcgttg 13222  T

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Target: scaffold0214; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 27335 - 27238
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||| ||| ||  ||||||||||||| |||||||||||||||||||||| |||| |||||    
T  27335 ataggttcatcatggctcaatcaaagggaattagctagacataattaaaaaaataaacaacatagtaaagaaaataaaccgatagagcttcgtcgttg 27238  T

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Target: scaffold0214; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 19769 - 19672
Alignment:
Q  250 atagattcatcttggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||| |||||| ||||| ||||||||| ||||||||| |||| ||| ||  | ||||||||||| |||||||||||||||||||||| |||| |||||    
T  19769 ataggttcatcatggctcaatcaaagggaattagctagacataattaaagaattaaacaacatagtaaagaaaataaaccgatagagcttcgtcgttg 19672  T

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Target: scaffold0381 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 5810 - 5890
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||||||||| |||||||||| || |||||    
T  5810 taatcaaaggaaattagctagacatgattaaaataataaacaacatagtaaagaaaataaatcgatagagttccgtcgttg 5890  T

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Target: scaffold0035 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 347
Target Start/End: Complemental strand, 62228 - 62148
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||||||||||||||| |||||||| ||  ||||||||||||  |||||||||||| ||||||||||| || |||||    
T  62228 taatcaaaggaaattagctagacatgattaaaataataaacaacatggtaaagaaaataacccgatagagttccgtcgttg 62148  T

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Target: scaffold0360 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 2180 - 2095
Alignment:
Q  262 tggcttaatcaaaggaaattagctacacatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    ||||| ||||||||| ||||||||| |||| | | ||  || ||||||||||||||||||||||||||||||||||| || |||||    
T  2180 tggctcaatcaaagggaattagctagacatcaataaagaaacaaacaacataataaagaaaataaaccgatagagttccgtcgttg 2095  T

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Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 53328 - 53387
Alignment:
Q  288 acatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  53328 acatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttg 53387  T

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Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 68227 - 68286
Alignment:
Q  288 acatgattcaatgaataaacaacataataaagaaaataaaccgatagagtttcgacgttg 347  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  68227 acatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttg 68286  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 227015 - 226966
Alignment:
Q  300 gaataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  227015 gaataaacaacatagtaaagaaaataaaccgatagagcttcgtcgttgtc 226966  T

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Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 26900 - 26818
Alignment:
Q  267 taatcaaaggaaattagctacacatgattcaatga-ataaacaacataataaagaaaataaaccgatagagtttcgacgttgtc 349  Q
    |||||||| ||||||| ||| ||||||| ||| || |||||||||||| ||||  ||||||||||||||||||||| |||||||    
T  26900 taatcaaatgaaattacctagacatgat-caaagagataaacaacatattaaaagaaataaaccgatagagtttcgtcgttgtc 26818  T

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