View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3503_high_14 (Length: 246)
Name: NF3503_high_14
Description: NF3503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3503_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 40483989 - 40483759
Alignment:
| Q |
1 |
catatgacgattgagcagggtctgcatagatttctagaacaggtaaccaggttctgttaaagtgctgatataagatgaatacattacagaaactagcaca |
100 |
Q |
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| T |
40483989 |
catatgacgattgagcagggtctgcatagatttctagaacaggtaaccaggttctgttaaagtgctgatataagatgaatacattacagaaactagcaca |
40483890 |
T |
|
| Q |
101 |
ggtattaggtcagctgtagagtacctcctttaaattttgtttgctcagcaaaggctttggcctgtattaaatataggtattagctacgaaaattccagca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40483889 |
ggtattaggtcagctgtagagtacctcctttaaattttgtttgctcagcaaaggctttggcctgtattaaatataggtattagctacgaaaattccagca |
40483790 |
T |
|
| Q |
201 |
ttctaagatgttaggagaatgtagaaaattc |
231 |
Q |
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||||||||||||||||||||| ||||||||| |
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| T |
40483789 |
ttctaagatgttaggagaatgcagaaaattc |
40483759 |
T |
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