View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3503_low_2 (Length: 585)

Name: NF3503_low_2
Description: NF3503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3503_low_2
NF3503_low_2
[»] chr6 (31 HSPs)
chr6 (369-570)||(34873152-34873353)
chr6 (387-531)||(9919035-9919180)
chr6 (456-526)||(34874885-34874950)
chr6 (324-368)||(17835612-17835656)
chr6 (324-370)||(3821376-3821422)
chr6 (324-370)||(8778899-8778945)
chr6 (324-370)||(11785353-11785399)
chr6 (324-370)||(19789103-19789149)
chr6 (181-266)||(608545-608630)
chr6 (328-373)||(26391316-26391361)
chr6 (330-370)||(16368080-16368120)
chr6 (324-368)||(21857594-21857638)
chr6 (182-266)||(23653778-23653862)
chr6 (324-368)||(27102115-27102159)
chr6 (324-368)||(27143937-27143981)
chr6 (324-371)||(3800561-3800608)
chr6 (215-266)||(7304023-7304074)
chr6 (335-370)||(16328728-16328763)
chr6 (180-266)||(19713096-19713182)
chr6 (183-266)||(22422252-22422335)
chr6 (331-369)||(2822221-2822259)
chr6 (324-370)||(9188971-9189017)
chr6 (326-372)||(16337099-16337145)
chr6 (324-370)||(28965867-28965913)
chr6 (330-367)||(33014963-33015000)
chr6 (324-365)||(34490350-34490391)
chr6 (214-266)||(12044432-12044484)
chr6 (331-367)||(16352183-16352219)
chr6 (324-368)||(16743293-16743337)
chr6 (330-370)||(25127866-25127906)
chr6 (324-368)||(28647462-28647506)
[»] chr3 (46 HSPs)
chr3 (12-85)||(45633596-45633669)
chr3 (184-266)||(1834608-1834690)
chr3 (193-266)||(49886765-49886838)
chr3 (324-368)||(55466958-55467002)
chr3 (324-370)||(11335329-11335375)
chr3 (324-370)||(39604273-39604319)
chr3 (142-184)||(45633726-45633768)
chr3 (331-368)||(23869001-23869038)
chr3 (324-369)||(51032651-51032696)
chr3 (330-370)||(349446-349486)
chr3 (182-266)||(9027715-9027799)
chr3 (324-368)||(19418184-19418228)
chr3 (210-266)||(21481866-21481922)
chr3 (324-368)||(28300286-28300330)
chr3 (184-264)||(47683894-47683974)
chr3 (184-231)||(19150344-19150391)
chr3 (330-377)||(44127225-44127271)
chr3 (330-369)||(48287670-48287709)
chr3 (330-369)||(49761219-49761258)
chr3 (324-370)||(108429-108475)
chr3 (324-370)||(5398916-5398962)
chr3 (327-365)||(30251010-30251048)
chr3 (336-370)||(30592335-30592369)
chr3 (324-370)||(35376578-35376624)
chr3 (181-223)||(38359339-38359381)
chr3 (324-370)||(40159865-40159911)
chr3 (324-370)||(47849670-47849716)
chr3 (324-370)||(53932418-53932464)
chr3 (181-266)||(11173552-11173636)
chr3 (201-266)||(29533863-29533928)
chr3 (329-370)||(36907046-36907087)
chr3 (181-222)||(39995393-39995434)
chr3 (324-365)||(41369600-41369641)
chr3 (185-266)||(43149231-43149312)
chr3 (324-369)||(43900784-43900829)
chr3 (324-369)||(44334828-44334873)
chr3 (182-259)||(47783684-47783761)
chr3 (329-370)||(50745367-50745408)
chr3 (324-369)||(53133979-53134024)
chr3 (324-368)||(31017421-31017465)
chr3 (324-368)||(37134633-37134677)
chr3 (330-370)||(37894276-37894316)
chr3 (184-224)||(41448208-41448248)
chr3 (182-266)||(44689905-44689989)
chr3 (330-370)||(45186585-45186625)
chr3 (324-368)||(48179080-48179124)
[»] chr4 (66 HSPs)
chr4 (180-266)||(36081913-36081999)
chr4 (185-261)||(53763699-53763775)
chr4 (324-369)||(12074178-12074223)
chr4 (185-266)||(41170874-41170955)
chr4 (179-266)||(9096039-9096125)
chr4 (330-369)||(53463103-53463142)
chr4 (324-375)||(54165188-54165239)
chr4 (324-370)||(1562563-1562609)
chr4 (324-370)||(35661624-35661670)
chr4 (327-369)||(40755920-40755962)
chr4 (183-261)||(46799862-46799940)
chr4 (324-370)||(49424847-49424893)
chr4 (186-223)||(12297239-12297276)
chr4 (324-369)||(31147230-31147275)
chr4 (324-369)||(47998593-47998638)
chr4 (324-368)||(149314-149358)
chr4 (324-368)||(3968885-3968929)
chr4 (324-368)||(4489825-4489869)
chr4 (182-266)||(18874809-18874893)
chr4 (324-368)||(25139982-25140026)
chr4 (324-368)||(40335789-40335833)
chr4 (330-370)||(47288080-47288120)
chr4 (324-368)||(55996422-55996466)
chr4 (179-266)||(18634803-18634890)
chr4 (215-266)||(46355209-46355260)
chr4 (215-266)||(53781755-53781806)
chr4 (324-370)||(10096769-10096815)
chr4 (324-370)||(12241056-12241102)
chr4 (192-234)||(25840613-25840655)
chr4 (324-370)||(33820363-33820409)
chr4 (342-376)||(35037601-35037635)
chr4 (324-370)||(42516648-42516694)
chr4 (324-370)||(44170646-44170692)
chr4 (324-370)||(48743708-48743754)
chr4 (324-370)||(49768896-49768942)
chr4 (324-370)||(51389314-51389360)
chr4 (324-370)||(51397898-51397944)
chr4 (324-370)||(55595947-55595993)
chr4 (324-369)||(9472540-9472585)
chr4 (324-369)||(10994179-10994224)
chr4 (324-369)||(11012140-11012185)
chr4 (215-264)||(18944389-18944438)
chr4 (182-231)||(20760252-20760301)
chr4 (182-231)||(20766643-20766692)
chr4 (181-266)||(24310405-24310490)
chr4 (329-374)||(29407058-29407103)
chr4 (324-365)||(40308444-40308485)
chr4 (324-365)||(43759178-43759219)
chr4 (324-365)||(46364006-46364047)
chr4 (186-266)||(52636344-52636425)
chr4 (324-368)||(169529-169573)
chr4 (186-218)||(12297393-12297425)
chr4 (330-370)||(20118779-20118819)
chr4 (324-368)||(24772671-24772715)
chr4 (324-368)||(25725721-25725765)
chr4 (324-368)||(28203392-28203436)
chr4 (327-371)||(29525855-29525899)
chr4 (324-368)||(35824133-35824177)
chr4 (324-368)||(39881057-39881101)
chr4 (324-368)||(40721991-40722035)
chr4 (329-369)||(43168746-43168786)
chr4 (324-368)||(44250254-44250298)
chr4 (324-368)||(46912826-46912870)
chr4 (324-368)||(51389101-51389145)
chr4 (324-368)||(53357104-53357148)
chr4 (330-370)||(53662461-53662501)
[»] chr1 (59 HSPs)
chr1 (185-266)||(3919400-3919481)
chr1 (181-262)||(39815452-39815530)
chr1 (324-370)||(49596233-49596279)
chr1 (330-370)||(30973550-30973590)
chr1 (215-266)||(37947138-37947189)
chr1 (324-370)||(43755705-43755751)
chr1 (324-370)||(44112452-44112498)
chr1 (324-370)||(45042259-45042305)
chr1 (324-370)||(52233248-52233294)
chr1 (217-266)||(8577422-8577471)
chr1 (324-369)||(18541078-18541123)
chr1 (324-369)||(30439249-30439294)
chr1 (324-369)||(39669805-39669850)
chr1 (324-369)||(44641930-44641975)
chr1 (324-369)||(51193158-51193203)
chr1 (324-368)||(30505363-30505407)
chr1 (330-369)||(1689390-1689429)
chr1 (330-377)||(3919443-3919490)
chr1 (183-266)||(7420736-7420819)
chr1 (324-367)||(11068426-11068469)
chr1 (324-371)||(44672057-44672104)
chr1 (327-370)||(48678983-48679026)
chr1 (184-266)||(7423116-7423197)
chr1 (324-370)||(12708088-12708134)
chr1 (324-370)||(12713542-12713588)
chr1 (324-370)||(12717633-12717679)
chr1 (184-266)||(29094635-29094717)
chr1 (335-369)||(47386832-47386866)
chr1 (193-231)||(49931561-49931599)
chr1 (324-365)||(20268540-20268581)
chr1 (324-369)||(25989011-25989056)
chr1 (324-369)||(27810274-27810319)
chr1 (324-377)||(29632425-29632478)
chr1 (324-369)||(36690599-36690644)
chr1 (324-369)||(36706700-36706745)
chr1 (193-266)||(36794717-36794790)
chr1 (324-369)||(50017450-50017495)
chr1 (215-259)||(835980-836024)
chr1 (324-368)||(3606121-3606165)
chr1 (324-368)||(5315211-5315255)
chr1 (324-368)||(8464540-8464584)
chr1 (324-368)||(9445108-9445152)
chr1 (330-370)||(11947793-11947833)
chr1 (324-368)||(13411954-13411998)
chr1 (324-376)||(15182610-15182662)
chr1 (324-376)||(18958996-18959048)
chr1 (330-370)||(21433434-21433474)
chr1 (183-231)||(30535989-30536037)
chr1 (330-370)||(30535989-30536029)
chr1 (324-368)||(31184281-31184325)
chr1 (182-266)||(31244620-31244704)
chr1 (324-368)||(42615860-42615904)
chr1 (183-223)||(44672063-44672103)
chr1 (347-375)||(45272199-45272227)
chr1 (324-368)||(45470867-45470911)
chr1 (324-368)||(46947981-46948025)
chr1 (324-368)||(49621363-49621407)
chr1 (324-368)||(49699779-49699823)
chr1 (324-368)||(51250302-51250346)
[»] chr7 (36 HSPs)
chr7 (327-375)||(2005725-2005773)
chr7 (184-266)||(7295569-7295651)
chr7 (324-368)||(33212042-33212086)
chr7 (324-369)||(25940659-25940704)
chr7 (327-368)||(39369302-39369343)
chr7 (330-370)||(46829477-46829517)
chr7 (324-367)||(2790178-2790221)
chr7 (330-365)||(6269369-6269404)
chr7 (215-266)||(23034231-23034282)
chr7 (324-375)||(38096466-38096517)
chr7 (335-370)||(41590558-41590593)
chr7 (327-370)||(42276089-42276132)
chr7 (215-266)||(44185278-44185329)
chr7 (324-370)||(9055265-9055311)
chr7 (324-370)||(16567314-16567360)
chr7 (324-370)||(16598302-16598348)
chr7 (324-370)||(27331054-27331100)
chr7 (219-265)||(27866459-27866505)
chr7 (324-370)||(36920802-36920847)
chr7 (324-370)||(41966330-41966376)
chr7 (329-370)||(6822554-6822595)
chr7 (183-236)||(9363385-9363438)
chr7 (324-369)||(19426579-19426624)
chr7 (324-369)||(27075469-27075514)
chr7 (324-369)||(27202797-27202842)
chr7 (330-367)||(48383351-48383388)
chr7 (342-370)||(1838477-1838505)
chr7 (330-370)||(9363385-9363425)
chr7 (324-368)||(23329902-23329946)
chr7 (324-368)||(28081809-28081853)
chr7 (324-368)||(31364911-31364955)
chr7 (324-368)||(32044780-32044824)
chr7 (330-370)||(35823008-35823048)
chr7 (324-368)||(40212516-40212560)
chr7 (325-369)||(42467203-42467247)
chr7 (324-368)||(42476572-42476616)
[»] chr8 (51 HSPs)
chr8 (185-266)||(34247876-34247957)
chr8 (324-368)||(20473779-20473823)
chr8 (188-266)||(1422593-1422671)
chr8 (324-369)||(1332495-1332540)
chr8 (324-368)||(31806299-31806343)
chr8 (324-370)||(27630895-27630941)
chr8 (324-370)||(34996387-34996433)
chr8 (324-370)||(35818935-35818981)
chr8 (180-225)||(20996178-20996223)
chr8 (324-369)||(34970206-34970251)
chr8 (186-266)||(9305886-9305966)
chr8 (214-266)||(32234369-32234421)
chr8 (324-368)||(43873718-43873762)
chr8 (324-375)||(2768140-2768191)
chr8 (327-370)||(3950108-3950151)
chr8 (330-377)||(5925046-5925093)
chr8 (183-266)||(33511703-33511786)
chr8 (184-266)||(8233383-8233465)
chr8 (324-370)||(9738720-9738766)
chr8 (324-374)||(10553110-10553160)
chr8 (324-370)||(12959936-12959982)
chr8 (324-370)||(40719670-40719716)
chr8 (324-370)||(41305009-41305055)
chr8 (180-266)||(41776277-41776363)
chr8 (330-375)||(3155836-3155881)
chr8 (324-369)||(3988904-3988949)
chr8 (324-369)||(6161947-6161992)
chr8 (324-369)||(8074751-8074796)
chr8 (324-369)||(9048343-9048388)
chr8 (181-222)||(29107991-29108032)
chr8 (324-369)||(38504169-38504214)
chr8 (329-370)||(41639820-41639861)
chr8 (330-370)||(67194-67234)
chr8 (193-233)||(2261481-2261521)
chr8 (324-368)||(3775898-3775942)
chr8 (330-370)||(11584094-11584134)
chr8 (338-370)||(12655920-12655952)
chr8 (324-368)||(12659052-12659096)
chr8 (324-368)||(14548850-14548894)
chr8 (324-368)||(20852919-20852963)
chr8 (324-368)||(22767132-22767176)
chr8 (324-368)||(30943866-30943910)
chr8 (330-370)||(33100502-33100542)
chr8 (327-367)||(34494668-34494708)
chr8 (183-231)||(35792067-35792115)
chr8 (324-368)||(35937539-35937583)
chr8 (324-368)||(39153709-39153753)
chr8 (324-368)||(40608513-40608557)
chr8 (182-266)||(42651022-42651106)
chr8 (191-223)||(43597768-43597800)
chr8 (182-266)||(45405720-45405804)
[»] chr5 (24 HSPs)
chr5 (186-266)||(12612906-12612986)
chr5 (324-368)||(31708370-31708414)
chr5 (324-368)||(36416089-36416133)
chr5 (180-266)||(17574107-17574193)
chr5 (324-370)||(38500941-38500987)
chr5 (324-369)||(2050926-2050971)
chr5 (324-368)||(20125389-20125433)
chr5 (218-265)||(5043028-5043075)
chr5 (330-369)||(6940183-6940222)
chr5 (324-367)||(24463258-24463301)
chr5 (324-370)||(5996665-5996711)
chr5 (324-370)||(18638852-18638898)
chr5 (324-370)||(33743360-33743406)
chr5 (330-368)||(38293392-38293430)
chr5 (333-370)||(372420-372457)
chr5 (324-369)||(2456025-2456070)
chr5 (329-370)||(4434480-4434521)
chr5 (330-375)||(6758824-6758869)
chr5 (324-369)||(8897381-8897426)
chr5 (324-369)||(29807029-29807074)
chr5 (324-368)||(6529019-6529063)
chr5 (324-368)||(15529832-15529876)
chr5 (330-370)||(21012566-21012606)
chr5 (324-368)||(32873176-32873220)
[»] scaffold0024 (2 HSPs)
scaffold0024 (324-371)||(60466-60513)
scaffold0024 (182-266)||(48756-48840)
[»] chr2 (43 HSPs)
chr2 (324-375)||(34442106-34442157)
chr2 (324-375)||(43994040-43994091)
chr2 (324-370)||(7498018-7498064)
chr2 (324-370)||(10749706-10749752)
chr2 (184-266)||(35518377-35518459)
chr2 (324-369)||(11442671-11442716)
chr2 (331-375)||(694273-694317)
chr2 (324-368)||(11980651-11980695)
chr2 (324-368)||(31635837-31635881)
chr2 (324-368)||(33857217-33857261)
chr2 (324-367)||(9202543-9202586)
chr2 (330-369)||(14499057-14499096)
chr2 (327-370)||(16447276-16447319)
chr2 (215-262)||(23141460-23141507)
chr2 (215-262)||(23553250-23553297)
chr2 (183-234)||(28508477-28508528)
chr2 (215-262)||(30340100-30340147)
chr2 (330-369)||(44484689-44484728)
chr2 (324-370)||(1052523-1052569)
chr2 (324-370)||(1889145-1889191)
chr2 (324-370)||(2013312-2013358)
chr2 (217-259)||(4114352-4114394)
chr2 (329-371)||(6666017-6666059)
chr2 (184-266)||(8757646-8757728)
chr2 (330-368)||(12784432-12784470)
chr2 (324-370)||(13466102-13466148)
chr2 (324-370)||(14797677-14797723)
chr2 (184-266)||(22296016-22296098)
chr2 (324-370)||(35965573-35965619)
chr2 (217-266)||(3366133-3366182)
chr2 (324-369)||(6365185-6365230)
chr2 (181-262)||(6742294-6742375)
chr2 (193-230)||(11175143-11175180)
chr2 (324-365)||(19631389-19631430)
chr2 (324-365)||(19828290-19828331)
chr2 (324-369)||(23345016-23345061)
chr2 (342-375)||(24766145-24766178)
chr2 (330-370)||(3299138-3299178)
chr2 (330-370)||(5031921-5031961)
chr2 (330-370)||(6336250-6336290)
chr2 (214-266)||(26273276-26273328)
chr2 (324-368)||(32688571-32688615)
chr2 (324-368)||(36587495-36587539)
[»] scaffold0014 (1 HSPs)
scaffold0014 (324-370)||(199264-199310)
[»] scaffold0504 (1 HSPs)
scaffold0504 (324-369)||(10762-10807)
[»] scaffold0020 (1 HSPs)
scaffold0020 (324-368)||(155906-155950)
[»] scaffold0057 (1 HSPs)
scaffold0057 (327-370)||(21655-21698)
[»] scaffold0154 (2 HSPs)
scaffold0154 (324-378)||(4305-4359)
scaffold0154 (324-369)||(9875-9920)
[»] scaffold0148 (1 HSPs)
scaffold0148 (324-370)||(9451-9497)
[»] scaffold0087 (1 HSPs)
scaffold0087 (324-370)||(27090-27136)
[»] scaffold0006 (1 HSPs)
scaffold0006 (324-370)||(278467-278513)
[»] scaffold0072 (1 HSPs)
scaffold0072 (329-370)||(14572-14613)
[»] scaffold0032 (1 HSPs)
scaffold0032 (324-369)||(17435-17480)
[»] scaffold0003 (1 HSPs)
scaffold0003 (217-266)||(88910-88959)
[»] scaffold0432 (1 HSPs)
scaffold0432 (184-236)||(6540-6592)
[»] scaffold0238 (1 HSPs)
scaffold0238 (324-368)||(16387-16431)
[»] scaffold0172 (1 HSPs)
scaffold0172 (324-368)||(16975-17019)
[»] scaffold0130 (1 HSPs)
scaffold0130 (330-370)||(25701-25741)
[»] scaffold0049 (1 HSPs)
scaffold0049 (324-368)||(72196-72240)
[»] scaffold0002 (1 HSPs)
scaffold0002 (324-368)||(6427-6471)


Alignment Details
Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 369 - 570
Target Start/End: Original strand, 34873152 - 34873353
Alignment:
Q  369 ttgttttatggcacataacataacacatgctatattctagaaagcaaggacagacactgacatgaaaactgttccaatgcactgagtaaacatgtaagtc 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34873152 ttgttttatggcacataacataacacatgctatattctagaaagcaaggacacacactgacatgaaaaatgttccaatgcactgagtaaacatgtaagtc 34873251  T
Q  469 atgtatctatttcatattttaactcgataaggccatttaacattgaaaaataaaattaggattttctaaataccaagtattatcgacacagaacatattc 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34873252 atgtatctatttcatattttaactcgataaggccatttaacattgaaaaataaaattaggattttctaaataccaagtattatcgacacagaacatattc 34873351  T
Q  569 tt 570  Q
    ||    
T  34873352 tt 34873353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 531
Target Start/End: Complemental strand, 9919180 - 9919035
Alignment:
Q  387 cataacacatgctatattctagaaagcaaggacagacactgacatgaaaactgttccaatgcactgagtaaacatgtaagtcatgtatctatttcata-t 485  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||| | || || |||| ||||||| |    
T  9919180 cataacacatactatattctagaaagcaaggacacacactgacatgaaaattgttccaatgcactaaggaaacatgttaatcttgcatctgtttcatatt 9919081  T
Q  486 tttaactcgataaggccatttaacattgaaaaataaaattaggatt 531  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  9919080 tttaactcgacatggccatttaacattgaaaaataaaattaggatt 9919035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 34874885 - 34874950
Alignment:
Q  456 aaacatgtaagtcatgtatctatttcatattttaactcgataaggccatttaacattgaaaaataaaatta 526  Q
    |||||||| |||||||||||| ||||||||||||||||     || |||||||||||||||||||||||||    
T  34874885 aaacatgttagtcatgtatctgtttcatattttaactc-----ggtcatttaacattgaaaaataaaatta 34874950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 17835656 - 17835612
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  17835656 ttgtcaaaaagttgttagaaaagggttgtacaaatatcatttctc 17835612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 3821422 - 3821376
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  3821422 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 3821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 8778899 - 8778945
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  8778899 ttgtcaaaaagttgttaaaaaatggttgtacaaatatcatttctctt 8778945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 11785399 - 11785353
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||    
T  11785399 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctctt 11785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 19789103 - 19789149
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||||    
T  19789103 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 19789149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 608545 - 608630
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||| ||| ||||||| ||||  |||||   |||||| ||||||||||||| || || ||| |||||||||||||||||||||    
T  608545 aaaagagcaatgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtcaaaaacaat 608630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 26391316 - 26391361
Alignment:
Q  328 caaaaaattgttataaaagggttgtacaaatatcatttctcttgtt 373  Q
    |||||| |||||| |||| |||||||||||||||||||||||||||    
T  26391316 caaaaagttgttaaaaaatggttgtacaaatatcatttctcttgtt 26391361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 16368080 - 16368120
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  16368080 aaaaattattataaaatggttgtacaaatatcatttctctt 16368120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 21857594 - 21857638
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  21857594 ttgtcaacaaattgtcataaaatggttgtacaaatatcatttctc 21857638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 23653778 - 23653862
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| ||||||||||| |||| |||||   ||||||||||  |||||||| ||| || ||| ||||||| |||||||||||||    
T  23653778 aaagagcaataatatttgaacaaccatttgctaacaacttttatgacaacctcatttttctctcttctcataggtcaaaaacaat 23653862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 27102159 - 27102115
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  27102159 ttgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 27143981 - 27143937
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  27143981 ttgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 3800608 - 3800561
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttg 371  Q
    |||||||||| |||| |||||| ||||| |||||||||||||||||||    
T  3800608 ttgtcaaaaagttgtaataaaatggttgcacaaatatcatttctcttg 3800561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 7304023 - 7304074
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||| |||||||| ||| || ||| |||||||||||||||||||||    
T  7304023 acaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaat 7304074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 16328728 - 16328763
Alignment:
Q  335 ttgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| ||||||||||||||||||||||||    
T  16328728 ttgttataaaatggttgtacaaatatcatttctctt 16328763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 19713182 - 19713096
Alignment:
Q  180 aaaaagagtaataatatttgtacaatcattttta-aacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||| ||||||| |||| | |||||| ||||||||||||||||||||| || |  ||| || |||||||| |||||||||    
T  19713182 aaaaagagtaatgatatttgaacaa-cttttttacaacaacttttgggacaaccttgttgtgctctcttttcattggtaaaaaacaat 19713096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 22422335 - 22422252
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||| ||||||| ||||| |||||   ||||||||||| ||||| || || || ||| |||||||| ||||||||||||    
T  22422335 aagagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttctcattagtcaaaaacaat 22422252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 2822259 - 2822221
Alignment:
Q  331 aaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  2822259 aaaattattataaaatggttgtacaaatatcatttctct 2822221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 9188971 - 9189017
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||||    
T  9188971 ttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 9189017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 372
Target Start/End: Original strand, 16337099 - 16337145
Alignment:
Q  326 gtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgt 372  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||    
T  16337099 gtcaaaaaattgtcataaagtgattgtacaaatatcatttctcttgt 16337145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 28965867 - 28965913
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| | |||| ||||||||||||||||||||||||    
T  28965867 ttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctctt 28965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Original strand, 33014963 - 33015000
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  33014963 aaaaattgttttaaaatggttgtacaaatatcatttct 33015000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 34490391 - 34490350
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  34490391 ttgtctaaaaattgttaaaaaatggttgtacaaatatcattt 34490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 12044484 - 12044432
Alignment:
Q  214 aacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||  ||||||||  || || |||||||||||||||||||||||||    
T  12044484 aacaacttttatgacaacctcctttttctcttttctcattggtcaaaaacaat 12044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 16352183 - 16352219
Alignment:
Q  331 aaaattgttataaaagggttgtacaaatatcatttct 367  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  16352183 aaaattgttataaaatggttgtataaatatcatttct 16352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 16743293 - 16743337
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||    
T  16743293 ttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 16743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 25127866 - 25127906
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  25127866 aaaagttgttacaaaatggttgtacaaatatcatttctctt 25127906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 28647462 - 28647506
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||    
T  28647462 ttgtcaaaaaattgtaataaaatagttatacaaatatcatttctc 28647506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 45633596 - 45633669
Alignment:
Q  12 agagagcaggatacggtgcgagtgtggtgtcgtttggagtgaaggcggctacatggttggctggaaattggaac 85  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45633596 agagagcatgatacggcgcgagtgtggtgtcgtttggagtgaaggcggctacatggttggctggaaattggaac 45633669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 1834690 - 1834608
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| |||||||||||| | |||||||| |||||||||||||| ||||||||| |||| | ||||||||||||||||||    
T  1834690 agagtaatgatatttgtacaaccctttttaaataacttttgggacaatcttattattctcttctttcattggtcaaaaacaat 1834608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 49886838 - 49886765
Alignment:
Q  193 atatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||| |||||| | |||||| |||||||||    
T  49886838 atatttgtacaactatttttaaacaacttttaggacaaccttattattctctttttttattggttaaaaacaat 49886765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 55467002 - 55466958
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||    
T  55467002 ttgtcaaaaaattcttataaaatggttgtacaaatatcatttctc 55466958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 11335329 - 11335375
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  11335329 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctctt 11335375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 39604273 - 39604319
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  39604273 ttgtcaaaaaattgttgaaaaatggttgtacaaatatcatttctctt 39604319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 45633726 - 45633768
Alignment:
Q  142 ggtgtgtaaggtttgatctgtattttgttttttaaatgaaaaa 184  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  45633726 ggtgtgtaaggtttaatatgtattttgttttttaaatgaaaaa 45633768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 23869001 - 23869038
Alignment:
Q  331 aaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  23869001 aaaattgttataaaatggttgtacaaatatcatttctc 23869038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 51032651 - 51032696
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  51032651 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctct 51032696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 349446 - 349486
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  349446 aaaaattattataaaatggttgtacaaatatcatttctctt 349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 9027799 - 9027715
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||| ||||||| ||||  |||||   ||||||||||| |||||||| || || ||| |||| ||||||||||||||||    
T  9027799 aaagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaat 9027715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 19418184 - 19418228
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||    
T  19418184 ttgtcaaaaagttgtcataaaatggttgtacaaatatcatttctc 19418228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 21481922 - 21481866
Alignment:
Q  210 tttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||| |||||||||| |||||||| ||| || ||| |||||||||||||||||||||    
T  21481922 tttatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaat 21481866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 28300330 - 28300286
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||    
T  28300330 ttgtcaaaaaattataataaaatggttgtacaaatatcatttctc 28300286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 47683974 - 47683894
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaaca 264  Q
    |||||||| |||||||||||| ||||||   |||||||||| ||||||||| |  || ||| |||| ||||||||||||||    
T  47683974 agagtaatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaaca 47683894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 19150391 - 19150344
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaac 231  Q
    |||| ||| |||||||||||||||||||| ||||||||||| ||||||    
T  19150391 agagaaatgatatttgtacaatcattttttaacaacttttgtgacaac 19150344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 44127225 - 44127271
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctcttgttttat 377  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  44127225 aaaaattgttaaaaaagg-ttgtacaaatatcatttctcttattttat 44127271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 369
Target Start/End: Complemental strand, 48287709 - 48287670
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  48287709 aaaagttgttataaaatggttgtacaaatatcatttctct 48287670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 49761219 - 49761258
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  49761219 aaaaattgttagaaaatggttgtacaaatatcatttctct 49761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 108475 - 108429
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||    
T  108475 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 108429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 5398962 - 5398916
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||    
T  5398962 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 5398916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 30251010 - 30251048
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  30251010 tcaaaaaattgttagaaaatggttgtacaaatatcattt 30251048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 370
Target Start/End: Complemental strand, 30592369 - 30592335
Alignment:
Q  336 tgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| ||||||||||||||||||||||||    
T  30592369 tgttataaaatggttgtacaaatatcatttctctt 30592335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 35376578 - 35376624
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  35376578 ttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctctt 35376624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 38359381 - 38359339
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaactttt 223  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||    
T  38359381 aaaagagaaatgatatttgtacaatcattttttaacaactttt 38359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 40159865 - 40159911
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| ||||  |||||||||||||||||||||||    
T  40159865 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctctt 40159911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 47849716 - 47849670
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||| | | |||| ||||||||||||||||||||||||    
T  47849716 ttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctctt 47849670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 53932418 - 53932464
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  53932418 ttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctctt 53932464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 11173636 - 11173552
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||||||||||| |||| || ||| | |||||||||| |||||| |  || || ||| || ||||||||||||||||||    
T  11173636 aaaagagtaataatatttgaacaacca-tttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 11173552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 29533928 - 29533863
Alignment:
Q  201 acaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||   |||||||||| |||||| || || || ||| |||||||||||||||||||||    
T  29533928 acaatcattttggtacaacttttgagacaactttgttgttctctcttctcattggtcaaaaacaat 29533863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 36907087 - 36907046
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||    
T  36907087 aaaaagttgttataaaatggttgtataaatatcatttctctt 36907046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 39995393 - 39995434
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttt 222  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||    
T  39995393 aaaagagaaataatatttgtataatcattttgaaacaacttt 39995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 41369641 - 41369600
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||||||||||| ||| |||| |||||||||||||||||||    
T  41369641 ttgtcaaaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 43149231 - 43149312
Alignment:
Q  185 gagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||| ||||||| ||||  |||||   ||||||||||| |||||||| || || ||| |||| ||||||||||||||||    
T  43149231 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaat 43149312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 43900784 - 43900829
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||| |||||  |||||||||||||||||||||||    
T  43900784 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctct 43900829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 44334828 - 44334873
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||| |||||  |||||||||||||||||||||||    
T  44334828 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctct 44334873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 47783761 - 47783684
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaa 259  Q
    |||||| ||| |||||| ||||||||||||  ||||||||| ||||||| |||||| || ||| || | |||||||||    
T  47783761 aaagaggaattatatttatacaatcattttgtaacaactttggggacaatcttattcttctctctttttattggtcaa 47783684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 50745408 - 50745367
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||| |||| ||||||||||||||||||| ||||    
T  50745408 aaaaaattgttagaaaatggttgtacaaatatcatttttctt 50745367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 53133979 - 53134024
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||| |||||||| |||||||| |||| ||||||||||||||||||    
T  53133979 ttgttaaaaaattattataaaatggttttacaaatatcatttctct 53134024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 31017421 - 31017465
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||| | ||||||||||||||||||||    
T  31017421 ttgtcaaaaagttgttagaaaatgattgtacaaatatcatttctc 31017465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 37134633 - 37134677
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||| |||||||||| ||||||  |||||||||||||||||||||    
T  37134633 ttgttaaaaaattgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 37894276 - 37894316
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  37894276 aaaagttgttagaaaatggttgtacaaatatcatttctctt 37894316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 41448248 - 41448208
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttg 224  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  41448248 agagaaatgatatttgtacaaccatttttaaacaacttttg 41448208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 44689989 - 44689905
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| | ||||||| |||||  ||||  ||||||||||||||||||||| || |  ||| || | ||||||||||||||||    
T  44689989 aaagagtagtgatatttgaacaattcttttggaacaacttttgggacaaccttgttgtgttctctttttattggtcaaaaacaat 44689905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 45186585 - 45186625
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| |||| ||||||||||||||| ||||||||    
T  45186585 aaaaattgttagaaaatggttgtacaaatatcttttctctt 45186625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 48179080 - 48179124
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||| ||||| ||||  |||||||||||||||||||||    
T  48179080 ttgtcaaaaaactgttagaaaatagttgtacaaatatcatttctc 48179124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 36081999 - 36081913
Alignment:
Q  180 aaaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  36081999 aaaaagagtaatgatacttgtacaaccctttttaaacaacttttgggacaaccttattattctcttctctcattggtcaaaaacaat 36081913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 53763699 - 53763775
Alignment:
Q  185 gagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaa 261  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  53763699 gagtaatgatatttgtacaaccctttttaaacaacttttgggacaaccttattattcttttttctcattggtcaaaa 53763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 12074178 - 12074223
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  12074178 ttgtcaaaaaattgtcataaaatggttgtacaaatatcatttctct 12074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 41170955 - 41170874
Alignment:
Q  185 gagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||| |||| ||||||| |||||||| ||||||||||||||||||||  |||| | |  | ||||||||||||||||||    
T  41170955 gagtaatgatatatgtacaaccatttttagacaacttttgggacaaccttgctattctttcatttcattggtcaaaaacaat 41170874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 9096125 - 9096039
Alignment:
Q  179 gaaaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||||| ||||||| ||||| ||||| | ||||||||||| |||||||| || || | |||| | ||||||||||||||||    
T  9096125 gaaaaagagtaatgatatttgaacaattattttgatacaacttttggtacaaccttgttgttct-tttttttattggtcaaaaacaat 9096039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 53463103 - 53463142
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  53463103 aaaaattgttataaaatggttgtacaaatatcatttctct 53463142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 54165188 - 54165239
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| ||||    
T  54165188 ttgtcaaaaaattgtagtaaaatggttgtacaaatatcatttctcttttttt 54165239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 1562563 - 1562609
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  1562563 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctctt 1562609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 35661624 - 35661670
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  35661624 ttgtctaaaaattgtcataaaatggttgtacaaatatcatttctctt 35661670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 40755962 - 40755920
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  40755962 tcaaaaaattgttagaaaatggttgtacaaatatcatttctct 40755920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 46799940 - 46799862
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaa 261  Q
    ||||| ||| ||||||| |||||||||||   |||| ||||||||||||||| || || ||| ||||||||||||||||    
T  46799940 aagagcaatgatatttgaacaatcattttggtacaatttttgggacaaccttgttgttctctattctcattggtcaaaa 46799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 49424847 - 49424893
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  49424847 ttgtcaaaaagttgttacaaaaaggttgtacaaatatcatttctctt 49424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 12297276 - 12297239
Alignment:
Q  186 agtaataatatttgtacaatcatttttaaacaactttt 223  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12297276 agtaataatatttgtacaatcatttttaaacaaatttt 12297239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 31147275 - 31147230
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||    
T  31147275 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctct 31147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 47998638 - 47998593
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  47998638 ttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctct 47998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 149314 - 149358
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||    
T  149314 ttgtcaaaaaattgttagaaattggttgtacaaatatcatttctc 149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 3968929 - 3968885
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  3968929 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 3968885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 4489825 - 4489869
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||    
T  4489825 ttgtcaaaaaattgttagaaaatggttatacaaatatcatttctc 4489869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 18874809 - 18874893
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| ||| ||||||| ||||||||||   ||||||||||  ||||||||  || || ||| |||||||||||||||||||||    
T  18874809 aaagagcaatgatatttgaacaatcatttgctaacaacttttatgacaacctcctttttctctcttctcattggtcaaaaacaat 18874893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 25139982 - 25140026
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  25139982 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctc 25140026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 40335833 - 40335789
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||    
T  40335833 ttgtcaaaaaattgtaataaaatgattgtacaaatatcatttctc 40335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 47288120 - 47288080
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  47288120 aaaaattgttacaaaatggttgtacaaatatcatttctctt 47288080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 55996466 - 55996422
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||    
T  55996466 ttgtcaaaaaattgttagaaaatgattgtacaaatatcatttctc 55996422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 18634890 - 18634803
Alignment:
Q  179 gaaaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||| ||||||| |||||| ||||| |||||| |||||| ||||  |||||||||||| || ||| |||| |||| | |||||||||    
T  18634890 gaaaatgagtaatgatatttatacaaccattttgaaacaatttttaagacaaccttatttttctctcttcttattgataaaaaacaat 18634803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 46355209 - 46355260
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||||||||| ||  |||| |||||||||||||||||| ||||||    
T  46355209 acaacttttgggacaactttggtattctcttttctcattggtcaataacaat 46355260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 53781755 - 53781806
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||||||||| ||||  ||| || ||||||||||||||||||    
T  53781755 acaacttttgggacaaccttgttatgctctcttttcattggtcaaaaacaat 53781806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 10096769 - 10096815
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||||    
T  10096769 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctctt 10096815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 12241102 - 12241056
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| ||||  |||||||||||||||||||||||    
T  12241102 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctctt 12241056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 25840613 - 25840655
Alignment:
Q  192 aatatttgtacaatcatttttaaacaacttttgggacaacctt 234  Q
    ||||||||||||| ||||||||||||||||||  |||||||||    
T  25840613 aatatttgtacaaccatttttaaacaacttttatgacaacctt 25840655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 33820363 - 33820409
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| ||||  |||||||||||||||||||||||    
T  33820363 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctctt 33820409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 35037635 - 35037601
Alignment:
Q  342 aaaagggttgtacaaatatcatttctcttgtttta 376  Q
    |||| ||||||||||||||||||||||||||||||    
T  35037635 aaaatggttgtacaaatatcatttctcttgtttta 35037601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 42516694 - 42516648
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||||    
T  42516694 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctctt 42516648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 44170646 - 44170692
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||| | | |||| ||||||||||||||||||||||||    
T  44170646 ttgtcaaaaaattataacaaaatggttgtacaaatatcatttctctt 44170692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 48743754 - 48743708
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| |||  ||||||||||||||||||| ||||    
T  48743754 ttgtcaaaaaattgttaaaaattggttgtacaaatatcatttttctt 48743708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 49768896 - 49768942
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||  |||| || |||||||||||||||||||||    
T  49768896 ttgtcaaaaaattgttgcaaaatggatgtacaaatatcatttctctt 49768942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 51389360 - 51389314
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||||||||  ||| | ||||||||||||||||||||||    
T  51389360 ttgtcaaaaaattgttactaaatgattgtacaaatatcatttctctt 51389314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 51397898 - 51397944
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||||    
T  51397898 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctctt 51397944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 55595993 - 55595947
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||||    
T  55595993 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctctt 55595947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 9472540 - 9472585
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  9472540 ttgtcaaaaaattattagaaaatagttgtacaaatatcatttctct 9472585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 10994179 - 10994224
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||| ||||| | |||| |||||||||||||||||||||||    
T  10994179 ttgtcaaaagattgtcacaaaatggttgtacaaatatcatttctct 10994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 11012185 - 11012140
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||| ||||| |||| |||||| |||||||||||||||||||||||    
T  11012185 ttgttaaaaagttgtcataaaatggttgtacaaatatcatttctct 11012140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 18944438 - 18944389
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaaca 264  Q
    ||||||||||||||||||||||| |  ||| |||| ||||||||||||||    
T  18944438 acaacttttgggacaaccttattgtgttctcttcttattggtcaaaaaca 18944389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 20760252 - 20760301
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaac 231  Q
    |||||| ||| ||||||||||||| |||||| ||||||||||| ||||||    
T  20760252 aaagagaaatgatatttgtacaattattttttaacaacttttgtgacaac 20760301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 20766643 - 20766692
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaac 231  Q
    |||||| ||| ||||||||||||| |||||| ||||||||||| ||||||    
T  20766643 aaagagaaatgatatttgtacaattattttttaacaacttttgtgacaac 20766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 24310405 - 24310490
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||| ||||||| |||||  ||||   |||||||||||||||||||| || |  |||||| | ||| ||||||||||||    
T  24310405 aaaagagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctttttttattagtcaaaaacaat 24310490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 29407058 - 29407103
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctcttgttt 374  Q
    ||||| |||||| |||| |||||||||||||||||||||| |||||    
T  29407058 aaaaacttgttagaaaatggttgtacaaatatcatttctcatgttt 29407103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 40308485 - 40308444
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||||||||||| |||||||| | |||||||||||||||||    
T  40308485 ttgtcaaaaaattattataaaatgattgtacaaatatcattt 40308444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 43759178 - 43759219
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||||||||||||||| |||| |||||||||||||| ||||    
T  43759178 ttgtcaaaaaattgttagaaaatggttgtacaaatattattt 43759219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 46364006 - 46364047
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||||||||||||||| |||| ||||||||| |||||||||    
T  46364006 ttgtcaaaaaattgttagaaaatggttgtacagatatcattt 46364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 52636425 - 52636344
Alignment:
Q  186 agtaataatatttgtacaatcatttttaaacaacttttgggacaacctt-attattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||| ||||||||||   ||||| ||||| |||||||||  || || ||| || ||||||||||||||||||    
T  52636425 agtaataatatttgaacaatcatttgataacaaattttgtgacaaccttgttttttctctcttgtcattggtcaaaaacaat 52636344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 169529 - 169573
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| | |||| ||||||||||||||||||||||    
T  169529 ttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 12297425 - 12297393
Alignment:
Q  186 agtaataatatttgtacaatcatttttaaacaa 218  Q
    |||||||||||||||||||||||||||| ||||    
T  12297425 agtaataatatttgtacaatcatttttagacaa 12297393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 20118819 - 20118779
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| ||||||||||| |||||| |||||||||||||||||    
T  20118819 aaaagttgttataaaatggttgttcaaatatcatttctctt 20118779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 24772715 - 24772671
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| |||||| || |||||||||||||||||||    
T  24772715 ttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 24772671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 25725721 - 25725765
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||    
T  25725721 ttgtcaaaaagttgttagaaagtggttgtacaaatatcatttctc 25725765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 28203436 - 28203392
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||||    
T  28203436 ttgtcaaaaaattattacaaaatgattgtacaaatatcatttctc 28203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 371
Target Start/End: Complemental strand, 29525899 - 29525855
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctcttg 371  Q
    ||||||| |||| |||||| |||||||||||||||||||| ||||    
T  29525899 tcaaaaagttgtaataaaatggttgtacaaatatcatttcacttg 29525855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 35824133 - 35824177
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||    
T  35824133 ttgtccaaaagttgttaaaaaatggttgtacaaatatcatttctc 35824177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 39881057 - 39881101
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||| | ||||||||||||||||||||    
T  39881057 ttgtcaaaaagttgttagaaaatgattgtacaaatatcatttctc 39881101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 40721991 - 40722035
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| ||||||| |||||||| || |||||||||||||||||||    
T  40721991 ttgtccaaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 43168746 - 43168786
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| | |||| |||||||||||||||||||||||    
T  43168746 aaaaaattgtcacaaaatggttgtacaaatatcatttctct 43168786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 44250254 - 44250298
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| || | |||||||||||||||||    
T  44250254 ttgtcaaaaaattgttacaaaatggatatacaaatatcatttctc 44250298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 46912826 - 46912870
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||    
T  46912826 ttgttaaaaaattgtaataaagtggttgtacaaatatcatttctc 46912870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 51389101 - 51389145
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||    
T  51389101 ttgtcaaaaagttgttacaaagtggttgtacaaatatcatttctc 51389145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 53357104 - 53357148
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||    
T  53357104 ttgtcaaaaaattgttagaaaatagttatacaaatatcatttctc 53357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 53662461 - 53662501
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  53662461 aaaaattgttacaaaatagttgtacaaatatcatttctctt 53662501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 3919481 - 3919400
Alignment:
Q  185 gagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  3919481 gagtaatgatatttgtacaaccctttttaaacaatttttgggacaactttattattctcttctctcattggtcaaaaacaat 3919400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 39815530 - 39815452
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaa 262  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||   | ||||||||| |||| ||||||||||||||||    
T  39815530 aaaagagtaatgatatttgtacaaccctttttaaacaacttttggg---atcttattattctcttctctcattggtcaaaaa 39815452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 49596279 - 49596233
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  49596279 ttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctctt 49596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 30973590 - 30973550
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  30973590 aaaaattgttagaaaagggttgtacaaatatcatttctctt 30973550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 37947138 - 37947189
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||||||    
T  37947138 acaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaat 37947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 43755705 - 43755751
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||    
T  43755705 ttgtcaaaaaattatcataaaatggttgtacaaatatcatttctctt 43755751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 44112498 - 44112452
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  44112498 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 44112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 45042305 - 45042259
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  45042305 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 45042259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 52233248 - 52233294
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||    
T  52233248 ttgtcaaaaaattgtgagaaaatggttgtacaaatatcatttctctt 52233294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 8577422 - 8577471
Alignment:
Q  217 aacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||||||| || || ||| |||||||||||||||||||||    
T  8577422 aacttttgggacaaccttgttgttctctattctcattggtcaaaaacaat 8577471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 18541078 - 18541123
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  18541078 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctct 18541123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 30439294 - 30439249
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||    
T  30439294 ttgtcaaaaaattgtcataaattggttgtacaaatatcatttctct 30439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 39669850 - 39669805
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||    
T  39669850 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctct 39669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 44641930 - 44641975
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||    
T  44641930 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctct 44641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 51193158 - 51193203
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||    
T  51193158 ttgtccaaaaattgttataaaatggatgtacaaatatcatttctct 51193203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 30505363 - 30505407
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||    
T  30505363 ttgtcaaaaaattgttagaaattggttgtacaaatatcatttctc 30505407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 369
Target Start/End: Complemental strand, 1689429 - 1689390
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  1689429 aaaaattgttataaaatagttgtacaaatatcatttctct 1689390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 3919443 - 3919490
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctcttgttttat 377  Q
    ||||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  3919443 aaaaattgtttaaaaagggttgtacaaatatcattactcatgttttat 3919490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 7420819 - 7420736
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||| ||||||||||||| ||||    ||||||||| ||||||| || || || |||||||| ||||||||| ||||||    
T  7420819 aagagtaatgatatttgtacaattatttcgtgacaacttttaggacaacttttttcttctcttttcttattggtcaagaacaat 7420736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 367
Target Start/End: Complemental strand, 11068469 - 11068426
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  11068469 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 11068426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 371
Target Start/End: Original strand, 44672057 - 44672104
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttg 371  Q
    |||||||||| |||||| |||| | |||||||||||||||||||||||    
T  44672057 ttgtcaaaaagttgttaaaaaatgattgtacaaatatcatttctcttg 44672104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 48678983 - 48679026
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||| |||||| | ||||||||||||||||||||||    
T  48678983 tcaaaaaattgtcataaaatgattgtacaaatatcatttctctt 48679026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 7423197 - 7423116
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| | |||||| |||||  |||||||| ||||||||| |||||||||  | || |||||||| ||||||||||||||||    
T  7423197 agagtagtgatatttatacaactatttttaa-caacttttgtgacaaccttccttttctcttttcttattggtcaaaaacaat 7423116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 12708134 - 12708088
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| |||| |||||||||||||||||||    
T  12708134 ttgtcaaaaagttgttagaaaatggttctacaaatatcatttctctt 12708088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 12713588 - 12713542
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| |||| |||||||||||||||||||    
T  12713588 ttgtcaaaaagttgttagaaaatggttctacaaatatcatttctctt 12713542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 12717679 - 12717633
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||| |||| |||||||||||||||||||    
T  12717679 ttgtcaaaaagttgttagaaaatggttctacaaatatcatttctctt 12717633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 29094635 - 29094717
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| ||||||| ||||   |||| | ||||||||||||||||||||||| |  ||| |||| ||||||||||| ||||    
T  29094635 agagtaatgatatttgaacaactcttttgatacaacttttgggacaaccttattgtgttctcttcttattggtcaaaatcaat 29094717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 47386832 - 47386866
Alignment:
Q  335 ttgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||| |||||||||||||||||||||||    
T  47386832 ttgttataaaatggttgtacaaatatcatttctct 47386866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 49931561 - 49931599
Alignment:
Q  193 atatttgtacaatcatttttaaacaacttttgggacaac 231  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  49931561 atatttgtacaatcattttttaacaacttttgtgacaac 49931599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 20268540 - 20268581
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    |||| |||||||||||||||||  ||||||||||||||||||    
T  20268540 ttgttaaaaaattgttataaaatagttgtacaaatatcattt 20268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 25989011 - 25989056
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||| |||| |||||| |||| |||||||||||||||||||||||    
T  25989011 ttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctct 25989056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 27810274 - 27810319
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||  |||||||||||||||||||||||    
T  27810274 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctct 27810319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 29632478 - 29632425
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgttttat 377  Q
    ||||||||||||||||| ||||    ||||||||||||||||||||| ||||||    
T  29632478 ttgtcaaaaaattgttacaaaataaatgtacaaatatcatttctctttttttat 29632425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 36690599 - 36690644
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| | |||  |||||||||||||||||||||||    
T  36690599 ttgtcaaaaaattgtgagaaattggttgtacaaatatcatttctct 36690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 36706700 - 36706745
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| | |||  |||||||||||||||||||||||    
T  36706700 ttgtcaaaaaattgtgagaaattggttgtacaaatatcatttctct 36706745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 36794790 - 36794717
Alignment:
Q  193 atatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||  |||| |||||| |||||| ||||| || ||||| ||| || || |||||||||||||||    
T  36794790 atatttgtacaatttttttgaaacaatttttggaacaactttgttattctctcttttcgttggtcaaaaacaat 36794717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 50017450 - 50017495
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||| ||||||  ||||||||||||||||||||||    
T  50017450 ttgtcaaaaagttgtaataaaattgttgtacaaatatcatttctct 50017495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 836024 - 835980
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaa 259  Q
    |||||||||||||||| ||| ||||| ||| ||||||||||||||    
T  836024 acaacttttgggacaatcttgttattttctcttctcattggtcaa 835980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 3606121 - 3606165
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||    
T  3606121 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 3606165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 5315255 - 5315211
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||    
T  5315255 ttgtcaaaaaattataataaagaggttgtacaaatatcatttctc 5315211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 8464540 - 8464584
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||    
T  8464540 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 8464584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 9445152 - 9445108
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||| |||||||| |||||||||||||    
T  9445152 ttgtcaaaaagttgttacaaaatggttgtacgaatatcatttctc 9445108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 11947833 - 11947793
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||| |||||| ||||||||||||||||||||||||    
T  11947833 aaaagttgtcataaaatggttgtacaaatatcatttctctt 11947793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 13411954 - 13411998
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| |||||||| |||| ||||||||| |||||||    
T  13411954 ttgtcaaaaaattcttataaaatggttatacaaatataatttctc 13411998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 15182610 - 15182662
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttta 376  Q
    |||||||||| |||||| ||||  |||||||||||||||||||| || |||||    
T  15182610 ttgtcaaaaagttgttagaaaatagttgtacaaatatcatttcttttttttta 15182662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 18959048 - 18958996
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttta 376  Q
    |||||||||| |||| | |||| ||||||| ||||||||||||| ||||||||    
T  18959048 ttgtcaaaaagttgtaacaaaatggttgtataaatatcatttcttttgtttta 18958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 21433434 - 21433474
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  21433434 aaaagttgttacaaaatggttgtacaaatatcatttctctt 21433474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 30535989 - 30536037
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaac 231  Q
    ||||| ||| |||||||||||||||||||| ||||| ||||| ||||||    
T  30535989 aagagaaatgatatttgtacaatcattttttaacaatttttgtgacaac 30536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 30536029 - 30535989
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| |||| | ||||||||||||||||||||||    
T  30536029 aaaaattgttaaaaaatgattgtacaaatatcatttctctt 30535989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 31184325 - 31184281
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||| ||||| |||| |||||| ||||||||||||||||||||||    
T  31184325 ttgttaaaaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 31244620 - 31244704
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| ||| ||||||| ||||  |||||   ||||| |||||||||||| | || || ||| |||||||||||||||||||||    
T  31244620 aaagagcaatgatatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtcaaaaacaat 31244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 42615904 - 42615860
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||||    
T  42615904 ttgtcaaaaaattattaaaaaatgattgtacaaatatcatttctc 42615860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 44672103 - 44672063
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaactttt 223  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  44672103 aagagaaatgatatttgtacaatcattttttaacaactttt 44672063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 375
Target Start/End: Original strand, 45272199 - 45272227
Alignment:
Q  347 ggttgtacaaatatcatttctcttgtttt 375  Q
    |||||||||||||||||||||||||||||    
T  45272199 ggttgtacaaatatcatttctcttgtttt 45272227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 45470867 - 45470911
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| ||||   ||||||||||||||||||||||    
T  45470867 ttgtcaaaaaattgtaataaggtggttgtacaaatatcatttctc 45470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 46948025 - 46947981
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| |||||| || |||||||||||||||||||    
T  46948025 ttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 46947981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 49621407 - 49621363
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||    
T  49621407 ttgtctaaaaattattacaaaatggttgtacaaatatcatttctc 49621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 49699779 - 49699823
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||    
T  49699779 ttgttaaaaaattatcataaaatggttgtacaaatatcatttctc 49699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 51250302 - 51250346
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||| |||  ||||| ||||||||||||||||||||||    
T  51250302 ttgtcaaaaaactgtattaaaatggttgtacaaatatcatttctc 51250346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 375
Target Start/End: Complemental strand, 2005773 - 2005725
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2005773 tcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 2005725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 7295651 - 7295569
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| ||||||||||||   |||| | ||||||||||| |||||||| ||||| ||| |||||||||||||||||||||    
T  7295651 agagtaatgatatttgtacaacttttttgagacaacttttggaacaaccttgttattctctcttctcattggtcaaaaacaat 7295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 33212086 - 33212042
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  33212086 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 33212042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 25940659 - 25940704
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||    
T  25940659 ttgtctaaaaattgttacaaaatggttgtacaaatatcatttctct 25940704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 39369343 - 39369302
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  39369343 tcaaaaagttgttacaaaagggttgtacaaatatcatttctc 39369302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 46829517 - 46829477
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  46829517 aaaaattgttacaaaatggttgtacaaatatcatttctctt 46829477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 367
Target Start/End: Complemental strand, 2790221 - 2790178
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    ||||||||||||||||| |||  |||||||||||||||||||||    
T  2790221 ttgtcaaaaaattgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 365
Target Start/End: Complemental strand, 6269404 - 6269369
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcattt 365  Q
    |||||||||||||||| |||||||||||||||||||    
T  6269404 aaaaattgttataaaatggttgtacaaatatcattt 6269369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 23034231 - 23034282
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||||||||| || |  |||||||| ||||||||||||||||    
T  23034231 acaacttttgggacaaccttgttgtgctcttttcttattggtcaaaaacaat 23034282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 38096466 - 38096517
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    ||||||||||||||| | |||| |||||||||||||| ||||||||| ||||    
T  38096466 ttgtcaaaaaattgtcacaaaatggttgtacaaatattatttctcttttttt 38096517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 41590558 - 41590593
Alignment:
Q  335 ttgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41590558 ttgttataaaatggttgtacaaatatcatttctctt 41590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 42276132 - 42276089
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||||| ||||  |||||||||||||||||||||||    
T  42276132 tcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 42276089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 44185329 - 44185278
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||| |||||||| ||| || ||| |||||||||||||||||||||    
T  44185329 acaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaat 44185278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 9055311 - 9055265
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||||    
T  9055311 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctctt 9055265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 16567360 - 16567314
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| || | |||||| ||||||||||||||||||||||||    
T  16567360 ttgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16567314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 16598302 - 16598348
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| || | |||||| ||||||||||||||||||||||||    
T  16598302 ttgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16598348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 27331054 - 27331100
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  27331054 ttgtcaaaaaattgttagaaaatagttatacaaatatcatttctctt 27331100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 27866459 - 27866505
Alignment:
Q  219 cttttgggacaaccttattattatcttttctcattggtcaaaaacaa 265  Q
    ||||||||||||||||||| || ||| |||||||||| |||||||||    
T  27866459 cttttgggacaaccttattgttctctcttctcattggccaaaaacaa 27866505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 36920847 - 36920802
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36920847 ttgtcaaaaaattgtta-aaaatggtagtacaaatatcatttctctt 36920802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 41966376 - 41966330
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||    
T  41966376 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 41966330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 6822554 - 6822595
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| |||||| |||| ||||||||||||||||||||||||    
T  6822554 aaaaagttgttagaaaatggttgtacaaatatcatttctctt 6822595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 9363385 - 9363438
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttat 236  Q
    ||||| ||| |||||||||||||||||||  ||||||||||| |||||| ||||    
T  9363385 aagagaaatgatatttgtacaatcattttataacaacttttgtgacaactttat 9363438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 19426624 - 19426579
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||    
T  19426624 ttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctct 19426579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 27075514 - 27075469
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||| ||||| |||| |||| ||||||||||||||||||    
T  27075514 ttgtcaaaaaactgttaaaaaatggttatacaaatatcatttctct 27075469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 27202797 - 27202842
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||| ||||| |||| |||| ||||||||||||||||||    
T  27202797 ttgtcaaaaaactgttaaaaaatggttatacaaatatcatttctct 27202842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Original strand, 48383351 - 48383388
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  48383351 aaaaattgtaataaaatggttgtacaaatatcatttct 48383388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 370
Target Start/End: Original strand, 1838477 - 1838505
Alignment:
Q  342 aaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||||||||||||||||||||    
T  1838477 aaaagggttgtacaaatatcatttctctt 1838505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 9363425 - 9363385
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  9363425 aaaagttgttataaaatgattgtacaaatatcatttctctt 9363385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 23329946 - 23329902
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| | |||||| |||||||||||| |||||||||    
T  23329946 ttgtcaaaaaattataataaaatggttgtacaaatgtcatttctc 23329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 28081809 - 28081853
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||| |||||||| ||| |||| ||||||||||||||||||||||    
T  28081809 ttgtaaaaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 31364911 - 31364955
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||||    
T  31364911 ttgtcaaaaaattgtaataaagtggtcgtacaaatatcatttctc 31364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 32044824 - 32044780
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||| |||||||||||| |||||  ||||||||||||||||||||    
T  32044824 ttgttaaaaaattgttacaaaagaattgtacaaatatcatttctc 32044780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 35823008 - 35823048
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  35823008 aaaaattgttagaaaatggatgtacaaatatcatttctctt 35823048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 40212516 - 40212560
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||  |||||||||||||| |||||||    
T  40212516 ttgtcaaaaaattgttagaaagtggttgtacaaatattatttctc 40212560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 42467247 - 42467203
Alignment:
Q  325 tgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||| ||||||| ||| |||| |||||||||||||||||||||||    
T  42467247 tgtctaaaaattattaaaaaatggttgtacaaatatcatttctct 42467203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 42476572 - 42476616
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| ||||||||||| ||||  |||||||||||||||||||||    
T  42476572 ttgtccaaaaattgttagaaaaatgttgtacaaatatcatttctc 42476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 34247957 - 34247876
Alignment:
Q  185 gagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||| |||||||||||| | |||| | |||||||||||||||||||| || || ||| || ||||||||||||||||||    
T  34247957 gagtaatgatatttgtacaacccttttgagacaacttttgggacaaccttgttgttctctcttttcattggtcaaaaacaat 34247876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 20473823 - 20473779
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  20473823 ttgtcaaaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 1422593 - 1422671
Alignment:
Q  188 taataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||| ||||||| ||||  ||||| | |||||||||||||||||||| ||||| | |||| ||||||||||||||||||    
T  1422593 taatgatatttgaacaactattttgatacaacttttgggacaaccttgttattctattttttcattggtcaaaaacaat 1422671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 1332495 - 1332540
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  1332495 ttgtcaaaaaattgttataaaatggttgtacaattatcatttctct 1332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 31806343 - 31806299
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  31806343 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 31806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 27630941 - 27630895
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||    
T  27630941 ttgtcaaaaaattgtcataaaatggatgtacaaatatcatttctctt 27630895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 34996387 - 34996433
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  34996387 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 34996433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 35818981 - 35818935
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||    
T  35818981 ttgtcaaaaaattgttagaaaatggttgtgcaaatatcatttctctt 35818935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 20996223 - 20996178
Alignment:
Q  180 aaaaagagtaataatatttgtacaatcatttttaaacaacttttgg 225  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||    
T  20996223 aaaaagagaaatgatatttgtacaatcatttttgaacaacttttgg 20996178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 34970251 - 34970206
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||    
T  34970251 ttgtcaaaaagttgttacaaaaggattgtacaaatatcatttctct 34970206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 9305886 - 9305966
Alignment:
Q  186 agtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| ||||||||||||||  ||| | |||||||||| |||||||||  |||| ||| || |||||| |||||||||||    
T  9305886 agtaatgatatttgtacaatccatttgagacaacttttgagacaaccttgatattctctcttttcattgatcaaaaacaat 9305966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 32234369 - 32234421
Alignment:
Q  214 aacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||| |||||||||| ||||| ||| |||||||||||||| ||||||    
T  32234369 aacaacttttaggacaacctttttattctctcttctcattggtcaataacaat 32234421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 43873718 - 43873762
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||    
T  43873718 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 43873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 2768191 - 2768140
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    |||||||||| || | |||||| |||||||||||||||||||||||| ||||    
T  2768191 ttgtcaaaaagttatcataaaacggttgtacaaatatcatttctcttatttt 2768140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 3950151 - 3950108
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| | |||||| ||||||||||||||||||||||||    
T  3950151 tcaaaaaattataataaaatggttgtacaaatatcatttctctt 3950108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 5925093 - 5925046
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctcttgttttat 377  Q
    |||||||||||||||| || ||||| ||||||||||||| ||||||||    
T  5925093 aaaaattgttataaaatggatgtacgaatatcatttctcatgttttat 5925046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 33511786 - 33511703
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||| ||||||||||||  |||||   | ||||||||||||||| || || || ||| |||| ||||||||||||||||    
T  33511786 aagagtaatgatatttgtacaactattttgtgaaaacttttgggacaacattcttcttctctcttcttattggtcaaaaacaat 33511703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 8233383 - 8233465
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| ||||||| |||   ||||||  ||||||||| ||| |||||| || || ||| |||||||||||||||||||||    
T  8233383 agagtaatgatatttgaacatctatttttgtacaactttttggataaccttgttgttctctcttctcattggtcaaaaacaat 8233465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 9738720 - 9738766
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||    
T  9738720 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttctctt 9738766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 10553110 - 10553160
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgttt 374  Q
    ||||||||||||||| | |||  |||||||||||||||||||||| |||||    
T  10553110 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctcatgttt 10553160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 12959982 - 12959936
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| |||  |||||| |||||||||||||||||    
T  12959982 ttgtcaaaaaattgttagaaattggttgtgcaaatatcatttctctt 12959936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 40719670 - 40719716
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||  |||||| |||| ||||||||||||||||||||||||    
T  40719670 ttgtcaaaaggttgttagaaaatggttgtacaaatatcatttctctt 40719716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 41305009 - 41305055
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||| |||||||| |||||  ||||||||||||||||||||||||    
T  41305009 ttgtcataaaattgtaataaagtggttgtacaaatatcatttctctt 41305055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 41776363 - 41776277
Alignment:
Q  180 aaaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||| ||||||| ||||   ||||   |||||||||||||||||||| || |  ||| || ||||||||||||||||||    
T  41776363 aaaaagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaat 41776277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 3155881 - 3155836
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    |||| |||||| |||  |||||||||||||||||||||||||||||    
T  3155881 aaaagttgttaaaaagtggttgtacaaatatcatttctcttgtttt 3155836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 3988949 - 3988904
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||  |||||||||||||||||||||||    
T  3988949 ttgtcaaaaatttgttagaaagtggttgtacaaatatcatttctct 3988904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 6161992 - 6161947
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||  |||| |||||| |||||||||||||||||||||||    
T  6161992 ttgtcaaaaggttgtcataaaatggttgtacaaatatcatttctct 6161947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 8074751 - 8074796
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||| |||||||||| |||||  |||||||||||||||||||||||    
T  8074751 ttgttaaaaaattgtcataaagtggttgtacaaatatcatttctct 8074796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 9048343 - 9048388
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| |||||| |||| |||| ||||||||||||||||||    
T  9048343 ttgtcaaaaagttgttagaaaatggttatacaaatatcatttctct 9048388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 29107991 - 29108032
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttt 222  Q
    ||||||| ||| |||||||||||||||||||| |||||||||    
T  29107991 aaaagagaaatgatatttgtacaatcattttttaacaacttt 29108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 38504214 - 38504169
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||||||||   |||| |||||||||||||||||||||||    
T  38504214 ttgtcaaaaaattgtagcaaaatggttgtacaaatatcatttctct 38504169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 41639820 - 41639861
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||| |||| || |||||||||||||||||||||    
T  41639820 aaaaaattgttagaaaatggatgtacaaatatcatttctctt 41639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 67194 - 67234
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  67194 aaaagttgttagaaaatggttgtacaaatatcatttctctt 67234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 2261481 - 2261521
Alignment:
Q  193 atatttgtacaatcatttttaaacaacttttgggacaacct 233  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  2261481 atatttgtacaatcattttttaataacttttgtgacaacct 2261521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 3775898 - 3775942
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| ||| |||| ||||||||||||||| ||||||    
T  3775898 ttgtcaaaaaattattacaaaatggttgtacaaatatcctttctc 3775942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 11584134 - 11584094
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  11584134 aaaaattgtaagaaaatggttgtacaaatatcatttctctt 11584094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 12655952 - 12655920
Alignment:
Q  338 ttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||| ||||||||||||||||||||||||    
T  12655952 ttataaaatggttgtacaaatatcatttctctt 12655920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 12659096 - 12659052
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||    
T  12659096 ttgtcaaaaagttgttaaaaattggttgtacaaatatcatttctc 12659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 14548850 - 14548894
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||    
T  14548850 ttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 14548894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 20852963 - 20852919
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| ||||||| | |||||| ||||||||||||||||||||||    
T  20852963 ttgtctaaaaattatcataaaatggttgtacaaatatcatttctc 20852919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 22767176 - 22767132
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| | |||| ||||||||||||||||||||||    
T  22767176 ttgtcaaaaagttgtgagaaaatggttgtacaaatatcatttctc 22767132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 30943866 - 30943910
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||    
T  30943866 ttgtcaaaaagttgttaaaaattggttgtacaaatatcatttctc 30943910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 33100502 - 33100542
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| ||||||||||| |||||| |||||||||||||||||    
T  33100502 aaaagttgttataaaatggttgttcaaatatcatttctctt 33100542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 34494668 - 34494708
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    |||||||||||||| ||||  ||||||||||||||||||||    
T  34494668 tcaaaaaattgttagaaaatagttgtacaaatatcatttct 34494708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 35792067 - 35792115
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaac 231  Q
    ||||| ||| |||||||||||||||||||| || |||||||| ||||||    
T  35792067 aagagaaatgatatttgtacaatcattttttaaaaacttttgtgacaac 35792115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 35937539 - 35937583
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||    
T  35937539 ttgtccaaaagttgttacaaaatggttgtacaaatatcatttctc 35937583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 39153709 - 39153753
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| ||||  || ||||||||||||||||||    
T  39153709 ttgtcaaaaaattgttagaaaattgtggtacaaatatcatttctc 39153753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 40608557 - 40608513
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||  | ||||||||||||||||||||    
T  40608557 ttgtcaaaaaattgttagaaattgattgtacaaatatcatttctc 40608513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 42651106 - 42651022
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||| |||| ||||||| ||||  |||||   |||||||||| ||||||||| || || ||| ||||||||||| |||||||||    
T  42651106 aaagaataatgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattggttaaaaacaat 42651022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 43597800 - 43597768
Alignment:
Q  191 taatatttgtacaatcatttttaaacaactttt 223  Q
    |||||||| ||||||||||||||||||||||||    
T  43597800 taatatttatacaatcatttttaaacaactttt 43597768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 45405720 - 45405804
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| | ||||||  |||| ||||||   ||||| |||| |||||| ||||| || ||| |||||||||||||||||||||    
T  45405720 aaagagtagtgatattttaacaaccattttggtacaacctttgagacaactttattgttctctcttctcattggtcaaaaacaat 45405804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 12612906 - 12612986
Alignment:
Q  186 agtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| ||||||| |||| ||||||   |||||||||||||||||||| || || ||| |||||||||||||||||||||    
T  12612906 agtaatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaat 12612986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 31708414 - 31708370
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  31708414 ttgtcaaaaagttgttataaaatggttgtacaaatatcatttctc 31708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 36416089 - 36416133
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  36416089 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 36416133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 17574107 - 17574193
Alignment:
Q  180 aaaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||| ||||||| ||||  |||||   |||||||||||||||||||| || || | | |||||| ||||||||||||||    
T  17574107 aaaaagagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgttctttcttctcactggtcaaaaacaat 17574193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 38500987 - 38500941
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||    
T  38500987 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctctt 38500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 2050971 - 2050926
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||    
T  2050971 ttgtccaaaaattgttacaaaatggttgtacaaatatcatttctct 2050926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 20125433 - 20125389
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  20125433 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctc 20125389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 5043075 - 5043028
Alignment:
Q  218 acttttgggacaaccttattattatcttttctcattggtcaaaaacaa 265  Q
    ||||||||||||||||| || || ||| ||||||||||||||||||||    
T  5043075 acttttgggacaaccttgttgttctctcttctcattggtcaaaaacaa 5043028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 6940183 - 6940222
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  6940183 aaaaattattataaaatggttgtacaaatatcatttctct 6940222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 24463258 - 24463301
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||    
T  24463258 ttgtcaaaaaattgttacaaaatggttgtacaaatataatttct 24463301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 5996711 - 5996665
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  5996711 ttgtctaaaaattgttaaaaaatagttgtacaaatatcatttctctt 5996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 18638852 - 18638898
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| |||||| |||||| |||||||||||||||||    
T  18638852 ttgtcaaaaagttgtaataaaatggttgtgcaaatatcatttctctt 18638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 33743360 - 33743406
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  33743360 ttgtcaaaaaattgtaataaagtggttatacaaatatcatttctctt 33743406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 368
Target Start/End: Original strand, 38293392 - 38293430
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  38293392 aaaaattgttataaaatggttgtaaaaatatcatttctc 38293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 372420 - 372457
Alignment:
Q  333 aattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  372420 aattattataaaatggttgtacaaatatcatttctctt 372457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 2456070 - 2456025
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||||||||||  |||||| | |||||||||||||    
T  2456070 ttgtcaaaaaattgttataaaatagttgtatagatatcatttctct 2456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 4434521 - 4434480
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  4434521 aaaaaattgtcaaaaaatggttgtacaaatatcatttctctt 4434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 6758824 - 6758869
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    ||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  6758824 aaaaattgttagaaaatggttgtacatatatcatttctcttttttt 6758869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 8897426 - 8897381
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||  |||| |||||| |||||||||||||||||||||||    
T  8897426 ttgtcaaaaggttgtcataaaatggttgtacaaatatcatttctct 8897381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 29807029 - 29807074
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||| ||||||| |||| |||||||||||| ||||||||||    
T  29807029 ttgtcaaaagattgttaaaaaatggttgtacaaatgtcatttctct 29807074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 6529063 - 6529019
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| ||||   ||||||||||||||||||||    
T  6529063 ttgtcaaaaaattgttagaaaataattgtacaaatatcatttctc 6529019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 15529832 - 15529876
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||||||||  ||||||| ||||| |||||||    
T  15529832 ttgtcaaaaaattgttataaaatagttgtactaatattatttctc 15529876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 21012606 - 21012566
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||| |||||| |||||||||||||| |||||||||    
T  21012606 aaaaattgtcataaaatggttgtacaaatataatttctctt 21012566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 32873176 - 32873220
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||    
T  32873176 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 32873220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 60513 - 60466
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttg 371  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||    
T  60513 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcttg 60466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 48840 - 48756
Alignment:
Q  182 aaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||| ||||||| |||||  |||| | |||| ||||||||||||||| || |  ||| |||| ||||||||||||||||    
T  48840 aaagagtaatgatatttgaacaattcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 48756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 34442157 - 34442106
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    ||||||||||||| | |||||  |||||||||||||||||||||||||||||    
T  34442157 ttgtcaaaaaattatcataaagtggttgtacaaatatcatttctcttgtttt 34442106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 43994040 - 43994091
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||| ||||    
T  43994040 ttgtcaaaaaattgtcataaaatggttgtacaactatcatttctcttctttt 43994091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 7498018 - 7498064
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||||    
T  7498018 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 7498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 10749706 - 10749752
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  10749706 ttgtcaaaagattgtcataaaatggttgtacaaatatcatttctctt 10749752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 35518459 - 35518377
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| ||||||| ||||  ||||| | ||||||||||||||||| || || || ||| |||| ||||||||||||||||    
T  35518459 agagtaatgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtcaaaaacaat 35518377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 11442716 - 11442671
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||    
T  11442716 ttgtcaaaaaattgtaatgaaatggttgtacaaatatcatttctct 11442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 694317 - 694273
Alignment:
Q  331 aaaattgttataaaagggttgtacaaatatcatttctcttgtttt 375  Q
    |||||||| | |||| |||||||||||||||||||||||||||||    
T  694317 aaaattgtcaaaaaatggttgtacaaatatcatttctcttgtttt 694273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 11980695 - 11980651
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  11980695 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 11980651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 31635837 - 31635881
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  31635837 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 31635881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 33857261 - 33857217
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||    
T  33857261 ttgtcaaaaaattgttagaaaaagattgtacaaatatcatttctc 33857217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 9202543 - 9202586
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttct 367  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||    
T  9202543 ttgtcaaaaaattgtcataaaatggttgtagaaatatcatttct 9202586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 14499057 - 14499096
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  14499057 aaaaattgttataaaatggttgtacaaatatcaattctct 14499096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 16447276 - 16447319
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||    
T  16447276 tcaaaaaattgtaataaaatggttgtacaaatatcatttttctt 16447319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 23141507 - 23141460
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaa 262  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||    
T  23141507 acaacttttgggacaaccttgttgttctctcttctcattggtcaaaaa 23141460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 23553297 - 23553250
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaa 262  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||    
T  23553297 acaacttttgggacaaccttgttgttctctcttctcattggtcaaaaa 23553250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 28508477 - 28508528
Alignment:
Q  183 aagagtaataatatttgtacaatcatttttaaacaacttttgggacaacctt 234  Q
    ||||||||| |||||||||||| ||||||   ||||||||||||||||||||    
T  28508477 aagagtaatgatatttgtacaaccattttgtgacaacttttgggacaacctt 28508528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 30340147 - 30340100
Alignment:
Q  215 acaacttttgggacaaccttattattatcttttctcattggtcaaaaa 262  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||    
T  30340147 acaacttttgggacaaccttgttgttctctcttctcattggtcaaaaa 30340100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 44484689 - 44484728
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  44484689 aaaaattgttacaaaatggttgtacaaatatcatttctct 44484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 1052523 - 1052569
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||||    
T  1052523 ttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 1052569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 1889191 - 1889145
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||    
T  1889191 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctctt 1889145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 2013312 - 2013358
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||| |  |||||||||||||||||||||    
T  2013312 ttgtcaaaaaattgtcataaaatgaatgtacaaatatcatttctctt 2013358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 4114352 - 4114394
Alignment:
Q  217 aacttttgggacaaccttattattatcttttctcattggtcaa 259  Q
    |||||||| ||||||||||||||| |||||| |||||||||||    
T  4114352 aacttttgagacaaccttattattctcttttttcattggtcaa 4114394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 371
Target Start/End: Complemental strand, 6666059 - 6666017
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctcttg 371  Q
    ||||| |||| |||||| |||||||||||||||||||||||||    
T  6666059 aaaaagttgtaataaaatggttgtacaaatatcatttctcttg 6666017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 8757728 - 8757646
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| ||||||| ||||  |||||   ||||||||||| |||||||| || || ||| |||| ||||||||||||||||    
T  8757728 agagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaat 8757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 368
Target Start/End: Original strand, 12784432 - 12784470
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  12784432 aaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 13466102 - 13466148
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||||||||| |||  ||||||||||||||||||||||||    
T  13466102 ttgttaaaaaattgttagaaattggttgtacaaatatcatttctctt 13466148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 14797677 - 14797723
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||||    
T  14797677 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttctctt 14797723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 22296016 - 22296098
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||||||||||| ||||   |||||  |||| ||||||||||||||| || |  |||||| ||||||||||||| ||||    
T  22296016 agagtaataatatttgaacaactttttttctacaatttttgggacaaccttgttgtgctcttttttcattggtcaaaatcaat 22296098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 35965619 - 35965573
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  35965619 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttttctt 35965573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 3366182 - 3366133
Alignment:
Q  217 aacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||||| ||||||||||||||| | | |||||||||||||| ||||||    
T  3366182 aacttttgtgacaaccttattattctttcttctcattggtcaataacaat 3366133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 6365230 - 6365185
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| | |||  |||||||||||||||||||||||    
T  6365230 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctct 6365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 6742294 - 6742375
Alignment:
Q  181 aaaagagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttattattatcttttctcattggtcaaaaa 262  Q
    ||||||||||| ||| |||||||||||||| |  |||||||||| ||||| ||| ||  | ||| |||| ||||||||||||    
T  6742294 aaaagagtaatgataattgtacaatcatttgttgacaacttttgtgacaatcttctttctctctcttcttattggtcaaaaa 6742375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 11175143 - 11175180
Alignment:
Q  193 atatttgtacaatcatttttaaacaacttttgggacaa 230  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  11175143 atatttctacaatcatttttaaacaacttttggaacaa 11175180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 19631430 - 19631389
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  19631430 ttgtcaaaaaattgttacaaaatagttgtacaaatatcattt 19631389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 19828331 - 19828290
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcattt 365  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  19828331 ttgtcaaaaaattgttacaaaatagttgtacaaatatcattt 19828290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 23345016 - 23345061
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||||    
T  23345016 ttgtcaaaaagttgttataaaatgaatgtacaaatatcatttctct 23345061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 375
Target Start/End: Complemental strand, 24766178 - 24766145
Alignment:
Q  342 aaaagggttgtacaaatatcatttctcttgtttt 375  Q
    |||| |||||||||||||||||||||||||||||    
T  24766178 aaaatggttgtacaaatatcatttctcttgtttt 24766145  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 3299138 - 3299178
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||| |||||| ||||||||||||||||||||||||    
T  3299138 aaaagttgtcataaaatggttgtacaaatatcatttctctt 3299178  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 5031961 - 5031921
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  5031961 aaaagttgttacaaaatggttgtacaaatatcatttctctt 5031921  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 6336290 - 6336250
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  6336290 aaaagttgttagaaaatggttgtacaaatatcatttctctt 6336250  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 26273328 - 26273276
Alignment:
Q  214 aacaacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    ||||||||||||||||||| |||| |  ||| |||| ||||||||||||||||    
T  26273328 aacaacttttgggacaaccatattgtgttctcttcttattggtcaaaaacaat 26273276  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 32688571 - 32688615
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||    
T  32688571 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctc 32688615  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 36587495 - 36587539
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||||| | |||| |||||| |||||||||||||||    
T  36587495 ttgtcaaaaaattgtcaaaaaatggttgttcaaatatcatttctc 36587539  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 199310 - 199264
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  199310 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 199264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 10762 - 10807
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||    
T  10762 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctct 10807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 155950 - 155906
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||    
T  155950 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 155906  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 21655 - 21698
Alignment:
Q  327 tcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||    
T  21655 tcaaaaaattgtaataaaatggttgtaaaaatatcatttctctt 21698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 4359 - 4305
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctcttgttttatg 378  Q
    |||||||||| || | |||||| |||||||||||||||||||||||  |||||||    
T  4359 ttgtcaaaaagttatcataaaatggttgtacaaatatcatttctctaattttatg 4305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 9875 - 9920
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||||||||||||| | |||| | |||||||||||||||||||||    
T  9875 ttgtcaaaaaattgtgaaaaaatgattgtacaaatatcatttctct 9920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 9497 - 9451
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||| ||||||| |||||  ||||||||||||||||||||||||    
T  9497 ttgtcaacaaattgtcataaagtggttgtacaaatatcatttctctt 9451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 27090 - 27136
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||| |||||||  ||| ||||||||||||||||||||||||    
T  27090 ttgtcaaaagattgttaagaaatggttgtacaaatatcatttctctt 27136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 278467 - 278513
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||||||||||| | || |||||||||||||| |||||||||    
T  278467 ttgtcaaaaaattgttacagaatggttgtacaaatataatttctctt 278513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 14572 - 14613
Alignment:
Q  329 aaaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    |||||||||| |||||| || |||||||||||||||||||||    
T  14572 aaaaaattgtaataaaatggctgtacaaatatcatttctctt 14613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 17480 - 17435
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctct 369  Q
    ||||| ||||||||| | |||| |||||||||||||||||||||||    
T  17480 ttgtctaaaaattgtgacaaaatggttgtacaaatatcatttctct 17435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 88959 - 88910
Alignment:
Q  217 aacttttgggacaaccttattattatcttttctcattggtcaaaaacaat 266  Q
    |||||| | |||||||||||| || |||||||| ||||||||||||||||    
T  88959 aactttagtgacaaccttatttttttcttttcttattggtcaaaaacaat 88910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 6592 - 6540
Alignment:
Q  184 agagtaataatatttgtacaatcatttttaaacaacttttgggacaaccttat 236  Q
    |||| ||| ||||||| |||||||||||| ||||||||||| |||||| ||||    
T  6592 agagaaatgatatttgaacaatcattttttaacaacttttgtgacaactttat 6540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 16431 - 16387
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||    
T  16431 ttgtcaaaaaattataataaagtggttgtacaaatatcatttctc 16387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 17019 - 16975
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||||    
T  17019 ttgtcaaaaagttgtagtaaaatggttgtacaaatatcatttctc 16975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 25741 - 25701
Alignment:
Q  330 aaaaattgttataaaagggttgtacaaatatcatttctctt 370  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  25741 aaaaattgtcataaagtggttgtacaaatatcatttctctt 25701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 72196 - 72240
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||    
T  72196 ttgtctaaaagttgttacaaaatggttgtacaaatatcatttctc 72240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 6471 - 6427
Alignment:
Q  324 ttgtcaaaaaattgttataaaagggttgtacaaatatcatttctc 368  Q
    |||||||||| |||| |||||| || |||||||||||||||||||    
T  6471 ttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 6427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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