View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3506_high_1 (Length: 1056)

Name: NF3506_high_1
Description: NF3506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3506_high_1
NF3506_high_1
[»] chr5 (34 HSPs)
chr5 (284-1045)||(38816178-38816932)
chr5 (474-623)||(38821782-38821928)
chr5 (835-910)||(19820428-19820503)
chr5 (755-884)||(22423764-22423895)
chr5 (843-910)||(22013364-22013431)
chr5 (836-910)||(42469171-42469245)
chr5 (836-885)||(15410483-15410532)
chr5 (836-888)||(6326332-6326384)
chr5 (787-912)||(37328829-37328955)
chr5 (787-871)||(3966492-3966577)
chr5 (837-895)||(15382442-15382500)
chr5 (838-871)||(6035472-6035505)
chr5 (753-802)||(8420075-8420124)
chr5 (835-888)||(21191090-21191143)
chr5 (755-807)||(9929668-9929720)
chr5 (835-871)||(17123037-17123073)
chr5 (844-888)||(21522722-21522766)
chr5 (844-888)||(21533288-21533332)
chr5 (835-871)||(27144452-27144488)
chr5 (835-910)||(6247572-6247647)
chr5 (787-871)||(11685928-11686012)
chr5 (835-878)||(14674251-14674294)
chr5 (835-878)||(19579683-19579726)
chr5 (836-895)||(21137654-21137713)
chr5 (835-878)||(34879332-34879375)
chr5 (836-878)||(5873548-5873590)
chr5 (753-783)||(24906250-24906280)
chr5 (836-866)||(27932229-27932259)
chr5 (835-869)||(28588708-28588742)
chr5 (694-732)||(35665559-35665597)
chr5 (842-888)||(36642803-36642849)
chr5 (835-884)||(19552577-19552626)
chr5 (837-910)||(30135264-30135336)
chr5 (833-862)||(32766975-32767004)
[»] chr3 (27 HSPs)
chr3 (1-230)||(34899746-34899975)
chr3 (835-910)||(8383207-8383282)
chr3 (798-897)||(5441029-5441128)
chr3 (785-874)||(8039818-8039908)
chr3 (836-895)||(24205076-24205135)
chr3 (844-910)||(8842280-8842346)
chr3 (814-879)||(5407261-5407325)
chr3 (835-895)||(28917966-28918026)
chr3 (836-895)||(4991002-4991061)
chr3 (842-901)||(10335327-10335386)
chr3 (787-910)||(25064859-25064981)
chr3 (835-910)||(55401025-55401100)
chr3 (835-909)||(8587055-8587129)
chr3 (836-886)||(9800014-9800064)
chr3 (835-909)||(32429414-32429488)
chr3 (835-887)||(2620087-2620139)
chr3 (835-895)||(15796328-15796388)
chr3 (835-887)||(26492239-26492291)
chr3 (839-878)||(21720746-21720785)
chr3 (753-791)||(4466538-4466576)
chr3 (753-783)||(5440965-5440995)
chr3 (835-885)||(12674535-12674585)
chr3 (753-791)||(13807237-13807275)
chr3 (837-911)||(14223889-14223962)
chr3 (837-878)||(3865592-3865633)
chr3 (837-878)||(12703989-12704030)
chr3 (814-867)||(34307794-34307846)
[»] chr7 (34 HSPs)
chr7 (836-910)||(27944991-27945065)
chr7 (836-910)||(24105629-24105702)
chr7 (785-867)||(29787354-29787435)
chr7 (835-888)||(11722132-11722185)
chr7 (787-897)||(24339605-24339716)
chr7 (804-885)||(19206025-19206107)
chr7 (787-871)||(32308109-32308194)
chr7 (755-865)||(11700798-11700909)
chr7 (835-895)||(1433419-1433479)
chr7 (755-915)||(7328639-7328805)
chr7 (839-910)||(2034392-2034462)
chr7 (835-886)||(2425767-2425818)
chr7 (835-910)||(43027503-43027578)
chr7 (836-895)||(43249958-43250017)
chr7 (835-877)||(8046061-8046103)
chr7 (804-871)||(22484014-22484082)
chr7 (835-877)||(23191879-23191921)
chr7 (835-885)||(26733279-26733329)
chr7 (792-866)||(30731031-30731104)
chr7 (795-868)||(11072290-11072362)
chr7 (837-886)||(49107795-49107844)
chr7 (835-871)||(20549780-20549816)
chr7 (835-874)||(2948669-2948708)
chr7 (787-871)||(6630897-6630982)
chr7 (835-878)||(21828439-21828482)
chr7 (836-867)||(28155563-28155594)
chr7 (835-909)||(598160-598233)
chr7 (836-886)||(5235960-5236010)
chr7 (787-853)||(9933282-9933347)
chr7 (835-877)||(20545270-20545312)
chr7 (837-895)||(26329418-26329476)
chr7 (837-886)||(4017830-4017879)
chr7 (754-783)||(17852091-17852120)
chr7 (838-871)||(25791642-25791675)
[»] chr6 (33 HSPs)
chr6 (787-888)||(10294079-10294181)
chr6 (835-895)||(9027143-9027203)
chr6 (835-910)||(853893-853968)
chr6 (787-895)||(16766662-16766771)
chr6 (835-895)||(5000660-5000720)
chr6 (755-895)||(5732474-5732604)
chr6 (842-910)||(8365560-8365628)
chr6 (836-908)||(12696277-12696348)
chr6 (787-895)||(9107355-9107464)
chr6 (835-886)||(9629357-9629408)
chr6 (835-910)||(30866178-30866253)
chr6 (836-910)||(6389693-6389767)
chr6 (835-885)||(9658854-9658904)
chr6 (835-873)||(19040339-19040377)
chr6 (842-910)||(3398569-3398637)
chr6 (835-895)||(7938081-7938141)
chr6 (836-884)||(13851712-13851760)
chr6 (836-895)||(7977865-7977924)
chr6 (835-878)||(20371144-20371187)
chr6 (792-895)||(34073337-34073441)
chr6 (835-888)||(426548-426601)
chr6 (835-876)||(7265627-7265668)
chr6 (835-887)||(8777007-8777059)
chr6 (835-895)||(34595099-34595159)
chr6 (755-802)||(426478-426525)
chr6 (835-878)||(17841623-17841666)
chr6 (804-887)||(31579229-31579311)
chr6 (836-910)||(25038106-25038180)
chr6 (835-909)||(31959111-31959184)
chr6 (753-783)||(34073276-34073306)
chr6 (755-796)||(2117134-2117175)
chr6 (835-868)||(10842524-10842557)
chr6 (791-885)||(26562664-26562759)
[»] chr8 (19 HSPs)
chr8 (787-888)||(22651948-22652050)
chr8 (787-893)||(29510289-29510396)
chr8 (842-910)||(25192388-25192456)
chr8 (835-901)||(926822-926888)
chr8 (835-888)||(27213519-27213572)
chr8 (842-910)||(126390-126457)
chr8 (835-910)||(13436998-13437073)
chr8 (835-878)||(31109552-31109595)
chr8 (835-897)||(24362236-24362298)
chr8 (835-868)||(39954313-39954346)
chr8 (835-875)||(31236611-31236651)
chr8 (802-878)||(37283812-37283887)
chr8 (835-910)||(4298920-4298994)
chr8 (835-910)||(11944615-11944690)
chr8 (835-897)||(4673459-4673521)
chr8 (835-869)||(27101506-27101540)
chr8 (835-877)||(34897068-34897110)
chr8 (792-910)||(11927076-11927195)
chr8 (835-868)||(13844630-13844663)
[»] chr2 (27 HSPs)
chr2 (799-910)||(21782817-21782927)
chr2 (846-910)||(33519736-33519800)
chr2 (835-910)||(20539708-20539783)
chr2 (804-895)||(4332891-4332981)
chr2 (835-885)||(21616737-21616787)
chr2 (837-910)||(19536434-19536507)
chr2 (838-911)||(23717976-23718048)
chr2 (838-911)||(24105648-24105720)
chr2 (804-862)||(1327976-1328033)
chr2 (787-885)||(36409614-36409711)
chr2 (810-895)||(18276486-18276570)
chr2 (844-909)||(21624217-21624282)
chr2 (755-868)||(19573970-19574078)
chr2 (787-860)||(44860320-44860394)
chr2 (785-873)||(18420417-18420506)
chr2 (755-802)||(19536361-19536408)
chr2 (835-870)||(37411278-37411313)
chr2 (837-911)||(14996260-14996333)
chr2 (756-802)||(18255945-18255991)
chr2 (836-911)||(21374734-21374810)
chr2 (805-895)||(28412315-28412404)
chr2 (835-893)||(31018557-31018615)
chr2 (756-802)||(34691770-34691816)
chr2 (756-802)||(34714182-34714228)
chr2 (790-911)||(2331743-2331863)
chr2 (836-897)||(4142875-4142936)
chr2 (836-877)||(21091706-21091747)
[»] scaffold0306 (1 HSPs)
scaffold0306 (835-911)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (755-910)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (835-911)||(21902-21978)
[»] chr1 (32 HSPs)
chr1 (835-887)||(6427323-6427375)
chr1 (835-895)||(40917716-40917776)
chr1 (835-894)||(398799-398858)
chr1 (835-887)||(2896155-2896207)
chr1 (756-902)||(10572535-10572690)
chr1 (836-911)||(5376535-5376609)
chr1 (835-910)||(5927374-5927449)
chr1 (755-808)||(48547938-48547991)
chr1 (835-879)||(12443494-12443538)
chr1 (835-871)||(17831565-17831601)
chr1 (835-871)||(36878450-36878486)
chr1 (796-888)||(1486703-1486796)
chr1 (795-895)||(38503285-38503386)
chr1 (842-897)||(48040503-48040558)
chr1 (810-888)||(1262856-1262933)
chr1 (835-885)||(9709795-9709845)
chr1 (835-885)||(34298411-34298461)
chr1 (836-910)||(39130802-39130876)
chr1 (835-871)||(19562655-19562691)
chr1 (836-871)||(609493-609528)
chr1 (835-878)||(6415035-6415078)
chr1 (835-910)||(31014993-31015068)
chr1 (835-878)||(46348417-46348460)
chr1 (836-887)||(48450622-48450673)
chr1 (837-871)||(3490426-3490460)
chr1 (835-869)||(10475011-10475045)
chr1 (835-901)||(15641064-15641130)
chr1 (833-871)||(40285686-40285724)
chr1 (835-888)||(20157384-20157437)
chr1 (835-868)||(21530681-21530714)
chr1 (787-865)||(25361881-25361960)
chr1 (836-865)||(41877505-41877534)
[»] scaffold0168 (3 HSPs)
scaffold0168 (755-901)||(21002-21149)
scaffold0168 (755-816)||(21217-21278)
scaffold0168 (755-816)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (835-895)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (836-895)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (787-895)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (836-877)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (785-870)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (835-907)||(178853-178925)
scaffold0018 (836-877)||(192284-192325)
[»] chr4 (15 HSPs)
chr4 (835-895)||(23293020-23293080)
chr4 (836-871)||(35723420-35723455)
chr4 (837-871)||(17345451-17345485)
chr4 (836-893)||(847918-847975)
chr4 (835-888)||(36635296-36635349)
chr4 (836-895)||(24343472-24343531)
chr4 (787-893)||(30982863-30982967)
chr4 (836-878)||(7012048-7012090)
chr4 (835-916)||(7670625-7670709)
chr4 (835-885)||(20521883-20521933)
chr4 (837-895)||(20633450-20633508)
chr4 (755-878)||(30298928-30299048)
chr4 (755-878)||(30327796-30327916)
chr4 (835-869)||(40613441-40613475)
chr4 (837-906)||(28084475-28084544)
[»] scaffold0652 (1 HSPs)
scaffold0652 (835-895)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (834-910)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (836-895)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (835-878)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (835-868)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (798-880)||(28830-28913)


Alignment Details
Target: chr5 (Bit Score: 716; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 716; E-Value: 0
Query Start/End: Original strand, 284 - 1045
Target Start/End: Original strand, 38816178 - 38816932
Alignment:
Q  284 tcagtgaaagaaaatgcaagaaaaggtatattgtatcctttgaacctcaatttctcacctacccaaagaaacctcatacaactatatacccttctctaac 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816178 tcagtgaaagaaaatgcaagaaaaggtatattgtatcctttgaacctcaatttctcacctacccaaagaaacctcatacaactatatacccttctctaac 38816277  T
Q  384 agacaaagtcagtttaatttacataaggccgtgatgtataccaactgtaaccacaaaaagtagccaactgcaaaatctagacaaaatgtaaaaccctaag 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816278 agacaaagtcagtttaatttacataaggccgtgatgtataccaactgtaaccacaaaaagtagccaactgcaaaatctagacaaaatgtaaaaccctaag 38816377  T
Q  484 aacaaggtttaattaaacctaaacaacagcataccatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttc 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816378 aacaaggtttaattaaacctaaacaacagcataccatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttc 38816477  T
Q  584 cacagcaagatcactcaaatcttcacctgaacacacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgaga 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816478 cacagcaagatcactcaaatcttcacctgaacacacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgaga 38816577  T
Q  684 cttcatattaaaggtgtgtccagtgtccaacagatgtcagtctccaacactatcacgattcacgaatataactatgaagcacggacactcctcgaattag 783  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38816578 cttcatattaaaggtgtgtgcagtgtccaacagatgtcagtctccaacactatcacgattcacgaatataactatgaatcacggacactcctcgaattag 38816677  T
Q  784 ccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtg 883  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  38816678 ccatgtccgacaccgacaccacaccgacacataattatactgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg----- 38816772  T
Q  884 tccggagtccgtattcgtgcttcatagtatatggttaccgttcaattattctattttctcaaattattgcttcaattcaagcaatgatacaaacaatata 983  Q
      ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38816773 --cggagtccgtattagtgcttcatagtatatggttaccgttcaattattctattttctcaaattattgcttcaattcaaacaatgatacaaacaatata 38816870  T
Q  984 ccatattacattaattgaattgtaaaacccaactatttttaacctgcagcgactctctgttg 1045  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816871 ccatattacattaattgaattgtaaaacccaactatttttaacctgcagcgactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 38821782 - 38821928
Alignment:
Q  474 aaaccctaagaacaaggtttaattaaacctaaacaacagcataccatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaa 573  Q
    |||||||||||||||| |||||  ||| ||||||| ||   ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |    
T  38821782 aaaccctaagaacaagatttaagcaaatctaaacatca---taccatttgtccctttctcacccacccaagccttcctccttcttctttagatgggcaca 38821878  T
Q  574 ttgaatgttccacagcaagatcactcaaatcttcacctgaacacacaaca 623  Q
      ||||  |||||||||||||| |||||||||||||||| ||||||||||    
T  38821879 ccgaatagtccacagcaagatcgctcaaatcttcacctggacacacaaca 38821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 755 - 884
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 851  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  852 agcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 843 - 910
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  843 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 836 - 910
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 885
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 836 - 888
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 787 - 912
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  885 ccggagtccgtattcgtgcttcatagta 912  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 787 - 871
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 837 - 895
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 838 - 871
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  838 tttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 753 - 802
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  753 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 802  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 835 - 888
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 755 - 807
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 807  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 871
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 844 - 888
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  844 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 844 - 888
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  844 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 871
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 871
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 895
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Complemental strand, 34879375 - 34879332
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  34879375 gattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 836 - 878
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 753 - 783
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  753 aactatgaagcacggacactcctcgaattag 783  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 836 - 866
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtg 866  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 869
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtca 869  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 732
Target Start/End: Original strand, 35665559 - 35665597
Alignment:
Q  694 aaggtgtgtccagtgtccaacagatgtcagtctccaaca 732  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  35665559 aaggtgtgtccagtgtccaacacatgtcagtttccaaca 35665597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 842 - 888
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 835 - 884
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 910
Target Start/End: Complemental strand, 30135336 - 30135264
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||| ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 833 - 862
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  833 gcgattttctcaaattattagcggtgtcgg 862  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 230; Significance: 1e-126; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34899975 - 34899746
Alignment:
Q  1 atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaacacatctctctttagttcttctctcgctatttgatgtcaacaaaagctaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899975 atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaacacatctctctttagttcttctctcgctatttgatgtcaacaaaagctaa 34899876  T
Q  101 attgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttccttccattctcaccaaacatgaaaggtatgtatcttccaactacaaaatttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899875 attgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttccttccattctcaccaaacatgaaaggtatgtatcttccaactacaaaatttt 34899776  T
Q  201 atgtgaatttgtgcagatgatatcactgac 230  Q
    ||||||||||||||||||||||||||||||    
T  34899775 atgtgaatttgtgcagatgatatcactgac 34899746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 798 - 897
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  798 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 896  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 785 - 874
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  785 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatc 874  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 836 - 895
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 844 - 910
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  844 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 814 - 879
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  814 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 879  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 836 - 895
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 842 - 901
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 901  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 787 - 910
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  887 ggagtccgtattcgtgcttcatag 910  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 835 - 910
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 909
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 909  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 836 - 886
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 909
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 909  Q
    |||||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 887
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 895
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 887
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 839 - 878
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  839 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 753 - 791
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  753 aactatgaagcacggacactcctcgaattagccatgtcc 791  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 753 - 783
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  753 aactatgaagcacggacactcctcgaattag 783  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 885
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 753 - 791
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  753 aactatgaagcacggacactcctcgaattagccatgtcc 791  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 837 - 911
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    |||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 878
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||| ||||||||||||| |||||||||||||||| ||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 878
Target Start/End: Complemental strand, 12704030 - 12703989
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  12704030 ttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 814 - 867
Target Start/End: Original strand, 34307794 - 34307846
Alignment:
Q  814 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 867  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 5e-22; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 836 - 910
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 836 - 910
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 785 - 867
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  785 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 867  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 835 - 888
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 787 - 897
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  885 ccggagtccgtat 897  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 804 - 885
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  804 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 787 - 871
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 755 - 865
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 852  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  853 gcggtgtcggcgt 865  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 755 - 915
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 847  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  848 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 915  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 839 - 910
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  839 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 835 - 886
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 836 - 895
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 877
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 804 - 871
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  804 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 877
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 885
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 792 - 866
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  792 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtg 866  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 795 - 868
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  795 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 868  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 837 - 886
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 871
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 874
Target Start/End: Complemental strand, 2948708 - 2948669
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatc 874  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 871
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 867
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgt 867  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 909
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 909  Q
    |||||||| ||||||||||||||||||  |||||||| |||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 836 - 886
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    ||||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 787 - 853
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 853  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 877
Target Start/End: Original strand, 20545270 - 20545312
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  20545270 gattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 837 - 895
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 886
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    |||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 754 - 783
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  754 actatgaagcacggacactcctcgaattag 783  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 838 - 871
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  838 tttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 7e-21; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  885 ccgg 888  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 787 - 895
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  885 ccggagtccgt 895  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 835 - 895
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 755 - 895
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 854  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  855 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 842 - 910
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 836 - 908
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 908  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 787 - 895
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  885 ccggagtccgt 895  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 886
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 886  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 836 - 910
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 835 - 885
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 835 - 873
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtat 873  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 842 - 910
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 836 - 884
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 836 - 895
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 835 - 878
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 792 - 895
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  792 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 889  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  890 gtccgt 895  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 835 - 888
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 835 - 876
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccg 876  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 887
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 755 - 802
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 802  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 804 - 887
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  804 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||| ||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 836 - 910
Target Start/End: Original strand, 25038106 - 25038180
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038106 attttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 909
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 909  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 753 - 783
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  753 aactatgaagcacggacactcctcgaattag 783  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 755 - 796
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacac 796  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 835 - 868
Target Start/End: Complemental strand, 10842557 - 10842524
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtc 868  Q
    |||||| |||||||||||||||||||||||||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 791 - 885
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  791 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| || | ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 787 - 888
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  885 ccgg 888  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 787 - 893
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  885 ccggagtcc 893  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 842 - 910
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 835 - 901
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 901  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 835 - 888
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 842 - 910
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 835 - 878
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 897
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 897  Q
    |||| ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 835 - 868
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtc 868  Q
    ||||||||||||||||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 875
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatcc 875  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 802 - 878
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  802 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 4298920 - 4298994
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298920 gattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Complemental strand, 11944690 - 11944615
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944690 gattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 897
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 897  Q
    |||||| ||||||||||| | |||||||||||||||| || ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 869
Target Start/End: Complemental strand, 27101540 - 27101506
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtca 869  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 877
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 792 - 910
Target Start/End: Original strand, 11927076 - 11927195
Alignment:
Q  792 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 889  Q
    |||||| |||| |||||||||||||  |||| | |||| ||| | |||||| ||||||||||| | |||||||||| | || ||||||| |||||  ||     
T  11927076 gacaccaacacgacaccgacacatataattacactgaattat-gtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggt 11927174  T
Q  890 gtccgtattcgtgcttcatag 910  Q
    ||||||||  |||||||||||    
T  11927175 gtccgtatctgtgcttcatag 11927195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 835 - 868
Target Start/End: Original strand, 13844630 - 13844663
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtc 868  Q
    |||||||||||||||||||| |||||||||||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 7e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 799 - 910
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  799 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 898  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  899 cgtgcttcatag 910  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 846 - 910
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  846 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 804 - 895
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  804 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 835 - 885
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 837 - 910
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 838 - 911
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  838 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 838 - 911
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  838 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 804 - 862
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  804 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 862  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 787 - 885
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 810 - 895
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  810 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 844 - 909
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  844 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 909  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 755 - 868
Target Start/End: Complemental strand, 19574078 - 19573970
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 854  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  855 ggtgtcggcgtgtc 868  Q
    ||||||||||||||    
T  19573983 ggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 787 - 860
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 860  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 785 - 873
Target Start/End: Original strand, 18420417 - 18420506
Alignment:
Q  785 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtat 873  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 755 - 802
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 802  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 870
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcag 870  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 837 - 911
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    |||| ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 756 - 802
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  756 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 802  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 836 - 911
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 805 - 895
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  805 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| ||| |||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 893
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 893  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 756 - 802
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  756 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 802  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 756 - 802
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  756 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 802  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 790 - 911
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  790 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 889  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| | |||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  890 gtccgtattcgtgcttcatagt 911  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 836 - 897
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 897  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 836 - 877
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 835 - 911
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 755 - 910
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  755 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 849  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  850 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 835 - 911
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 4e-16; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 835 - 887
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 835 - 894
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 894  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 835 - 887
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 902
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  756 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 845  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  846 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 902  Q
    |||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 836 - 911
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 911  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 910
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||| ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 808  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 879
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 879  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 871
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 871
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 796 - 888
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  796 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 795 - 895
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  795 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 892  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  893 cgt 895  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 842 - 897
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  842 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 897  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 810 - 888
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  810 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 885
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 885
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 836 - 910
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    ||||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 871
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 871
Target Start/End: Original strand, 609493 - 609528
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||| |||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 910
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 887
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 887  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 837 - 871
Target Start/End: Original strand, 3490426 - 3490460
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||| ||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 869
Target Start/End: Original strand, 10475011 - 10475045
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtca 869  Q
    ||||||||||| |||||||||||||||||||||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 901
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 901  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 833 - 871
Target Start/End: Original strand, 40285686 - 40285724
Alignment:
Q  833 gcgattttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 835 - 888
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    |||||||||| ||||||||||||||||  ||||||||  ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 835 - 868
Target Start/End: Complemental strand, 21530714 - 21530681
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtc 868  Q
    |||||||||||||||||| |||||||||||||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 787 - 865
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  787 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 865  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 836 - 865
Target Start/End: Original strand, 41877505 - 41877534
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgt 865  Q
    ||||||||||||||||||||||||||||||    
T  41877505 attttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 755 - 901
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 852  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  853 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 901  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 755 - 816
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 816  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 755 - 816
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 816  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 835 - 895
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 836 - 895
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 787 - 895
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  787 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  885 ccggagtccgt 895  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 877
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 785 - 870
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  785 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 870  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 907
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 907  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 836 - 877
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 877  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000003; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 835 - 895
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 836 - 871
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 837 - 871
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagt 871  Q
    |||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 836 - 893
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 893  Q
    |||||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 835 - 888
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 888  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 895
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 893
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  787 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 884  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| || |||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  885 ccggagtcc 893  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 836 - 878
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 916  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 885
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 885  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 837 - 895
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||| |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 878
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 852  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  853 gcggtgtcggcgtgtcagtatccgtg 878  Q
    || |||||||||||||||| ||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 878
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  755 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 852  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  853 gcggtgtcggcgtgtcagtatccgtg 878  Q
    || |||||||||||||||| ||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 835 - 869
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtca 869  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  837 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 906  Q
    |||| ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 895
Target Start/End: Original strand, 496 - 556
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    |||||| ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 834 - 910
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  834 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 910  Q
    |||||||||||||||||||||||||| |||||||  || |  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 895
Target Start/End: Complemental strand, 3340 - 3281
Alignment:
Q  836 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 895  Q
    ||||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 878
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 878  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 835 - 868
Target Start/End: Complemental strand, 1669 - 1636
Alignment:
Q  835 gattttctcaaattattagcggtgtcggcgtgtc 868  Q
    |||||||||||||||||| |||||||||||||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 798 - 880
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  798 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgcc 880  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||| | ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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