View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3508_high_16 (Length: 251)
Name: NF3508_high_16
Description: NF3508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3508_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 907355 - 907584
Alignment:
| Q |
10 |
gcacagatacccagactacacccaaaagcatcgaaacaaattcaaatcttccaacactcataaattattactagcttagactgttgggttcatcaaaatt |
109 |
Q |
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| T |
907355 |
gcacaaatacccagactacacccaaaagcatcgaaacaaattcaaatcttccaacactcataaattattactagcttagactgttgggttcatcaaaatt |
907454 |
T |
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| Q |
110 |
ccaagtatttctcttgttgaacatcttttgcccttattcgaactaccattcgtggaagaacattaggttgatctttatcacctttggttagaatttctcc |
209 |
Q |
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| T |
907455 |
ccaagtatttctcttgttgaacatcttttgcccttattcgaactaccattcgtggaagaacattaggttgatctttatcacctttggttagaatttctcc |
907554 |
T |
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| Q |
210 |
ccttttgaattccactctttccatttgtac |
239 |
Q |
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| T |
907555 |
ccctttgaattccactctttccatttgtac |
907584 |
T |
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