View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3508_high_8 (Length: 363)
Name: NF3508_high_8
Description: NF3508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3508_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 43016015 - 43016318
Alignment:
| Q |
1 |
tgtagatcgagtgttgacatgattaataaacattgcttgcatacaccgaaaaattaaatttgtatggacctgaccggatgataaatcagtgtcagtagct |
100 |
Q |
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| T |
43016015 |
tgtatatcgagtgttgacatgattaataaacattgcttgcatacaccgcaaaattaaatttgtatggacctgaccggatgataaatcagtgtcagtagct |
43016114 |
T |
|
| Q |
101 |
agctaaccaacgttggtctacccacctagctaagaaaagaaaatgtaacattataaatagataaatatagttttgatgatgattgatacaaccattatat |
200 |
Q |
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| T |
43016115 |
agctaaccaacgttggtttacccacctagctaagaaaagaaaatgtaacattataaataaataaatatagttttgatgatgattgatacaaccattatat |
43016214 |
T |
|
| Q |
201 |
atattgtaggttggaataggagaaggttctacaacaagagaaatgcaagcatcaggaggctcatgtgatcaggaagtgcatgaaagacagcatcatgtat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43016215 |
atattgtaggttggaataggagaaggttctacaacaagagaaatgcaagcatcaggaggctcatgtgatcaggaagtgcatgaaagacagcatcatgtat |
43016314 |
T |
|
| Q |
301 |
tagc |
304 |
Q |
| |
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|||| |
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| T |
43016315 |
tagc |
43016318 |
T |
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