View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3512_high_14 (Length: 390)
Name: NF3512_high_14
Description: NF3512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3512_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 41 - 367
Target Start/End: Original strand, 6839352 - 6839680
Alignment:
| Q |
41 |
gatgtaatgaatactgaacacttggcgtggacggtgtggatgtttggattattcggatgtggatggataggattatcaaattccaataatagaataagaa |
140 |
Q |
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| T |
6839352 |
gatgtaatgaatactgaacacttggcttggacggtgtggatgtttggattattcggatgtggatggataggattatcaaattccaataatagaataagaa |
6839451 |
T |
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| Q |
141 |
gaaataaacaattaacatgtcatttttcaggtcaaaaaagaacatgttaatttttctttgaaaaataaattatatgtcatcctcgtaactgtcctaatga |
240 |
Q |
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| T |
6839452 |
gaaataaacaattaacatgtcatttttcaggtcaaaaaagaacatgttattttttctatgaaaaataaattatatgtcatcctcgtaacagtcctaatga |
6839551 |
T |
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| Q |
241 |
ttgttaccaaatgcaagcaaagtccgagttttgggtacgtttgtctaatttggtcaatatacggttttaattgctagatcactcatag--aaaataaaat |
338 |
Q |
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| T |
6839552 |
ttgttaccaaatgcaagcaaagtccgagttttgggtacgtttgtctaatttggtcaataaacggttttaattgctagatcaatcatagaaaaaaaaaaat |
6839651 |
T |
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| Q |
339 |
acttggtggacaacctctaatgggtatat |
367 |
Q |
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| T |
6839652 |
acttggtggacaacctctaatggctatat |
6839680 |
T |
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