View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3512_high_20 (Length: 226)
Name: NF3512_high_20
Description: NF3512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3512_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 36700725 - 36700889
Alignment:
| Q |
6 |
acaacaacgagtcttcattatcacaaagacacatgaattctcagcagggttatataatggatcaacacaaaggtttttataccaatcttttaaggcaaag |
105 |
Q |
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| T |
36700725 |
acaacaacgagtcttcattatcacaaagacacatgaattctcagcagggttatagaatggatcaacacaaaggtttttataccaatcttttaagacaaag |
36700824 |
T |
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| Q |
106 |
taattctcatgctggtcatttctccaacaataacatcatctcctttggaaatggtattgtagtac |
170 |
Q |
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|| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
36700825 |
tagttctcatgatggtcatttctccaacaacaacatcatctcctttggaaatggtattgtagtac |
36700889 |
T |
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