View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3513_low_2 (Length: 814)

Name: NF3513_low_2
Description: NF3513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3513_low_2
NF3513_low_2
[»] chr8 (39 HSPs)
chr8 (318-781)||(3777032-3777498)
chr8 (6-200)||(3776741-3776935)
chr8 (414-621)||(43323791-43323998)
chr8 (477-618)||(38983131-38983271)
chr8 (477-618)||(39014228-39014368)
chr8 (414-618)||(26170245-26170451)
chr8 (414-618)||(20165713-20165918)
chr8 (479-610)||(33284444-33284575)
chr8 (414-581)||(44057142-44057311)
chr8 (414-564)||(9555845-9555995)
chr8 (477-577)||(37483277-37483376)
chr8 (477-557)||(43827170-43827250)
chr8 (636-719)||(37483360-37483446)
chr8 (636-713)||(9555847-9555924)
chr8 (636-713)||(43323793-43323871)
chr8 (636-728)||(3777114-3777208)
chr8 (636-713)||(43325030-43325109)
chr8 (636-719)||(44058221-44058306)
chr8 (636-713)||(4081845-4081926)
chr8 (636-713)||(4085994-4086075)
chr8 (637-713)||(20165838-20165916)
chr8 (636-719)||(26170369-26170455)
chr8 (546-620)||(4080805-4080878)
chr8 (546-620)||(4084954-4085027)
chr8 (636-718)||(38983255-38983340)
chr8 (636-718)||(39014352-39014437)
chr8 (717-766)||(3769690-3769739)
chr8 (414-463)||(13163242-13163291)
chr8 (636-718)||(43827102-43827186)
chr8 (636-713)||(14529633-14529708)
chr8 (636-718)||(20164622-20164706)
chr8 (636-718)||(38982108-38982193)
chr8 (636-718)||(39013205-39013290)
chr8 (636-718)||(44057139-44057224)
chr8 (636-713)||(26169201-26169281)
chr8 (414-458)||(33284378-33284422)
chr8 (653-713)||(33284380-33284440)
chr8 (414-461)||(37124200-37124247)
chr8 (412-462)||(37482268-37482319)
[»] chr1 (56 HSPs)
chr1 (6-200)||(42434887-42435081)
chr1 (414-621)||(27904125-27904334)
chr1 (414-621)||(48643186-48643395)
chr1 (414-604)||(50961357-50961548)
chr1 (477-618)||(16830904-16831044)
chr1 (478-621)||(10375310-10375453)
chr1 (477-618)||(27361451-27361590)
chr1 (477-618)||(46624671-46624811)
chr1 (477-618)||(49763552-49763692)
chr1 (478-618)||(22058766-22058904)
chr1 (477-581)||(20160307-20160410)
chr1 (477-617)||(36631034-36631161)
chr1 (477-603)||(7377421-7377546)
chr1 (26-101)||(5830383-5830458)
chr1 (636-713)||(22059767-22059844)
chr1 (636-718)||(27902951-27903036)
chr1 (404-598)||(38174056-38174248)
chr1 (636-718)||(49762583-49762667)
chr1 (638-713)||(45459689-45459764)
chr1 (636-713)||(48642064-48642141)
chr1 (636-720)||(16831028-16831115)
chr1 (636-710)||(50962650-50962726)
chr1 (636-732)||(20159206-20159303)
chr1 (478-557)||(21813747-21813826)
chr1 (636-725)||(38174056-38174144)
chr1 (636-713)||(50961359-50961437)
chr1 (636-713)||(46625766-46625846)
chr1 (636-713)||(27361387-27361467)
chr1 (415-466)||(9775855-9775906)
chr1 (477-564)||(32976747-32976834)
chr1 (638-713)||(36632236-36632310)
chr1 (636-713)||(48643314-48643393)
chr1 (638-719)||(20160396-20160480)
chr1 (636-713)||(27362124-27362204)
chr1 (636-713)||(49763676-49763756)
chr1 (636-713)||(7378414-7378492)
chr1 (636-713)||(16829857-16829937)
chr1 (636-713)||(27904253-27904332)
chr1 (636-711)||(49664354-49664430)
chr1 (636-716)||(9774964-9775043)
chr1 (410-464)||(45459716-45459770)
chr1 (414-464)||(17865681-17865733)
chr1 (639-719)||(18149883-18149964)
chr1 (638-713)||(45459215-45459292)
chr1 (508-564)||(18149819-18149875)
chr1 (636-722)||(22058691-22058781)
chr1 (671-722)||(38132676-38132728)
chr1 (414-458)||(39910649-39910693)
chr1 (409-459)||(38132675-38132726)
chr1 (636-719)||(46624601-46624687)
chr1 (638-684)||(6667360-6667406)
chr1 (644-722)||(10374128-10374209)
chr1 (564-618)||(44913568-44913622)
chr1 (638-684)||(49663466-49663512)
chr1 (413-450)||(45151353-45151390)
chr1 (413-466)||(48642061-48642114)
[»] chr7 (53 HSPs)
chr7 (414-621)||(15993618-15993826)
chr7 (416-614)||(35359143-35359345)
chr7 (477-621)||(11846947-11847091)
chr7 (477-618)||(7469095-7469235)
chr7 (477-618)||(28241668-28241808)
chr7 (414-618)||(39050492-39050697)
chr7 (414-618)||(32040954-32041158)
chr7 (477-618)||(27250970-27251110)
chr7 (414-618)||(44378553-44378758)
chr7 (414-618)||(44387420-44387625)
chr7 (495-618)||(29675506-29675628)
chr7 (414-614)||(37747291-37747479)
chr7 (479-621)||(11652327-11652468)
chr7 (477-613)||(36710298-36710434)
chr7 (477-603)||(21521389-21521514)
chr7 (477-618)||(30467396-30467536)
chr7 (477-613)||(48989343-48989478)
chr7 (636-713)||(35357456-35357534)
chr7 (477-565)||(44523429-44523517)
chr7 (477-556)||(23152028-23152107)
chr7 (636-713)||(32042945-32043022)
chr7 (636-713)||(37746061-37746139)
chr7 (478-555)||(6907174-6907251)
chr7 (636-713)||(15992332-15992411)
chr7 (638-713)||(11651343-11651419)
chr7 (636-713)||(7468067-7468146)
chr7 (636-713)||(28240670-28240749)
chr7 (636-713)||(15993746-15993824)
chr7 (640-713)||(39174267-39174340)
chr7 (636-713)||(48989282-48989359)
chr7 (640-713)||(39050620-39050695)
chr7 (636-713)||(7469219-7469298)
chr7 (636-715)||(11652454-11652533)
chr7 (643-713)||(32040956-32041027)
chr7 (637-713)||(44378678-44378756)
chr7 (637-713)||(44387545-44387623)
chr7 (636-718)||(27251094-27251179)
chr7 (636-718)||(44377460-44377545)
chr7 (636-718)||(44386327-44386412)
chr7 (636-712)||(27249972-27250051)
chr7 (636-718)||(11845716-11845797)
chr7 (643-718)||(26906460-26906538)
chr7 (636-713)||(30917392-30917469)
chr7 (414-464)||(11651341-11651392)
chr7 (636-713)||(37747399-37747477)
chr7 (414-464)||(3628854-3628903)
chr7 (414-463)||(7468065-7468115)
chr7 (636-713)||(35359264-35359345)
chr7 (565-618)||(813495-813548)
chr7 (420-458)||(11847112-11847152)
chr7 (414-464)||(15992330-15992382)
chr7 (636-693)||(28241792-28241849)
chr7 (638-713)||(30467522-30467596)
[»] chr4 (54 HSPs)
chr4 (414-614)||(21075158-21075359)
chr4 (414-618)||(48181825-48182031)
chr4 (414-617)||(2711976-2712178)
chr4 (477-618)||(30607043-30607183)
chr4 (477-618)||(34423070-34423210)
chr4 (477-618)||(25438976-25439116)
chr4 (477-613)||(23019067-23019202)
chr4 (414-584)||(468216-468388)
chr4 (477-618)||(21020100-21020240)
chr4 (477-620)||(46576931-46577073)
chr4 (477-578)||(40314282-40314382)
chr4 (477-578)||(40324358-40324458)
chr4 (477-581)||(10671391-10671494)
chr4 (477-581)||(10885031-10885134)
chr4 (477-564)||(33268257-33268344)
chr4 (481-618)||(2568971-2569106)
chr4 (477-564)||(21464011-21464097)
chr4 (491-618)||(48508369-48508495)
chr4 (636-719)||(33269490-33269574)
chr4 (636-713)||(46079144-46079222)
chr4 (477-541)||(46080469-46080533)
chr4 (636-722)||(53552269-53552358)
chr4 (636-716)||(46577057-46577137)
chr4 (477-557)||(42251399-42251479)
chr4 (636-713)||(48183159-48183238)
chr4 (638-713)||(1968204-1968279)
chr4 (638-719)||(21075154-21075236)
chr4 (636-718)||(25437928-25438013)
chr4 (636-719)||(34423194-34423280)
chr4 (636-713)||(40314219-40314298)
chr4 (636-713)||(40324295-40324374)
chr4 (653-715)||(2569107-2569169)
chr4 (636-719)||(10670326-10670407)
chr4 (636-719)||(10883965-10884046)
chr4 (636-713)||(21021202-21021282)
chr4 (636-713)||(25439100-25439179)
chr4 (636-713)||(30607167-30607247)
chr4 (636-708)||(10671478-10671549)
chr4 (636-708)||(10885118-10885189)
chr4 (641-713)||(21077104-21077179)
chr4 (636-713)||(23019004-23019083)
chr4 (636-712)||(23020124-23020203)
chr4 (636-727)||(34422041-34422135)
chr4 (636-718)||(30606023-30606108)
chr4 (636-713)||(48181827-48181907)
chr4 (638-713)||(2856342-2856418)
chr4 (414-461)||(42250139-42250187)
chr4 (414-464)||(10670330-10670381)
chr4 (414-464)||(10883969-10884020)
chr4 (414-458)||(21077135-21077181)
chr4 (573-620)||(33268340-33268387)
chr4 (636-713)||(42250141-42250217)
chr4 (414-464)||(46079142-46079193)
chr4 (416-458)||(2569125-2569167)
[»] chr3 (36 HSPs)
chr3 (414-621)||(26167072-26167279)
chr3 (414-621)||(23495590-23495797)
chr3 (477-618)||(24171638-24171778)
chr3 (477-613)||(29860600-29860736)
chr3 (477-564)||(28038850-28038937)
chr3 (636-713)||(38601340-38601419)
chr3 (636-713)||(23494353-23494431)
chr3 (640-713)||(26165880-26165954)
chr3 (477-582)||(38601403-38601507)
chr3 (636-720)||(27988338-27988424)
chr3 (636-713)||(28039956-28040033)
chr3 (636-719)||(26167200-26167283)
chr3 (636-713)||(18320927-18321007)
chr3 (638-721)||(39274586-39274671)
chr3 (638-719)||(5117786-5117868)
chr3 (636-713)||(24170601-24170681)
chr3 (636-718)||(5117362-5117445)
chr3 (414-456)||(7104547-7104589)
chr3 (636-713)||(23495718-23495795)
chr3 (636-713)||(28038789-28038866)
chr3 (639-713)||(49116811-49116888)
chr3 (414-458)||(5117790-5117835)
chr3 (414-518)||(5118752-5118857)
chr3 (636-718)||(5118777-5118860)
chr3 (638-722)||(7104540-7104623)
chr3 (636-713)||(7104640-7104720)
chr3 (414-457)||(28038787-28038830)
chr3 (565-620)||(34520030-34520085)
chr3 (640-706)||(38602574-38602638)
chr3 (414-456)||(50563946-50563989)
chr3 (426-464)||(38602597-38602635)
chr3 (414-460)||(39747180-39747226)
chr3 (636-719)||(46565257-46565337)
chr3 (477-510)||(5117429-5117462)
chr3 (636-713)||(24171762-24171842)
chr3 (644-707)||(49116400-49116465)
[»] scaffold0013 (3 HSPs)
scaffold0013 (414-621)||(99614-99823)
scaffold0013 (636-719)||(100883-100969)
scaffold0013 (414-463)||(100914-100965)
[»] scaffold0087 (2 HSPs)
scaffold0087 (414-621)||(42090-42301)
scaffold0087 (636-713)||(42092-42173)
[»] chr6 (28 HSPs)
chr6 (414-614)||(2403675-2403876)
chr6 (477-614)||(19635708-19635845)
chr6 (477-618)||(28562841-28562981)
chr6 (477-618)||(28188178-28188318)
chr6 (477-618)||(34491221-34491360)
chr6 (479-613)||(3587554-3587687)
chr6 (477-620)||(29056834-29056976)
chr6 (493-598)||(17141068-17141173)
chr6 (416-621)||(17183323-17183515)
chr6 (478-605)||(18867109-18867241)
chr6 (637-718)||(17139765-17139846)
chr6 (478-555)||(28744793-28744869)
chr6 (638-717)||(17183319-17183398)
chr6 (636-713)||(18325544-18325622)
chr6 (638-713)||(2405024-2405101)
chr6 (644-713)||(5756381-5756450)
chr6 (636-719)||(34492391-34492476)
chr6 (636-718)||(28743637-28743719)
chr6 (639-713)||(19634505-19634581)
chr6 (644-719)||(20400138-20400216)
chr6 (414-463)||(2405053-2405103)
chr6 (414-464)||(17139768-17139818)
chr6 (414-458)||(19635867-19635912)
chr6 (636-713)||(28189225-28189305)
chr6 (419-464)||(3587701-3587746)
chr6 (636-693)||(17184539-17184595)
chr6 (414-464)||(19634503-19634555)
chr6 (419-464)||(28743645-28743690)
[»] chr2 (16 HSPs)
chr2 (477-621)||(5203630-5203774)
chr2 (477-618)||(15249391-15249531)
chr2 (477-618)||(43235952-43236092)
chr2 (477-618)||(18748651-18748791)
chr2 (478-595)||(42743982-42744098)
chr2 (477-570)||(18860182-18860275)
chr2 (478-618)||(9891721-9891860)
chr2 (544-621)||(25980841-25980918)
chr2 (636-721)||(5202724-5202811)
chr2 (636-713)||(25979590-25979667)
chr2 (636-713)||(18748775-18748854)
chr2 (636-713)||(15249515-15249594)
chr2 (636-713)||(18695349-18695430)
chr2 (636-713)||(9894519-9894597)
chr2 (636-712)||(15248393-15248472)
chr2 (636-715)||(43235892-43235968)
[»] chr5 (34 HSPs)
chr5 (477-620)||(15839150-15839293)
chr5 (477-618)||(7122358-7122498)
chr5 (477-618)||(21796463-21796603)
chr5 (484-621)||(30668767-30668904)
chr5 (477-618)||(21716727-21716867)
chr5 (477-618)||(31795885-31796025)
chr5 (414-618)||(3370129-3370335)
chr5 (414-618)||(3859760-3859965)
chr5 (477-603)||(42536206-42536331)
chr5 (534-621)||(40722717-40722803)
chr5 (27-101)||(9618414-9618488)
chr5 (636-712)||(40721676-40721752)
chr5 (479-564)||(7006254-7006339)
chr5 (416-540)||(25642657-25642782)
chr5 (636-713)||(3371302-3371381)
chr5 (636-713)||(7121323-7121402)
chr5 (477-538)||(40728203-40728264)
chr5 (636-713)||(3859762-3859841)
chr5 (414-458)||(30668925-30668969)
chr5 (636-713)||(21789552-21789631)
chr5 (636-713)||(40728248-40728328)
chr5 (414-463)||(21789550-21789600)
chr5 (636-713)||(3370131-3370211)
chr5 (636-713)||(7006325-7006401)
chr5 (638-720)||(14212379-14212464)
chr5 (637-714)||(25642705-25642783)
chr5 (417-457)||(40721676-40721716)
chr5 (636-720)||(7122482-7122568)
chr5 (414-458)||(15839314-15839360)
chr5 (636-713)||(15839277-15839358)
chr5 (414-451)||(7006366-7006403)
chr5 (636-693)||(7216592-7216649)
chr5 (636-693)||(21716851-21716907)
chr5 (636-693)||(21796587-21796643)
[»] scaffold0862 (3 HSPs)
scaffold0862 (414-546)||(2072-2205)
scaffold0862 (636-719)||(2125-2209)
scaffold0862 (638-713)||(687-764)
[»] scaffold0012 (3 HSPs)
scaffold0012 (477-564)||(54412-54499)
scaffold0012 (638-713)||(53375-53452)
scaffold0012 (636-713)||(54483-54561)
[»] scaffold0265 (2 HSPs)
scaffold0265 (478-557)||(18983-19062)
scaffold0265 (566-618)||(19058-19110)
[»] scaffold0230 (1 HSPs)
scaffold0230 (636-713)||(18733-18811)
[»] scaffold0606 (1 HSPs)
scaffold0606 (638-713)||(1318-1392)
[»] scaffold0287 (1 HSPs)
scaffold0287 (414-464)||(17182-17231)


Alignment Details
Target: chr8 (Bit Score: 280; Significance: 1e-156; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 318 - 781
Target Start/End: Original strand, 3777032 - 3777498
Alignment:
Q  318 tacatgccacataaggttggtagaaaatatgggaaaaggtgtgtccaccaaacataatccttaaactaatttattgtacaattttataataattatggtt 417  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3777032 tacatgccacataaggt-ggtagaaaatatgggaaaaggtgtgtccaccaaacataatccttaaactaacttattgtacaattttataataattagggtt 3777130  T
Q  418 aatatgtatttacccctgtaatttaggcgagttccggtttatccc--ctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttgattt 515  Q
    |||||||||||||||||||||||||| |||||||||||||| |||  ||||          |||||||||||||||||||||||||| ||||||||||||    
T  3777131 aatatgtatttacccctgtaatttagacgagttccggtttacccctcctataaaaaaaaaagtttagattccaaccctgtaaattaagattctttgattt 3777230  T
Q  516 tagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactg---ta 612  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||    
T  3777231 tagcccctgacctatgtgactgtgcataattgctgacgtgacgagctgatgtggcatgctgactgtgcatatcggattatgtggcgtgatgactgtatta 3777330  T
Q  613 ttattattannnnnnnnnnnnnnagggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatatta 712  Q
    |||||||||              |||||||||||||||||||||||||||  || || |||| ||||| ||||||||||||||| |||||||||||||||    
T  3777331 ttattattatttttattttttttagggttggaatctaaacttttattttttaag-ggataaaccggaattcgtccaaattaaggaggtaaagacatatta 3777429  T
Q  713 atcctaataattataattaaacaaaccaacttcaagtatcattctggtacaacatcaacatgaaggaag 781  Q
    | ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  3777430 accctaataattataataaaacaaaccaacttcaagtatcattgtggtgcaacatcaacattaaggaag 3777498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 3776741 - 3776935
Alignment:
Q  6 gtggaggagagaacacaaaggggggaagagaaccggtggccgtgagatagagagaaagacgtcgataggtggtggatggggtgagagaggcacgaagaca 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  3776741 gtggaggagagaacacgaaggggggaagagaaccggtggccgtgagatagagagaaagacgtcggtaggtggtggatggggtgagagaggcacgaagacg 3776840  T
Q  106 gcaggttgtggccggatgccggcggaggtatggtggagaaagaggagaggaaaagggtgagtggctgggagtgagagtggggttaggttgctgtg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  3776841 gcaggttgtggccgtatgccggcggaggtatggtggagaaagaggagaggaaaagggtgagtggctgggagtcagagtggggttacgttgctgtg 3776935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 414 - 621
Target Start/End: Original strand, 43323791 - 43323998
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |          |||||||||||||||||||||| ||| ||| |||||    
T  43323791 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataagattatttga 43323890  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||||||    
T  43323891 ttttag-ccctgacctatgtgactgtgcagaattgctgacgtggcgagctgatgtggcatgatgactgtgcatagctgattatgtggcgtgatgactgta 43323989  T
Q  613 ttattatta 621  Q
    |||||||||    
T  43323990 ttattatta 43323998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 38983271 - 38983131
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  38983271 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 38983173  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  38983172 actgtgcatatttgattatgtggcgtgctgactgtataatta 38983131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 39014368 - 39014228
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  39014368 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 39014270  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  39014269 actgtgcatatttgattatgtggcgtgctgactgtataatta 39014228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 414 - 618
Target Start/End: Complemental strand, 26170451 - 26170245
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccc--tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattcttt 510  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||  ||||  | |          |||||||||||||||||||||| ||| |||||||    
T  26170451 ggttaatatgtctttaccccctgtaatttaggcgagttccggttttccccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataagattcttt 26170352  T
Q  511 gattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactg 610  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| |||| ||||||    
T  26170351 gatttaagcccctgacccatgtgactgtgcataattgctgacgtggcaagctga-gtggcatgctgactgtgcatatctgattatgtggcgtgctgactg 26170253  T
Q  611 tattatta 618  Q
    ||| ||||    
T  26170252 tataatta 26170245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 414 - 618
Target Start/End: Complemental strand, 20165918 - 20165713
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||  ||||| |          |||||||||||||||| ||||  ||| ||||||||    
T  20165918 ggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccccgtaacataagattctttg 20165819  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| | || |||||||    
T  20165818 attttagcccctgacacatgtgtctgtgcataattgctgacgtggcgagctga-gtggcatgctgactgtgcatatacgattatgtggcatgctgactgt 20165720  T
Q  612 attatta 618  Q
    || ||||    
T  20165719 ataatta 20165713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 479 - 610
Target Start/End: Original strand, 33284444 - 33284575
Alignment:
Q  479 ttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgac 578  Q
    ||||||||||||| ||| || ||| ||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||||| | |||||||    
T  33284444 ttagattccaaccatgtgaaataagattctttgattttagcccctgacctatgcgactgtgcagaactgctgacgtggcgagctgatgtgacttgctgac 33284543  T
Q  579 tgtgcatatcggattatgtgacgtgatgactg 610  Q
    | |||||||| ||||||||| |||||||||||    
T  33284544 tatgcatatctgattatgtggcgtgatgactg 33284575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 414 - 581
Target Start/End: Original strand, 44057142 - 44057311
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccc-tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattcttt 510  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||  |||| | |          |||||||||||||||||||||| ||| |||||||    
T  44057142 ggttaatatgtatttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataagattcttt 44057241  T
Q  511 gattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgt 581  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44057242 gattttagcccctaacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctgactgt 44057311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 414 - 564
Target Start/End: Original strand, 9555845 - 9555995
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||  ||||| |          |||||||||||||||||||||| |||||||||||||    
T  9555845 ggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccctgtaaaaaaaaa-gtttagattccaaccctgtaaaataaaattctttga 9555943  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  9555944 ttttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga 9555995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 37483376 - 37483277
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  37483376 gtttagattccaaccctgtaaaataagattatttgattttagcccctgacccatgtgactgtgcagaattgctgacgtggcgagctga-gtggcatgctg 37483278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 477 - 557
Target Start/End: Original strand, 43827170 - 43827250
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggc 557  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  43827170 gtttagattccaaccctataaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggc 43827250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 37483360 - 37483446
Alignment:
Q  636 agggttggaatctaaacttttattttt--acagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| |||||  |||| ||||||| | |||||||||||||||| |||||||||||||||||||| |||||    
T  37483360 agggttggaatctaaacttttttttttttacagggggtaaaccagaactcgtccaaattacagggggtaaagacatattaaccctaa 37483446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 9555924 - 9555847
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  9555924 agggttggaatctaaactttt-tttttacagggggaaaaccggaactcgcccaaattacagggggtaaagacatattaa 9555847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 43323871 - 43323793
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||||| |||||||||| |||||||||    
T  43323871 agggttggaatctaaacttttttttttacagggggtaaaccggaactcgcctaaattacagggggtaaatacatattaa 43323793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 728
Target Start/End: Complemental strand, 3777208 - 3777114
Alignment:
Q  636 agggttggaatctaaacttttatttttacagc--gggtaaatcggaactcgtccaaattaagggggtaaagacatattaatcctaataattataa 728  Q
    ||||||||||||||||||||| |||||| ||   ||||||| ||||||||||| ||||||  |||||||| ||||||||| |||||| |||||||    
T  3777208 agggttggaatctaaacttttttttttataggaggggtaaaccggaactcgtctaaattacaggggtaaatacatattaaccctaattattataa 3777114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 43325030 - 43325109
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||||||   ||||||| ||||||||||||||||||||    
T  43325030 agggttggaatctaaacttttatttttacaggtgggtaaaccggaactcactcaaattacagggggtaaagacatattaa 43325109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 44058221 - 44058306
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgg-gtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| ||||||||| || | ||| ||||||||| |||||||| ||| |||||||||||||||| |||||    
T  44058221 agggttggaatctaaacttttttttttacaggggaggaaaccggaactcgcccaaattacaggaggtaaagacatattaaccctaa 44058306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 4081845 - 4081926
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta---agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| ||||||||   ||||||||||||||||||||    
T  4081845 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagagggggtaaagacatattaa 4081926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 4085994 - 4086075
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta---agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| ||||||||   ||||||||||||||||||||    
T  4085994 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagagggggtaaagacatattaa 4086075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 637 - 713
Target Start/End: Original strand, 20165838 - 20165916
Alignment:
Q  637 gggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||  | ||||||||| |||||||||    
T  20165838 gggttggaatctaaacttttttttttacagggggaaaaccggaactcgcccaaattagaggggggtaaatacatattaa 20165916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 26170369 - 26170455
Alignment:
Q  636 agggttggaatctaaacttttatttttaca--gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| ||||||||  | ||| ||| ||||||||| | |||||| |||||||||||||||||||| |||||    
T  26170369 agggttggaatctaaacttttttttttacagggggggaaaaccggaactcgcctaaattacagggggtaaagacatattaaccctaa 26170455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 620
Target Start/End: Original strand, 4080805 - 4080878
Alignment:
Q  546 tgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    ||||||| ||||| ||||| ||| ||||||||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  4080805 tgctgacttggcgggctga-gtgacatgctgactgtgcatatctgattatgtggcgtgctgactgtataattatt 4080878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 620
Target Start/End: Original strand, 4084954 - 4085027
Alignment:
Q  546 tgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    ||||||| ||||| ||||| ||| ||||||||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  4084954 tgctgacttggcgggctga-gtgacatgctgactgtgcatatctgattatgtggcgtgctgactgtataattatt 4085027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 718
Target Start/End: Original strand, 38983255 - 38983340
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | ||||||||||||||||||| ||||    
T  38983255 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaacccta 38983340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 718
Target Start/End: Original strand, 39014352 - 39014437
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | ||||||||||||||||||| ||||    
T  39014352 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaacccta 39014437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 717 - 766
Target Start/End: Original strand, 3769690 - 3769739
Alignment:
Q  717 taataattataattaaacaaaccaacttcaagtatcattctggtacaaca 766  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  3769690 taataattataataaaacaaaccaacttgaagtatcattctcgtacaaca 3769739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 13163242 - 13163291
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccc 463  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  13163242 ggttaatatgtctttacccctgtattttaggtgagttccggtttatcccc 13163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 43827186 - 43827102
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatta-aggggg-taaagacatattaatccta 718  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||||| | |||||||| |||||| |||||||||||||| ||||    
T  43827186 agggttggaatctaaactttt-tttttacagggggttaaatcggaacttgcccaaattacagggggataaagacatattaacccta 43827102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 14529708 - 14529633
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||| ||||  |||||| | ||||||||||||||||| |||||||| | ||||||||||||||||||    
T  14529708 agggttggaatctaaattttt--ttttac-gagggtaaatcggaactcgcccaaattacatggggtaaagacatattaa 14529633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 20164706 - 20164622
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaattaa--gggggtaaagacatattaatccta 718  Q
    ||||||| ||||||||||||| ||||||||| ||| |||| ||||||||| ||||||||   ||||||||||||||||||| ||||    
T  20164706 agggttgaaatctaaactttt-tttttacaggggggtaaaccggaactcgcccaaattacaggggggtaaagacatattaacccta 20164622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 38982193 - 38982108
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| || |||||| |||||||  | ||||||||||||||||||| ||||    
T  38982193 agggttggaatctaaacttttttttttacaggggggaaaaccgaaactcgcccaaattacaggggggtaaagacatattaacccta 38982108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 39013290 - 39013205
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| || |||||| |||||||  | ||||||||||||||||||| ||||    
T  39013290 agggttggaatctaaacttttttttttacaggggggaaaaccgaaactcgcccaaattacaggggggtaaagacatattaacccta 39013205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 44057224 - 44057139
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | ||||||||| ||||||||| ||||    
T  44057224 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaatacatattaacccta 44057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 26169281 - 26169201
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaattaaggggg--taaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| ||||||||  ||||  ||||||||||||||    
T  26169281 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggaataaagacatattaa 26169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 33284378 - 33284422
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggttta 458  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||    
T  33284378 ggttaatatgtctttacccctgtaatttgggcgagtttcggttta 33284422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 713
Target Start/End: Complemental strand, 33284440 - 33284380
Alignment:
Q  653 ttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    |||| ||||||||| ||||||| || |||||| ||||||||  ||||||||||||||||||    
T  33284440 ttttttttttacagagggtaaaccgaaactcgcccaaattacaggggtaaagacatattaa 33284380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 37124200 - 37124247
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatcc 461  Q
    ||||||||||| |||||||||||||||| ||||| |||| ||||||||    
T  37124200 ggttaatatgtctttacccctgtaatttgggcgaattccagtttatcc 37124247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 37482268 - 37482319
Alignment:
Q  412 atggttaatatgtatttacccct-gtaatttaggcgagttccggtttatccc 462  Q
    ||||||||||||| |||| |||| ||||||||||||||||| ||||||||||    
T  37482268 atggttaatatgtctttatcccttgtaatttaggcgagttctggtttatccc 37482319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 3e-84; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 42434887 - 42435081
Alignment:
Q  6 gtggaggagagaacacaaaggggggaagagaaccggtggccgtgagatagagagaaagacgtcgataggtggtggatggggtgagagaggcacgaagaca 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  42434887 gtggaggagagaacacgaaggggggaagagaaccggtggccgtgagatagagaaaaagacgtcggtaggtggtggatggggtgagagaggcatgaagaca 42434986  T
Q  106 gcaggttgtggccggatgccggcggaggtatggtggagaaagaggagaggaaaagggtgagtggctgggagtgagagtggggttaggttgctgtg 200  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42434987 gcaggtggtggccggatgccggcagagacatggtggagaaagaggagaggaaaagggtgagtggctgggagtgagagtggggttacgttgctgtg 42435081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 414 - 621
Target Start/End: Complemental strand, 27904334 - 27904125
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||||||||||||  ||||||||||| |||||||| |||| ||||| |          ||||| ||||||||||| |||| ||| ||||||||    
T  27904334 ggttaatatgtatttacccccctgtaatttaggtgagttccgatttaccccctgtaaaaaaaaaagtttaaattccaaccctataaaataagattctttg 27904235  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||    
T  27904234 attttagcccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctggctatgcatatctgattatgtggcgtgatgactgt 27904135  T
Q  612 attattatta 621  Q
    ||||||||||    
T  27904134 attattatta 27904125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 414 - 621
Target Start/End: Complemental strand, 48643395 - 48643186
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnn-gtttagattccaaccctgtaaattaaaattctttg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |           |||||||||||||||||||||| ||| ||||||||    
T  48643395 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaaagtttagattccaaccctgtaaaataagattctttg 48643296  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| ||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| | ||||||||||    
T  48643295 attttagcccctgacttatgtgactgtacaaaattgctaacgtggcgagctgatgtggcatgctaactgtgcatatctgattatgtggcctgatgactgt 48643196  T
Q  612 attattatta 621  Q
    ||||||||||    
T  48643195 attattatta 48643186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 414 - 604
Target Start/End: Original strand, 50961357 - 50961548
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |          |||||||||||||||||||||| ||| ||||||| |    
T  50961357 ggttaatatgtatttaccccctgtaatttaggggagttccggtttaccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataagattctttaa 50961456  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtga 604  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  50961457 ttttagcccctgacctatgtgactgtgcagaattgctgacgtgacgagctgatgtggcatgctgactgtgcatatctgattatgtggcgtga 50961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 16831044 - 16830904
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  16831044 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 16830946  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||| |||||||| ||||||||| |||| ||||||||| ||||    
T  16830945 actatgcatatctgattatgtggcgtgctgactgtataatta 16830904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 10375453 - 10375310
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctga 577  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||    
T  10375453 tttagattccaaccctgtaaaataagattctttgattttagcccctgacctatgtgactatgcagaattgctgacatggcgagctgatgtggcatactga 10375354  T
Q  578 ctgtgcatatcggattatgtgacgtgatgactgtattattatta 621  Q
    || |||||||| ||||||||| ||| |||| |||||||||||||    
T  10375353 ctatgcatatctgattatgtggcgtaatgattgtattattatta 10375310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 27361451 - 27361590
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27361451 gtttagattccaaccctgtaaaataagattctttgattttag-ccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 27361548  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| | ||||||| ||||    
T  27361549 actgtgcatatctgattatgtggcgtgctaactgtataatta 27361590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 46624671 - 46624811
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  46624671 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 46624769  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||| ||| ||||    
T  46624770 actgtgcatatctgattatgtggcgtgctgactatataatta 46624811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 49763692 - 49763552
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  49763692 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 49763594  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    | |||||||||  ||||||||| |||| ||||||||| ||||    
T  49763593 attgtgcatatttgattatgtggcgtgctgactgtataatta 49763552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 22058766 - 22058904
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctga 577  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||||  |||||| |||||| |||||||||||||| |||||||| |||||||||||    
T  22058766 tttagattccaaccctgtaaaataagattctttgattttagcccctgactcatgtga-tgtgcagaattgctgacgtggtgagctgat-tggcatgctga 22058863  T
Q  578 ctgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||    
T  22058864 ctgtgcatatctgattatgtggcgtgctgactgtataatta 22058904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 477 - 581
Target Start/End: Complemental strand, 20160410 - 20160307
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||||||||| |||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||    
T  20160410 gtttagattccaaccttgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggtgggctga-gtggcatgctg 20160312  T
Q  577 actgt 581  Q
    |||||    
T  20160311 actgt 20160307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 477 - 617
Target Start/End: Original strand, 36631034 - 36631161
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||             |||||||||||    
T  36631034 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacctatgtgaccgtgcagaattgctgac-------------gtggcatgctg 36631120  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatt 617  Q
    |||||||||||| | ||||||| ||||||||||||||||||    
T  36631121 actgtgcatatctggttatgtggcgtgatgactgtattatt 36631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 477 - 603
Target Start/End: Original strand, 7377421 - 7377546
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| |||||||| |||| ||||| || |||||||||||||| ||||||| ||| |||| ||    
T  7377421 gtttagattccaaccctataaaataagattctttgattttagcccctgacccatgtcactgttcagaattgctgacgtggtgagctga-gtgtcatgttg 7377519  T
Q  577 actgtgcatatcggattatgtgacgtg 603  Q
    ||| |||| ||| ||||||||| ||||    
T  7377520 actatgcaaatctgattatgtggcgtg 7377546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 5830383 - 5830458
Alignment:
Q  26 gggggaagagaaccggtggccgtgagatagagagaaagacgtcgataggtggtggatggggtgagagaggcacgaa 101  Q
    |||||||||||||||||| |||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||    
T  5830383 gggggaagagaaccggtgtccgtgagatagagagaaagatgtcggttggtggtggatggggtgagagagggacgaa 5830458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 22059767 - 22059844
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  22059767 agggttggaatctaaactttt-tttttacagggggtaaatcggaactcacccaaattacagggggtaaagacatattaa 22059844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 27903036 - 27902951
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaattaa--gggggtaaagacatattaatccta 718  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||  ||||||||||||||||||| ||||    
T  27903036 agggttggaatctaaacttttatttttacaggggggtaaaccggaactcgcccaaattaaaggggggtaaagacatattaacccta 27902951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 404 - 598
Target Start/End: Original strand, 38174056 - 38174248
Alignment:
Q  404 taataattatggttaatatgtatttacc-cctgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaa 502  Q
    |||| |||| ||||||||||| |||||| ||||||| || |||||||||||||||| ||||| |          ||||||||| ||||||| |||| |||    
T  38174056 taattattagggttaatatgtctttacctcctgtaacttgggcgagttccggtttaccccctgtaaaaaaaa--gtttagatttcaaccctataaaataa 38174153  T
Q  503 aattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtg 598  Q
     ||||||||||||||  |||||||  |||||||| |||| |||| |||||||||| || ||| || ||||||||||| ||||||||  ||||||||    
T  38174154 gattctttgattttaacccctgactcatgtgactatgcagaattactgacgtggcaagttga-gtcgcatgctgactatgcatatctcattatgtg 38174248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 49762667 - 49762583
Alignment:
Q  636 agggttggaatctaaacttttatttttacagc-gggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||||| ||| ||| ||||||||| |||||||| |||||||||||||||||||| ||||    
T  49762667 agggttggaatctaaacttttttttttacagcggggaaaaccggaactcgcccaaattacagggggtaaagacatattaacccta 49762583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 45459689 - 45459764
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    |||||||||||||||   | ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  45459689 ggttggaatctaaacaaatttttttacagggggtaaatcggaactcgtccaaattacaggggtaaagacatattaa 45459764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 48642141 - 48642064
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||||| || ||||||| || ||||||  |||||||  ||||||||||||||||||    
T  48642141 agggttggaatctaaacttttatttttatagggggtaaaccgaaactcgatcaaattacaggggtaaagacatattaa 48642064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 636 - 720
Target Start/End: Original strand, 16831028 - 16831115
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaat 720  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  ||||||||||||||||||||| ||||||    
T  16831028 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaagggggtaaagacatattaaccctaat 16831115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 636 - 710
Target Start/End: Original strand, 50962650 - 50962726
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatat 710  Q
    |||||||||||||||||||||||||||||| | ||||||| |||| |||| |||||||| |||||||||||||||||    
T  50962650 agggttggaatctaaacttttatttttacaggggggtaaaccggatctcgcccaaattacagggggtaaagacatat 50962726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 732
Target Start/End: Complemental strand, 20159303 - 20159206
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaa--gggggtaaagacatattaatcctaataattataattaa 732  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||   ||||||||||||||||||| ||| ||  ||||||||||    
T  20159303 agggttggaatctaaactttt-tttttacagggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaacccttatttttataattaa 20159206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 21813826 - 21813747
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggc 557  Q
    |||||||| | |||||||||  ||| ||||||||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  21813826 tttagatttctaccctgtaacataagattctttgattttagcccctgacacatgtgaccgtgcataattgctgacgtggc 21813747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 725
Target Start/End: Complemental strand, 38174144 - 38174056
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaataatta 725  Q
    ||||||| |||||||||||||  |||||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||| |||||||||||    
T  38174144 agggttgaaatctaaactttt--ttttacagggggtaaaccggaactcgcccaagttacaggaggtaaagacatattaaccctaataatta 38174056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 50961437 - 50961359
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||  | |||||| |||||||||| |||||||||    
T  50961437 agggttggaatctaaacttttttttttacagggggtaaaccggaactcccctaaattacagggggtaaatacatattaa 50961359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 46625766 - 46625846
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||||||||||||| |||||||  | |||||||||||||||||||    
T  46625766 agggttggaatctaaacttttttttttacaggggggaaaatcggaactcgcccaaattacaggggggtaaagacatattaa 46625846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 27361467 - 27361387
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggg-gtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||||||||||||| |||||||| ||||| |||||||||||||||    
T  27361467 agggttggaatctaaacttttttttttacaggggggaaaatcggaactcgcccaaattacaggggagtaaagacatattaa 27361387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 415 - 466
Target Start/End: Complemental strand, 9775906 - 9775855
Alignment:
Q  415 gttaatatgtatttacccctgtaatttaggcgagttccggtttatcccctat 466  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  9775906 gttaatatatctttacccctgtaatttaggcgagttccggtttatctcctat 9775855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 564
Target Start/End: Complemental strand, 32976834 - 32976747
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    |||| |||| |||||  ||||| ||| ||||||||||||||  |||||| | ||||||||||||| ||||||||||||||| ||||||    
T  32976834 gtttcgatttcaaccacgtaaaataagattctttgattttaacccctgatccatgtgactgtgcagaattgctgacgtggcaagctga 32976747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 36632236 - 36632310
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||| || | ||||| ||||||||| ||||||| |  |||||||||||||||||    
T  36632236 ggttggaatctaaacttttatttttatagggagtaaaccggaactcgcccaaatt-acagggtaaagacatattaa 36632310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 48643314 - 48643393
Alignment:
Q  636 agggttggaatctaaac-ttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||| |||| ||||||||| ||||||| ||||||||| | |||||| |||||||||| |||||||||    
T  48643314 agggttggaatctaaactttttttttttacagggggtaaaccggaactcgcctaaattacagggggtaaatacatattaa 48643393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 719
Target Start/End: Original strand, 20160396 - 20160480
Alignment:
Q  638 ggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | ||||||||||||||||||| |||||    
T  20160396 ggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaaccctaa 20160480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 27362124 - 27362204
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | |||||||||||||||||||    
T  27362124 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 27362204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 49763676 - 49763756
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | |||||||||||||||||||    
T  49763676 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 49763756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 7378414 - 7378492
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||| ||||||||||||| ||||||||| ||||||| | |||||||||||||||  | ||||||||| |||||||||    
T  7378414 agggttgaaatctaaacttttttttttacag-gggtaaaccagaactcgtccaaattagaggggggtaaatacatattaa 7378492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 16829937 - 16829857
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-aggg-ggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| |||| ||||||||||||||||    
T  16829937 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagggaggtaaagacatattaa 16829857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 27904253 - 27904332
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||  | |||||  | ||||||||| |||||||||    
T  27904253 agggttggaatttaaacttttttttttacagggggtaaatcggaactcacctaaattacaggggggtaaatacatattaa 27904332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 711
Target Start/End: Original strand, 49664354 - 49664430
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatatt 711  Q
    |||||||||||||||||||||||||||| || |||||||  |||||||  |||||||| ||||| |||| |||||||    
T  49664354 agggttggaatctaaacttttatttttatagagggtaaactggaactcacccaaattacaggggataaatacatatt 49664430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 716
Target Start/End: Complemental strand, 9775043 - 9774964
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcc 716  Q
    ||||||||||||||||||||  ||| |||||  |||||| ||||||||  |||||||| |||||||||||||||| ||||||    
T  9775043 agggttggaatctaaacttt--tttgtacaggaggtaaaccggaactcacccaaattacagggggtaaagacatactaatcc 9774964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 464
Target Start/End: Complemental strand, 45459770 - 45459716
Alignment:
Q  410 ttatggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||||||| |||||||||||||||| | ||||||||| |||| |||||    
T  45459770 ttatggttaatatgtctttacccctgtaatttggacgagttccgatttaccccct 45459716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 464
Target Start/End: Complemental strand, 17865733 - 17865681
Alignment:
Q  414 ggttaatatgtatttac--ccctgtaatttaggcgagttccggtttatcccct 464  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||| |||||    
T  17865733 ggttaatatgtatttactcccctgtaatttgggcgagttccggtttaccccct 17865681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 719
Target Start/End: Original strand, 18149883 - 18149964
Alignment:
Q  639 gttggaatctaaacttttatttttacagcgg-gtaaatcggaactcgtccaaatta--agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||| ||||  ||||||||||| ||||||||||| ||| ||||||||  ||||||||||||||| ||||| ||||    
T  18149883 gttggaatctaaattttt--ttttacagcggagtaaatcggaattcgcccaaattacaagggggtaaagacatgttaattctaa 18149964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 713
Target Start/End: Complemental strand, 45459292 - 45459215
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgg-gtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||  || |||||| || || ||||| |||||||||||| ||||| ||||||||||||||||||||    
T  45459292 ggttggaatctaaacaattttttttaaaggggtgtaaaccggaactcgtcccaattacagggggtaaagacatattaa 45459215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 508 - 564
Target Start/End: Complemental strand, 18149875 - 18149819
Alignment:
Q  508 tttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    ||||||||||| | |||||  || |||||||||| ||||||||||||||||||||||    
T  18149875 tttgattttagcctctgactcatatgactgtgcagaattgctgacgtggcgagctga 18149819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 722
Target Start/End: Complemental strand, 22058781 - 22058691
Alignment:
Q  636 agggttggaatctaaac---ttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaataa 722  Q
    ||||||||||||||||    |||| ||||||||  ||||||| || |||||| |||||||| |||||||||||||||||||| ||| ||||    
T  22058781 agggttggaatctaaatatattttttttttacaaggggtaaaccgaaactcgcccaaattacagggggtaaagacatattaacccttataa 22058691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 722
Target Start/End: Original strand, 38132676 - 38132728
Alignment:
Q  671 taaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaataa 722  Q
    |||| ||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  38132676 taaaccggaactcgcccaaattacagggggtaaagacatattaaccctaataa 38132728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 39910649 - 39910693
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggttta 458  Q
    ||||||| ||| ||||||||||||||||||||||||| |||||||    
T  39910649 ggttaatgtgtctttacccctgtaatttaggcgagtttcggttta 39910693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 459
Target Start/End: Complemental strand, 38132726 - 38132675
Alignment:
Q  409 attatggttaatatgtatttacccc-tgtaatttaggcgagttccggtttat 459  Q
    |||| ||||||||||| |||||||| |||||||| |||||||||||||||||    
T  38132726 attagggttaatatgtctttaccccctgtaatttgggcgagttccggtttat 38132675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 719
Target Start/End: Complemental strand, 46624687 - 46624601
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| |||||| | | ||| ||| || |||||| |||||||  | ||||||||||||||||||| |||||    
T  46624687 agggttggaatctaaacttttttttttataggggggaaaaccgaaactcgcccaaattacaggggggtaaagacatattaaccctaa 46624601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 6667406 - 6667360
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcg 684  Q
    ||||||||||||||||||| ||||||||| |||||||  ||||||||    
T  6667406 ggttggaatctaaacttttttttttacagggggtaaactggaactcg 6667360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 644 - 722
Target Start/End: Complemental strand, 10374209 - 10374128
Alignment:
Q  644 aatctaaacttttatttttaca--gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaataa 722  Q
    |||||||||||| |||||||||  | ||||||| | ||||||| |||||||| ||||| |||||||||||||| ||| ||||    
T  10374209 aatctaaactttcatttttacagggggggtaaaccagaactcgcccaaattacaggggttaaagacatattaacccttataa 10374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 618
Target Start/End: Original strand, 44913568 - 44913622
Alignment:
Q  564 atgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||||||||||||||||||||||||  | ||||||| |||| ||||||||| ||||    
T  44913568 atgtggcatgctgactgtgcatatatgcttatgtggcgtgctgactgtataatta 44913622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 49663512 - 49663466
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcg 684  Q
    |||||||| ||||||||||||||||||||  ||||||| ||||||||    
T  49663512 ggttggaagctaaacttttatttttacaggaggtaaattggaactcg 49663466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 450
Target Start/End: Complemental strand, 45151390 - 45151353
Alignment:
Q  413 tggttaatatgtatttacccctgtaatttaggcgagtt 450  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  45151390 tggttaatatgtctttacctctgtaatttaggcgagtt 45151353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 48642061 - 48642114
Alignment:
Q  413 tggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccctat 466  Q
    |||||||||||| ||||||||||||||||   |||||| ||||||| |||||||    
T  48642061 tggttaatatgtctttacccctgtaatttgatcgagtttcggtttaccccctat 48642114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 4e-65; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 414 - 621
Target Start/End: Complemental strand, 15993826 - 15993618
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |          |||||||||||||||||||||| || ||||||||||    
T  15993826 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaatgtttagattccaaccctgtaaaatacaattctttga 15993727  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
    |||||| ||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  15993726 ttttagcccctgccatatgtgactgtgcaaaattgctgacgtggcgagctgatgtggcatgctgacagtgcatatctgattatgtggcgtgatgactgta 15993627  T
Q  613 ttattatta 621  Q
    |||||||||    
T  15993626 ttattatta 15993618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 416 - 614
Target Start/End: Complemental strand, 35359345 - 35359143
Alignment:
Q  416 ttaatatgtatttacccctgt-aatttaggcgagttccggtttatcccc---tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||   ||           |||||||||||||||||||||| ||| ||||||||    
T  35359345 ttaatatgtatttacccctcttaatttaggcgagttccggtttatccccctgtaaaaacaaaagagtttagattccaaccctgtaaaataagattctttg 35359246  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  35359245 attttagcccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatctgattatgtggcgtgatgactgt 35359146  T
Q  612 att 614  Q
    |||    
T  35359145 att 35359143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 11847091 - 11846947
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |    
T  11847091 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacctatgtgactgtgcagaattgctgacgtggcgagctgatatggcatgcag 11846992  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattattatta 621  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||    
T  11846991 actgtgcatatctgattatgtggcgtgatgactgtattattatta 11846947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 7469235 - 7469095
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  7469235 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 7469137  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  7469136 actgtgcatatctgattatgtggcgtgctgactgtataatta 7469095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 28241808 - 28241668
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  28241808 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 28241710  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  28241709 actgtgcatatttgattatgtggcgtgctgactgtataatta 28241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 414 - 618
Target Start/End: Complemental strand, 39050697 - 39050492
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||| ||||||||  |||||||| |||||||||||||||  ||||| |          ||||||||||||| |||||||| ||| ||||||||    
T  39050697 ggttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaatcctgtaaaataagattctttg 39050598  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||| |||||||    
T  39050597 attttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctgactgtgaatatctgattatgtggcgtgctgactgt 39050499  T
Q  612 attatta 618  Q
    || ||||    
T  39050498 ataatta 39050492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 414 - 618
Target Start/End: Original strand, 32040954 - 32041158
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |          |||||||||| ||  ||||||| ||| |||||||||    
T  32040954 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaagtttagattcaaattctgtaaaataagattctttga 32041053  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
    |||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||    
T  32041054 ttttagcccctgacctatgtgaccgtgcataattgcagacgtggggagctgatgtgg-atgttgactgtgcaattctgattatgtggcgtgatgactgta 32041152  T
Q  613 ttatta 618  Q
    ||||||    
T  32041153 ttatta 32041158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 27251110 - 27250970
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  27251110 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 27251012  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  27251011 actgtgcatatttgattatgtggcgtgctgactgtataatta 27250970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 414 - 618
Target Start/End: Complemental strand, 44378758 - 44378553
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||  ||||| |          |||||||||||||||| ||||  ||| ||||||||    
T  44378758 ggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccccgtaacataagattctttg 44378659  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| | || |||||||    
T  44378658 attttagcccctgacacatgtgtctgtgcataattgctgacgtggcgagctga-gtggcatgctgactgtgcatatacgattatgtggcatgctgactgt 44378560  T
Q  612 attatta 618  Q
    || ||||    
T  44378559 ataatta 44378553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 414 - 618
Target Start/End: Complemental strand, 44387625 - 44387420
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||  ||||| |          |||||||||||||||| ||||  ||| ||||||||    
T  44387625 ggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccccgtaacataagattctttg 44387526  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| | || |||||||    
T  44387525 attttagcccctgacacatgtgtctgtgcataattgctgacgtggcgagctga-gtggcatgctgactgtgcatatacgattatgtggcatgctgactgt 44387427  T
Q  612 attatta 618  Q
    || ||||    
T  44387426 ataatta 44387420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 495 - 618
Target Start/End: Complemental strand, 29675628 - 29675506
Alignment:
Q  495 taaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggatta 594  Q
    |||| ||| |||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  29675628 taaaataagattctttggttttagcccctgacccatgtgactgtacataattgctgacgtggcgagctga-gtggcatgctgactgtgcatatctgatta 29675530  T
Q  595 tgtgacgtgatgactgtattatta 618  Q
    |||| |||| ||||||||| ||||    
T  29675529 tgtggcgtgctgactgtataatta 29675506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 414 - 614
Target Start/End: Complemental strand, 37747479 - 37747291
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | || |           |||||||||||||||||||||| ||| ||| |||||    
T  37747479 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttacctcccagtaaaaaaaaagtttagattccaaccctgtaaaataagattatttga 37747380  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
    |||||| ||||||||||||||||||||||||||||||||||             |||||||||||||||||| ||| ||||||||| |||||||||||||    
T  37747379 ttttagcccctgacctatgtgactgtgcataattgctgacg-------------tggcatgctgactgtgcaaatctgattatgtggcgtgatgactgta 37747293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 479 - 621
Target Start/End: Complemental strand, 11652468 - 11652327
Alignment:
Q  479 ttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgac 578  Q
    |||||||||||||||||||| ||| ||| ||||||||||| |||||||  ||||||||| |||||||||||| |||| | |||||| |||||||||||||    
T  11652468 ttagattccaaccctgtaaaataagattatttgattttagcccctgactcatgtgactgagcataattgctggcgtgacaagctga-gtggcatgctgac 11652370  T
Q  579 tgtgcatatcggattatgtgacgtgatgactgtattattatta 621  Q
    | |||||||| ||||||| | |||| ||||||||| |||||||    
T  11652369 tatgcatatctgattatgcggcgtggtgactgtataattatta 11652327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 477 - 613
Target Start/End: Complemental strand, 36710434 - 36710298
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||| ||||||||| || ||| ||| ||||||||||| |||||| |||||||||| || | ||||||||||||||| |||||||||| |||||||    
T  36710434 gtttagatttcaaccctgtcaaataagattatttgattttagcccctgatctatgtgactatgtagaattgctgacgtggctagctgatgtgtcatgctg 36710335  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtat 613  Q
    ||| |||||||| ||||| ||| |||| |||||||||    
T  36710334 actatgcatatctgattaggtggcgtgctgactgtat 36710298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 477 - 603
Target Start/End: Complemental strand, 21521514 - 21521389
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||||||| |||||||| ||| ||||||||||||||| |||| ||| |||||||| |||| |||||||||||||||||| ||| |||||||| ||    
T  21521514 gtttagattccaatcctgtaaaataagattctttgattttagcccctaacccatgtgactttgcagaattgctgacgtggcgagttga-gtggcatgttg 21521416  T
Q  577 actgtgcatatcggattatgtgacgtg 603  Q
     || |||||||| ||||||||| ||||    
T  21521415 tctatgcatatctgattatgtggcgtg 21521389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 30467536 - 30467396
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||| ||||| | |||| ||| |||||||||||||| ||||||||  || |||||||||| |||||||||||||||||||||| || | ||  ||    
T  30467536 gtttagattacaaccttataaaataagattctttgattttaatccctgactcatctgactgtgcagaattgctgacgtggcgagctga-gtagtatcttg 30467438  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||| |||||||| |||||||||||||| ||||||||| ||||    
T  30467437 actatgcatatctgattatgtgacgtgctgactgtataatta 30467396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 477 - 613
Target Start/End: Original strand, 48989343 - 48989478
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| ||  |||| ||||||||||||| || ||||||||||| ||||||| || ||||||||    
T  48989343 gtttagattccaaccctgtaaaataagattttttgattttagccctcgacccatgtgactgtgcagaactgctgacgtggtgagctga-gtagcatgctg 48989441  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtat 613  Q
    | |||| ||||| | ||||||| |||| |||||||||    
T  48989442 attgtgtatatctgcttatgtggcgtgctgactgtat 48989478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 35357534 - 35357456
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  35357534 agggttagaatctaaacttttatttttacagggggtaaaccggaactcgtccaaattatagggggtaaagacatattaa 35357456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 565
Target Start/End: Complemental strand, 44523517 - 44523429
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgat 565  Q
    |||||||||||||||||||||| ||| ||||||| ||||||| ||||||||  |||||||||| | |||||||||||||||||||||||    
T  44523517 gtttagattccaaccctgtaaaataagattctttaattttagcccctgacccttgtgactgtgtagaattgctgacgtggcgagctgat 44523429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 477 - 556
Target Start/End: Complemental strand, 23152107 - 23152028
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtgg 556  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  23152107 gtttagattacaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcagaattgctgacgtgg 23152028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 32042945 - 32043022
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  32042945 agggttgaaatctaaacttttatttttacag-gggtaaaccgaaactcgtccaaattacagggggtaaagacatattaa 32043022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 37746139 - 37746061
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||| |||||||||| ||||||| ||||||||||||    
T  37746139 agggttggaatctaaacttttatttttacaggggataaaccggaacttgtccaaattacagggggtgaagacatattaa 37746061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 555
Target Start/End: Complemental strand, 6907251 - 6907174
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtg 555  Q
    |||| ||||||||||| |||| ||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  6907251 tttaaattccaaccctataaaataagattctttgattttaatccatgacctatgtgactgtgcagaattgctgacgtg 6907174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 15992411 - 15992332
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||  | |||||||||||||||||||    
T  15992411 agggttgaaatctaaacttttatttttacagggggtaaaccggaactcgcccaaattacaggggggtaaagacatattaa 15992332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 638 - 713
Target Start/End: Complemental strand, 11651419 - 11651343
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||| ||||||||||| | ||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  11651419 ggttgaaatctaaacttctttttttacagggggtaaaccggaactcgcccaaattacagggggtaaagacatattaa 11651343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 7468146 - 7468067
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| |||  ||| ||||||||| |||||||| ||||||||||||||||||||    
T  7468146 agggttggaatctaaacttttttttttacagggggaaaaaccggaactcgcccaaattacagggggtaaagacatattaa 7468067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 28240749 - 28240670
Alignment:
Q  636 agggttggaatctaaacttttatttttacag-cgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||||  ||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  28240749 agggttggaatctaaacttttttttttacagaggggaaaaccggaactcgcccaaattacagggggtaaagacatattaa 28240670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 15993746 - 15993824
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||| ||| ||||||||| ||||||| ||||||||| | |||||| |||||||||| |||||||||    
T  15993746 agggttggaatctaaacatttttttttacagggggtaaaccggaactcgcctaaattacagggggtaaatacatattaa 15993824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 640 - 713
Target Start/End: Complemental strand, 39174340 - 39174267
Alignment:
Q  640 ttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||| |||||||| || |||||||||||||||||    
T  39174340 ttggaatctaaacttttatttttacag-gggtaaaccagaactcgcccaaattacagtgggtaaagacatattaa 39174267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 48989359 - 48989282
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| ||||||| || || ||| |||||||| ||||||||||||||||||||    
T  48989359 agggttggaatctaaactttt-tttttacagggggtaaaccgaaagtcgcccaaattacagggggtaaagacatattaa 48989282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 640 - 713
Target Start/End: Original strand, 39050620 - 39050695
Alignment:
Q  640 ttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||  | |||||||||||||||||||    
T  39050620 ttggaatctaaacttttttttttacagggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 39050695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 7469219 - 7469298
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatc-ggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||| || ||| ||| | ||||||||||||||||| |||||||||| |||||||||    
T  7469219 agggttggaatctaaacttttttttttatagggggaaaaactggaactcgtccaaattacagggggtaaaaacatattaa 7469298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 715
Target Start/End: Original strand, 11652454 - 11652533
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatc 715  Q
    |||||||||||||||  |||| |||||||||  |||||| ||||||||| ||||||||  || |||||||||||||||||    
T  11652454 agggttggaatctaattttttttttttacaggcggtaaaccggaactcgcccaaattataggagtaaagacatattaatc 11652533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 713
Target Start/End: Complemental strand, 32041027 - 32040956
Alignment:
Q  643 gaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||| ||||||||| ||||||| ||||||||| | |||||| |||||||||| |||||||||    
T  32041027 gaatctaaacttttttttttacagggggtaaaccggaactcgcctaaattacagggggtaaatacatattaa 32040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 637 - 713
Target Start/End: Original strand, 44378678 - 44378756
Alignment:
Q  637 gggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||  | ||||||||| |||||||||    
T  44378678 gggttggaatctaaacttttttttttacagggggaaaaccggaactcgcccaaattagaggggggtaaatacatattaa 44378756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 637 - 713
Target Start/End: Original strand, 44387545 - 44387623
Alignment:
Q  637 gggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||  | ||||||||| |||||||||    
T  44387545 gggttggaatctaaacttttttttttacagggggaaaaccggaactcgcccaaattagaggggggtaaatacatattaa 44387623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 718
Target Start/End: Original strand, 27251094 - 27251179
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaat--taagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| ||||||  || ||||||||||||||||||| ||||    
T  27251094 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattataggggggtaaagacatattaacccta 27251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 44377545 - 44377460
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||| ||||||||||||| |||||||| | ||||||| ||||||||| |||||||  | ||||||||||||||||||| ||||    
T  44377545 agggttgaaatctaaacttttttttttacaggggggtaaaccggaactcgcccaaattacaggggggtaaagacatattaacccta 44377460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 44386412 - 44386327
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||| ||||||||||||| |||||||| | ||||||| ||||||||| |||||||  | ||||||||||||||||||| ||||    
T  44386412 agggttgaaatctaaacttttttttttacaggggggtaaaccggaactcgcccaaattacaggggggtaaagacatattaacccta 44386327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 636 - 712
Target Start/End: Complemental strand, 27250051 - 27249972
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-ag-ggggtaaagacatatta 712  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| || |||||||||||||||||    
T  27250051 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagcggggtaaagacatatta 27249972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 11845797 - 11845716
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatccta 718  Q
    ||||||| |||||||| |||||||||||||  ||||||| | ||||||| ||||||||  ||| |||||||||||||| ||||    
T  11845797 agggttgaaatctaaatttttatttttacaa-gggtaaaccagaactcgcccaaattactgggataaagacatattaacccta 11845716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 718
Target Start/End: Original strand, 26906460 - 26906538
Alignment:
Q  643 gaatctaaacttttattttt-acagcgggtaaatcggaactcgtccaaatta-aggggg-taaagacatattaatccta 718  Q
    |||||||||||||| ||||| |||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||    
T  26906460 gaatctaaactttttttttttacagagggaaaatcggaactcgcccaaattacagggggataaagacatattaacccta 26906538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 30917392 - 30917469
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| |||||| |||||||| |||| | ||| |||||||||    
T  30917392 agggttggaatctaaaccttt-tttttacagggggtaaatcgaaactcgcccaaattacagggaggaaaaacatattaa 30917469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 11651341 - 11651392
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||| |||||    
T  11651341 ggttaatatgtctttaccccctgtaatttgggcgagttccggtttaccccct 11651392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 37747399 - 37747477
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcg-ggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||| | | |||||| ||||||||| | |||||| |||||||||| |||||||||    
T  37747399 agggttggaatctaaactttt-tttttactgggaggtaaaccggaactcgcctaaattacagggggtaaatacatattaa 37747477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 464
Target Start/End: Complemental strand, 3628903 - 3628854
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| |||| || | |||||||||||||||||||||||||||||    
T  3628903 ggttaatatgtctttatcc-tataatttaggcgagttccggtttatcccct 3628854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 7468065 - 7468115
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccc 463  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||| |||||    
T  7468065 ggttaatatgtctttaccccctgtaatttgggcgagttccggtttttcccc 7468115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 35359264 - 35359345
Alignment:
Q  636 agggttggaatctaaa--cttttatttttacagcggg-taaatcggaactcgtccaaattaag-ggggtaaagacatattaa 713  Q
    ||||||||||||||||  ||||| ||||||||| ||| |||| ||||||||| | |||||||| |||||||| |||||||||    
T  35359264 agggttggaatctaaactcttttgtttttacagggggataaaccggaactcgcctaaattaagaggggtaaatacatattaa 35359345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 618
Target Start/End: Complemental strand, 813548 - 813495
Alignment:
Q  565 tgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||||||||||||||  | ||||||| |||| ||||||||| ||||    
T  813548 tgtggcatgctgactgtgcatatatgcttatgtggcgtgctgactgtataatta 813495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 458
Target Start/End: Complemental strand, 11847152 - 11847112
Alignment:
Q  420 tatgtatttacccc--tgtaatttaggcgagttccggttta 458  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  11847152 tatgtatttacccccctgtaatttaggcgagttccggttta 11847112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 15992330 - 15992382
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| ||||||||  |||||||| |||||||||||||||| |||||    
T  15992330 ggttaatatgtctttacccccctgtaatttgggcgagttccggtttaccccct 15992382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 28241792 - 28241849
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta 693  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||| | | ||||||||    
T  28241792 agggttggaatctaaacttttttttttacagggggaaaaccggaatttgcccaaatta 28241849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 30467522 - 30467596
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcg-ggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    ||||| |||||||||||||  |||||||| | |||||| || ||||||||||||||||||  |||||| ||||||||    
T  30467522 ggttgtaatctaaactttt--ttttacagggtggtaaaccgaaactcgtccaaattaaggatgtaaaggcatattaa 30467596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 414 - 614
Target Start/End: Original strand, 21075158 - 21075359
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |          ||||||||||||||| |||||| ||| |||||||||    
T  21075158 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttatcccctgtaaaaaaaaaagtttagattccaaccttgtaaaataagattctttga 21075257  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||    
T  21075258 ttttagtcgctgacctatgtgactgtgcagaattgctgacgtggcgagctgatttgacatgctgactgtgcatatctgattatgtggcgtgatgactgta 21075357  T
Q  613 tt 614  Q
    ||    
T  21075358 tt 21075359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 414 - 618
Target Start/End: Original strand, 48181825 - 48182031
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccc-tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattcttt 510  Q
    ||||||||||| ||||||||  |||||||| |||||||||||||||  |||| |||          |||||||||||||||||||||| ||| |||||||    
T  48181825 ggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctataaaaaaaaaagtttagattccaaccctgtaaaataagattcttt 48181924  T
Q  511 gattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactg 610  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||    
T  48181925 gattttagcccctgacccatgtgactgtgcataattgctgatgtggcgagctga-gtggcatgctgactgtgcatatctgattatgtggcgtgctgactg 48182023  T
Q  611 tattatta 618  Q
    ||| ||||    
T  48182024 tataatta 48182031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 414 - 617
Target Start/End: Original strand, 2711976 - 2712178
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttgat 513  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||             |||| ||||||||||||||||| ||| ||||||||||    
T  2711976 ggttaatatgtatttatccctgtaatttaggcgagttccggtttattcccctgtaaaaaaaaagtttcgattccaaccctgtaaaataagattctttgat 2712075  T
Q  514 tttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtat 613  Q
    ||||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||  |||||| || ||||||||||||||    
T  2712076 tttag-ccctgacctatatgactatgcagaattgctgacgtggcgagctgatgtggcatgttgactgtgtatatatgattatatggcgtgatgactgtat 2712174  T
Q  614 tatt 617  Q
    ||||    
T  2712175 tatt 2712178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 30607183 - 30607043
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  30607183 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 30607085  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  30607084 actgtgcatatttgattatgtggcgtgctgactgtataatta 30607043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 34423210 - 34423070
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  34423210 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 34423112  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  34423111 actgtgcatatttgattatgtggcgtgctgactgtataatta 34423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 25439116 - 25438976
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  25439116 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgctg 25439018  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||| |||||||| || |||||| |||| ||||||||| ||||    
T  25439017 actatgcatatctgactatgtggcgtgctgactgtataatta 25438976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 477 - 613
Target Start/End: Original strand, 23019067 - 23019202
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  23019067 gtttagattccaaccctgtaaaataagattatttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 23019165  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtat 613  Q
    |||||||||||  ||||||||| |||| |||||||||    
T  23019166 actgtgcatatttgattatgtggcgtgctgactgtat 23019202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 414 - 584
Target Start/End: Original strand, 468216 - 468388
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||| ||||             |||||||||||||||||| ||| ||| ||||||||    
T  468216 ggttaataggtatttacccccctgtaatttaggcgagttccggtttacccccctgtaaaaaaaaagtttagattccaaccctgaaaaataagattctttg 468315  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgca 584  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  468316 attttagcccctgacttatgtgactgtgcataattgctgacgtggcgagttgatgtggcatgctgactgtgca 468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 21020100 - 21020240
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||  |||||||||||| ||| |||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  21020100 gtttagatgacaaccctgtaaaataagattctttggttttagcccctgacccatgtgactgtacataattgctgacgtggcgagctga-gtggcatgctg 21020198  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  21020199 actgtgcatatctgattatgtggcgtgctgactgtataatta 21020240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 477 - 620
Target Start/End: Complemental strand, 46577073 - 46576931
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||  ||| |||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||||||  ||||||| ||    
T  46577073 gtttagattccaaccctgtaacataagattctttggttttagcccctgacacatgtgactgtgcataattgctgacgtgacgagctga-atggcatgttg 46576975  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||||    
T  46576974 actgtgcatatctgattatgtggcgtgctgactgtataattatt 46576931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 477 - 578
Target Start/End: Original strand, 40314282 - 40314382
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  40314282 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 40314380  T
Q  577 ac 578  Q
    ||    
T  40314381 ac 40314382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 477 - 578
Target Start/End: Original strand, 40324358 - 40324458
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  40324358 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 40324456  T
Q  577 ac 578  Q
    ||    
T  40324457 ac 40324458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 477 - 581
Target Start/End: Complemental strand, 10671494 - 10671391
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| || |||||||||||    
T  10671494 gtttagatttcaaccctgtaaaataagattctttgattttagcccctgactcatgtgactgtgcataattgctgacgtggcgagcaga-gtggcatgctg 10671396  T
Q  577 actgt 581  Q
    |||||    
T  10671395 actgt 10671391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 477 - 581
Target Start/End: Complemental strand, 10885134 - 10885031
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| || |||||||||||    
T  10885134 gtttagatttcaaccctgtaaaataagattctttgattttagcccctgactcatgtgactgtgcataattgctgacgtggcgagcaga-gtggcatgctg 10885036  T
Q  577 actgt 581  Q
    |||||    
T  10885035 actgt 10885031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 564
Target Start/End: Original strand, 33268257 - 33268344
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| | || ||||||||||||||||||||||    
T  33268257 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacctatgtgactatccaaaattgctgacgtggcgagctga 33268344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 481 - 618
Target Start/End: Complemental strand, 2569106 - 2568971
Alignment:
Q  481 agattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactg 580  Q
    ||||||||||||| |||| || | |||||| ||||||| |||||||| ||||||||||||| |||| ||||||||||||||||| |||||||| |||||     
T  2569106 agattccaaccctataaaataga-ttcttttattttagcccctgacccatgtgactgtgcagaattactgacgtggcgagctga-gtggcatgttgacta 2569009  T
Q  581 tgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||| ||||||||| | || ||||||||| ||||    
T  2569008 tgcatatctgattatgtggcttgctgactgtataatta 2568971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 477 - 564
Target Start/End: Complemental strand, 21464097 - 21464011
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||| ||||||||||||| |||||||||||||    
T  21464097 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactatgcataattgctg-cgtggcgagctga 21464011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 491 - 618
Target Start/End: Original strand, 48508369 - 48508495
Alignment:
Q  491 cctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcgg 590  Q
    |||||||| ||| ||||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||| | |||| ||||||||| |||||||| |    
T  48508369 cctgtaaaataagattctttgattttagcccctgacccatgtgactgtgtagaattgctgacgtggcgagctta-gtggtatgctgactatgcatatctg 48508467  T
Q  591 attatgtgacgtgatgactgtattatta 618  Q
    || ||||| |||| || |||||| ||||    
T  48508468 atgatgtggcgtgctggctgtataatta 48508495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 33269490 - 33269574
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  33269490 agggttgaaatctaaacttttatttttacagggggtaaaccggaactcgtccaaattataggggataaagacatattaaccctaa 33269574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 46079222 - 46079144
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||| |||||||||    
T  46079222 agggttggaatctaaacttttatttttacagggggtaaaccggaactcgcccaaattacagggggtaaaaacatattaa 46079144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 46080533 - 46080469
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgca 541  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  46080533 gtttagattccaaccctctaaaataagattctttgattttagcccctgacctatgtgactgtgca 46080469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 636 - 722
Target Start/End: Original strand, 53552269 - 53552358
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-aggg--ggtaaagacatattaatcctaataa 722  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||| ||||  |||||||||||||||| || |||||    
T  53552269 agggttgaaatctaaacttttatttttacagggggtaaaccggaactcgcccaaattacagggaaggtaaagacatattaacccaaataa 53552358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 636 - 716
Target Start/End: Original strand, 46577057 - 46577137
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcc 716  Q
    ||||||||||||||||||||| ||||||||| ||  ||| ||||||| |||||||||| |||||||||||||||||||||||    
T  46577057 agggttggaatctaaactttt-tttttacagaggaaaaaccggaacttgtccaaattacagggggtaaagacatattaatcc 46577137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 557
Target Start/End: Complemental strand, 42251479 - 42251399
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggc 557  Q
    ||||||||||||| | |||||| ||| ||||||| ||||||| ||||||| |||||||||||||| | |||||||||||||    
T  42251479 gtttagattccaatcttgtaaaataagattctttcattttagcccctgacttatgtgactgtgcagagttgctgacgtggc 42251399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 48183159 - 48183238
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  48183159 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagggggtaaagacatattaa 48183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 1968204 - 1968279
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||    
T  1968204 ggttagaatctaaactttt-tttttacag-gggtaaatcggaactcgtccaaattacaagagggtaaagacatattaa 1968279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 638 - 719
Target Start/End: Complemental strand, 21075236 - 21075154
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||| ||||||||| || |||| ||||||||| | |||||| |||||||||| ||||||||| |||||    
T  21075236 ggttggaatctaaacttttttttttacaggggataaaccggaactcgcctaaattacagggggtaaatacatattaaccctaa 21075154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 25438013 - 25437928
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| ||||||||| |||  ||| |||||||||||||||||  | ||||||||||||||||||| ||||    
T  25438013 agggttggaatctaaacttttttttttacagggggaaaaaccggaactcgtccaaattacaggggggtaaagacatattaacccta 25437928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 34423194 - 34423280
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | ||||||||||||||||||| |||||    
T  34423194 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaaccctaa 34423280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 40314298 - 40314219
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| ||| ||||||||||||||||    
T  40314298 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggaggtaaagacatattaa 40314219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 40324374 - 40324295
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| ||| ||||||||||||||||    
T  40324374 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggaggtaaagacatattaa 40324295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 653 - 715
Target Start/End: Original strand, 2569107 - 2569169
Alignment:
Q  653 ttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatc 715  Q
    |||| |||||||||  |||||||||||||||| ||||||||  ||||||||||||||||||||    
T  2569107 ttttttttttacaggaggtaaatcggaactcgcccaaattacaggggtaaagacatattaatc 2569169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 719
Target Start/End: Complemental strand, 10670407 - 10670326
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    |||||||||||||||||||   ||||| ||| ||||||| ||||||||| |||||||| ||| |||||||||||||||| |||||    
T  10670407 agggttggaatctaaactt---ttttttcagggggtaaaccggaactcgcccaaattacaggaggtaaagacatattaaccctaa 10670326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 719
Target Start/End: Complemental strand, 10884046 - 10883965
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    |||||||||||||||||||   ||||| ||| ||||||| ||||||||| |||||||| ||| |||||||||||||||| |||||    
T  10884046 agggttggaatctaaactt---ttttttcagggggtaaaccggaactcgcccaaattacaggaggtaaagacatattaaccctaa 10883965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 21021202 - 21021282
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||||||| ||||||||| |||||||  | ||||||||| |||||||||    
T  21021202 agggttggaatctaaacttttttttttacaggggggtaaaccggaactcgcccaaattacaggggggtaaaaacatattaa 21021282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 25439100 - 25439179
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  |||||||||||||||||||||    
T  25439100 agggttggaatctaaactttt-tttttacaggggggaaaaccggaactcgcccaaattacaagggggtaaagacatattaa 25439179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 30607167 - 30607247
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | |||||||||||||||||||    
T  30607167 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 30607247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 708
Target Start/End: Original strand, 10671478 - 10671549
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacat 708  Q
    ||||||| ||||||||||||| ||||||||| ||| ||| || |||||| |||||||| ||||||||||||||    
T  10671478 agggttgaaatctaaactttt-tttttacaggggggaaaccgaaactcgcccaaattacgggggtaaagacat 10671549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 708
Target Start/End: Original strand, 10885118 - 10885189
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacat 708  Q
    ||||||| ||||||||||||| ||||||||| ||| ||| || |||||| |||||||| ||||||||||||||    
T  10885118 agggttgaaatctaaactttt-tttttacaggggggaaaccgaaactcgcccaaattacgggggtaaagacat 10885189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 641 - 713
Target Start/End: Original strand, 21077104 - 21077179
Alignment:
Q  641 tggaatctaaacttttatttttacagcgg-gtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||| || ||||| ||||||||| |||||||  | ||||||||| |||||||||    
T  21077104 tggaatctaaacttttatttttacaggggagtaaaccggaactcgcccaaattacaggggggtaaatacatattaa 21077179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 23019083 - 23019004
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| |||||| |||||| |||||||| ||||| |||| |||||||||    
T  23019083 agggttggaatctaaacttttttttttacaggggggaaaatcgaaactcgcccaaattacaggggataaaaacatattaa 23019004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 636 - 712
Target Start/End: Original strand, 23020124 - 23020203
Alignment:
Q  636 agggttggaatctaaac-ttttatttttac-agcgggtaaatcggaactcgtccaaatta-agggggtaaagacatatta 712  Q
    ||||||||||||||||| |||| ||||||| || ||| ||| ||||||||| |||||||| |||||||||||||||||||    
T  23020124 agggttggaatctaaactttttttttttacaagggggaaaaccggaactcgcccaaattacagggggtaaagacatatta 23020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 636 - 727
Target Start/End: Complemental strand, 34422135 - 34422041
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaataattata 727  Q
    ||||||||||||||||||||| |||||||| | ||| ||| || |||||| |||||||  | ||||||||||||||||||| ||| ||| |||||    
T  34422135 agggttggaatctaaacttttttttttacaggggggaaaaccgaaactcgcccaaattacaggggggtaaagacatattaacccttatatttata 34422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 30606108 - 30606023
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| |||||||| | ||| ||| || |||||| |||||||  | ||||||||||||||||||| ||||    
T  30606108 agggttggaatctaaacttttttttttacaggggggaaaaccgaaactcgcccaaattacaggggggtaaagacatattaacccta 30606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 48181907 - 48181827
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||| | | ||| ||| ||||||||| |||||||  | |||||||||||||||||||    
T  48181907 agggttggaatctaaacttttttttttataggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 48181827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 2856342 - 2856418
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||| ||||||||||||||||||||||   | |||| || ||||||||||||||| ||||| |||||| |||||||    
T  2856342 ggttgaaatctaaacttttatttttacatgtgataaaccgaaactcgtccaaattacaggggataaagatatattaa 2856418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 42250139 - 42250187
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcc 461  Q
    |||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  42250139 ggttaatatgtatttaccccctgtaatttgggcgagttccggttaatcc 42250187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 10670330 - 10670381
Alignment:
Q  414 ggttaatatgtatttacc-cctgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||| |||||    
T  10670330 ggttaatatgtctttacctcctgtaatttgggcgagttccggtttaccccct 10670381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 10883969 - 10884020
Alignment:
Q  414 ggttaatatgtatttacc-cctgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||| |||||    
T  10883969 ggttaatatgtctttacctcctgtaatttgggcgagttccggtttaccccct 10884020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 21077181 - 21077135
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggttta 458  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||    
T  21077181 ggttaatatgtatttacccccctgtaatttgggcgagttccggttta 21077135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 620
Target Start/End: Original strand, 33268340 - 33268387
Alignment:
Q  573 gctgactgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    |||||||||||||||| || |||||| ||||||||||||||| |||||    
T  33268340 gctgactgtgcatatctgaatatgtggcgtgatgactgtatttttatt 33268387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 42250217 - 42250141
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||| ||| ||||||||||||||||||  || | || ||||||||| |||||||| |||||||||| |||||||||    
T  42250217 agggttgaaatataaacttttatttttaca--ggattaaccggaactcgcccaaattacagggggtaaatacatattaa 42250141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 46079142 - 46079193
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||| |||||    
T  46079142 ggttaatatgtttttaccccctgtaatttgggcgagttccggtttaccccct 46079193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 2569167 - 2569125
Alignment:
Q  416 ttaatatgtatttacccctgtaatttaggcgagttccggttta 458  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||    
T  2569167 ttaatatgtctttacccctgtaatttgggcgagttccgattta 2569125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 4e-62; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 414 - 621
Target Start/End: Complemental strand, 26167279 - 26167072
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||| ||||| |          |||||||||||||||||||||| |||||||||||||    
T  26167279 ggttaatatgtctttaccccctgtaatttaggcgaattccggtttaccccctgtaaaaaaaaa-gtttagattccaaccctgtaaaataaaattctttga 26167181  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||    
T  26167180 ttttagcccctgacctatgtgactgtgcataattgctgacgtgacgagctgatgtggcatactgactgtgcatatctgcttatgtggcgtgatgactgta 26167081  T
Q  613 ttattatta 621  Q
    |||||||||    
T  26167080 ttattatta 26167072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 414 - 621
Target Start/End: Complemental strand, 23495797 - 23495590
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| ||||| |          | |||||||||||||||||||| ||| ||| |||||    
T  23495797 ggttaatatgtatttaccccctgtaatttaggcgagtttcggtttaccccctgtaaaaaaaaa-gattagattccaaccctgtaaaataagattatttga 23495699  T
Q  513 ttttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgta 612  Q
     ||||| ||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||||||| ||||||||  ||||| |||||||    
T  23495698 ctttagcccctgacctatgtgactgtacagaattgctgacgtggcgagctgaaatggcatgctgactgtgcatatctgattatgtagcgtgacgactgta 23495599  T
Q  613 ttattatta 621  Q
    |||||||||    
T  23495598 ttattatta 23495590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 24171778 - 24171638
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||| | |||||||||||    
T  24171778 gtttagattccaaccctgtaaaataagattctttggttttagcccctgacccatgtgactgtacataattgctgacgtggcgagct-aagtggcatgctg 24171680  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  24171679 actgtgcatatctgattatgtggcgtgctgactgtataatta 24171638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 477 - 613
Target Start/End: Complemental strand, 29860736 - 29860600
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||||||| |||||||| ||| ||||||||||||||  | |||||||||||||||||||| ||||||| ||| |||||||| |||| | ||| ||    
T  29860736 gtttagattccaatcctgtaaaataagattctttgattttaacctctgacctatgtgactgtgcagaattgctaacgcggcgagctaatgtagaatgttg 29860637  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtat 613  Q
    |||||||||||| ||||||||| | ||||||||||||    
T  29860636 actgtgcatatctgattatgtggcatgatgactgtat 29860600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 477 - 564
Target Start/End: Original strand, 28038850 - 28038937
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  28038850 gtttagattccaaccctgtaaaataagattctttgattttagcccctgaccgatgtgactgtgcataattgctgacgtggcgagctga 28038937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 38601419 - 38601340
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggg-gtaaagacatattaa 713  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||| |||||||||||||||    
T  38601419 agggttggaatctaaacttttatttttacagggggtaaaccggaactcgtcgaaattataggggtgtaaagacatattaa 38601340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 23494431 - 23494353
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||||||||  |||||| || |||||| |||||||| ||||||||||||||||||||    
T  23494431 agggttggaatctaaacttttatttttacaggaggtaaaccgaaactcgcccaaattacagggggtaaagacatattaa 23494353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 640 - 713
Target Start/End: Complemental strand, 26165954 - 26165880
Alignment:
Q  640 ttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||| |||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||    
T  26165954 ttggaatctaaacatttatttttacaggaggtaaatcggaactcgcccaaattatagggggtaaagacatattaa 26165880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 38601403 - 38601507
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| || ||||||||||||  | ||||| ||||||||||| | ||||| | |||||||||||||| |||||||| ||    
T  38601403 gtttagattccaaccctgtaaaataagatcctttgattttagctcatgacccatgtgactgtgtagaattgttaacgtggcgagctga-gtggcatgttg 38601501  T
Q  577 actgtg 582  Q
    ||||||    
T  38601502 actgtg 38601507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 636 - 720
Target Start/End: Complemental strand, 27988424 - 27988338
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaat 720  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||  | |||  |||||||||||||||||||||    
T  27988424 agggttggaatctaaatttttttttttacagggggtaaatcggaactcatccaaattacatgggaataaagacatattaatcctaat 27988338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 28039956 - 28040033
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  28039956 agggttggaatctaaactttt-tttttacagggggaaaaccggaactcgcccaaattacagggggtaaagacatattaa 28040033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 26167200 - 26167283
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||| ||| | |||||| |||||||||||||||||||| |||||    
T  26167200 agggttggaatctaaactttt-tttttacagggggtaaaccggaattcgcctaaattacagggggtaaagacatattaaccctaa 26167283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 18320927 - 18321007
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||  | ||| |||||||||||||||    
T  18320927 agggttggaatctaaacttttatttttacagggggttaaaccggaactcgcccaaattgcaggggagtaaagacatattaa 18321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 721
Target Start/End: Original strand, 39274586 - 39274671
Alignment:
Q  638 ggttggaatctaaacttttatttttacag-cgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaata 721  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||||| |||||||| ||||  |||||||||||||| |||||||    
T  39274586 ggttggaatctaaacttttttttttacagaggggtaaaccggaactcgcccaaattacagggactaaagacatattaaccctaata 39274671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 719
Target Start/End: Complemental strand, 5117868 - 5117786
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||| ||||||||||| | ||||||||| | ||||| ||||||||| | |||||| |||||||||||||||||||| |||||    
T  5117868 ggttgaaatctaaacttatttttttacagagagtaaaccggaactcgcctaaattacagggggtaaagacatattaaccctaa 5117786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 24170681 - 24170601
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||||||| ||||||||| |||||||  | ||||||||| |||||||||    
T  24170681 agggttggaatctaaacttttttttttacaggggggtaaaccggaactcgcccaaattacaggggggtaaaaacatattaa 24170601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 5117445 - 5117362
Alignment:
Q  636 agggttggaatctaaacttttatttttac-agcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| ||||||| || |||||||  |||||||  |||||||| |||||||||||||||||||| ||||    
T  5117445 agggttggaatctaaactttt-tttttacaagggggtaaactggaactcacccaaattacagggggtaaagacatattaacccta 5117362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 456
Target Start/End: Original strand, 7104547 - 7104589
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtt 456  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  7104547 ggttaatatgtctttacccctgtaatttgggcgagttccggtt 7104589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 23495718 - 23495795
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||| ||||| ||||||||| ||||||| || |||||| | |||||| |||||||||| |||||||||    
T  23495718 agggttggaatctaatctttt-tttttacagggggtaaaccgaaactcgcctaaattacagggggtaaatacatattaa 23495795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 28038866 - 28038789
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcg-ggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| | || ||| || |||||| ||||||||  ||||||||||||||||||    
T  28038866 agggttggaatctaaactttt-tttttacagggaggaaaaccgaaactcgcccaaattacaggggtaaagacatattaa 28038789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 713
Target Start/End: Original strand, 49116811 - 49116888
Alignment:
Q  639 gttggaatctaaacttttattttt--acagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||| |||| |||||  |||| ||||||| |||||||||  ||||||| ||||||||||||||||||||    
T  49116811 gttggaatctaaatttttttttttttacagggggtaaaccggaactcgctcaaattacagggggtaaagacatattaa 49116888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 5117790 - 5117835
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggttta 458  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||    
T  5117790 ggttaatatgtctttaccccctgtaatttaggcgagttccggttta 5117835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 518
Target Start/End: Complemental strand, 5118857 - 5118752
Alignment:
Q  414 ggttaatatgtatttaccc--ctgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||| |||||||  |||||||||||| ||||||||||||| ||||| |          ||||||||||||||||||||| |||| |||||||     
T  5118857 ggttaatatgtttttaccctcctgtaatttaggtgagttccggtttaccccctgtaaaaaaaaa-gtttagattccaaccctgtaatttaagattctttc 5118759  T
Q  512 attttag 518  Q
    |||||||    
T  5118758 attttag 5118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 718
Target Start/End: Original strand, 5118777 - 5118860
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agg-gggtaaagacatattaatccta 718  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||  | |||||| ||| ||||||| ||||||||| ||||    
T  5118777 agggttggaatctaaactttt-tttttacagggggtaaaccggaactcacctaaattacaggagggtaaaaacatattaacccta 5118860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 722
Target Start/End: Complemental strand, 7104623 - 7104540
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatcctaataa 722  Q
    ||||| |||||||| | || ||||||||| ||||||  ||||||||| ||||||||  |||||||||||||||||| || |||||    
T  7104623 ggttgaaatctaaattattttttttacagggggtaac-cggaactcgcccaaattacaggggtaaagacatattaacccaaataa 7104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 7104640 - 7104720
Alignment:
Q  636 agggttggaatctaaac-ttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||| |||| |||||||| | ||| ||| ||||||| |||||||||| |||| |||||||||||||||    
T  7104640 agggttggaatctaaactttttttttttacaggggggaaaaccggaacttgtccaaattacagggtgtaaagacatattaa 7104720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 457
Target Start/End: Original strand, 28038787 - 28038830
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggttt 457  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||    
T  28038787 ggttaatatgtctttacccctgtaatttgggcgagtttcggttt 28038830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 620
Target Start/End: Original strand, 34520030 - 34520085
Alignment:
Q  565 tgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    |||||||||||||||||||||||  | ||||||| |||| ||||||||| ||||||    
T  34520030 tgtggcatgctgactgtgcatatatgcttatgtggcgtgttgactgtataattatt 34520085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 706
Target Start/End: Original strand, 38602574 - 38602638
Alignment:
Q  640 ttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagac 706  Q
    |||||||||||||||||  ||||| || ||||||||||||||||| | ||||||  |||||||||||    
T  38602574 ttggaatctaaactttt--ttttagagggggtaaatcggaactcgcctaaattacaggggtaaagac 38602638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 456
Target Start/End: Original strand, 50563946 - 50563989
Alignment:
Q  414 ggttaatatgtatttacc-cctgtaatttaggcgagttccggtt 456  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  50563946 ggttaatatgtctttaccacctgtaatttaggcgagttccggtt 50563989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 426 - 464
Target Start/End: Complemental strand, 38602635 - 38602597
Alignment:
Q  426 tttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  38602635 tttacccctgtaatttaggcgagttccgatttaccccct 38602597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 460
Target Start/End: Complemental strand, 39747226 - 39747180
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatc 460  Q
    ||||||||| | |||||||||||||||| ||||||||| ||||||||    
T  39747226 ggttaatatatttttacccctgtaatttgggcgagttctggtttatc 39747180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 719
Target Start/End: Complemental strand, 46565337 - 46565257
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    |||||||||||||||   ||| ||||||||| ||||||||||||||||  |||||||| | |||||||| ||||||||| |||||    
T  46565337 agggttggaatctaa---tttttttttacag-gggtaaatcggaactcacccaaattataaggggtaaaaacatattaaccctaa 46565257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 510
Target Start/End: Original strand, 5117429 - 5117462
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattcttt 510  Q
    ||||||||||||||||||||| ||||||||||||    
T  5117429 gtttagattccaaccctgtaatttaaaattcttt 5117462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 24171762 - 24171842
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| | ||||||| |||||||  | ||||||||| |||||||||    
T  24171762 agggttggaatctaaacttttttttttacaggggggaaaaccagaactcgcccaaattacaggggggtaaaaacatattaa 24171842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 707
Target Start/End: Complemental strand, 49116465 - 49116400
Alignment:
Q  644 aatctaaacttttatttttacagcgg-gtaaatcggaactcgtccaaatta-agggggtaaagaca 707  Q
    ||||||||||||| ||||||||| || ||||| ||||||||| | |||||| ||||||||||||||    
T  49116465 aatctaaacttttttttttacaggggtgtaaaccggaactcgcctaaattacagggggtaaagaca 49116400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 116; Significance: 1e-58; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 414 - 621
Target Start/End: Original strand, 99614 - 99823
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccc-tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||          |||||||||||||||||||||| ||| ||||||||    
T  99614 ggttaatatgtatttaccccctgtaatttaggcgagttccagtttacccccctatgaaaaaaaaagtttagattccaaccctgtaaaataagattctttg 99713  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| || |||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||    
T  99714 attttagcccttgacctatgtgactgtgcaggattgctgacgtggcgagctgatgtggcatgttgactgtgcatatctgattatgtggcatgatgactgt 99813  T
Q  612 attattatta 621  Q
    ||||||||||    
T  99814 attattatta 99823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 100883 - 100969
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaa 719  Q
    ||||||| |||||||||||||||||||||| | ||||||| ||||||||| | |||||  | ||||||||||||||||||| |||||    
T  100883 agggttgaaatctaaacttttatttttacaggggggtaaaccggaactcgcctaaattacaggggggtaaagacatattaaccctaa 100969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 100965 - 100914
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccc 463  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||| ||||    
T  100965 ggttaatatgtctttacccccctgtaatttaggcgagttccggtttaccccc 100914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 112; Significance: 3e-56; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 414 - 621
Target Start/End: Original strand, 42090 - 42301
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccc---tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctt 509  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||    ||           |||||||||||||||||||||| ||| ||||||    
T  42090 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttacccctctgtaaaaaaaaaaaagtttagattccaaccctgtaaaataagattctt 42189  T
Q  510 tgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgact 609  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||    
T  42190 tgattttaggccctgacctatgtgactgtgcagaattgctgacgtggcgagctgatgtggcatgctgactgtgcatatttaattatgtggcgtgatgact 42289  T
Q  610 gtattattatta 621  Q
     |||||||||||    
T  42290 atattattatta 42301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 42173 - 42092
Alignment:
Q  636 agggttggaatctaaac--ttttatttttacag-cgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||||  |||| |||||||||  ||||||| ||||||||| | |||||| |||||||||| |||||||||    
T  42173 agggttggaatctaaacttttttttttttacagaggggtaaaccggaactcgcctaaattacagggggtaaatacatattaa 42092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 5e-55; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 414 - 614
Target Start/End: Original strand, 2403675 - 2403876
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||||  |          |||||||||||||||||||||| ||| ||||||||    
T  2403675 ggttaatatgtatttacccccctgtaatttaggcgagttccggtttacccccc-tataaaaaaaagtttagattccaaccctgtaaaataagattctttg 2403773  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||||    
T  2403774 attttagccgctgacctatgtgactgtgcagaattgctgacgtggcgagctgatgtgtcatgctgactgtgcgtatctgattatgtggcgtgatgactgt 2403873  T
Q  612 att 614  Q
    |||    
T  2403874 att 2403876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 614
Target Start/End: Complemental strand, 19635845 - 19635708
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||| |||||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  19635845 gtttaaattccaaccctgtaaaataagattctttgattttagcccctgatctatgtgactgtgtagaattgctgacgtggagagctgatgtggcatgctg 19635746  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtatt 614  Q
    |||||||||||| ||||||||| ||| |||||||||||    
T  19635745 actgtgcatatctgattatgtggcgtcatgactgtatt 19635708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 28562841 - 28562981
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||| ||||||||||||| ||| |||||||| |||||| | |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28562841 gtttagataccaaccctgtaaaataagattctttggttttagcctctgacccatgtgactgtgcataattgctgacgtggcgagatga-gtggcatgctg 28562939  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  28562940 actgtgcatatctgattatgtggcgtgctgactgtataatta 28562981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 28188178 - 28188318
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| | | |||  |||||| |||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  28188178 gtttagattccaaccctgtaaaataagactatttcgttttagcccctgacccatgtgactgtgcataattgctgacgtggcaagct-aagtggcatgctg 28188276  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  28188277 actgtgcatatctgattatgtggcgtgctgactgtataatta 28188318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 34491221 - 34491360
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||  || |||| ||    
T  34491221 gtttagattccaaccctgtaaaataagattctttggttttag-ccctgacccatgtgactgtgcataattgctgacgtggcgagctga-ctgacatgttg 34491318  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||||||||||||  |||||||| |||| ||||||||| ||||    
T  34491319 actgtgcatatctaattatgtggcgtgctgactgtataatta 34491360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 479 - 613
Target Start/End: Complemental strand, 3587687 - 3587554
Alignment:
Q  479 ttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgac 578  Q
    ||||||| |||||||||||| ||| ||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  3587687 ttagatttcaaccctgtaaaataagattctttaattttagcccctgacccatgtgactgtgcagaattgctgacgtgacgagctga-gtggcatgctgac 3587589  T
Q  579 tgtgcatatcggattatgtgacgtgatgactgtat 613  Q
    | |||||||| ||||||||| |||| | |||||||    
T  3587588 tatgcatatctgattatgtggcgtgctaactgtat 3587554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 477 - 620
Target Start/End: Original strand, 29056834 - 29056976
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||| ||||||||  ||||||||||||||| |||||| |||||||| ||    
T  29056834 gtttagattccaaccatgtaaaataagattctttgattttagtccctgacccatgcgactgtgctgaattgctgacgtggccagctga-gtggcatgttg 29056932  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    | |||||||||  ||||||||| |||| |||| |||| ||||||    
T  29056933 attgtgcatatttgattatgtggcgtgctgacagtataattatt 29056976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 493 - 598
Target Start/End: Complemental strand, 17141173 - 17141068
Alignment:
Q  493 tgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggat 592  Q
    |||||| ||| ||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||| |||||||| |||    
T  17141173 tgtaaaataagattctttgattttagcccctgacctatgtgcctgtgcagaattgttgacgtggcgagttgatgtggcatgctgactatgcatatctgat 17141074  T
Q  593 tatgtg 598  Q
    ||||||    
T  17141073 tatgtg 17141068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 416 - 621
Target Start/End: Original strand, 17183323 - 17183515
Alignment:
Q  416 ttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttgatt 514  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||| |          ||||||||||||||| |||||| ||| |||||||||||    
T  17183323 ttaatatgtatttaccccctgtaatttaggcgagttccgatttaccccctgtaaaaaaaaa-gtttagattccaaccttgtaaaataagattctttgatt 17183421  T
Q  515 ttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtatt 614  Q
    |||| | |||||||||||||||||||| ||||             |||||||||||||| |||||||||||| | ||||||||| |||||||||||||||    
T  17183422 ttagccactgacctatgtgactgtgcagaatt-------------gctgatgtggcatgatgactgtgcatagctgattatgtggcgtgatgactgtatt 17183508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 18867241 - 18867109
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga-tg----tggcat 572  Q
    ||||||||||||||||||||| ||| ||| ||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| ||    ||||||    
T  18867241 tttagattccaaccctgtaaaataagattatttgattttagcccctgacccatgtgactgtgcagaattgttgacgtggcgagctgagtggcactggcat 18867142  T
Q  573 gctgactgtgcatatcggattatgtgacgtgat 605  Q
    | ||||| ||||||||  ||||||||| |||||    
T  18867141 gttgactatgcatatctaattatgtgatgtgat 18867109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 637 - 718
Target Start/End: Complemental strand, 17139846 - 17139765
Alignment:
Q  637 gggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatccta 718  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||  ||||||||||||| |||| ||||    
T  17139846 gggttggaatctaaacttttttttttacagggggtaaaccggaactcgcccaaattacaggggtaaagacatgttaacccta 17139765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 555
Target Start/End: Complemental strand, 28744869 - 28744793
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtg 555  Q
    ||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  28744869 tttagattccaaccctgtaaaataagattatttgattttag-ccctgacctatgtgattgtgcagaattgctgacgtg 28744793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 638 - 717
Target Start/End: Complemental strand, 17183398 - 17183319
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcct 717  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||| |||||||||| |||||||||||||    
T  17183398 ggttggaatctaaactttt-tttttacagggggtaaatcggaactcgcctaaattacagggggtaaatacatattaatcct 17183319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 18325622 - 18325544
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||| |||||||||||||| ||||||||  ||||||| || |||||| |||||||| ||||||||||||||||||||    
T  18325622 agggttcgaatctaaacttttttttttacatggggtaaaccgaaactcgcccaaattacagggggtaaagacatattaa 18325544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 2405024 - 2405101
Alignment:
Q  638 ggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||||| | |||||| || |||||||||||||||||    
T  2405024 ggttggaatctaaacttttatttttacaggggggtaaaccggaactcgcctaaattacagagggtaaagacatattaa 2405101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 644 - 713
Target Start/End: Original strand, 5756381 - 5756450
Alignment:
Q  644 aatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||  |||||||||||||||| ||| ||||  | ||||||||||||||||    
T  5756381 aatctaaacttttatttttacaggaggtaaatcggaactcgcccacattaccgtggtaaagacatattaa 5756450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 34492391 - 34492476
Alignment:
Q  636 agggttggaatctaaacttttattttt-acagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||| ||||||||||||| ||||| |||| ||||||||||||||||| |||||||| |||| ||||| ||||||||| |||||    
T  34492391 agggttgaaatctaaactttttttttttacagggggtaaatcggaactcgcccaaattacagggagtaaaaacatattaaccctaa 34492476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 718
Target Start/End: Complemental strand, 28743719 - 28743637
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatccta 718  Q
    ||||||| |||||| |||||||||||||||| || |||| ||||||||| ||||||||  | | ||||||||||| |||||||    
T  28743719 agggttgaaatctacacttttatttttacaggggataaaccggaactcgcccaaattacagtgctaaagacatataaatccta 28743637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 713
Target Start/End: Complemental strand, 19634581 - 19634505
Alignment:
Q  639 gttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||||| ||||||| || |||||| | |||||  | ||||||||| |||||||||    
T  19634581 gttggaatctaaacttttatttttacagggggtaaaccgaaactcgcctaaattacaggggggtaaaaacatattaa 19634505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 644 - 719
Target Start/End: Complemental strand, 20400216 - 20400138
Alignment:
Q  644 aatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatta--agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||| ||||||||| ||| |||| || |||||| ||||||||  |||||||||||||||||||| |||||    
T  20400216 aatctaaacttttttttttacaggggggtaaaccgaaactcgcccaaattacaagggggtaaagacatattaaccctaa 20400138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 2405103 - 2405053
Alignment:
Q  414 ggttaatatgtatttaccc-ctgtaatttaggcgagttccggtttatcccc 463  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  2405103 ggttaatatgtctttaccctctgtaatttaggcgagttccggtttaccccc 2405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 17139768 - 17139818
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||    
T  17139768 ggttaacatgtctttacccctgtaatttgggcgagttccggtttaccccct 17139818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 19635912 - 19635867
Alignment:
Q  414 ggttaatatgtatttaccc-ctgtaatttaggcgagttccggttta 458  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||    
T  19635912 ggttaatatgtatttaccctctgtaatttaggcgagtttcggttta 19635867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 28189225 - 28189305
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | |||||||  |||||||| |||||||  | ||||||||| |||||||||    
T  28189225 agggttggaatctaaacttttttttttacaggggggtaaactggaactcgcccaaattacaggggggtaaaaacatattaa 28189305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 3587746 - 3587701
Alignment:
Q  419 atatgtatttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    |||||| |||||||||||||||| ||| |||| |||||||||||||    
T  3587746 atatgtctttacccctgtaatttgggcaagtttcggtttatcccct 3587701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 17184539 - 17184595
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta 693  Q
    ||||||| ||||||||||||||||||||| | ||||||| |||| |||| ||||||||    
T  17184539 agggttgaaatctaaacttttatttttac-gggggtaaaccggacctcgcccaaatta 17184595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 19634503 - 19634555
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| ||||||||  ||||||||||||||||| ||||||| |||||    
T  19634503 ggttaatatgtttttacccccctgtaatttaggcgagtttcggtttaccccct 19634555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 28743645 - 28743690
Alignment:
Q  419 atatgtatttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    |||||| |||| | ||||||||| ||||||||||||||||||||||    
T  28743645 atatgtctttagcactgtaatttgggcgagttccggtttatcccct 28743690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 5203774 - 5203630
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5203774 gtttagattccaaccctgtaaaataagattctttgattttagcctctgacctatgtgactgtgcagaattgctgacgtggcgagctgatgtggcatgctg 5203675  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattattatta 621  Q
    |||||||||||| |||| |||| | ||||||||||||||||||||    
T  5203674 actgtgcatatctgattgtgtggcttgatgactgtattattatta 5203630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 15249531 - 15249391
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  15249531 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 15249433  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||  ||||||||| |||| ||||||||| ||||    
T  15249432 actgtgcatatttgattatgtggcgtgctgactgtataatta 15249391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 43235952 - 43236092
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||||||| |||  |||||||||||    
T  43235952 gtttagattacaaccctgtaaaataagattctttgattttagcccctgacccatgtaactgtgcagaattgctgacgtggcgaactg-ggtggcatgctg 43236050  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    ||| |||||||| ||||||||| |||| ||||||||| ||||    
T  43236051 actatgcatatctgattatgtgtcgtgctgactgtataatta 43236092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 18748791 - 18748651
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||  ||||||||||||| ||||||||||||| |||||||| |||||||  ||    
T  18748791 gtttagattccaaccctgtaaaataagattctttgattttagaccctgactgatgtgactgtgcaaaattgctgacgtgacgagctga-gtggcataatg 18748693  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    | |||||||||| ||||||||| |||  ||||||||| ||||    
T  18748692 attgtgcatatctgattatgtgtcgtactgactgtataatta 18748651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 478 - 595
Target Start/End: Complemental strand, 42744098 - 42743982
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctga 577  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||| ||| |||    
T  42744098 tttagattccaaccctgtaaaataagattatttaattttagtccatgacccatgtgactgtgcataattgctgatgtggcgagctga-gtggtatggtga 42744000  T
Q  578 ctgtgcatatcggattat 595  Q
    | ||||||||| ||||||    
T  42743999 ccgtgcatatctgattat 42743982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 570
Target Start/End: Complemental strand, 18860275 - 18860182
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggc 570  Q
    ||||||||||||| | |||||| ||| ||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  18860275 gtttagattccaatcttgtaaaataagattctttgattttaacccctgacctatgtgattgtgcagaattgctgacgtggcgagctgatgtggc 18860182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 478 - 618
Target Start/End: Original strand, 9891721 - 9891860
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctga 577  Q
    |||||||| ||| |||||||| ||| ||| ||||||||||  |||||||||||||||||||||| ||||||||| |  ||||||||| |||||||| |||    
T  9891721 tttagatttcaatcctgtaaaataagattatttgattttaacccctgacctatgtgactgtgcagaattgctgatgctgcgagctga-gtggcatgttga 9891819  T
Q  578 ctgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    || |||||||  ||||||||| |||| ||||||||| ||||    
T  9891820 ctatgcatatgtgattatgtggcgtgctgactgtataatta 9891860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 544 - 621
Target Start/End: Complemental strand, 25980918 - 25980841
Alignment:
Q  544 attgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattattatta 621  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  25980918 attgatgacgtggcaagctgatgtggcatgttgactgtgcatatctgattatgtggcgtgatgactgtattattatta 25980841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 636 - 721
Target Start/End: Complemental strand, 5202811 - 5202724
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaatcctaata 721  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||| |||||||  ||||||||||| ||||||||| |||||||    
T  5202811 agggttggaatctaaacttttatttttacagggggtaaaccgaaactcgcccaaattacaagggggtaaaaacatattaaccctaata 5202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 25979667 - 25979590
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  25979667 agggttggattctaaacttttatttttacagggggtaaaccggaa-tcgcccaaattacagggggtaaagacatattaa 25979590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 18748775 - 18748854
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||||| | | ||||||| |||||||||||||||||| || || ||||||||||||||    
T  18748775 agggttggaatctaaacttttatttttagatgggggtaaaccggaactcgtccaaattacagaggttaaagacatattaa 18748854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 15249515 - 15249594
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| | ||||||| |||||||| ||||||||||||||||||||    
T  15249515 agggttggaatctaaacttttttttttacaggggggaaaaccagaactcgcccaaattacagggggtaaagacatattaa 15249594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 18695430 - 18695349
Alignment:
Q  636 agggttggaatctaaacttttatttttac-agcgggtaaatcggaactcgtccaaatta---agggggtaaagacatattaa 713  Q
    |||||||||||||| |||||||||||||| || ||||||| ||||||||| ||||||||    |||||||||||||||||||    
T  18695430 agggttggaatctatacttttatttttacaagggggtaaaccggaactcgcccaaattagagggggggtaaagacatattaa 18695349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 9894519 - 9894597
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||  |||| ||||||||| |  |||||||||||||| | |||||| ||||||||||||||||||||    
T  9894519 agggttggaatctaattttttttttttacagggaataaatcggaactcgcctaaattatagggggtaaagacatattaa 9894597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 712
Target Start/End: Complemental strand, 15248472 - 15248393
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatatta 712  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | ||||||||||||||||||    
T  15248472 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatatta 15248393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 715
Target Start/End: Complemental strand, 43235968 - 43235892
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaatc 715  Q
    ||||||| |||||||||||||  ||||| || ||||||| ||||||||||||||||||    ||||||||||||||||||    
T  43235968 agggttgtaatctaaactttt--ttttatag-gggtaaaccggaactcgtccaaattacataggtaaagacatattaatc 43235892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 477 - 620
Target Start/End: Complemental strand, 15839293 - 15839150
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  15839293 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacctatgtgactctgcagaattgctgacgtggcgagctgatgtggcatgatg 15839194  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattattatt 620  Q
    |||||||||| | ||||||||| |||||||| ||||||||||||    
T  15839193 actgtgcatagctgattatgtggcgtgatgattgtattattatt 15839150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 7122498 - 7122358
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  7122498 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgggctga-gtggcatgctg 7122400  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  7122399 actgtgcatatctgattatgtggcgtgctgactgtataatta 7122358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 21796603 - 21796463
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||     
T  21796603 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgcta 21796505  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  21796504 actgtgcatatctgattatgtggcgtgctgactgtataatta 21796463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 484 - 621
Target Start/End: Complemental strand, 30668904 - 30668767
Alignment:
Q  484 ttccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgc 583  Q
    |||||||| |||||| ||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30668904 ttccaaccatgtaaaataagattctttgattttagcccctgatctatgtgactgtgcataattgctgacgtggcgagatgatgtggcatgcttactgtgc 30668805  T
Q  584 atatcggattatgtgacgtgatgactgtattattatta 621  Q
    ||||| ||||||||| ||||||||||| ||||||||||    
T  30668804 atatctgattatgtggcgtgatgactgcattattatta 30668767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Complemental strand, 21716867 - 21716727
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||||||||     
T  21716867 gtttagattccaaccctgtaaaataagattctttgattttagcccctgatccatgtgactgtgcataattgctgacgtggcgagctga-gtggcatgcta 21716769  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  21716768 actgtgcatatctgattatgtggcgtgctgactgtataatta 21716727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 618
Target Start/End: Original strand, 31795885 - 31796025
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  31795885 gtttagattccaaccctgtaaaataagattctttggttttagcccctgacccatgtgactgtgcataattgctgatgtggcgagctga-gtggcatgctg 31795983  T
Q  577 actgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||    
T  31795984 actgtgcatatctgattatgtggcgtgctgactgtataatta 31796025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 414 - 618
Target Start/End: Original strand, 3370129 - 3370335
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccc-tatnnnnnnnnnngtttagattccaaccctgtaaattaaaattcttt 510  Q
    ||||||||||| ||||||||  |||||||| ||||||||||||||| ||||| | |          ||||||||| |||||||||||| ||| |||||||    
T  3370129 ggttaatatgtctttacccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaaaaagtttagatttcaaccctgtaaaataagattcttt 3370228  T
Q  511 gattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactg 610  Q
    |||||||| |||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||    
T  3370229 gattttagcccctgactcatgtgactgtgcataattgctgacgtgccgagctga-gtggcatgctgactgtgcatatctgattatgtggcgtgctgactg 3370327  T
Q  611 tattatta 618  Q
    ||| ||||    
T  3370328 tataatta 3370335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 414 - 618
Target Start/End: Original strand, 3859760 - 3859965
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttg 511  Q
    ||||||||||| ||||||||  |||||||| |||||||||||||||| ||||| |          |||||||||| ||||||||||| ||| ||||||||    
T  3859760 ggttaatatgtgtttacccccctgtaatttgggcgagttccggtttaccccctgtaaaaaaaaaagtttagattcgaaccctgtaaaataagattctttg 3859859  T
Q  512 attttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgt 611  Q
    ||||||| || ||||| ||||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||| |||  |||||||    
T  3859860 attttagcccatgacccatgtgactgtgcagaattgctgacgtggcgagctga-gtggcatgttgactatgcatatctgattatgtggcgtactgactgt 3859958  T
Q  612 attatta 618  Q
    || ||||    
T  3859959 ataatta 3859965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 477 - 603
Target Start/End: Original strand, 42536206 - 42536331
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctgatgtggcatgctg 576  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||  ||||| |||||||||||||||||||||| |||||||| ||    
T  42536206 gtttagattccaaccctgtaaaataagattctttgattttagcccctgacccatgtgaaagtgcagaattgctgacgtggcgagctga-gtggcatgttg 42536304  T
Q  577 actgtgcatatcggattatgtgacgtg 603  Q
    |||||||||||| ||||||||| ||||    
T  42536305 actgtgcatatctgattatgtggcgtg 42536331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 534 - 621
Target Start/End: Complemental strand, 40722803 - 40722717
Alignment:
Q  534 actgtgcataattgctgacgtggcgagctgatgtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattattatta 621  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  40722803 actgtgcataattgctgacgtggcgggctga-gtggcatgctgactgtgcatatctgattatgtggcgtgctgactgtatgattatta 40722717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 9618414 - 9618488
Alignment:
Q  27 ggggaagagaaccggtggccgtgagatagagagaaagacgtcgataggtggtggatggggtgagagaggcacgaa 101  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||    
T  9618414 ggggaagagaaccggtggccgtgagatagagagaaagatgtcggttggtggtggatggggtgagagagggacgaa 9618488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 636 - 712
Target Start/End: Complemental strand, 40721752 - 40721676
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatatta 712  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||  |||||||||||||||||    
T  40721752 agggttggaatctaaacttttttttttacagggggaaaaccggaactcgcccaaattacaggggtaaagacatatta 40721676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 479 - 564
Target Start/End: Complemental strand, 7006339 - 7006254
Alignment:
Q  479 ttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    ||||||| |||||||||||| ||| ||| ||||||||||| || ||||| || ||| |||||| ||||||||||||||||||||||    
T  7006339 ttagatttcaaccctgtaaaataagattatttgattttagcccttgacccatatgattgtgcagaattgctgacgtggcgagctga 7006254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 25642782 - 25642657
Alignment:
Q  416 ttaatatgtatttacccc--tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttgat 513  Q
    ||||||||| ||||||||  |||||||| ||||||||||||||||||||||||          |||||||||||||||| ||||| ||| ||| ||||||    
T  25642782 ttaatatgtctttacccccctgtaatttgggcgagttccggtttatcccctataaaaaaaac-gtttagattccaacccagtaaaataagattttttgat 25642684  T
Q  514 tttagtccctgacctatgtgactgtgc 540  Q
    ||||| |||| |||||||| |||||||    
T  25642683 tttagcccctcacctatgtcactgtgc 25642657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 3371302 - 3371381
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  3371302 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagggggtaaagacatattaa 3371381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 7121402 - 7121323
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  7121402 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacagggggtaaagacatattaa 7121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 538
Target Start/End: Complemental strand, 40728264 - 40728203
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgt 538  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| |||||||| ||||||||||    
T  40728264 gtttagattccaaccctttaaaataagattctttgattttagcccctgacccatgtgactgt 40728203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 3859841 - 3859762
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    |||||| |||||||||||||| ||||||||| ||||||| ||||||||| |||||||  | ||||||||| |||||||||    
T  3859841 agggttcgaatctaaacttttttttttacagggggtaaaccggaactcgcccaaattacaggggggtaaacacatattaa 3859762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 30668969 - 30668925
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggttta 458  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  30668969 ggttaatatgtatttatccctgtaatttaggcgagttccggttta 30668925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 21789631 - 21789552
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| ||||||||| |||  ||| ||||||||| | |||||| ||||||||||||||||||||    
T  21789631 agggttggaatctaaacttttttttttacagggggaaaaaccggaactcgcctaaattacagggggtaaagacatattaa 21789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 40728248 - 40728328
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||||||| |||||||  | |||||||||||||||||||    
T  40728248 agggttggaatctaaacttttttttttacaggggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 40728328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 21789550 - 21789600
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccc 463  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  21789550 ggttaatatgtctttaccccctgtaatttaggcgagttccggtttttcccc 21789600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Complemental strand, 3370211 - 3370131
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatt--aagggggtaaagacatattaa 713  Q
    ||||||| ||||||||||||| ||||||||| |||  ||| ||||||||| |||||||  | |||||||||||||||||||    
T  3370211 agggttgaaatctaaacttttttttttacagggggaaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 3370131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 7006325 - 7006401
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    ||||||| |||||||  | || ||||||||| ||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  7006325 agggttgaaatctaatttattttttttacag-gggtaaatcagaactcgcccaaattacaggggtaaagacatattaa 7006401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 720
Target Start/End: Complemental strand, 14212464 - 14212379
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcggg-taaatcggaactcgtccaaatta-aggggg-taaagacatattaatcctaat 720  Q
    ||||||||||||||||||| ||||||||| ||| |||| || |||||  |||||||| |||||| |||||||||||||| ||||||    
T  14212464 ggttggaatctaaacttttttttttacagggggctaaaccgaaactcacccaaattacagggggctaaagacatattaaccctaat 14212379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 637 - 714
Target Start/End: Original strand, 25642705 - 25642783
Alignment:
Q  637 gggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaa--gggggtaaagacatattaat 714  Q
    |||||||||||||||| ||| |||||| || || |||| ||||||||| ||||||||   ||||||||||||||||||||    
T  25642705 gggttggaatctaaacgttt-tttttataggggataaaccggaactcgcccaaattacaggggggtaaagacatattaat 25642783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 40721676 - 40721716
Alignment:
Q  417 taatatgtatttacccctgtaatttaggcgagttccggttt 457  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  40721676 taatatgtctttacccctgtaatttgggcgagttccggttt 40721716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 720
Target Start/End: Original strand, 7122482 - 7122568
Alignment:
Q  636 agggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-aggg-ggtaaagacatattaatcctaat 720  Q
    ||||||||||||||||||||| |||||| | | ||| ||| ||||||||| |||||||| |||| |||||||||||||||| ||||||    
T  7122482 agggttggaatctaaactttt-tttttataggggggaaaaccggaactcgcccaaattacagggaggtaaagacatattaaccctaat 7122568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 15839360 - 15839314
Alignment:
Q  414 ggttaatatgtatttacccc--tgtaatttaggcgagttccggttta 458  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||    
T  15839360 ggttaatatgtatttacccccctttaatttaggcgagttccggttta 15839314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 15839277 - 15839358
Alignment:
Q  636 agggttggaatctaaac-ttttatttttaca-gcgggtaaatcggaactcgtccaaattaa--gggggtaaagacatattaa 713  Q
    ||||||||||||||||| |||| |||||||| | ||||||| ||||||||| | |||||||  ||||||||| |||||||||    
T  15839277 agggttggaatctaaactttttttttttacaggggggtaaaccggaactcgcctaaattaaaggggggtaaatacatattaa 15839358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 451
Target Start/End: Complemental strand, 7006403 - 7006366
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttc 451  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  7006403 ggttaatatgtctttacccctgtaatttgggcgagttc 7006366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 7216592 - 7216649
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta 693  Q
    |||||||||||||||||||||  ||||| ||  |||||| ||||||||| ||||||||    
T  7216592 agggttggaatctaaactttttattttataggaggtaaaccggaactcgcccaaatta 7216649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 21716851 - 21716907
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta 693  Q
    ||||||||||||||||||||| ||||| ||| ||| ||| |||||||| |||||||||    
T  21716851 agggttggaatctaaactttt-ttttttcagggggaaaaccggaactcttccaaatta 21716907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 21796587 - 21796643
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta 693  Q
    ||||||||||||||||||||| ||||||||| ||  ||| |||||||| |||||||||    
T  21796587 agggttggaatctaaactttt-tttttacaggggaaaaaccggaactcttccaaatta 21796643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0862 (Bit Score: 60; Significance: 4e-25; HSPs: 3)
Name: scaffold0862
Description:

Target: scaffold0862; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 414 - 546
Target Start/End: Complemental strand, 2205 - 2072
Alignment:
Q  414 ggttaatatgtatttacccc-tgtaatttaggcgagttccggtttatcccctatnnnnnnnnnngtttagattccaaccctgtaaattaaaattctttga 512  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||  ||||| |          |||||||||||||||||||||| ||| |||||||||    
T  2205 ggttaatatgtatttaccccctgtaatttagaagagttccggtttgccccctgttaaaaaaaaagtttagattccaaccctgtaaaataagattctttga 2106  T
Q  513 ttttagtccctgacctatgtgactgtgcataatt 546  Q
    |||||| || ||||||||||||||||||||||||    
T  2105 ttttagcccttgacctatgtgactgtgcataatt 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0862; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 636 - 719
Target Start/End: Original strand, 2125 - 2209
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaatcctaa 719  Q
    ||||||||||||||||||||| |||| |||| ||| ||| |||||||| || |||||| |||||||||| ||||||||| |||||    
T  2125 agggttggaatctaaactttttttttaacagggggcaaaccggaactcttctaaattacagggggtaaatacatattaaccctaa 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0862; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 713
Target Start/End: Complemental strand, 764 - 687
Alignment:
Q  638 ggttggaatctaaacttttattttta-cagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||||||||||||||||||||||| | | ||||||| ||||||||  |||||||| | | ||||||||||||||||    
T  764 ggttggaatctaaacttttatttttaccggggggtaaaccggaactcacccaaattacaagaggtaaagacatattaa 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 4e-25; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 477 - 564
Target Start/End: Complemental strand, 54499 - 54412
Alignment:
Q  477 gtttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggcgagctga 564  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||    
T  54499 gtttagatttcaaccctgtaaaataagattctttgattttagcccctgacccatgtgactctgcataattgctgacgtggcgggctga 54412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 713
Target Start/End: Complemental strand, 53452 - 53375
Alignment:
Q  638 ggttggaatctaaacttttatttttaca-gcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    ||||||||||||||||||| |||||||| | ||| ||| || |||||| |||||||| ||||||||||||||||||||    
T  53452 ggttggaatctaaacttttttttttacaggggggaaaaccgaaactcgcccaaattacagggggtaaagacatattaa 53375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 54483 - 54561
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaa--gggggtaaagacatattaa 713  Q
    ||||||| ||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||   |||||||||||||||||||    
T  54483 agggttgaaatctaaactttt-tttttacagggggaaaaccggaactcgcccaaattacaggggggtaaagacatattaa 54561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 18983 - 19062
Alignment:
Q  478 tttagattccaaccctgtaaattaaaattctttgattttagtccctgacctatgtgactgtgcataattgctgacgtggc 557  Q
    |||||||| | |||||||||  ||| ||||||||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  18983 tttagatttctaccctgtaacataagattctttgattttagcccctgacacatgtgaccgtgcataattgctgacgtggc 19062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 566 - 618
Target Start/End: Original strand, 19058 - 19110
Alignment:
Q  566 gtggcatgctgactgtgcatatcggattatgtgacgtgatgactgtattatta 618  Q
    |||||||| |||||||||||||| ||||||||| |||| ||||||||| ||||    
T  19058 gtggcatgttgactgtgcatatctgattatgtggcgtgctgactgtataatta 19110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 636 - 713
Target Start/End: Original strand, 18733 - 18811
Alignment:
Q  636 agggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaatta-agggggtaaagacatattaa 713  Q
    |||||| |||||||||||||| ||||||||  ||||||| || |||||| |||||||| ||||||||||||||||||||    
T  18733 agggttcgaatctaaacttttttttttacatggggtaaaccgaaactcgcccaaattacagggggtaaagacatattaa 18811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 713
Target Start/End: Complemental strand, 1392 - 1318
Alignment:
Q  638 ggttggaatctaaacttttatttttacagcgggtaaatcggaactcgtccaaattaagggggtaaagacatattaa 713  Q
    ||||||||||||||||||| |||||||||  | |||| | |||||||| |||||| ||| ||||||||||||||||    
T  1392 ggttggaatctaaacttttttttttacag-agataaaccagaactcgttcaaattcaggaggtaaagacatattaa 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 17182 - 17231
Alignment:
Q  414 ggttaatatgtatttacccctgtaatttaggcgagttccggtttatcccct 464  Q
    ||||||||||| |||| || | |||||||||||||||||||||||||||||    
T  17182 ggttaatatgtctttatcc-tataatttaggcgagttccggtttatcccct 17231  T

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