View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3515_low_10 (Length: 238)
Name: NF3515_low_10
Description: NF3515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3515_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 5087823 - 5088035
Alignment:
| Q |
18 |
gggtttgtagttgaaagaattattggcattgcagatgagttcattaaggttagcttttattaatttctttctatagaaagaaagtttatgttttcaaatt |
117 |
Q |
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| T |
5087823 |
gggtttgtagttgaaagaattattggcattgcagatgagttcattaaggttagcttttattaatttctttctatagaaagaaagtttatgttttcaaatt |
5087922 |
T |
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| Q |
118 |
caaattttcttaaattatttttcatatatgttttcattccatattggatgatatttatgtcttatgaagtaattttggttcttttgtttggtttctcttg |
217 |
Q |
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| T |
5087923 |
caaattttcttaaattatttttcatatatgttttcattccatattggatgatatttatgtcttatgaagtaattttggttcttttgtttggtttctcttg |
5088022 |
T |
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| Q |
218 |
gaaattctagtcc |
230 |
Q |
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| T |
5088023 |
gaaattctagtcc |
5088035 |
T |
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