View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3516_low_30 (Length: 203)

Name: NF3516_low_30
Description: NF3516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3516_low_30
NF3516_low_30
[»] chr5 (20 HSPs)
chr5 (1-146)||(11983384-11983529)
chr5 (146-188)||(30777601-30777643)
chr5 (147-195)||(5612514-5612562)
chr5 (145-188)||(12852115-12852158)
chr5 (145-188)||(32707910-32707953)
chr5 (145-188)||(39690842-39690885)
chr5 (146-192)||(6243233-6243279)
chr5 (146-188)||(10656817-10656859)
chr5 (146-188)||(26716270-26716312)
chr5 (146-188)||(26986010-26986052)
chr5 (147-188)||(1795390-1795431)
chr5 (147-188)||(30918376-30918417)
chr5 (146-194)||(9792316-9792364)
chr5 (145-180)||(1639869-1639904)
chr5 (147-194)||(32624875-32624922)
chr5 (149-188)||(33829753-33829792)
chr5 (146-188)||(26795072-26795114)
chr5 (151-188)||(26691618-26691655)
chr5 (151-188)||(26961350-26961387)
chr5 (149-189)||(18002029-18002068)
[»] chr4 (15 HSPs)
chr4 (141-187)||(28376988-28377034)
chr4 (147-189)||(53322335-53322377)
chr4 (146-188)||(10257697-10257739)
chr4 (146-188)||(14795020-14795062)
chr4 (145-187)||(47607106-47607148)
chr4 (149-188)||(8064188-8064227)
chr4 (149-188)||(40694070-40694109)
chr4 (148-194)||(3403648-3403694)
chr4 (146-188)||(5834827-5834869)
chr4 (150-188)||(19738698-19738736)
chr4 (146-180)||(41145609-41145643)
chr4 (146-192)||(46432008-46432053)
chr4 (146-180)||(52122956-52122990)
chr4 (147-187)||(51674856-51674896)
chr4 (151-187)||(51858834-51858870)
[»] chr8 (22 HSPs)
chr8 (145-188)||(32877433-32877476)
chr8 (145-188)||(34901461-34901504)
chr8 (145-188)||(36483431-36483474)
chr8 (146-188)||(6028484-6028526)
chr8 (146-188)||(13422205-13422247)
chr8 (146-188)||(16384614-16384656)
chr8 (146-188)||(22201416-22201458)
chr8 (147-188)||(2872989-2873030)
chr8 (146-187)||(37372256-37372297)
chr8 (145-180)||(28876653-28876688)
chr8 (145-188)||(43771783-43771826)
chr8 (146-188)||(32759370-32759412)
chr8 (145-194)||(32677-32726)
chr8 (154-187)||(5818391-5818424)
chr8 (149-194)||(7411636-7411681)
chr8 (149-194)||(12357889-12357933)
chr8 (149-194)||(12359017-12359061)
chr8 (147-188)||(19436272-19436313)
chr8 (147-188)||(19572421-19572462)
chr8 (147-188)||(40412433-40412474)
chr8 (146-186)||(37668579-37668619)
chr8 (147-187)||(41099366-41099406)
[»] chr7 (23 HSPs)
chr7 (145-188)||(25969390-25969433)
chr7 (149-188)||(1043150-1043189)
chr7 (147-194)||(19510518-19510565)
chr7 (145-192)||(38262992-38263039)
chr7 (145-188)||(47238686-47238729)
chr7 (146-188)||(34238152-34238194)
chr7 (146-188)||(39520794-39520836)
chr7 (146-188)||(40095644-40095686)
chr7 (147-188)||(11829684-11829725)
chr7 (147-188)||(33454065-33454106)
chr7 (147-188)||(42896997-42897038)
chr7 (147-188)||(44960214-44960255)
chr7 (144-188)||(26773791-26773835)
chr7 (146-186)||(27353915-27353955)
chr7 (149-188)||(36758075-36758114)
chr7 (149-188)||(36767599-36767638)
chr7 (145-188)||(48163401-48163444)
chr7 (145-194)||(554953-555002)
chr7 (145-186)||(16850779-16850820)
chr7 (144-189)||(21179849-21179894)
chr7 (147-192)||(27555444-27555489)
chr7 (157-189)||(8028713-8028745)
chr7 (145-188)||(24956243-24956287)
[»] chr6 (10 HSPs)
chr6 (146-188)||(27083982-27084024)
chr6 (146-187)||(26327152-26327193)
chr6 (146-186)||(3212474-3212514)
chr6 (146-188)||(1036905-1036947)
chr6 (147-188)||(32130738-32130779)
chr6 (149-192)||(13607860-13607903)
chr6 (149-187)||(234306-234344)
chr6 (146-188)||(10894651-10894693)
chr6 (147-188)||(25834575-25834616)
chr6 (156-188)||(31741235-31741267)
[»] chr3 (29 HSPs)
chr3 (146-188)||(52121177-52121219)
chr3 (146-188)||(55269091-55269133)
chr3 (146-191)||(38889155-38889200)
chr3 (145-194)||(41742145-41742194)
chr3 (148-188)||(19420904-19420944)
chr3 (147-187)||(21006565-21006605)
chr3 (147-195)||(21157801-21157849)
chr3 (149-192)||(13748522-13748565)
chr3 (146-188)||(7327709-7327751)
chr3 (146-188)||(22611453-22611495)
chr3 (146-188)||(30787641-30787683)
chr3 (146-188)||(40497327-40497369)
chr3 (147-188)||(2122702-2122743)
chr3 (147-188)||(35389748-35389789)
chr3 (147-192)||(42464982-42465027)
chr3 (145-185)||(33238719-33238759)
chr3 (145-188)||(1679777-1679820)
chr3 (149-188)||(6134461-6134500)
chr3 (149-188)||(22289800-22289839)
chr3 (147-194)||(22310703-22310750)
chr3 (149-188)||(48122825-48122864)
chr3 (146-188)||(10225230-10225272)
chr3 (146-188)||(28704724-28704766)
chr3 (146-188)||(37996890-37996932)
chr3 (147-188)||(29915859-29915900)
chr3 (147-188)||(29965012-29965053)
chr3 (149-186)||(53192498-53192535)
chr3 (146-186)||(2567468-2567508)
chr3 (148-188)||(28882757-28882797)
[»] chr2 (25 HSPs)
chr2 (146-188)||(7807453-7807495)
chr2 (146-188)||(20536772-20536814)
chr2 (146-191)||(5588104-5588149)
chr2 (147-188)||(45159377-45159418)
chr2 (146-194)||(18300969-18301017)
chr2 (145-188)||(1776515-1776558)
chr2 (145-188)||(16561796-16561839)
chr2 (145-188)||(28746731-28746774)
chr2 (144-194)||(6124168-6124218)
chr2 (146-188)||(7876711-7876753)
chr2 (155-189)||(8482995-8483029)
chr2 (146-188)||(38602401-38602443)
chr2 (148-188)||(2319274-2319314)
chr2 (149-188)||(3563851-3563890)
chr2 (145-188)||(4170581-4170624)
chr2 (149-192)||(21104482-21104525)
chr2 (149-188)||(24585530-24585569)
chr2 (144-186)||(4355320-4355362)
chr2 (146-188)||(33324815-33324857)
chr2 (146-188)||(40308976-40309018)
chr2 (147-188)||(6497728-6497769)
chr2 (145-194)||(12819297-12819346)
chr2 (148-188)||(1005512-1005552)
chr2 (146-186)||(4561785-4561825)
chr2 (147-187)||(14824146-14824186)
[»] chr1 (17 HSPs)
chr1 (147-192)||(3708354-3708399)
chr1 (145-188)||(28949320-28949363)
chr1 (149-188)||(37104120-37104159)
chr1 (145-188)||(38330423-38330466)
chr1 (146-188)||(6916953-6916995)
chr1 (146-188)||(34096631-34096673)
chr1 (146-188)||(37346927-37346969)
chr1 (146-188)||(52895792-52895834)
chr1 (143-188)||(3426842-3426887)
chr1 (146-194)||(13013065-13013113)
chr1 (149-188)||(20409633-20409672)
chr1 (146-188)||(1043224-1043266)
chr1 (146-188)||(2472933-2472975)
chr1 (146-188)||(9781639-9781681)
chr1 (144-194)||(30323710-30323760)
chr1 (146-188)||(34432462-34432504)
chr1 (147-187)||(29861799-29861839)
[»] scaffold0037 (1 HSPs)
scaffold0037 (146-188)||(27860-27902)
[»] scaffold0005 (1 HSPs)
scaffold0005 (146-188)||(44669-44711)
[»] scaffold0640 (1 HSPs)
scaffold0640 (146-188)||(8171-8213)
[»] scaffold0177 (1 HSPs)
scaffold0177 (146-188)||(25609-25651)
[»] scaffold0060 (1 HSPs)
scaffold0060 (145-186)||(30525-30566)
[»] scaffold0285 (1 HSPs)
scaffold0285 (151-187)||(13252-13288)


Alignment Details
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11983529 - 11983384
Alignment:
Q  1 tcttataataaggaccagatatataattttaattctttttgaattattcaagtaacttttattcaaattaaagatttaaatggatatatgtggacacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11983529 tcttataataaggaccagatatataattttaattctttttgaattattcaagtaacttttattcaaattaaagatttaaatggatatatgtggacacaaa 11983430  T
Q  101 aaatatgatatcgagttcgtccattgtataaatatgacattcgccc 146  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  11983429 aaatatgatatcgagtccgtccattgtataaatatgacattcgccc 11983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 30777643 - 30777601
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  30777643 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 30777601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 5612562 - 5612514
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtgc 195  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  5612562 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgc 5612514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 12852115 - 12852158
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  12852115 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 12852158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 32707953 - 32707910
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  32707953 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 32707910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 39690885 - 39690842
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  39690885 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 39690842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 6243279 - 6243233
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  6243279 ctgtgaagctccgatacttcaaaatggatgacgtattgtatcctctg 6243233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 10656817 - 10656859
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  10656817 ctgtgaagccccgatactttaaaatggatgacgtatcgtatcc 10656859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 26716270 - 26716312
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  26716270 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcc 26716312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 26986010 - 26986052
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  26986010 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcc 26986052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 1795390 - 1795431
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  1795390 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcc 1795431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 30918376 - 30918417
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  30918376 tgtgaagccccgatacttcaaaatggatgacgtattgtatcc 30918417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 9792316 - 9792364
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    ||||||||||||||||||| |||||| |||||||| ||||||| |||||    
T  9792316 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgtg 9792364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 1639904 - 1639869
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgta 180  Q
    ||||||||||||||||||||||||||| ||||||||    
T  1639904 cctgtgaagccccgatacttcaaaatggatgacgta 1639869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 32624875 - 32624922
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    ||||||||||||||| ||||||||| |||||||| ||||||| |||||    
T  32624875 tgtgaagccccgatatttcaaaatggatgacgtaccgtatcccctgtg 32624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 33829753 - 33829792
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  33829753 tgaagccccgatacttcaaaatggatgacgtaccgtatcc 33829792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 26795114 - 26795072
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  26795114 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcc 26795072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 26691618 - 26691655
Alignment:
Q  151 aagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcc 26691655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 26961350 - 26961387
Alignment:
Q  151 aagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcc 26961387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 18002068 - 18002029
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcct 189  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  18002068 tgaagcccc-atacttcaaaatggatgacgtatcgtatcct 18002029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 28376988 - 28377034
Alignment:
Q  141 tcgccctgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  28376988 tcgccctgtgaagccccgatacttcaaaatggatgacgtatcgtatc 28377034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 53322335 - 53322377
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcct 189  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  53322335 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcct 53322377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 10257697 - 10257739
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  10257697 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatcc 10257739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 14795020 - 14795062
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  14795020 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 14795062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 47607106 - 47607148
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  47607106 cctgtgaagccccgatacttcaaaatggatgacatatcgtatc 47607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 8064227 - 8064188
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcc 8064188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 40694070 - 40694109
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcc 40694109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 3403694 - 3403648
Alignment:
Q  148 gtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||||| ||||||||||||| |||||||| ||||||| |||||    
T  3403694 gtgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtg 3403648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 5834827 - 5834869
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||| |||||||||||||||| |||||||| |||||||    
T  5834827 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcc 5834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 19738698 - 19738736
Alignment:
Q  150 gaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  19738698 gaagccccgatacttcaaaatggatgacgtaccgtatcc 19738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 41145609 - 41145643
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgta 180  Q
    |||||||||||||||||||||||||| ||||||||    
T  41145609 ctgtgaagccccgatacttcaaaatggatgacgta 41145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 46432053 - 46432008
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||    
T  46432053 ctgtgaagccc-gatacttcaaaacggatgacgtatcgtatcctctg 46432008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 52122990 - 52122956
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgta 180  Q
    |||||||||||||||||||||||||| ||||||||    
T  52122990 ctgtgaagccccgatacttcaaaatggatgacgta 52122956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 51674856 - 51674896
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||| |||||||||||||||  |||||||||||||||    
T  51674856 tgtgaagcgccgatacttcaaaatagatgacgtatcgtatc 51674896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 51858834 - 51858870
Alignment:
Q  151 aagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||||||||| |||||| |||||||||||||||    
T  51858834 aagccccgatactttaaaatggatgacgtatcgtatc 51858870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 32877433 - 32877476
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  32877433 cctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 32877476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 34901504 - 34901461
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  34901504 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 34901461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 36483431 - 36483474
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  36483431 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 36483474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 6028484 - 6028526
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  6028484 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 6028526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 13422205 - 13422247
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  13422205 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 13422247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 16384614 - 16384656
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  16384614 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 16384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 22201458 - 22201416
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||| ||||||||||||||||| ||||||||||||||||    
T  22201458 ctgtgaagtcccgatacttcaaaatggatgacgtatcgtatcc 22201416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 2873030 - 2872989
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  2873030 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 2872989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 37372256 - 37372297
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  37372256 ctgtgaagctccgatacttcaaaatggatgacgtatcgtatc 37372297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 28876688 - 28876653
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgta 180  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28876688 cctgtgaagccccgatacttcaaaatggatgacgta 28876653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 43771826 - 43771783
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||| |||||||||||||||||| |||||||| |||||||    
T  43771826 cctgtgaaaccccgatacttcaaaatggatgacgtaccgtatcc 43771783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 32759370 - 32759412
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||| ||||||||||||||| |||||||| |||||||    
T  32759370 ctgtgaagcctcgatacttcaaaatggatgacgtaccgtatcc 32759412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 32677 - 32726
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    ||||| |||||||||||||| ||||||  ||||||||| |||||||||||    
T  32677 cctgtaaagccccgatactttaaaatggttgacgtatcatatcctctgtg 32726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 5818424 - 5818391
Alignment:
Q  154 ccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||||||||||||| |||||||||||||||    
T  5818424 ccccgatacttcaaaatggatgacgtatcgtatc 5818391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 7411636 - 7411681
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||| |||||||||||||||| ||| |||||||||||| |||||    
T  7411636 tgaagctccgatacttcaaaatggatggcgtatcgtatccactgtg 7411681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 12357889 - 12357933
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgta-cgtatcctctgtg 12357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 12359017 - 12359061
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgta-cgtatcctctgtg 12359061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 19436272 - 19436313
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||| |||||||||||||||| |||||||| |||||||    
T  19436272 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcc 19436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 19572421 - 19572462
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||| |||||||||||||||| |||||||| |||||||    
T  19572421 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcc 19572462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 40412433 - 40412474
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  40412433 tgtgaagccccaatacttcaaaatggatgatgtatcgtatcc 40412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 37668579 - 37668619
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    ||||||| |||||||||||||||||| |||||||| |||||    
T  37668579 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtat 37668619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 41099406 - 41099366
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    ||||||||||||||||||||||||| |||| |||| |||||    
T  41099406 tgtgaagccccgatacttcaaaatggatgatgtattgtatc 41099366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 25969390 - 25969433
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25969390 cctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 25969433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 1043189 - 1043150
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  1043189 tgaagccccgatacttcaaaatggatgacgtatcgtatcc 1043150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 19510518 - 19510565
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||    
T  19510518 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtg 19510565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 38262992 - 38263039
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    ||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  38262992 cctgtgaagccccgatacttcaaaatggatgacgtaccgtattctctg 38263039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 47238729 - 47238686
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  47238729 cctgtgaagccccgatacttcaaaatggatgatgtatcgtatcc 47238686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 34238152 - 34238194
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  34238152 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 34238194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 39520794 - 39520836
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  39520794 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 39520836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 40095644 - 40095686
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  40095644 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 40095686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 11829684 - 11829725
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  11829684 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 11829725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 33454065 - 33454106
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  33454065 tgtgaagccccgatatttcaaaatggatgacgtatcgtatcc 33454106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 42896997 - 42897038
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  42896997 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 42897038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 44960255 - 44960214
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  44960255 tgtgaagctccgatacttcaaaatggatgacgtatcgtatcc 44960214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 26773835 - 26773791
Alignment:
Q  144 ccctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||    
T  26773835 ccctgtgaagccccgatactttaaaattgatgacgtatcgtatcc 26773791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 27353915 - 27353955
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  27353915 ctgtgaagccccgatacttcaaaatggatgacgtaccgtat 27353955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 36758114 - 36758075
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  36758114 tgaagccccaatacttcaaaatgaatgatgtatcgtatcc 36758075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 36767638 - 36767599
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  36767638 tgaagccccaatacttcaaaatgaatgatgtatcgtatcc 36767599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 48163401 - 48163444
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||||  ||||||| |||||||    
T  48163401 cctgtgaagccccgatacttcaaaatgggtgacgtaccgtatcc 48163444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 555002 - 554953
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||||||||||||||  |||||  |||||||||||||||| |||||    
T  555002 cctgtgaagccccgatactctaaaatagatgacgtatcgtatcccctgtg 554953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 16850779 - 16850820
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    ||||||||||||||||| ||||||||| |||||||| |||||    
T  16850779 cctgtgaagccccgatatttcaaaatggatgacgtaccgtat 16850820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 21179849 - 21179894
Alignment:
Q  144 ccctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcct 189  Q
    |||| |||||| |||||||||||||||| |||| ||||||||||||    
T  21179849 ccctttgaagctccgatacttcaaaatggatgatgtatcgtatcct 21179894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 27555489 - 27555444
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    |||||||||| |||||||||||||| |||||||| ||||| |||||    
T  27555489 tgtgaagccctgatacttcaaaatggatgacgtaccgtattctctg 27555444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 8028713 - 8028745
Alignment:
Q  157 cgatacttcaaaatgaatgacgtatcgtatcct 189  Q
    ||||||||||||||| |||||||||||||||||    
T  8028713 cgatacttcaaaatggatgacgtatcgtatcct 8028745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 24956243 - 24956287
Alignment:
Q  145 cctgtgaagcccc-gatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  24956243 cctgtgaagccccagatacttcaaaattgatgacgtatcgtatcc 24956287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 27083982 - 27084024
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  27083982 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 27084024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 26327152 - 26327193
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  26327152 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatc 26327193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 3212474 - 3212514
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  3212474 ctgtgaagccccgatacttcaaaatggatgacgtatcgtat 3212514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 1036947 - 1036905
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  1036947 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 1036905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 32130779 - 32130738
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  32130779 tgtgaagccccgatactttaaaatgaatgacgtaccgtatcc 32130738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 13607903 - 13607860
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||    
T  13607903 tgaatccctgatacttcaaaatggatgacgtatcgtatcctctg 13607860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 234306 - 234344
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  234306 tgaagccccgatacttcaaaatggttgacgtatcgtatc 234344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 10894693 - 10894651
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||| |||||||||||||| |||||||| |||||||    
T  10894693 ctgtgaagccctgatacttcaaaatggatgacgtaccgtatcc 10894651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 25834616 - 25834575
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  25834616 tgtgaaaccccgatacttcaaattggatgacgtatcgtatcc 25834575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 31741267 - 31741235
Alignment:
Q  156 ccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||| ||||||||||||||||    
T  31741267 ccgatacttcaaaatggatgacgtatcgtatcc 31741235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 52121177 - 52121219
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  52121177 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 52121219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 55269133 - 55269091
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  55269133 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 55269091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 38889200 - 38889155
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctct 191  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  38889200 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcctct 38889155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 41742194 - 41742145
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  41742194 cctgtgaagcgccgatacttcaaaatggatgacgtattgtatcctctgtg 41742145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 19420904 - 19420944
Alignment:
Q  148 gtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  19420904 gtgaagccccgatacttcaaaatggatgacgtatcgtatcc 19420944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 21006605 - 21006565
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  21006605 tgtgaagccccgatacttcaaaatgaatgacgtatcatatc 21006565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 21157849 - 21157801
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtgc 195  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  21157849 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgc 21157801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 13748565 - 13748522
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctg 13748522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 7327709 - 7327751
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  7327709 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 7327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 22611495 - 22611453
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  22611495 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 22611453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 30787683 - 30787641
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  30787683 ctgtgaagccccgatacttcaaaatcgatgacgtatcgtatcc 30787641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 40497327 - 40497369
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  40497327 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 40497369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 2122702 - 2122743
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  2122702 tgtgaagccccgatacttcaaaatggatgacgtattgtatcc 2122743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 35389748 - 35389789
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  35389748 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 35389789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 42465027 - 42464982
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||    
T  42465027 tgtgaagccccgatacttcaaaatggatgacgtactgtatcctctg 42464982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 33238719 - 33238759
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgta 185  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  33238719 cctgtgaagccccgatacttcaaaatggatgacgtaccgta 33238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 1679820 - 1679777
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| || ||||| |||||||    
T  1679820 cctgtgaagccccgatacttcaaaatggataacgtaccgtatcc 1679777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 6134500 - 6134461
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcc 6134461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 22289839 - 22289800
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  22289839 tgaagcctcgatacttcaaaatggatgacgtatcgtatcc 22289800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 22310703 - 22310750
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||||||||||||||| |||| |||||||| ||||||| |||||    
T  22310703 tgtgaagccccgatacttcacaatggatgacgtaccgtatcccctgtg 22310750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 48122825 - 48122864
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  48122825 tgaagccccgatacttcaaaatggatgacgtaccgtatcc 48122864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 10225272 - 10225230
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  10225272 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcc 10225230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 28704724 - 28704766
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||| |||||| |||||||| |||||||    
T  28704724 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcc 28704766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 37996932 - 37996890
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||| |||||| |||||||| |||||||    
T  37996932 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcc 37996890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 29915859 - 29915900
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||| ||||||||||||||||  ||||||||||||||||    
T  29915859 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcc 29915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 29965012 - 29965053
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||| ||||||||||||||||  ||||||||||||||||    
T  29965012 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcc 29965053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 53192498 - 53192535
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  53192498 tgaagccccgatacttcaaaatggatgacgtaccgtat 53192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 2567508 - 2567468
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    |||||||  ||||||||||||||||| ||||||||||||||    
T  2567508 ctgtgaaatcccgatacttcaaaatggatgacgtatcgtat 2567468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 28882797 - 28882757
Alignment:
Q  148 gtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||| |||||||||||||||| |||||||| |||||||    
T  28882797 gtgaagctccgatacttcaaaatggatgacgtaccgtatcc 28882757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 7807495 - 7807453
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  7807495 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 7807453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 20536772 - 20536814
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  20536772 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 20536814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 5588104 - 5588149
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctct 191  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  5588104 ctgtgaagctccgatacttcaaaatggatgacgtatcgtatcctct 5588149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 45159418 - 45159377
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  45159418 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcc 45159377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 18300969 - 18301017
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||||    
T  18300969 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtg 18301017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 1776558 - 1776515
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  1776558 cctgtgaagccccgatacttcaaaatggttgacgtatcgtatcc 1776515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 16561796 - 16561839
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  16561796 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 16561839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 28746774 - 28746731
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  28746774 cctgtgaagccccgatacttcaaaatggttgacgtatcgtatcc 28746731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 6124168 - 6124218
Alignment:
Q  144 ccctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||| |||||    
T  6124168 ccctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgtg 6124218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 7876711 - 7876753
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  7876711 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 7876753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 8483029 - 8482995
Alignment:
Q  155 cccgatacttcaaaatgaatgacgtatcgtatcct 189  Q
    |||||||||||||||||||||||||||||||||||    
T  8483029 cccgatacttcaaaatgaatgacgtatcgtatcct 8482995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 38602443 - 38602401
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  38602443 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 38602401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 2319274 - 2319314
Alignment:
Q  148 gtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  2319274 gtgaaaccccgatacttcaaaatggatgacgtatcgtatcc 2319314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 3563851 - 3563890
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  3563851 tgaagccccgatacttcaaaatggatgacgtattgtatcc 3563890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 4170624 - 4170581
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||| |||||||||||||||| |||||||| |||||||    
T  4170624 cctgtgaagctccgatacttcaaaatggatgacgtaccgtatcc 4170581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 21104482 - 21104525
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||    
T  21104482 tgaagccccaatactttaaaatggatgacgtatcgtatcctctg 21104525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 24585530 - 24585569
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  24585530 tgaagccccgatacttcaaaatggatgatgtatcgtatcc 24585569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 4355320 - 4355362
Alignment:
Q  144 ccctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||    
T  4355320 ccctctgaagcctcgatacttcaaaatggatgacgtatcgtat 4355362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 33324815 - 33324857
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||| ||| |||||||    
T  33324815 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcc 33324857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 40309018 - 40308976
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  40309018 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatcc 40308976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 6497769 - 6497728
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  6497769 tgtgaagtcccgatacttcaaaatggatgacgtaccgtatcc 6497728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 12819297 - 12819346
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||||||| |||||||||||||| |||| ||| ||||||| |||||    
T  12819297 cctgtgaagccctgatacttcaaaatggatgatgtaccgtatcccctgtg 12819346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 1005512 - 1005552
Alignment:
Q  148 gtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||| | |||||||||||||| ||||||||||||||||    
T  1005512 gtgaagctctgatacttcaaaatggatgacgtatcgtatcc 1005552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 4561785 - 4561825
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  4561785 ctgtgaagctccaatacttcaaaatggatgacgtatcgtat 4561825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 14824146 - 14824186
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  14824146 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatc 14824186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 3708399 - 3708354
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctg 192  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||    
T  3708399 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcctctg 3708354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 28949363 - 28949320
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  28949363 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 28949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 37104120 - 37104159
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  37104120 tgaagccccgatacttcaaaatggatgacgtatcgtatcc 37104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 38330423 - 38330466
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  38330423 cctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 38330466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 6916995 - 6916953
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  6916995 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 6916953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 34096673 - 34096631
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  34096673 ctgtgaagccccgatatttcaaaatgattgacgtatcgtatcc 34096631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 37346969 - 37346927
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  37346969 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 37346927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 52895834 - 52895792
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  52895834 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 52895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 3426842 - 3426887
Alignment:
Q  143 gccctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||    
T  3426842 gccctgtgaagccccgatactttaaaatggatgacgtattgtatcc 3426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 13013113 - 13013065
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||||||||| ||||||||||||| ||||| |||||||||| |||||    
T  13013113 ctgtgaagccccaatacttcaaaatggatgacatatcgtatcccctgtg 13013065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 20409672 - 20409633
Alignment:
Q  149 tgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  20409672 tgaagccccgatacttcaaaatggatgacgtaccgtatcc 20409633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 1043224 - 1043266
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||| ||| |||||||    
T  1043224 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcc 1043266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 2472975 - 2472933
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||| |||||||||||||||  ||||||||||||||||    
T  2472975 ctgtgaagctccgatacttcaaaatagatgacgtatcgtatcc 2472933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 9781639 - 9781681
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||||| ||||||||||||||  |||||||||||||||    
T  9781639 ctgtgaagccctgatacttcaaaatggttgacgtatcgtatcc 9781681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 30323710 - 30323760
Alignment:
Q  144 ccctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcctctgtg 194  Q
    |||||| ||||||||||||||||||||| |||||| | ||||| |||||||    
T  30323710 ccctgtaaagccccgatacttcaaaatggatgacgcaacgtattctctgtg 30323760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 34432504 - 34432462
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  34432504 ctgtgaagctccgatacttcaaaatggatgacgtattgtatcc 34432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 29861799 - 29861839
Alignment:
Q  147 tgtgaagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||||||||||||||||||||||||  |||||||| |||||    
T  29861799 tgtgaagccccgatacttcaaaatggttgacgtattgtatc 29861839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 27902 - 27860
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  27902 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 27860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 44711 - 44669
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  44711 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcc 44669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 8213 - 8171
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||| ||| |||||||    
T  8213 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcc 8171  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 25651 - 25609
Alignment:
Q  146 ctgtgaagccccgatacttcaaaatgaatgacgtatcgtatcc 188  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  25651 ctgtgaagccccgatacttcaaaatggatgacgcaccgtatcc 25609  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 30566 - 30525
Alignment:
Q  145 cctgtgaagccccgatacttcaaaatgaatgacgtatcgtat 186  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  30566 cctgtgaagccccgatacttcaaaatggataacgtaccgtat 30525  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 13252 - 13288
Alignment:
Q  151 aagccccgatacttcaaaatgaatgacgtatcgtatc 187  Q
    |||| |||||||||||||||| |||||||||||||||    
T  13252 aagctccgatacttcaaaatggatgacgtatcgtatc 13288  T

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