View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3516_low_9 (Length: 380)

Name: NF3516_low_9
Description: NF3516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3516_low_9
NF3516_low_9
[»] chr8 (37 HSPs)
chr8 (220-374)||(31449216-31449370)
chr8 (220-374)||(4237692-4237846)
chr8 (220-374)||(4242431-4242585)
chr8 (220-374)||(8330714-8330868)
chr8 (220-374)||(37772296-37772449)
chr8 (220-374)||(43302035-43302189)
chr8 (220-374)||(25367337-25367491)
chr8 (224-374)||(34818061-34818211)
chr8 (248-374)||(4582675-4582801)
chr8 (261-374)||(21384333-21384446)
chr8 (261-374)||(21387753-21387866)
chr8 (220-374)||(23915081-23915235)
chr8 (265-374)||(18861966-18862075)
chr8 (261-369)||(21411617-21411725)
chr8 (261-369)||(21806109-21806217)
chr8 (248-374)||(19393110-19393236)
chr8 (265-374)||(21827335-21827444)
chr8 (80-141)||(25367156-25367217)
chr8 (261-363)||(16066609-16066711)
chr8 (248-366)||(22104272-22104390)
chr8 (80-139)||(8330534-8330593)
chr8 (80-153)||(4237489-4237561)
chr8 (80-153)||(4242228-4242300)
chr8 (80-153)||(34817891-34817970)
chr8 (110-153)||(8330586-8330629)
chr8 (220-303)||(17153198-17153281)
chr8 (80-139)||(37772592-37772651)
chr8 (80-139)||(42972989-42973047)
chr8 (90-151)||(43301888-43301948)
chr8 (297-356)||(25733593-25733652)
chr8 (220-280)||(10933923-10933983)
chr8 (220-303)||(17157403-17157486)
chr8 (110-153)||(25367208-25367251)
chr8 (261-331)||(14036087-14036157)
chr8 (82-139)||(14036328-14036384)
chr8 (85-138)||(31449018-31449070)
chr8 (91-139)||(4582440-4582487)
[»] chr5 (43 HSPs)
chr5 (220-374)||(36936862-36937016)
chr5 (220-374)||(36941616-36941770)
chr5 (224-374)||(13300845-13300995)
chr5 (220-374)||(31732126-31732280)
chr5 (220-374)||(41997253-41997407)
chr5 (220-374)||(42002022-42002176)
chr5 (220-374)||(557285-557438)
chr5 (220-374)||(562057-562210)
chr5 (220-374)||(32460895-32461049)
chr5 (220-375)||(23976938-23977094)
chr5 (221-374)||(21323328-21323481)
chr5 (221-374)||(3666504-3666655)
chr5 (220-374)||(36949374-36949528)
chr5 (224-374)||(12044485-12044640)
chr5 (221-367)||(8770839-8770986)
chr5 (261-374)||(10754039-10754152)
chr5 (248-374)||(21826812-21826938)
chr5 (248-374)||(26869693-26869819)
chr5 (220-374)||(24435534-24435688)
chr5 (80-139)||(13300638-13300697)
chr5 (80-139)||(21323189-21323248)
chr5 (80-139)||(31732428-31732487)
chr5 (84-153)||(12044284-12044352)
chr5 (80-153)||(36936659-36936731)
chr5 (80-153)||(36941413-36941485)
chr5 (110-149)||(21323241-21323280)
chr5 (84-153)||(557569-557637)
chr5 (84-153)||(562341-562409)
chr5 (84-153)||(3666747-3666815)
chr5 (80-153)||(8771137-8771209)
chr5 (325-374)||(26667892-26667941)
chr5 (325-374)||(26939489-26939538)
chr5 (325-374)||(29167405-29167454)
chr5 (325-374)||(36424252-36424301)
chr5 (220-312)||(15395188-15395283)
chr5 (80-139)||(15395003-15395061)
chr5 (80-153)||(32460697-32460769)
chr5 (80-153)||(42002307-42002379)
chr5 (80-139)||(27425243-27425301)
chr5 (327-369)||(36430230-36430272)
chr5 (333-374)||(7452367-7452408)
chr5 (80-153)||(23976714-23976786)
chr5 (91-139)||(41099560-41099607)
[»] chr3 (62 HSPs)
chr3 (220-374)||(3034232-3034386)
chr3 (220-374)||(3693207-3693361)
chr3 (220-374)||(8888519-8888673)
chr3 (220-374)||(10585541-10585695)
chr3 (220-374)||(3673175-3673329)
chr3 (220-374)||(8070268-8070422)
chr3 (220-374)||(8883759-8883913)
chr3 (220-375)||(6595744-6595899)
chr3 (220-374)||(45903896-45904050)
chr3 (261-374)||(9706983-9707096)
chr3 (261-374)||(16749312-16749425)
chr3 (261-374)||(19776474-19776587)
chr3 (248-374)||(18350154-18350280)
chr3 (220-351)||(22758531-22758662)
chr3 (248-374)||(8223524-8223650)
chr3 (80-139)||(10585339-10585398)
chr3 (265-374)||(4106722-4106831)
chr3 (265-374)||(4110574-4110683)
chr3 (261-374)||(8488783-8488895)
chr3 (265-374)||(15965644-15965753)
chr3 (265-374)||(15969568-15969677)
chr3 (265-374)||(15973492-15973601)
chr3 (248-367)||(8197048-8197167)
chr3 (248-374)||(29817-29943)
chr3 (248-366)||(14425222-14425340)
chr3 (261-374)||(37438952-37439065)
chr3 (252-348)||(51922949-51923045)
chr3 (220-319)||(12899094-12899193)
chr3 (291-374)||(18699200-18699283)
chr3 (220-310)||(16043154-16043244)
chr3 (221-315)||(53358754-53358848)
chr3 (80-153)||(3034517-3034589)
chr3 (80-153)||(3693493-3693565)
chr3 (80-153)||(8888804-8888876)
chr3 (220-304)||(16023191-16023275)
chr3 (84-139)||(6595581-6595635)
chr3 (220-310)||(16048646-16048737)
chr3 (220-310)||(16055829-16055919)
chr3 (84-153)||(8070553-8070621)
chr3 (325-374)||(18467826-18467875)
chr3 (325-374)||(32473456-32473505)
chr3 (261-334)||(35456332-35456404)
chr3 (325-374)||(39775160-39775209)
chr3 (80-146)||(45903730-45903802)
chr3 (80-139)||(631829-631887)
chr3 (80-138)||(3673454-3673511)
chr3 (308-374)||(14671982-14672048)
chr3 (83-145)||(47541093-47541154)
chr3 (84-153)||(8884044-8884112)
chr3 (325-374)||(14438132-14438181)
chr3 (325-374)||(18472620-18472669)
chr3 (81-152)||(47540705-47540774)
chr3 (220-331)||(429061-429172)
chr3 (80-139)||(8223965-8224023)
chr3 (83-138)||(12898900-12898954)
chr3 (261-335)||(18011968-18012042)
chr3 (220-266)||(47540843-47540889)
chr3 (108-153)||(16023362-16023407)
chr3 (248-313)||(47540898-47540963)
chr3 (91-139)||(8197482-8197529)
chr3 (111-143)||(16056038-16056070)
chr3 (91-139)||(18349792-18349839)
[»] chr1 (45 HSPs)
chr1 (220-374)||(41097309-41097463)
chr1 (220-374)||(3094678-3094832)
chr1 (220-374)||(40232739-40232893)
chr1 (224-369)||(13893910-13894055)
chr1 (220-374)||(17213795-17213949)
chr1 (220-374)||(1067070-1067224)
chr1 (220-309)||(8267203-8267292)
chr1 (261-374)||(39243415-39243528)
chr1 (261-374)||(39246970-39247083)
chr1 (261-374)||(41387367-41387480)
chr1 (220-374)||(19725257-19725409)
chr1 (247-374)||(22428574-22428700)
chr1 (248-374)||(14804093-14804219)
chr1 (276-374)||(33055625-33055723)
chr1 (265-374)||(1924450-1924559)
chr1 (265-374)||(20923464-20923573)
chr1 (224-313)||(27308243-27308332)
chr1 (80-139)||(41097107-41097166)
chr1 (248-362)||(21498252-21498366)
chr1 (248-374)||(26198947-26199073)
chr1 (248-374)||(52100601-52100726)
chr1 (248-348)||(14819587-14819687)
chr1 (283-374)||(16836700-16836791)
chr1 (224-362)||(19726967-19727104)
chr1 (248-374)||(2367632-2367758)
chr1 (80-153)||(3094963-3095035)
chr1 (90-139)||(13894185-13894233)
chr1 (81-153)||(23284988-23285060)
chr1 (280-363)||(26319584-26319667)
chr1 (248-374)||(2384625-2384751)
chr1 (325-374)||(26927153-26927202)
chr1 (80-153)||(40232541-40232613)
chr1 (93-153)||(8267034-8267093)
chr1 (91-151)||(16836443-16836502)
chr1 (324-374)||(51040942-51040992)
chr1 (84-153)||(1067292-1067360)
chr1 (325-374)||(10135939-10135988)
chr1 (80-135)||(19725055-19725109)
chr1 (80-139)||(52100233-52100291)
chr1 (94-139)||(19727252-19727296)
chr1 (110-143)||(26319423-26319456)
chr1 (91-139)||(21498681-21498728)
chr1 (80-152)||(23254368-23254440)
chr1 (99-139)||(26199394-26199433)
chr1 (109-153)||(39036772-39036816)
[»] scaffold0060 (4 HSPs)
scaffold0060 (220-374)||(47324-47478)
scaffold0060 (220-374)||(52268-52422)
scaffold0060 (80-139)||(52066-52125)
scaffold0060 (80-139)||(47122-47181)
[»] scaffold0182 (3 HSPs)
scaffold0182 (220-374)||(9231-9386)
scaffold0182 (80-139)||(9028-9087)
scaffold0182 (109-153)||(9102-9146)
[»] chr7 (43 HSPs)
chr7 (220-374)||(27256826-27256980)
chr7 (220-374)||(9650311-9650466)
chr7 (220-374)||(40864714-40864868)
chr7 (224-369)||(8076644-8076789)
chr7 (224-374)||(47102128-47102268)
chr7 (221-374)||(19640888-19641041)
chr7 (221-334)||(9008786-9008899)
chr7 (220-369)||(14927987-14928136)
chr7 (220-369)||(15351453-15351602)
chr7 (261-374)||(16459773-16459886)
chr7 (261-374)||(20488537-20488650)
chr7 (262-374)||(20485176-20485288)
chr7 (261-374)||(18426516-18426629)
chr7 (248-374)||(19096843-19096970)
chr7 (261-374)||(14259595-14259708)
chr7 (80-141)||(27257101-27257162)
chr7 (261-374)||(45169323-45169436)
chr7 (247-351)||(8954645-8954749)
chr7 (221-369)||(29727152-29727304)
chr7 (248-374)||(838811-838937)
chr7 (248-374)||(1203991-1204117)
chr7 (80-138)||(40864551-40864609)
chr7 (248-363)||(36477577-36477685)
chr7 (248-374)||(845987-846113)
chr7 (248-374)||(853364-853490)
chr7 (248-374)||(1211368-1211494)
chr7 (220-345)||(11017433-11017557)
chr7 (221-303)||(11297413-11297495)
chr7 (261-374)||(32302428-32302541)
chr7 (220-374)||(16580818-16580972)
chr7 (220-309)||(1043873-1043962)
chr7 (261-334)||(10499496-10499569)
chr7 (261-334)||(10504525-10504598)
chr7 (261-334)||(10532225-10532298)
chr7 (80-153)||(11017217-11017289)
chr7 (325-374)||(26341821-26341870)
chr7 (80-153)||(47102403-47102475)
chr7 (222-313)||(11247752-11247841)
chr7 (80-139)||(11247441-11247499)
chr7 (98-153)||(19641173-19641228)
chr7 (110-153)||(27257067-27257110)
chr7 (119-153)||(40864611-40864645)
chr7 (261-334)||(13343821-13343894)
[»] chr2 (37 HSPs)
chr2 (224-374)||(10160075-10160225)
chr2 (220-374)||(28855720-28855873)
chr2 (220-374)||(30658766-30658914)
chr2 (220-374)||(6297244-6297397)
chr2 (220-374)||(22844991-22845145)
chr2 (220-374)||(25375478-25375632)
chr2 (221-374)||(7559702-7559856)
chr2 (220-374)||(23068104-23068258)
chr2 (261-374)||(1284103-1284216)
chr2 (248-374)||(34070008-34070134)
chr2 (265-374)||(30344312-30344421)
chr2 (248-374)||(24292841-24292967)
chr2 (262-374)||(377683-377795)
chr2 (248-374)||(26897215-26897342)
chr2 (248-374)||(6856786-6856912)
chr2 (248-374)||(24286273-24286399)
chr2 (261-374)||(42248816-42248929)
chr2 (220-362)||(9785751-9785891)
chr2 (263-363)||(30635393-30635496)
chr2 (80-139)||(6297063-6297122)
chr2 (110-153)||(6297115-6297158)
chr2 (220-334)||(17452937-17453056)
chr2 (84-153)||(10159868-10159936)
chr2 (325-374)||(18345025-18345074)
chr2 (90-139)||(28856017-28856065)
chr2 (327-374)||(17968397-17968444)
chr2 (220-303)||(30641462-30641545)
chr2 (84-139)||(30659032-30659086)
chr2 (91-153)||(7559490-7559551)
chr2 (261-315)||(17327708-17327762)
chr2 (80-145)||(30629723-30629787)
chr2 (93-153)||(17327904-17327963)
chr2 (81-153)||(30619713-30619784)
chr2 (80-144)||(30640160-30640223)
chr2 (80-139)||(24292598-24292656)
chr2 (80-139)||(35602521-35602578)
chr2 (91-139)||(34070449-34070496)
[»] scaffold0061 (2 HSPs)
scaffold0061 (220-374)||(49335-49489)
scaffold0061 (80-139)||(49112-49171)
[»] scaffold0017 (2 HSPs)
scaffold0017 (220-374)||(149145-149299)
scaffold0017 (80-139)||(149463-149522)
[»] chr4 (36 HSPs)
chr4 (220-366)||(7902462-7902608)
chr4 (220-374)||(34561013-34561167)
chr4 (220-374)||(13521336-13521491)
chr4 (220-369)||(8660754-8660903)
chr4 (220-374)||(3997416-3997567)
chr4 (220-351)||(31297845-31297977)
chr4 (224-374)||(41817371-41817534)
chr4 (224-374)||(47575251-47575400)
chr4 (248-374)||(15225754-15225880)
chr4 (220-374)||(15011167-15011321)
chr4 (261-374)||(12488387-12488500)
chr4 (261-374)||(14868460-14868573)
chr4 (261-374)||(14877361-14877474)
chr4 (80-141)||(34561288-34561349)
chr4 (247-374)||(14898994-14899121)
chr4 (261-374)||(10713529-10713642)
chr4 (261-374)||(10927299-10927412)
chr4 (265-374)||(14953451-14953560)
chr4 (80-139)||(7902260-7902319)
chr4 (248-374)||(9185063-9185189)
chr4 (265-374)||(25690583-25690692)
chr4 (80-139)||(3997214-3997273)
chr4 (248-374)||(9190928-9191054)
chr4 (80-153)||(41817659-41817732)
chr4 (248-315)||(26034836-26034903)
chr4 (80-138)||(31297667-31297724)
chr4 (221-335)||(52742576-52742690)
chr4 (108-153)||(34561254-34561299)
chr4 (266-315)||(39320210-39320259)
chr4 (84-139)||(52742413-52742467)
chr4 (308-374)||(18023210-18023276)
chr4 (325-374)||(5270856-5270905)
chr4 (333-374)||(5927658-5927699)
chr4 (80-153)||(39320435-39320507)
chr4 (80-139)||(3310092-3310150)
chr4 (333-374)||(31728805-31728846)
[»] scaffold0041 (3 HSPs)
scaffold0041 (220-374)||(35055-35209)
scaffold0041 (80-141)||(34873-34934)
scaffold0041 (110-153)||(34925-34968)
[»] chr6 (27 HSPs)
chr6 (220-374)||(6112110-6112264)
chr6 (261-364)||(24588570-24588673)
chr6 (220-374)||(15704262-15704416)
chr6 (261-374)||(31477096-31477209)
chr6 (248-374)||(16625005-16625131)
chr6 (261-374)||(19772404-19772517)
chr6 (261-374)||(27324453-27324564)
chr6 (261-374)||(22806940-22807053)
chr6 (261-369)||(2077406-2077514)
chr6 (261-374)||(16760971-16761085)
chr6 (80-153)||(6111910-6111983)
chr6 (265-374)||(22949821-22949930)
chr6 (265-374)||(22953777-22953886)
chr6 (265-374)||(23872265-23872374)
chr6 (265-374)||(23876221-23876330)
chr6 (248-374)||(14073724-14073850)
chr6 (261-374)||(18387521-18387634)
chr6 (261-374)||(26981184-26981297)
chr6 (221-331)||(2862824-2862934)
chr6 (248-374)||(27073574-27073700)
chr6 (325-374)||(17963991-17964040)
chr6 (262-313)||(2759769-2759820)
chr6 (80-139)||(2862685-2862743)
chr6 (220-279)||(28964174-28964233)
chr6 (261-334)||(15991087-15991160)
chr6 (80-139)||(15641171-15641229)
chr6 (90-139)||(2881998-2882046)
[»] scaffold0070 (6 HSPs)
scaffold0070 (220-374)||(59015-59169)
scaffold0070 (220-307)||(63284-63371)
scaffold0070 (80-139)||(59291-59350)
scaffold0070 (80-139)||(63493-63552)
scaffold0070 (110-153)||(59255-59298)
scaffold0070 (110-153)||(63457-63500)
[»] scaffold0020 (3 HSPs)
scaffold0020 (220-374)||(591-745)
scaffold0020 (81-139)||(411-469)
scaffold0020 (110-153)||(462-505)
[»] scaffold0452 (1 HSPs)
scaffold0452 (261-374)||(12360-12473)
[»] scaffold0575 (1 HSPs)
scaffold0575 (220-374)||(5232-5386)
[»] scaffold0011 (1 HSPs)
scaffold0011 (261-374)||(126992-127105)
[»] scaffold0009 (1 HSPs)
scaffold0009 (261-356)||(71738-71834)
[»] scaffold0018 (1 HSPs)
scaffold0018 (220-374)||(21896-22050)
[»] scaffold0572 (1 HSPs)
scaffold0572 (261-374)||(10368-10481)
[»] scaffold0431 (1 HSPs)
scaffold0431 (261-374)||(14869-14982)
[»] scaffold0205 (1 HSPs)
scaffold0205 (261-374)||(30856-30969)
[»] scaffold0628 (2 HSPs)
scaffold0628 (220-374)||(6977-7131)
scaffold0628 (90-139)||(7309-7357)
[»] scaffold0132 (1 HSPs)
scaffold0132 (248-374)||(24675-24801)
[»] scaffold0034 (1 HSPs)
scaffold0034 (220-374)||(121155-121309)
[»] scaffold0019 (1 HSPs)
scaffold0019 (248-374)||(30273-30399)
[»] scaffold0015 (3 HSPs)
scaffold0015 (248-374)||(193646-193772)
scaffold0015 (261-374)||(187973-188086)
scaffold0015 (91-139)||(192764-192811)
[»] scaffold1910 (1 HSPs)
scaffold1910 (261-374)||(455-568)
[»] scaffold0229 (1 HSPs)
scaffold0229 (261-374)||(10818-10931)
[»] scaffold0157 (1 HSPs)
scaffold0157 (261-374)||(31977-32090)
[»] scaffold0144 (1 HSPs)
scaffold0144 (261-362)||(7478-7579)
[»] scaffold0141 (1 HSPs)
scaffold0141 (261-374)||(13404-13517)
[»] scaffold0124 (1 HSPs)
scaffold0124 (261-374)||(21378-21491)
[»] scaffold0031 (1 HSPs)
scaffold0031 (261-374)||(35403-35516)
[»] scaffold0357 (1 HSPs)
scaffold0357 (262-374)||(3740-3852)
[»] scaffold0327 (2 HSPs)
scaffold0327 (262-374)||(19615-19727)
scaffold0327 (99-150)||(8754-8804)
[»] scaffold0415 (1 HSPs)
scaffold0415 (265-374)||(1077-1186)
[»] scaffold0044 (4 HSPs)
scaffold0044 (261-374)||(81147-81260)
scaffold0044 (261-374)||(64749-64862)
scaffold0044 (91-139)||(65320-65367)
scaffold0044 (91-139)||(81568-81615)
[»] scaffold0292 (1 HSPs)
scaffold0292 (220-374)||(7756-7910)
[»] scaffold0478 (2 HSPs)
scaffold0478 (220-331)||(8219-8330)
scaffold0478 (221-281)||(2891-2951)
[»] scaffold0004 (1 HSPs)
scaffold0004 (265-374)||(199781-199888)
[»] scaffold0211 (1 HSPs)
scaffold0211 (84-153)||(22956-23024)
[»] scaffold0008 (1 HSPs)
scaffold0008 (261-334)||(256441-256514)
[»] scaffold0720 (1 HSPs)
scaffold0720 (220-303)||(5902-5985)
[»] scaffold0155 (1 HSPs)
scaffold0155 (301-374)||(22264-22337)
[»] scaffold0096 (1 HSPs)
scaffold0096 (300-347)||(22325-22372)
[»] scaffold0131 (1 HSPs)
scaffold0131 (81-139)||(8454-8511)
[»] scaffold0232 (1 HSPs)
scaffold0232 (325-374)||(11783-11832)
[»] scaffold0045 (1 HSPs)
scaffold0045 (109-153)||(83752-83796)


Alignment Details
Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 31449216 - 31449370
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31449216 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 31449315  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31449316 attccacacaccgaaattcacagttgatgctttctgtgtttttcctctcttctcc 31449370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 4237692 - 4237846
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  4237692 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 4237791  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     |||||| |||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  4237792 attccacgcaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 4237846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 4242431 - 4242585
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  4242431 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 4242530  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     |||||| |||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  4242531 attccacgcaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 4242585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 8330714 - 8330868
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  8330714 gatatttttgtactatatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 8330813  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||| ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  8330814 tttccatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 8330868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 37772449 - 37772296
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||  | |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37772449 gatatttttgtactagatctaatatgagaaa-acttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 37772351  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| || ||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  37772350 tttacatacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 37772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 43302035 - 43302189
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  43302035 gatatttttgtactaaatctaatatgagaattacttgctcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgc 43302134  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||| | ||||||||||||||||||| || |||||||||||||| ||||    
T  43302135 attccacacatcgaaattcacagttgatgcttcctatgtttttcctctcttctcc 43302189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 25367337 - 25367491
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| ||| || |||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||    
T  25367337 gatatttttgtactagatctaatatgagaattacttgatcccaaagtttctcacttactagttgtgaactttctctataaatagagagttcacacagtgc 25367436  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||| ||||| ||||||||| |||||||||  |||||||||||||||| ||||    
T  25367437 tttccatacaccgaaattcacaattgatgcttcatgtgtttttcctctcttctcc 25367491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 224 - 374
Target Start/End: Original strand, 34818061 - 34818211
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    ||||||||||||||||||||||| ||||| ||||||  ||||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  34818061 tttttgtactagatctaatatgagaattacttgctccgaaagtttctcagttattagttgtgaactttctctataaatagagagttcacacagtgctttc 34818160  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
       ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  34818161 ggtacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 34818211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 4582675 - 4582801
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| ||| ||||||| |||| ||||||||||    
T  4582675 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgat 4582774  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||||||||| ||||| ||||    
T  4582775 gcttcctgtgtttttcttctctcctcc 4582801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 21384446 - 21384333
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||  ||||||| ||||||||||||||||||| ||||| ||    
T  21384446 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgctt 21384347  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  21384346 ttcttctcttctcc 21384333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 21387866 - 21387753
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||  ||||||| ||||||||||||||||||| ||||| ||    
T  21387866 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgctt 21387767  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  21387766 ttcttctcttctcc 21387753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 23915235 - 23915081
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||||||| |  |||||||||||| |||||||| || |||| || || |||||||||| ||| ||||||||    
T  23915235 gatatttaagtactagatctaataggtgcattatttgtttccaaagtttctcatttattagttgtaaactatccctataaatagagaactctcacagtgc 23915136  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  23915135 attctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 23915081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 18861966 - 18862075
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 18862065  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  18862066 tctcttctcc 18862075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 261 - 369
Target Start/End: Complemental strand, 21411725 - 21411617
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| ||| || ||||| ||| ||||||| |||||||||||||||||||  |||| ||    
T  21411725 caaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatgcttcatgtgctt 21411626  T
Q  361 ttcctctct 369  Q
    ||| |||||    
T  21411625 ttcttctct 21411617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 261 - 369
Target Start/End: Complemental strand, 21806217 - 21806109
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| ||| || ||||| ||| ||||||| |||||||||||||||||||  |||| ||    
T  21806217 caaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatgcttcatgtgctt 21806118  T
Q  361 ttcctctct 369  Q
    ||| |||||    
T  21806117 ttcttctct 21806109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 19393110 - 19393236
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||||||||||| ||||| ||||||| |||||||||| |||||||| ||| ||    || || |||||||||||||||    
T  19393110 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttgat 19393209  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||| ||||| ||||    
T  19393210 gcttcctgtgcttttcttctcttctcc 19393236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 21827335 - 21827444
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || ||   ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 21827434  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  21827435 tctcttctcc 21827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 25367156 - 25367217
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttag 141  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  25367156 gtgttttcttagtccccaagttttgctgaaaatattttggaacgcaatctagaatattttag 25367217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 16066609 - 16066711
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| |||  |    ||||| ||||||||||||||||||| |||| |||    
T  16066609 caaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatgcttcctgtattt 16066708  T
Q  361 ttc 363  Q
    |||    
T  16066709 ttc 16066711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 22104390 - 22104272
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||  ||||| ||||||| ||||||||||||||||||| ||| |||   ||||| ||||||||| |||||    
T  22104390 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttgat 22104291  T
Q  348 gctttctgtgtttttcctc 366  Q
    | || ||||| ||||||||    
T  22104290 gattcctgtgcttttcctc 22104272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 8330534 - 8330593
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  8330534 gtgttttcttagtccccaagttttgataaaaatattttggaacgcaatcaagaatatttt 8330593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 4237489 - 4237561
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  4237489 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 4237561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 4242228 - 4242300
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  4242228 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 4242300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 34817891 - 34817970
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaa------tattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| |||| |||||||||||||| ||      ||||||||||||||||||||||||||||||||||| ||||||    
T  34817891 gtgttttcttagtctccaagttttgctaagaaaaaatatattttggaacgcaatctaaaatattttagtacatgatctga 34817970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 8330586 - 8330629
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  8330586 aatattttggaacgcaatctaaaatattttagtacatgatctga 8330629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 17153281 - 17153198
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatag 303  Q
    ||||||||||||||| ||||||||||  ||||| ||| || ||||||||||||| ||||||| ||||  ||||||| |||||||    
T  17153281 gatatttttgtactaaatctaatatgtgaattacttgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 37772651 - 37772592
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  37772651 gtgttttcctagtccccaagttctgctaaaaatattttggaacgcaatttagaatatttt 37772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 42973047 - 42972989
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  42973047 gtgttttttgagtccccaagttttggtaaaa-tattttggaacgcaatctaaaatatttt 42972989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 43301888 - 43301948
Alignment:
Q  90 agtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatct 151  Q
    ||||||||||||||||||||| || ||||||| ||||||||| |||||||||||||| ||||    
T  43301888 agtccccaagttttgctaaaa-taatttggaaggcaatctaatatattttagtacatgatct 43301948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 25733593 - 25733652
Alignment:
Q  297 taaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgt 356  Q
    |||||||||| |||||| ||||| ||| ||||||| ||||||||||||||||||| ||||    
T  25733593 taaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcctgt 25733652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 10933983 - 10933923
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattag 280  Q
    ||||||||||||||||||||||||||  ||||| ||| |  ||||||||||||| ||||||    
T  10933983 gatatttttgtactagatctaatatgtgaattacttgttaccaaagtttctcacatattag 10933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 17157403 - 17157486
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatag 303  Q
    |||||||||| |||||||||||| ||  |||||  || || ||||||||||||| ||||||| ||||  ||||||| |||||||    
T  17157403 gatatttttgaactagatctaatttgtgaattacgtgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 25367208 - 25367251
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||    
T  25367208 aatattttagaacgcaatctaaattattttagtacatgatctga 25367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 14036157 - 14036087
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacacc 331  Q
    ||||||||||||| ||||| | ||||| ||| ||| ||||||||||||||||| | | | |||||||||||    
T  14036157 caaagtttctcacatattaatcgtgaattttttctataaatagagagctcacaaaattcattccacacacc 14036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 14036384 - 14036328
Alignment:
Q  82 gttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||| ||||  ||||||||| ||||| |||||||||||||||||| |||||||||    
T  14036384 gttttcttagtcatcaagttttgttaaaa-tattttggaacgcaatctgaaatatttt 14036328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 31449018 - 31449070
Alignment:
Q  85 ttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattt 138  Q
    |||| |||||||||||||| |||||| || |||||||||||||||| |||||||    
T  31449018 ttcttagtccccaagttttactaaaa-taatttggaacgcaatctagaatattt 31449070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 4582440 - 4582487
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||| ||| |||||||||| |||||||| ||||||||    
T  4582440 gtccccaagttttgct-aaattattttggaatgcaatctagaatatttt 4582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 1e-60; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 36936862 - 36937016
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36936862 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 36936961  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  36936962 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 36937016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 36941616 - 36941770
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36941616 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 36941715  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  36941716 attccatacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 36941770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 224 - 374
Target Start/End: Original strand, 13300845 - 13300995
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  13300845 tttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttc 13300944  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||| |||||||||||||||||||  |||| ||||||||||| ||||    
T  13300945 cacacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 13300995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 31732280 - 31732126
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31732280 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 31732181  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| || ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  31732180 tttacatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 31732126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 41997407 - 41997253
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  41997407 gatatttttgtattagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 41997308  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||    
T  41997307 attccacacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 41997253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 42002176 - 42002022
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  42002176 gatatttttgtattagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 42002077  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||    
T  42002076 attccacacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 42002022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 557438 - 557285
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||| | | |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  557438 gatatttttgtactagatctaatatgagaatcact-gctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 557340  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  557339 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 562210 - 562057
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||| | | |||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  562210 gatatttttgtactagatctaatatgagaatcact-gctcccaaagtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgc 562112  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  562111 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 32460895 - 32461049
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||    
T  32460895 gatatttttgtactagatctaatatgagaattacttgctcctaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgc 32460994  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  32460995 attccatacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 32461049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 23976938 - 23977094
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23976938 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgc 23977037  T
Q  320 tttccacacaccaaaattcacagttgatgctt-tctgtgtttttcctctctgctcct 375  Q
     ||||| ||||  ||||||||||||||||||| ||  |||||||| ||||| |||||    
T  23977038 attccatacactgaaattcacagttgatgcttctcgttgtttttcttctcttctcct 23977094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 221 - 374
Target Start/End: Original strand, 21323328 - 21323481
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgct 320  Q
    ||||||||||||||||| |||||||| ||||| |||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |    
T  21323328 atatttttgtactagatataatatgagaattacttgcttccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgtt 21323427  T
Q  321 ttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||| ||||| ||||||||||||||||||| ||||  ||||||||||| ||||    
T  21323428 ttccatacaccgaaattcacagttgatgcttcctgtacttttcctctcttctcc 21323481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 221 - 374
Target Start/End: Complemental strand, 3666655 - 3666504
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgct 320  Q
    |||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| ||| ||     
T  3666655 atatttttgtactagatctaatatgtgaattacttgttctcaaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggca 3666556  T
Q  321 ttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| ||||||| ||||||||  |||||||||  ||||||||| |||||| ||||    
T  3666555 ttctacacaccgaaattcac--ttgatgcttcttgtgttttttctctcttctcc 3666504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 36949528 - 36949374
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||  ||||| ||| || |||||||||||||||||||||  |||| ||| ||| |||||||||||||||||||||||    
T  36949528 gatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgc 36949429  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| ||| ||||| |||||| || ||||| |||  |||||| ||||    
T  36949428 attcaacacaccgaaaatcacaattgatgtttcctgtgctttagctctcttctcc 36949374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 374
Target Start/End: Original strand, 12044485 - 12044640
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcaca-----cagtg 318  Q
    |||||||||||||| ||||||   ||||| |||||| |||||||| |||||||||||| ||||| |||||||  ||| ||||||||||||     |||||    
T  12044485 tttttgtactagatgtaatatatgaattacttgctcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcacacacagcagtg 12044584  T
Q  319 ctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    | ||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||    
T  12044585 cattccacacaccgaaattcaaagttgatgcttcctgtgtttttcctctcttctcc 12044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 8770986 - 8770839
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcactt-attagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||| |||||  ||||| ||||||  ||||||||||  || |||||| ||||| ||||||| ||||||||||||||||||| |||    
T  8770986 atatttttgtactagatctgatatgtgaattacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacacaatgc 8770887  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctct 367  Q
     |||   ||||  ||||||||||||||||||| |||||||||||||||    
T  8770886 attctggacactgaaattcacagttgatgcttcctgtgtttttcctct 8770839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 10754152 - 10754039
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  10754152 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10754053  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  10754052 ttcttctcttctcc 10754039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 21826938 - 21826812
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||  ||||| ||||||| ||||||||||||||||||| ||| ||| |||| || |||||||||||||||    
T  21826938 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttgat 21826839  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||||||||| ||||    
T  21826838 gattcctgtgcttttcctctcttctcc 21826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 26869693 - 26869819
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||  ||||| ||||||| ||||||||||||||||||| ||| |||   ||||| |||||||||||||||    
T  26869693 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgat 26869792  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||||||||| ||||    
T  26869793 gcttcctgtgcttttcctctcttctcc 26869819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 24435534 - 24435688
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||||||||||||||||   | ||| ||| ||  ||||| | |||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  24435534 gatatttttgtactagatctaatatatgagttacttgttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgc 24435633  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     |||  |||||| || | |||||| |||| || ||||||  ||||||||| ||||    
T  24435634 attcttcacaccgaattccacagtcgatgattcctgtgtgattcctctcttctcc 24435688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 13300638 - 13300697
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13300638 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 13300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 21323189 - 21323248
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  21323189 gtgttttcttagtccccaaattttgctaaaaatattttggaacgcaatctagaatatttt 21323248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 31732487 - 31732428
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31732487 gtgttttcctagtccccaagttttgctaaaaatattttggaacgcaatctacaatatttt 31732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 12044284 - 12044352
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||| | |||||||||||    
T  12044284 tttcttagtccccaagttttgttaaaa-tattttggaacgcaatctagaatattttggaacataatctga 12044352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 36936659 - 36936731
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  36936659 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 36936731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 36941413 - 36941485
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  36941413 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 36941485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 21323241 - 21323280
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataat 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21323241 aatattttggaacgcaatctaaaatattttagtacataat 21323280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 557637 - 557569
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||| |||||||| | ||| |||||||    
T  557637 tttcttagtccccaagttttgctaaaa-taatttggaacgcaatctagaatattttggaacacaatctga 557569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 562409 - 562341
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||| |||||||| | ||| |||||||    
T  562409 tttcttagtccccaagttttgctaaaa-taatttggaacgcaatctagaatattttggaacacaatctga 562341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 3666815 - 3666747
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||| | ||| |||||||    
T  3666815 tttcttagtccctaagttttgctaaaa-tattttggaacgcaatcgaaaatattttggaacacaatctga 3666747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 8771209 - 8771137
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||  |||||||||||||||||||| |||||| |||||||| |||||||||||| | ||| |||||||    
T  8771209 gtgttttctttgtccccaagttttgctaaaa-tattttagaacgcaaactaaaatattttggaacacaatctga 8771137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 26667941 - 26667892
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  26667941 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26667892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 26939538 - 26939489
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  26939538 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26939489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 29167405 - 29167454
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  29167405 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 29167454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 36424301 - 36424252
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  36424301 acacaccgaaattcacagttgatgttttctgtgtttttcctctcttctcc 36424252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 15395188 - 15395283
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctc--tcaaa-gtttctcacttattagtagtgaactttctctgtaaatagagagctcac 312  Q
    |||||||||||| |||||||||||||  ||| |||| ||   ||||| ||| ||||||||||||| ||||| ||||||| ||||||||||||||||    
T  15395188 gatatttttgtagtagatctaatatgtgaataatttacttgttcaaaagttactcacttattagttgtgaattttctctataaatagagagctcac 15395283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 15395003 - 15395061
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||| |||||||||| |||| ||||||| ||||||||    
T  15395003 gtgttttcttagtccccaagttttgct-aaaatattttagaacacaatctagaatatttt 15395061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 32460697 - 32460769
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||| |||| |||||| ||||||||| ||||||||| |||||||| | ||| |||||||    
T  32460697 gtgttttcttagtccccaaattttcctaaaa-tattttggagcgcaatctagaatattttggaacacaatctga 32460769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 42002379 - 42002307
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| || ||||||||||| |||||| || |||||||||||||||| |||||||| | ||| |||||||    
T  42002379 gtgttttcttagcccccaagttttactaaaa-taatttggaacgcaatctagaatattttggaacacaatctga 42002307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 27425301 - 27425243
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| | |||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  27425301 gtgttttcttactccctaagttttgttaaaa-tattttgaaacgcaatctaaaatatttt 27425243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 36430272 - 36430230
Alignment:
Q  327 acaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||    
T  36430272 acaccgaaattcatagttgatgcttcctgtgtttttcctctct 36430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 7452408 - 7452367
Alignment:
Q  333 aaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||    
T  7452408 aaattcacagttgatgcttcctgtgtttttcttctcttctcc 7452367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 23976714 - 23976786
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||| | ||||||||||||||| |||||||||| ||||| || |||||||| | ||| |||||||    
T  23976714 gtgttttcttagttctcaagttttgctaaaa-tattttggaatgcaatttagaatattttggaacacaatctga 23976786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 41099607 - 41099560
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  41099607 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 41099560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 3034386 - 3034232
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3034386 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 3034287  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  3034286 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3034232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 3693361 - 3693207
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3693361 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 3693262  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  3693261 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 8888673 - 8888519
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  8888673 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 8888574  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  8888573 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 8888519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 10585541 - 10585695
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  10585541 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 10585640  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  10585641 tttacatacaccaaaattcacagttgatgcttcctgtgtttttcctctcttctcc 10585695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 3673329 - 3673175
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3673329 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 3673230  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||    
T  3673229 attccacacactgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3673175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 8070422 - 8070268
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  8070422 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 8070323  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||| ||||| ||||||||||||||||||| |||| |||||||||||| ||||    
T  8070322 attccagacaccgaaattcacagttgatgcttcctgtatttttcctctcttctcc 8070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 8883913 - 8883759
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||    
T  8883913 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgc 8883814  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  8883813 attccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 8883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 6595744 - 6595899
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||  ||||| ||| || |||||||| |||||||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  6595744 gatatttttgtactagatctaatatgtgaattacttgttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgc 6595843  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcct 375  Q
     ||  ||||| ||||||||| ||||||||||| ||||||||||||||||| |||||    
T  6595844 attttacacatcaaaattcatagttgatgcttcctgtgtttttcctctcttctcct 6595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 45903896 - 45904050
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||| |||||||||||||| ||||| ||||||  |||||||||||||||||| |   ||||||||||| |||||||||||||||||  ||||    
T  45903896 gatatttttgtattagatctaatatgagaattacttgctcctaaagtttctcacttattactttggaactttctctataaatagagagctcacaatgtgc 45903995  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| |||||||||||| ||| || ||||| ||||||||||| ||||    
T  45903996 tttcaatacaccgaaattcacagttaatgtttcctgtgcttttcctctcttctcc 45904050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 9706983 - 9707096
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  9706983 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 9707082  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  9707083 ttcttctcttctcc 9707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 16749312 - 16749425
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  16749312 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 16749411  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  16749412 ttcttctcttctcc 16749425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 19776587 - 19776474
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  19776587 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 19776488  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  19776487 ttcttctcttctcc 19776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 18350154 - 18350280
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| | ||| ||||||| ||||||||| ||||||||| ||| ||| ||||||| |||| ||||||||||    
T  18350154 aattacttgttcccaaagtttctcacctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgat 18350253  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||||||||| ||||| ||||    
T  18350254 gcttcctgtgtttttcttctcttctcc 18350280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 220 - 351
Target Start/End: Original strand, 22758531 - 22758662
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  |||| |||||||||||||||| || |||| ||||| |||||||||| ||||||||||||    
T  22758531 gatatttaagtactagatctaataggtgcattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgc 22758630  T
Q  320 tttccacacaccaaaattcacagttgatgctt 351  Q
     ||| ||||||| |||||||||||||||||||    
T  22758631 attctacacaccgaaattcacagttgatgctt 22758662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 8223650 - 8223524
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| |||   || || |||||||||||||||    
T  8223650 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttgat 8223551  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||||||||| ||||    
T  8223550 gcttcctgtgcttttcctctcttctcc 8223524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 10585339 - 10585398
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10585339 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 10585398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 4106722 - 4106831
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||| ||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 4106821  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  4106822 tctcttctcc 4106831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 4110574 - 4110683
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||| ||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 4110673  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  4110674 tctcttctcc 4110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 8488783 - 8488895
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||| | ||| ||||||| ||| | ||||||||||||| ||||| ||    
T  8488783 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagt-cattctacacaccgaaagttacagttgatgcttcctgtgctt 8488881  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  8488882 ttcttctcttctcc 8488895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 15965753 - 15965644
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||| ||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15965654  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  15965653 tctcttctcc 15965644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 15969677 - 15969568
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||| ||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15969578  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  15969577 tctcttctcc 15969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 15973601 - 15973492
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||| ||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15973502  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  15973501 tctcttctcc 15973492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 367
Target Start/End: Complemental strand, 8197167 - 8197048
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| ||    || || |||||||||||||||    
T  8197167 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttgat 8197068  T
Q  348 gctttctgtgtttttcctct 367  Q
    |||| ||||| |||||||||    
T  8197067 gcttcctgtgcttttcctct 8197048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 29943 - 29817
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||| ||| ||||||||| ||||||||| ||| |||   ||||| |||||||||| ||||    
T  29943 aattacttgttcccaaagtttctcacctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatgat 29844  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||||||||| ||||    
T  29843 gattcctgtgcttttcctctcttctcc 29817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 366
Target Start/End: Original strand, 14425222 - 14425340
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||  ||||| |||||||  |||||||||||||||||| ||| |||   ||||| |||||||||||||||    
T  14425222 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttgat 14425321  T
Q  348 gctttctgtgtttttcctc 366  Q
    | || ||||| ||||||||    
T  14425322 gattcctgtgcttttcctc 14425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 37438952 - 37439065
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||| | ||| |||| || ||||||||||||||| |||  |||| ||    
T  37438952 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacgccgaaattcacagttgatacttcatgtgctt 37439051  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  37439052 ttcttctcttctcc 37439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 51923045 - 51922949
Alignment:
Q  252 atttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatg 348  Q
    ||||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| |||   ||||| ||||||||||||||||    
T  51923045 atttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatg 51922949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 12899094 - 12899193
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||| ||||||||||  ||||| ||| || ||||||||||||||||||||  ||||| ||||||| ||||||  ||| ||||| |||||    
T  12899094 gatatttttgtactaaatctaatatgtgaattacttgttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgc 12899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 18699200 - 18699283
Alignment:
Q  291 tctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||| ||||||||| ||||| ||||| ||||| ||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgcttttcttctcttctcc 18699283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 310
Target Start/End: Complemental strand, 16043244 - 16043154
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctc 310  Q
    |||||||||||| ||||||||| |||  | ||| ||| || |||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  16043244 gatatttttgtattagatctaacatgtgatttaattgttcccaaagtttttcacttattagtagagaactttctctataaatagagggctc 16043154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 315
Target Start/End: Complemental strand, 53358848 - 53358754
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacaca 315  Q
    ||||||||||||| |||||||||||   |||||||| |  |  ||||| |||||||||||| ||||||||||| | |||||||||||||||||||    
T  53358848 atatttttgtacttgatctaatatgtgtattatttgtttccttagtttttcacttattagttgtgaactttctttataaatagagagctcacaca 53358754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 3034589 - 3034517
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  3034589 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 3034517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 3693565 - 3693493
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  3693565 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 3693493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 8888876 - 8888804
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  8888876 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 8888804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 16023275 - 16023191
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaataga 304  Q
    |||||| |||||||||||||||||||  ||||| ||| || |||||||| |||| ||||||| ||||| ||||||| ||||||||    
T  16023275 gatattgttgtactagatctaatatgtgaattacttgttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 6595581 - 6595635
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  6595581 tttcttagtccccaagttttgctaaaa-tattttagaacgcaatctaaaatatttt 6595635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 310
Target Start/End: Complemental strand, 16048737 - 16048646
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaatt-atttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctc 310  Q
    |||||||||||||||||||||| |||  | || | ||| || |||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  16048737 gatatttttgtactagatctaacatgtgagtttaattgttcccaaagtttttcacttattagtagagaactttctctataaatagagggctc 16048646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 310
Target Start/End: Complemental strand, 16055919 - 16055829
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctc 310  Q
    |||||||||||||||||||||||| |  | ||| ||| ||  ||||||| |||||||||||||| ||||||||||| ||||| ||| ||||    
T  16055919 gatatttttgtactagatctaatacgtgagttacttgttcctaaagtttttcacttattagtagagaactttctctataaatggagggctc 16055829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 8070621 - 8070553
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||| |||||||| | ||| |||||||    
T  8070621 tttcttagtccccaagttttgctaaaa-taatttggaacgcaatctagaatattttggaacacaatctga 8070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 18467875 - 18467826
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  18467875 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 18467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 32473456 - 32473505
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  32473456 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 32473505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 35456332 - 35456404
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||||||||  ||||| ||||| ||||||||||||||    
T  35456332 caaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacaccaaa 35456404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 39775160 - 39775209
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  39775160 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 39775209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 45903730 - 45903802
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaa------tattttggaacgcaatctaaaatattttagtacat 146  Q
    ||||||||| ||||||||| ||||||||| ||      |||||||||||||||||||||||||||||||||||    
T  45903730 gtgttttcttagtccccaaattttgctaagaaaaaatatattttggaacgcaatctaaaatattttagtacat 45903802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 631887 - 631829
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||| ||||||||||||||  |||||| |||||||||    
T  631887 gtgttttcttagtccccaagttttgct-aaaatattttggaatacaatctgaaatatttt 631829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 3673511 - 3673454
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattt 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||||| |||||| ||||||||    
T  3673511 gtgttttcttagtccccaagttttgct-aaaataatttggaacacaatctgaaatattt 3673454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 14672048 - 14671982
Alignment:
Q  308 ctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||| ||| ||| ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 14671982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 47541093 - 47541154
Alignment:
Q  83 ttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtaca 145  Q
    |||||| ||||| || ||||||||||||  ||||||||||||||||| |||||||||||||||    
T  47541093 ttttctcagtcctcaggttttgctaaaag-attttggaacgcaatctgaaatattttagtaca 47541154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 8884112 - 8884044
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| |||||||||||||||||||||  |||| ||||||||||||| |||||||| | ||| |||||||    
T  8884112 tttcttagtccccaagttttgctaaaatgattt-ggaacgcaatctagaatattttggaacaaaatctga 8884044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 14438132 - 14438181
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||| ||||    
T  14438132 acacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 14438181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 18472669 - 18472620
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||| ||||    
T  18472669 acacaccgaaattcacagttaatgcttcctgtgtttttcctctcttctcc 18472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 47540705 - 47540774
Alignment:
Q  81 tgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctg 152  Q
    |||||||| ||||||||||||||    |||||||| ||||||||||||| ||||||||| ||||| ||||||    
T  47540705 tgttttcttagtccccaagttttat--aaaatattgtggaacgcaatctgaaatattttggtacaaaatctg 47540774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 429172 - 429061
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||| |||| |||||||||||||  ||||| ||  | |||||||| || |  ||||| | ||||| ||||||| |||||| |||||||||| ||| |    
T  429172 gatatttctgtagtagatctaatatgtgaattacttattgtcaaagttacttatatattacttgtgaattttctctataaataaagagctcacaaagttc 429073  T
Q  320 tttccacacacc 331  Q
     |||||||||||    
T  429072 attccacacacc 429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 8224023 - 8223965
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||  |||||||||||||||| ||| |||||| |||||||||||| ||||||||    
T  8224023 gtgttttcttggtccccaagttttgct-aaattattttagaacgcaatctagaatatttt 8223965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 12898900 - 12898954
Alignment:
Q  83 ttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattt 138  Q
    |||||| |||||| || ||||||||||| ||||||||||||||||||| |||||||    
T  12898900 ttttcttagtccctaaattttgctaaaa-tattttggaacgcaatctagaatattt 12898954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 18012042 - 18011968
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaa 335  Q
    |||||||| |||| ||||||| ||||| ||||||| |||||| | |||||||| |||  |||| |||||||||||    
T  18012042 caaagtttatcacatattagttgtgaattttctctataaataaatagctcacatagtcatttctacacaccaaaa 18011968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 47540843 - 47540889
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagt 266  Q
    |||||||||||||||||||||||||| |||||| ||  |||||||||    
T  47540843 gatatttttgtactagatctaatatgtaaattacttagtctcaaagt 47540889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 16023407 - 16023362
Alignment:
Q  108 aaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||||||||||||||| ||||||||| || || |||||||    
T  16023407 aaaatattttggaacgcaatctgaaatattttggtccagaatctga 16023362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 47540898 - 47540963
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcaca 313  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||    
T  47540898 aattacttgttcccaaagtttctcacatattagttgtgaattttctctataaatagaaagttcaca 47540963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 8197529 - 8197482
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  8197529 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 8197482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 16056070 - 16056038
Alignment:
Q  111 atattttggaacgcaatctaaaatattttagta 143  Q
    |||||||||||| ||||||||||||||||||||    
T  16056070 atattttggaacacaatctaaaatattttagta 16056038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 18349792 - 18349839
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  18349792 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 18349839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 41097309 - 41097463
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  41097309 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 41097408  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||||||| |||||||||||||||||||  |||| ||||||||||| ||||    
T  41097409 tttccacacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 41097463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 3094832 - 3094678
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  3094832 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgc 3094733  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||    
T  3094732 attccacacaccgaaattcacagttgatacttcctgtgtttttcctctcttctcc 3094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 40232739 - 40232893
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  40232739 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 40232838  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||  ||||||||||| ||||    
T  40232839 attccacacaccgaaattcacagttgatgcttcctgtacttttcctctcttctcc 40232893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 13894055 - 13893910
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    ||||||||||||||||||||||  ||||| ||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||| ||| |||    
T  13894055 tttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagttcacacaatgcattc 13893956  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
     ||||||  ||| ||||||||||||||| |||||||||||||||||    
T  13893955 tacacactgaaaatcacagttgatgcttcctgtgtttttcctctct 13893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 17213795 - 17213949
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||| |||| ||||||||  ||||| ||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |    
T  17213795 gatatttttgtattagaactaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtac 17213894  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| | ||||| ||||| | |||||||| || || |||||||||||||| ||||    
T  17213895 attcgatacaccgaaatttatagttgatgtttcctatgtttttcctctcttctcc 17213949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 1067224 - 1067070
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||| |||||||||||||||||  |||||  || ||  |||||||||||||||||||| ||||| ||||||| |||||||||| |||||||| |||    
T  1067224 gatattttggtactagatctaatatgtgaattacgtgttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcacacattgc 1067125  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||    ||| | ||||||||||||||||||| ||||||||||||||||| ||||    
T  1067124 attatggacaacgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 1067070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 8267203 - 8267292
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagct 309  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  8267203 gatatttttgtactagatctaatatgagaattacttgctcacaaagtttatcacttattagttgtgaactttctctataaatagagagct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 39243415 - 39243528
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  39243415 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 39243514  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  39243515 ttcttctcttctcc 39243528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 39246970 - 39247083
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  39246970 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 39247069  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  39247070 ttcttctcttctcc 39247083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 41387367 - 41387480
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||| |  |||||||    
T  41387367 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcatcatgtgttt 41387466  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  41387467 ttcttctcttctcc 41387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 19725257 - 19725409
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||| |||| ||||   ||||| |||||| |||||||||||| |||||||| ||||  ||||||| ||||||||||| ||||||| |||    
T  19725257 gatatttttgtactatatctgatatttgaattacttgctcccaaagtttctcatttattagttgtga--tttctctataaatagagagttcacacattgc 19725354  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     |||    |||| ||||||||||||||||||| ||||| |||||| |||| ||||    
T  19725355 attctgggcaccgaaattcacagttgatgcttcctgtgcttttcccctcttctcc 19725409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 374
Target Start/End: Original strand, 22428574 - 22428700
Alignment:
Q  247 aaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttga 346  Q
    |||||| ||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| |||   || || ||||||||||||||    
T  22428574 aaattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttga 22428672  T
Q  347 tgctttctgtgtttttcctctctgctcc 374  Q
    || || ||||| ||||||||||| ||||    
T  22428673 tgattcctgtgcttttcctctcttctcc 22428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 14804219 - 14804093
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| |||||||||||||||| || ||| ||| | || || |||||||||||||||    
T  14804219 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttgat 14804120  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||||||||| ||||    
T  14804119 gattcctgtgcttttcctctcttctcc 14804093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 33055723 - 33055625
Alignment:
Q  276 attagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| ||| | |||||||||||||||||||||| ||  |||||||||| ||||| ||||    
T  33055723 attagttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatgattcttgtgtttttcttctcttctcc 33055625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 1924450 - 1924559
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 1924549  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  1924550 tctcttctcc 1924559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 20923464 - 20923573
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 20923563  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  20923564 tctcttctcc 20923573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 27308243 - 27308332
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcaca 313  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||   ||||||||||||| ||||||| ||||||||| |||||||    
T  27308243 tttttgtactagatctaatatgtgaattatttgttctcaaagtttctcttatattagtagtgaattttctctataaatagagtgctcaca 27308332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 41097107 - 41097166
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41097107 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 41097166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 362
Target Start/End: Complemental strand, 21498366 - 21498252
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| | ||| ||||||| ||||||||| ||||||||| ||| ||| ||||||| |||| ||||||||||    
T  21498366 aattacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgat 21498267  T
Q  348 gctttctgtgttttt 362  Q
    |||| ||||| ||||    
T  21498266 gcttcctgtgctttt 21498252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 26199073 - 26198947
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || |||||||| |||| | ||||  ||||| ||||||| ||||||||||||||||||| ||| |||   ||||| |||||||||||||||    
T  26199073 aattacttgttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgat 26198974  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||||||||| ||||    
T  26198973 gcttcctgtgcttttcctctcttctcc 26198947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 52100601 - 52100726
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||| ||| ||| ||| ||||||| |||  ||||||||||    
T  52100601 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcatacaatgcattcaacacaccgaaa-acacagttgat 52100699  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||||||||||||||| ||||    
T  52100700 gattcctgtgtttttcctctcttctcc 52100726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 14819687 - 14819587
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||| ||| | || || |||||||||||||||    
T  14819687 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttgat 14819588  T
Q  348 g 348  Q
    |    
T  14819587 g 14819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 16836700 - 16836791
Alignment:
Q  283 gtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||| ||||||| ||||||||||||||||||||||| |||   ||||| |||||||||||||||||||  |||| ||||||||||| ||||    
T  16836700 gtgaattttctctataaatagagagctcacacagtgcattctggacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 16836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 362
Target Start/End: Complemental strand, 19727104 - 19726967
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    |||||||||||||||| |||||  ||||| ||||||||||| ||||||| |||||||| |||   ||||||  |||||||||||||||||||  || |||    
T  19727104 tttttgtactagatctgatatgtgaattacttgctctcaaaatttctcatttattagttgtgtgatttctcgataaatagagagctcacaca-agcattc 19727006  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgttttt 362  Q
       | ||| ||||||||||||||||||| |||| |||||    
T  19727005 tggataccgaaattcacagttgatgcttcctgtattttt 19726967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 2367758 - 2367632
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||  || ||  |||||| ||||||||||||||||||| ||| |||   ||||  |||||||||||||||    
T  2367758 aattacttgttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgat 2367659  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||| ||||| ||||    
T  2367658 gcttcctgtgcttttcttctcttctcc 2367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 3095035 - 3094963
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||| |||||||    
T  3095035 gtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatattttggaacacaatctga 3094963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 13894233 - 13894185
Alignment:
Q  90 agtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13894233 agtccccaagttttgctaaaa-tattttggaacgcaatctaaaatatttt 13894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 23284988 - 23285060
Alignment:
Q  81 tgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||| |||||| |||||||||  |||||||||||||||||||||| ||||||||| || || |||||||    
T  23284988 tgttttcttagtccctaagttttgcctaaaatattttggaacgcaatctgaaatattttggtgcacaatctga 23285060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 363
Target Start/End: Original strand, 26319584 - 26319667
Alignment:
Q  280 gtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttc 363  Q
    |||| ||||||||||| |||||| |||||||||||| ||| |||  ||||||||||  |||||||||||||| ||||| |||||    
T  26319584 gtagagaactttctctataaataaagagctcacacaatgcattcttcacaccaaaaaacacagttgatgcttcctgtgattttc 26319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 2384625 - 2384751
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||   | ||  |||||| ||||||||||||||||||| ||| |||   ||||  |||||||||||||||    
T  2384625 aattacttgttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgat 2384724  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||| ||||| ||||    
T  2384725 gcttcctgtgcttttcttctcttctcc 2384751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 26927153 - 26927202
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  26927153 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26927202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 40232541 - 40232613
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| |||||||||||| |||||||| ||||||| ||||||||||| |||||||| | ||| |||||||    
T  40232541 gtgttttcttagtccccaagttatgctaaaa-tattttgaaacgcaatctagaatattttggaacacaatctga 40232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 8267034 - 8267093
Alignment:
Q  93 ccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| | ||| |||||||    
T  8267034 ccccaagttttgctaaaa-tattttggaacgcaatctagaatattttggaacacaatctga 8267093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 16836443 - 16836502
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatct 151  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||||| ||| |||||    
T  16836443 gtccccaagttttgctaaaa-tattttagaacgcaatctagaatattttagaacacaatct 16836502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 51040942 - 51040992
Alignment:
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||| | |||||||||||||||| |||||||||||||||||||| ||||    
T  51040942 cacacatcgaaattcacagttgatgttttctgtgtttttcctctcttctcc 51040992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 1067360 - 1067292
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| |||| |||||||||||||||| |||||| |||||||||||| |||||||| | ||| |||||||    
T  1067360 tttcttagtctccaagttttgctaaaa-tattttagaacgcaatctagaatattttggaacacaatctga 1067292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 10135988 - 10135939
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||| ||||    
T  10135988 acacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 10135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 19725055 - 19725109
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaata 135  Q
    |||||||||  |||||||||||||||| |||||||||| |||||||||||| ||||    
T  19725055 gtgttttctttgtccccaagttttgct-aaaatattttagaacgcaatctagaata 19725109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 52100233 - 52100291
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||  |||||||||||||||| ||| |||||| |||||||||||| ||||||||    
T  52100233 gtgttttcttggtccccaagttttgct-aaattattttagaacgcaatctagaatatttt 52100291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 19727296 - 19727252
Alignment:
Q  94 cccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||    
T  19727296 cccaagttttgctaaaa-tattttagaacgtaatctaaaatatttt 19727252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 26319423 - 26319456
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagta 143  Q
    ||||||||||||| ||||||||||||||||||||    
T  26319423 aatattttggaacacaatctaaaatattttagta 26319456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 21498728 - 21498681
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  21498728 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 21498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 23254368 - 23254440
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctg 152  Q
    ||||||||| |||||  ||||||||   ||||||||||||||| ||||| |||||||||| || || ||||||    
T  23254368 gtgttttcttagtccataagttttgactaaaatattttggaacacaatcgaaaatattttggtgcacaatctg 23254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 26199433 - 26199394
Alignment:
Q  99 gttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  26199433 gttttgctaaaa-tattttagaacgcaatctaaaatatttt 26199394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 39036772 - 39036816
Alignment:
Q  109 aaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||    
T  39036772 aaatattttggtatgcaatctaatatattttagtacatgatctga 39036816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 111; Significance: 6e-56; HSPs: 4)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 47324 - 47478
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47324 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 47423  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| || ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  47424 tttacatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 47478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 52268 - 52422
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  52268 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 52367  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| || ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  52368 tttacatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 52422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 52066 - 52125
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52066 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 52125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 47122 - 47181
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  47122 gtgttttcttagtccccaagttttgctaaaaatattttagaacgcaatctagaatatttt 47181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 108; Significance: 4e-54; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 9231 - 9386
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9231 gatatttttgtactagatctaatatgagaattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 9330  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtg-tttttcctctctgctcc 374  Q
     ||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||||    
T  9331 attccacacaccgaaattcacagttgatgcttcctgtgttttttcctctcttctcc 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 9028 - 9087
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9028 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 9087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 9102 - 9146
Alignment:
Q  109 aaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||| | ||||||||| |||||||||| ||||||||||    
T  9102 aaatattttggtaagcaatctaatatattttagtgcataatctga 9146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 27256980 - 27256826
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  27256980 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgc 27256881  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  27256880 tttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 27256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 9650311 - 9650466
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  9650311 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgc 9650410  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtg-tttttcctctctgctcc 374  Q
     ||||||| | | ||||||||||||||||||| ||||| |||||||||||| ||||    
T  9650411 attccacaaatcgaaattcacagttgatgcttcctgtgttttttcctctcttctcc 9650466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 40864714 - 40864868
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||| ||||||||||| ||||| |||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |    
T  40864714 gatatttttgtactaaatctaatatgagaattacttgctcccaaagttactcacttattagttgtgaactttctctataaatagagagctcacacagtac 40864813  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  40864814 tttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 40864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 8076789 - 8076644
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    |||||||||||||||||||||   ||||| |||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||    
T  8076789 tttttgtactagatctaatatatgaattacttgctcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattc 8076690  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||    
T  8076689 cacacaccgaaattcacagttgatgcttcatgtgtttttcctctct 8076644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 224 - 374
Target Start/End: Complemental strand, 47102268 - 47102128
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    |||||||||||||||||||||   ||||| |||||| ||||||||||||||||||||||||          ||| ||||||||||||||||||||| |||    
T  47102268 tttttgtactagatctaatatatgaattacttgctcccaaagtttctcacttattagtagt----------tgtgaatagagagctcacacagtgcattc 47102179  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  47102178 cacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 47102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 374
Target Start/End: Complemental strand, 19641041 - 19640888
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgct 320  Q
    |||||| |||||||||||||| | |  ||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||| | |||||  || ||    
T  19641041 atatttgtgtactagatctaacacgtgaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagtgttcacattgttct 19640942  T
Q  321 ttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| | ||||| |||||||||||||||||||  |||| ||||||||||| ||||    
T  19640941 ttcgatacaccgaaattcacagttgatgcttcttgtgcttttcctctcttctcc 19640888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 334
Target Start/End: Complemental strand, 9008899 - 9008786
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgct 320  Q
    ||||||||||| ||||| |||||||  ||||||||| || ||||||||||||||||||||| ||||| ||||||| |||||||||||||| || || ||     
T  9008899 atatttttgtaatagatttaatatgtgaattatttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgca 9008800  T
Q  321 ttccacacaccaaa 334  Q
    ||||||||||||||    
T  9008799 ttccacacaccaaa 9008786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 369
Target Start/End: Original strand, 14927987 - 14928136
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||| ||||||||||||||| |   |||| ||| |  ||||||||||||||||||||| || |||  ||||| |||||||||  ||||||||||||    
T  14927987 gatattttagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgc 14928086  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
     ||| ||||||| ||||||||||||||||||| ||||| ||||| |||||    
T  14928087 attctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 14928136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 369
Target Start/End: Original strand, 15351453 - 15351602
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||| ||||||||||||||| |   |||| ||| |  ||||||||||||||||||||| || |||  ||||| |||||||||  ||||||||||||    
T  15351453 gatattttagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgc 15351552  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
     ||| ||||||| ||||||||||||||||||| ||||| ||||| |||||    
T  15351553 attctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 15351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 16459773 - 16459886
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| || || |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  16459773 caaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 16459872  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  16459873 ttcttctcttctcc 16459886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 20488650 - 20488537
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||  |||| ||    
T  20488650 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcgtgtgctt 20488551  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  20488550 ttcttctcttctcc 20488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 20485288 - 20485176
Alignment:
Q  262 aaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttt 361  Q
    |||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||  |||| |||    
T  20485288 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcgtgtgcttt 20485189  T
Q  362 tcctctctgctcc 374  Q
    || ||||| ||||    
T  20485188 tcttctcttctcc 20485176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 18426629 - 18426516
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  18426629 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 18426530  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  18426529 ttcttctcttctcc 18426516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 19096970 - 19096843
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacacc-aaaattcacagttga 346  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||| |||   || || |||||||||||||||    
T  19096970 aattacttgttcgcaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttga 19096871  T
Q  347 tgctttctgtgtttttcctctctgctcc 374  Q
    |||||  |||||||||||||||| ||||    
T  19096870 tgcttcatgtgtttttcctctcttctcc 19096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 14259708 - 14259595
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||    ||||||||||||||||||| ||||| ||    
T  14259708 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgatgcttcctgtgctt 14259609  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  14259608 ttcttctcttctcc 14259595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 27257162 - 27257101
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttag 141  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27257162 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatattttag 27257101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 45169323 - 45169436
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||| | ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  45169323 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacaccgaaattcacagttgatacttcctgtgctt 45169422  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  45169423 ttcttctcttctcc 45169436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 8954645 - 8954749
Alignment:
Q  247 aaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttga 346  Q
    |||||| ||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| ||||  || || |||||| |||||||    
T  8954645 aaattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttga 8954744  T
Q  347 tgctt 351  Q
    |||||    
T  8954745 tgctt 8954749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 29727152 - 29727304
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcactt----attagtagtgaactttctctgtaaatagagagctcacacag 316  Q
    |||||||||||||| | ||||||||  | ||| ||| |  |||||||||||| ||    |||||| ||||| ||||||| |||||||||||||||||| |    
T  29727152 atatttttgtactatacctaatatgtgagttacttgtttgcaaagtttctcatttgttaattagttgtgaattttctctataaatagagagctcacacgg 29727251  T
Q  317 tgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
    ||| |||   |||||||||||||||||||||| || ||||| |||||||||||    
T  29727252 tgcattctggacaccaaaattcacagttgatgtttcctgtgcttttcctctct 29727304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 838811 - 838937
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| | ||| ||||||| ||||||||||||||||||| ||| |||   || || |||||||| ||||||    
T  838811 aattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgat 838910  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| |||||||||| |||||| ||||    
T  838911 gcttcctgtgttttttctctcttctcc 838937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 1203991 - 1204117
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| | ||| ||||||| ||||||||||||||||||| ||| |||   || || |||||||| ||||||    
T  1203991 aattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgat 1204090  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| |||||||||| |||||| ||||    
T  1204091 gcttcctgtgttttttctctcttctcc 1204117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 40864551 - 40864609
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattt 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40864551 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatattt 40864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 363
Target Start/End: Complemental strand, 36477685 - 36477577
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    |||||||||  | ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||       |||||| |||||||||||||||    
T  36477685 aattatttgtccccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatg-------cacaccgaaattcacagttgat 36477593  T
Q  348 gctttctgtgtttttc 363  Q
    |||| |||||||||||    
T  36477592 gcttcctgtgtttttc 36477577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 845987 - 846113
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||| ||||||| ||| ||| | || || |||||||  ||||||    
T  845987 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgat 846086  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| |||| |||||| ||||    
T  846087 gcttcctgtgctttttctctcttctcc 846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 853364 - 853490
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||| ||||||| ||| ||| | || || |||||||  ||||||    
T  853364 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgat 853463  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| |||| |||||| ||||    
T  853464 gcttcctgtgctttttctctcttctcc 853490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 1211368 - 1211494
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||| ||||||| ||| ||| | || || |||||||  ||||||    
T  1211368 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgat 1211467  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| |||| |||||| ||||    
T  1211468 gcttcctgtgctttttctctcttctcc 1211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 345
Target Start/End: Original strand, 11017433 - 11017557
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||  |||||||||||||||  ||||||||  |||||||||||||||||||||||| ||||| ||||| | ||||||||||| || | |||| |    
T  11017433 gatatttttacactagatctaatatgtgaattatttt-tctcaaagtttctcacttattagttgtgaattttctatataaatagagaggtcgcgcagtac 11017531  T
Q  320 tttccacacaccaaaattcacagttg 345  Q
     ||| |  |||| |||||||||||||    
T  11017532 attctatccaccgaaattcacagttg 11017557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 11297495 - 11297413
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatag 303  Q
    |||||||||||||||||||||||||  ||||| ||| || ||||||||||||| ||||||| ||||  ||||||| |||||||    
T  11297495 atatttttgtactagatctaatatgtgaattacttgttcacaaagtttctcacatattagttgtgatttttctctataaatag 11297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 32302541 - 32302428
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    |||| |||||||||||||||| || |||| ||||| |||||| ||| || |||  |||| ||| ||||||| |||||||||||||||| || ||||| ||    
T  32302541 caaaatttctcacttattagttgtaaactatctctataaatatagaactgacatggtgcattctacacaccgaaattcacagttgatgtttcctgtgctt 32302442  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  32302441 ttcttctcttctcc 32302428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 16580972 - 16580818
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||||||||||| | || |||| || |  ||||||| || ||||||||||||    
T  16580972 gatatttaagtactagatctaataggtgtattacttgtttccaaagtttctcacttattaattgtaaactatcccaataaatagggaactcacacagtgc 16580873  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||  ||||| | |||||||||||||||||||  |||| ||||| ||||| ||||    
T  16580872 attgtacacaacgaaattcacagttgatgcttcatgtgcttttcttctcttctcc 16580818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 1043962 - 1043873
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagct 309  Q
    |||||||||||||||||||||||| |  ||||| ||| |  ||||||||||||| ||||| | ||||| ||||||| |||||| ||||||    
T  1043962 gatatttttgtactagatctaatacgtgaattacttgtttccaaagtttctcacatattaattgtgaattttctctataaataaagagct 1043873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 10499496 - 10499569
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| |||    ||||| ||||||||||||||    
T  10499496 caaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacaccaaa 10499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 10504525 - 10504598
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| |||    ||||| ||||||||||||||    
T  10504525 caaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacaccaaa 10504598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 10532225 - 10532298
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||||||||||||| ||||| ||||||| ||| ||||||  ||||  ||||| ||||||||||||||    
T  10532225 caaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacaccaaa 10532298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 11017217 - 11017289
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||  ||||||||||||||||||||| |||||||||||| |||||| |||||||| | ||| |||||||    
T  11017217 gtgttttcatagtccccaagttttgctaaaa-tattttggaacgtaatctagaatattttggaacacaatctga 11017289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 26341870 - 26341821
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  26341870 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26341821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 47102475 - 47102403
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| |||| |||| ||||||||||| ||||||||||||||||||| |||||||| | ||| |||||||    
T  47102475 gtgttttcttagtctccaaattttgctaaaa-tattttggaacgcaatctagaatattttggaacacaatctga 47102403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 313
Target Start/End: Original strand, 11247752 - 11247841
Alignment:
Q  222 tatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcaca 313  Q
    |||||||||||||||| |||||||  ||||||||| || |||||||  |||| | ||| | ||||| ||||||| |||||| ||||||||||    
T  11247752 tatttttgtactagatataatatgtgaattatttgttcccaaagtt--tcacatgttaattgtgaattttctctataaatatagagctcaca 11247841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 11247499 - 11247441
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||| ||||||||||||| ||||||| |||||||||| |||||| ||||||    
T  11247499 gtgttttcttagtacccaagttttgct-aaaatatcttggaacgcagtctaaattatttt 11247441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 19641228 - 19641173
Alignment:
Q  98 agttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||||||||||||||| || |||||| ||||||| || ||| |||||||    
T  19641228 agttttgctaaaaatattttggagcgtaatctagaatatttcagaacacaatctga 19641173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 27257110 - 27257067
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||    
T  27257110 aatattttagaacccaatctaaaatattttagtacatgatctga 27257067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 40864611 - 40864645
Alignment:
Q  119 gaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||||||||||||||||||||| ||||||    
T  40864611 gaacgcaatctaaaatattttagtacatgatctga 40864645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 13343821 - 13343894
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||||| || ||||   | ||| ||||||||||||||    
T  13343821 caaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacaccaaa 13343894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 224 - 374
Target Start/End: Original strand, 10160075 - 10160225
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    ||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||    
T  10160075 tttttgtactagatctaatatgagaattacttactcccaaagtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattc 10160174  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  10160175 cacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 10160225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 28855873 - 28855720
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||  |||||||||||| |||||||| ||||| |||| || ||||||||||||||||| |||||    
T  28855873 gatatttttgtactagatctaatatgagaattacttgcttccaaagtttctcatttattagttgtgaa-tttccctataaatagagagctcacaaagtgc 28855775  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| |||||||||||||||| || || |||||||||||||| ||||    
T  28855774 attcgacacaccgaaattcacagttgatgattcctatgtttttcctctcttctcc 28855720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 30658914 - 30658766
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| |||      ||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  30658914 gatatttttgtactagatctaatatgataat------ctcccaaagtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgc 30658821  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||||||| ||  |||||||||||||||||||  | ||||| |||||||| ||||    
T  30658820 attccacatacacaaattcacagttgatgcttcatatgtttgtcctctcttctcc 30658766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 6297244 - 6297397
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||| |||||||||||||||||||||| ||||  |||||| |||||||| |||||||||||| || ||||||||||  |||||||||||||||||||| |    
T  6297244 gatacttttgtactagatctaatatgagaattgcttgctcccaaagtttatcacttattagttgtcaactttctct-aaaatagagagctcacacagttc 6297342  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||  |||||||||||||||||||  |||| ||||||||||| ||||    
T  6297343 tttctatacacagaaattcacagttgatgcttcatgtgcttttcctctcttctcc 6297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 22845145 - 22844991
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||  ||||| ||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  22845145 gatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgc 22845046  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
      |  ||| | | ||||||||| |||||||||  |||||||||||||||| ||||    
T  22845045 aatgtacagaacgaaattcacaattgatgcttcttgtgtttttcctctcttctcc 22844991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 25375632 - 25375478
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||| ||||||||||||||||||||  ||||| ||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  25375632 gatatatttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgc 25375533  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||  |||||||||||||||| || | ||  ||||||||||| ||||    
T  25375532 attctacacactgaaattcacagttgatgattccggtacttttcctctcttctcc 25375478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 221 - 374
Target Start/End: Original strand, 7559702 - 7559856
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcactt-attagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||| |||||  ||||| ||||||  ||||||||||  || |||||| ||||| ||||||| ||||||||||||||||||| |||    
T  7559702 atatttttgtactagatctgatatgtgaattacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacacaatgc 7559801  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     |||   ||||  ||||||||||||||||||| |||||||||| |||||| ||||    
T  7559802 attctggacacttaaattcacagttgatgcttcctgtgttttttctctcttctcc 7559856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 23068104 - 23068258
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||| ||||||||| || |||| ||||| |||||||||| ||||||||||||    
T  23068104 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgc 23068203  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  23068204 attctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 23068258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 1284216 - 1284103
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  1284216 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 1284117  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  1284116 ttcttctcttctcc 1284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 34070134 - 34070008
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| ||| ||||||| |||| ||||||||||    
T  34070134 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgat 34070035  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||| ||||| ||||| ||||    
T  34070034 gcttccagtgcttttcttctctcctcc 34070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 30344312 - 30344421
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 30344411  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  30344412 tctcttctcc 30344421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 24292841 - 24292967
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| | ||||| ||||| ||||||| ||||||||| ||||||||| ||| |||   || || |||||||||||||||    
T  24292841 aattacttgttcccaaagtttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgat 24292940  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||||||||| ||||    
T  24292941 gcttcctgtgcttttcctctcttctcc 24292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 377683 - 377795
Alignment:
Q  262 aaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttt 361  Q
    |||||||||||| | ||||| ||||| ||| ||| ||||||||||||||||| | ||| || |  ||||| ||||||||||||||||||| |||||||||    
T  377683 aaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatgcttcctgtgtttt 377782  T
Q  362 tcctctctgctcc 374  Q
    || ||||| ||||    
T  377783 tcttctcttctcc 377795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 26897342 - 26897215
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| |||   || || |||||||||||||||    
T  26897342 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttgat 26897243  T
Q  348 gctttctgtg-tttttcctctctgctcc 374  Q
    |||| ||||| ||||| |||||| ||||    
T  26897242 gcttcctgtgctttttgctctcttctcc 26897215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 6856912 - 6856786
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| | | |||     ||| |||||||||||||||    
T  6856912 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttgat 6856813  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||| ||||| ||||    
T  6856812 gcttcctgtgcttttcttctcttctcc 6856786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 24286273 - 24286399
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||| ||||||| | ||||| ||||| ||||||| ||||||||| ||||||||| ||| |||   || || |||||||||||||||    
T  24286273 aattacttgttcccaaagcttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgat 24286372  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||||||||| ||||    
T  24286373 gcttcctgtgcttttcctctcttctcc 24286399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 42248929 - 42248816
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| |||||||   ||| ||||||| ||||||||| ||||||||| ||| ||| ||||||| |||| |||| ||||||||| ||||| ||    
T  42248929 caaagtttctcacctattagttcggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatgcttcctgtgctt 42248830  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  42248829 ttcttctcttctcc 42248816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 362
Target Start/End: Complemental strand, 9785891 - 9785751
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||||||||||||| || |||| || || |||||||||| ||  ||||||||    
T  9785891 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaact--cacagtgc 9785794  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgttttt 362  Q
     ||  ||||||| ||||||||||||||||||| ||||| ||||    
T  9785793 attttacacaccgaaattcacagttgatgcttcctgtgctttt 9785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 30635496 - 30635393
Alignment:
Q  263 aagtttctcacttattagtagtgaactttctctgtaaatag--agagctcacacagtgctttccacacacc-aaaattcacagttgatgctttctgtgtt 359  Q
    ||||||||||||||||||| ||||| ||||| | ||||||   |||||||||| ||||| ||  ||||||| |||||||||||||||||||| ||||| |    
T  30635496 aagtttctcacttattagttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgcttcctgtgct 30635397  T
Q  360 tttc 363  Q
    ||||    
T  30635396 tttc 30635393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 6297063 - 6297122
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||| |||||||||| || ||||||||||||||||||||||| ||||||||    
T  6297063 gtgttttcttagttcccaagttttactgaaaatattttggaacgcaatctagaatatttt 6297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 6297115 - 6297158
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  6297115 aatattttggaacgcaatctaaaatattttagtacatgatctga 6297158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 17452937 - 17453056
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattag-----tagtgaactttctctgtaaatagagagctcacac 314  Q
    |||||||||||||||||| ||| |||  ||||| ||| || ||||||||||||||||||||     | || || ||||||| |||||||||| ||||||     
T  17452937 gatatttttgtactagatataacatgtgaattacttgttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacat 17453036  T
Q  315 agtgctttccacacaccaaa 334  Q
    ||| | ||||||||||||||    
T  17453037 agtacattccacacaccaaa 17453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 10159868 - 10159936
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||| |||||||| | ||| |||||||    
T  10159868 tttcttagtccccaagttttgctaaaa-taatttggaacgcaatctagaatattttggaacacaatctga 10159936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 18345074 - 18345025
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  18345074 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 18345025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 28856065 - 28856017
Alignment:
Q  90 agtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  28856065 agtccccaagttttgctaaaa-tattttggaacgcaatctagaatatttt 28856017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 17968397 - 17968444
Alignment:
Q  327 acaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  17968397 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 17968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 30641462 - 30641545
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatag 303  Q
    ||||||||||||||||||||||||||  ||||| ||| ||  |||||||||||| ||||||| | ||  ||||||| |||||||    
T  30641462 gatatttttgtactagatctaatatgtgaattacttgttccaaaagtttctcacatattagttgagatttttctctataaatag 30641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 30659086 - 30659032
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||| ||||||||    
T  30659086 tttcttagtccccaagttttgctaaaa-taatttggaacgcaatctataatatttt 30659032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 7559490 - 7559551
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||| | ||| |||||||    
T  7559490 gtccccaagttttgctaaaa-tattttagaacgcaaactaaaatattttggaacacaatctga 7559551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 17327762 - 17327708
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacaca 315  Q
    |||| |||||||||||||||| || || ||||||| |||||||||||||||||||    
T  17327762 caaaatttctcacttattagttgtaaattttctctataaatagagagctcacaca 17327708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 30629787 - 30629723
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtaca 145  Q
    ||||||||| ||||||||| ||||||| ||||||||||||| || ||||| ||||||||| |||||    
T  30629787 gtgttttcttagtccccaaattttgct-aaaatattttggatcgtaatctgaaatattttggtaca 30629723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 17327963 - 17327904
Alignment:
Q  93 ccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||| | ||| |||||||    
T  17327963 ccccaagttttactaaaa-tatttttgaacgcaatctaaaatattttggaacagaatctga 17327904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 30619784 - 30619713
Alignment:
Q  81 tgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||| |||| |||| ||||| ||||| |||||||||||| ||||| |||||||||| |||| |||||||    
T  30619784 tgttttcttagtctccaaattttgttaaaa-tattttggaacgtaatctgaaatattttaatacagaatctga 30619713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 30640160 - 30640223
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtac 144  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| |||| | ||||||||| ||||    
T  30640160 gtgttttcgtagtccccaagttttgct-aaaatattttggaacacaatttgaaatattttggtac 30640223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 24292598 - 24292656
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||  |||||||||||||||| ||| |||||| |||||||||||| ||||||||    
T  24292598 gtgttttcttggtccccaagttttgct-aaattattttagaacgcaatctagaatatttt 24292656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 35602578 - 35602521
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||| | ||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  35602578 gtgtttttttagtccccaagttttgct-aaaata-tttggaacgcaatctataatatttt 35602521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 34070496 - 34070449
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  34070496 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 34070449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 49335 - 49489
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  49335 gatatttttgtactagatttaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgc 49434  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  49435 tttcaatacaccgaaattcacagttgacgcttcctgtgtttttcctctcttctcc 49489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 49112 - 49171
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  49112 gtgttttcttagtctccaagttttgctaaaagtattttggaacgcaatctagaatatttt 49171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 149299 - 149145
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  149299 gatatttttgtactagatttaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgc 149200  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  149199 tttcaatacaccgaaattcacagttgacgcttcctgtgtttttcctctcttctcc 149145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 149522 - 149463
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  149522 gtgttttcttagtctccaagttttgctaaaagtattttggaacgcaatctagaatatttt 149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 7902462 - 7902608
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  7902462 gatatttttatactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgc 7902561  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctc 366  Q
    ||| |||||||| ||||||||| ||||||||| ||||| ||||||||    
T  7902562 tttacacacaccgaaattcacatttgatgcttcctgtgcttttcctc 7902608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 34561167 - 34561013
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  34561167 gatatttttgtactagatttaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgc 34561068  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  34561067 tttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 34561013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 13521336 - 13521491
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  13521336 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgc 13521435  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtg-tttttcctctctgctcc 374  Q
     ||||||| | | ||||||||||||||||||| ||||| |||||||||||| ||||    
T  13521436 attccacaaatcgaaattcacagttgatgcttcctgtgttttttcctctcttctcc 13521491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 220 - 369
Target Start/End: Original strand, 8660754 - 8660903
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8660754 gatatttttgtactagatctaatatgaaaattatttgttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcacacagtgc 8660853  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctct 369  Q
      |  ||||||| | ||||||||||||||||| ||||| |||||||||||    
T  8660854 agtatacacaccgagattcacagttgatgcttcctgtgcttttcctctct 8660903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 3997416 - 3997567
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||||||||||||||||   ||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||    
T  3997416 gatatttttgtactagatcta---tgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatattgc 3997512  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  3997513 tttacacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 220 - 351
Target Start/End: Original strand, 31297845 - 31297977
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaatta-tttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtg 318  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  31297845 gatatttttgtactagatctaatatgagaattactttgctcccaaagtttctcacttattagttgtgaactctctctataaatagagagctcacacagtg 31297944  T
Q  319 ctttccacacaccaaaattcacagttgatgctt 351  Q
    | ||||| ||||| ||||||||| |||||||||    
T  31297945 cattccatacaccgaaattcacaattgatgctt 31297977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 374
Target Start/End: Complemental strand, 41817534 - 41817371
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctct-------------gtaaatagagagctc 310  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||             |||||||||||||||    
T  41817534 tttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctagagagcttctctgtaaatagagagctc 41817435  T
Q  311 acacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||||| ||| ||||||| |||||||||||||||||||  |||||||||||||||| ||||    
T  41817434 acacagtgcattctacacaccgaaattcacagttgatgcttcttgtgtttttcctctcttctcc 41817371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 224 - 374
Target Start/End: Complemental strand, 47575400 - 47575251
Alignment:
Q  224 tttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttc 323  Q
    |||||||||||||||||||||   ||||| |||||| || |||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||| |||    
T  47575400 tttttgtactagatctaatatatgaattacttgctc-catagtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattc 47575302  T
Q  324 cacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||| ||||||| |||||||||   ||||||||||||||||| ||||    
T  47575301 cacacaccgaaattcaaagttgatgcaacctgtgtttttcctctcttctcc 47575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 15225880 - 15225754
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  15225880 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttgat 15225781  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||| ||||| ||||    
T  15225780 gcttcctgtgcttttcttctcttctcc 15225754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 15011167 - 15011321
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||||||||||||| || |||| ||||| |||||||||| ||||||||||||    
T  15011167 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgc 15011266  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||  ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  15011267 attatacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 15011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 12488500 - 12488387
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  12488500 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 12488401  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  12488400 ttcttctcttctcc 12488387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 14868460 - 14868573
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    |||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||| |||   || || |||||||||||||||| || ||||| ||    
T  14868460 caaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgtgctt 14868559  T
Q  361 ttcctctctgctcc 374  Q
    ||||||||| ||||    
T  14868560 ttcctctcttctcc 14868573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 14877474 - 14877361
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    |||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||| |||   || || |||||||||||||||| || ||||| ||    
T  14877474 caaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgtgctt 14877375  T
Q  361 ttcctctctgctcc 374  Q
    ||||||||| ||||    
T  14877374 ttcctctcttctcc 14877361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34561349 - 34561288
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttag 141  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34561349 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttag 34561288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 374
Target Start/End: Original strand, 14898994 - 14899121
Alignment:
Q  247 aaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttga 346  Q
    |||||| ||| || |||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||| |||   || || ||||||||||||||    
T  14898994 aaattacttgttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttga 14899093  T
Q  347 tgctttctgtgtttttcctctctgctcc 374  Q
    || ||  |||| ||||||||||| ||||    
T  14899094 tgattcatgtgcttttcctctcttctcc 14899121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 10713642 - 10713529
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    |||||||||||||| |||||| || ||   ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  10713642 caaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10713543  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  10713542 ttcttctcttctcc 10713529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 10927412 - 10927299
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    |||||||||||||| |||||| || ||   ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  10927412 caaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10927313  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  10927312 ttcttctcttctcc 10927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 14953451 - 14953560
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 14953550  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  14953551 tctcttctcc 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 7902260 - 7902319
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7902260 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 7902319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 9185063 - 9185189
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||||||||||| ||||| |||||||  |||||||||||||||||| ||| |||   || || ||||||| |||||||    
T  9185063 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttgat 9185162  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||||||||| ||||    
T  9185163 gattcctgtgcttttcctctcttctcc 9185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 25690692 - 25690583
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    |||||||||||||||||  | || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 25690593  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  25690592 tctcttctcc 25690583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 3997214 - 3997273
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3997214 gtgttttcttagtccccaagttttgctaaaaatattttggaaagcaatctagaatatttt 3997273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 9190928 - 9191054
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||||||||||| ||||| |||||||  |||||||||||||||||| ||| ||    || || ||||||| |||||||    
T  9190928 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttgat 9191027  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||||||||| ||||    
T  9191028 gattcctgtgcttttcctctcttctcc 9191054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 41817732 - 41817659
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| |||||| ||||||||||||| |||||||||||| ||||||| |||||||| | |||||||||||    
T  41817732 gtgttttcttagtccctaagttttgctaaatatattttggaacacaatctagaatattttggaacataatctga 41817659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 26034903 - 26034836
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacaca 315  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  26034903 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacaca 26034836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 31297667 - 31297724
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattt 138  Q
    ||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||    
T  31297667 gtgttttcttagcccccaagttttgctaaaa-tattttggaacacaatctaaaatattt 31297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 52742576 - 52742690
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgct 320  Q
    |||||||| |||||||||||||| |  ||||| ||  | ||||| |||||| | ||||||| || || ||||||| ||||||||||||||||| ||| |     
T  52742576 atatttttctactagatctaatacgtgaattacttattttcaaaatttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttca 52742675  T
Q  321 ttccacacaccaaaa 335  Q
    ||||||||| |||||    
T  52742676 ttccacacatcaaaa 52742690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 34561299 - 34561254
Alignment:
Q  108 aaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  34561299 aaaatattttagaacgcaatctaaaatattttagtacatgatctga 34561254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 39320259 - 39320210
Alignment:
Q  266 tttctcacttattagtagtgaactttctctgtaaatagagagctcacaca 315  Q
    |||||||||||||||| |||||||||| || |||||||||||||||||||    
T  39320259 tttctcacttattagttgtgaactttcactataaatagagagctcacaca 39320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 52742413 - 52742467
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  52742413 tttcttagtccccaagttttgcttaaa-tattttggaacgcaatctcaaatatttt 52742467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 18023276 - 18023210
Alignment:
Q  308 ctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||||| ||| ||| ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 18023210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 5270856 - 5270905
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||| ||||    
T  5270856 acacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 5270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 5927658 - 5927699
Alignment:
Q  333 aaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  5927658 aaattcacagttgatgcttcctgtgtttttcctctcttctcc 5927699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 39320507 - 39320435
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||| | ||||||||| ||||||||||| |||||||||||| |||||| |||||||| | ||| |||||||    
T  39320507 gtgtttttttagtccccaaattttgctaaaa-tattttggaacgtaatctagaatattttggaacacaatctga 39320435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 3310150 - 3310092
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||| | ||||||||| ||||| ||||||||||| ||||||||||||||||    
T  3310150 gtgttttcttagttctcaagttttgttaaaa-tattttggaacccaatctaaaatatttt 3310092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 31728805 - 31728846
Alignment:
Q  333 aaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||    
T  31728805 aaattcacagttgatgcttcctgtgtttttcttctcttctcc 31728846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 35055 - 35209
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||| ||||||||||| ||||| |||||| ||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35055 gatatttttgtactatatctaatatgagaattacttgctcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcacacagtgc 35154  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  35155 tttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 35209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34873 - 34934
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttag 141  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34873 gtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatattttag 34934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 34925 - 34968
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||| |||||||||||||||||||||||||||| ||||||    
T  34925 aatattttagaacgcaatctaaaatattttagtacatgatctga 34968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 9e-49; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 6112110 - 6112264
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||||    
T  6112110 gatatttttgtactagatctaatatgataattacttgctcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgc 6112209  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| |||||||||||||||||||  |||| ||||||||||| ||||    
T  6112210 attcaacacaccgaaattcacagttgatgcttcttgtgcttttcctctcttctcc 6112264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 364
Target Start/End: Original strand, 24588570 - 24588673
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||| |||||||||||||||  |||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||    
T  24588570 caaaggttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctatgttt 24588669  T
Q  361 ttcc 364  Q
    ||||    
T  24588670 ttcc 24588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 15704262 - 15704416
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||||||||||||| || |||| ||||| |||||||||| ||||||||||||    
T  15704262 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgc 15704361  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| | ||||||||||||||||| ||||||||||| ||||| ||||    
T  15704362 attctacacaccgagattcacagttgatgcttcctgtgtttttcttctcttctcc 15704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 31477096 - 31477209
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| || ||    
T  31477096 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccaaaattcacagttgatgctttctttgctt 31477195  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  31477196 ttcttctcttctcc 31477209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 16625131 - 16625005
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| |||||||||||||||    
T  16625131 aattacttgttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16625032  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||| ||||| ||||    
T  16625031 gcttcctgtgcttttcttctcttctcc 16625005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 19772404 - 19772517
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||  |||| ||    
T  19772404 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcatgtgctt 19772503  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  19772504 ttcttctcttctcc 19772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 27324453 - 27324564
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||  ||| ||| ||||||| ||||||||||||||||||| ||||||||    
T  27324453 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacac--tgcattctacacaccgaaattcacagttgatgcttcctgtgttt 27324550  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  27324551 ttcttctcttctcc 27324564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 22807053 - 22806940
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    |||||||||||| |||||||| || |||| ||||| ||||||| || |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  22807053 caaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 22806954  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  22806953 ttcttctcttctcc 22806940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 261 - 369
Target Start/End: Complemental strand, 2077514 - 2077406
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||| ||||| || |||| || || |||||||||| ||| |||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  2077514 caaagtttctcactttttagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 2077415  T
Q  361 ttcctctct 369  Q
    ||| |||||    
T  2077414 ttcttctct 2077406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 16761085 - 16760971
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctc-tgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtt 359  Q
    ||||||||||||||||||||| || || | |||| | |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |    
T  16761085 caaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgct 16760986  T
Q  360 tttcctctctgctcc 374  Q
    |||| ||||| ||||    
T  16760985 tttcttctcttctcc 16760971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 6111910 - 6111983
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| | ||| |||||||    
T  6111910 gtgttttcttagtccccaagttttgctaaaaatatttcggaacgcaatctagaatattttggaacacaatctga 6111983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 22949930 - 22949821
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    |||||||||||||||||  | || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 22949831  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  22949830 tctcttctcc 22949821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 22953886 - 22953777
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    |||||||||||||||||  | || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 22953787  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  22953786 tctcttctcc 22953777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 23872374 - 23872265
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    |||||||||||||||||  | || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 23872275  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  23872274 tctcttctcc 23872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 23876330 - 23876221
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    |||||||||||||||||  | || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 23876231  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  23876230 tctcttctcc 23876221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 14073850 - 14073724
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    |||||||||  | ||||||||||||  ||||||| ||||| ||||||| ||||||||||||||| ||| ||| ||||  || || |||||||||||| ||    
T  14073850 aattatttgtccccaaagtttctcatctattagttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagttcat 14073751  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | ||  |||| ||||||||||| ||||    
T  14073750 gattcttgtgcttttcctctcttctcc 14073724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 18387634 - 18387521
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||||| | ||||| ||||| | ||||||||||||||||||| ||| ||    || |||||| |||||||||||| || ||||| ||    
T  18387634 caaagtttctcacctattaattgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatgattcctgtgctt 18387535  T
Q  361 ttcctctctgctcc 374  Q
    ||||||||| ||||    
T  18387534 ttcctctcttctcc 18387521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 26981297 - 26981184
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||||||| ||||| ||||| | ||||||||||||||||||  ||| |||   || || |||| |||||||||||||| ||||| ||    
T  26981297 caaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgcttcctgtgctt 26981198  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  26981197 ttcttctcttctcc 26981184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 331
Target Start/End: Original strand, 2862824 - 2862934
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgct 320  Q
    |||||||| ||||||||||||||||  ||||| ||| || ||||||| | ||| || || | ||||| ||||||| ||||||||||||||||| ||| |     
T  2862824 atatttttatactagatctaatatgtgaattacttgttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttca 2862923  T
Q  321 ttccacacacc 331  Q
    ||||| |||||    
T  2862924 ttccatacacc 2862934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 27073700 - 27073574
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||| | ||||||||||||||||||  ||| |||   || || |||| ||||||||||    
T  27073700 aattacttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgat 27073601  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||| ||||| ||||    
T  27073600 gtttcctgtgcttttcttctcttctcc 27073574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 17963991 - 17964040
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  17963991 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 17964040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 313
Target Start/End: Original strand, 2759769 - 2759820
Alignment:
Q  262 aaagtttctcacttattagtagtgaactttctctgtaaatagagagctcaca 313  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||||||||||    
T  2759769 aaagtttcttacttattagttgtgaattttctctgtaaacagagagctcaca 2759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 2862685 - 2862743
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||| ||||||||||||||| |||||| ||||||||||| |||||||||    
T  2862685 gtgttttcttagtcctcaagttttgctaaaa-tattttagaacgcaatctgaaatatttt 2862743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 28964174 - 28964233
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttatta 279  Q
    |||||||||||||||||||||||||   ||||||||| || ||||||||||||| |||||    
T  28964174 gatatttttgtactagatctaatatttgaattatttgttcccaaagtttctcacatatta 28964233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 15991087 - 15991160
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||||||||||||| ||||| |||||||  ||||||||| | |  | ||||| ||||||||||||||    
T  15991087 caaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacaccaaa 15991160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 15641229 - 15641171
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| | ||||||||||||||| |||||||||||||||| ||| | |||||||||    
T  15641229 gtgttttcttactccccaagttttgct-aaaatattttggaacgtaatatgaaatatttt 15641171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 2881998 - 2882046
Alignment:
Q  90 agtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||| ||||||||||||||| |||||| ||||||||||| |||||||||    
T  2881998 agtcctcaagttttgctaaaa-tattttagaacgcaatctgaaatatttt 2882046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 59169 - 59015
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||    
T  59169 gatatttttgtactagatctaatatgagaattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgc 59070  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||||| ||||| ||||||| | ||||||||| ||||| ||||||||||| ||||    
T  59069 tttccatacaccgaaattcataattgatgcttcctgtgcttttcctctcttctcc 59015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 63371 - 63284
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagag 307  Q
    ||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  63371 gatatttttgtactagatctaatatgagaattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagag 63284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 59350 - 59291
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  59350 gtgttttcttagtccccaagttttgctgaaaatattttggaacgcaatctagaatatttt 59291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 63552 - 63493
Alignment:
Q  80 gtgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  63552 gtgttttcttagtccccaagttttgctgaaaatattttggaacgcaatctagaatatttt 63493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 59298 - 59255
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  59298 aatattttggaacgcaatctaaattattttagtacatgatctga 59255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 63500 - 63457
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  63500 aatattttggaacgcaatctaaattattttagtacatgatctga 63457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 591 - 745
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||  ||||||||||||  | ||||||||||||||||||||    
T  591 gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttatgaactttctctacatatagagagctcacacagtgc 690  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    |||| | ||||| ||||||||||||||||||| ||||  ||||||||||| ||||    
T  691 tttcaatacaccgaaattcacagttgatgcttcctgtacttttcctctcttctcc 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 411 - 469
Alignment:
Q  81 tgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  411 tgttttcttagtccctaagttttgctaaaaatattttggaacgcaatatagaatatttt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 462 - 505
Alignment:
Q  110 aatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  462 aatattttggaatgcaatctaaaatattttagtacatgatctga 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 12360 - 12473
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||| ||    
T  12360 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgctttctgtgatt 12459  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  12460 ttcttctcttctcc 12473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 5232 - 5386
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  |||||||||||||||||   |||| ||| | |||||||||||||||||||||| || |||| || || |||||||||| ||||||||||||    
T  5232 gatatttaagtactagatctaatatgtgcattacttgttttcaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgc 5331  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     | | ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  5332 atcctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 127105 - 126992
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  127105 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 127006  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  127005 ttcttctcttctcc 126992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 71834 - 71738
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaa-ttcacagttgatgctttctgt 356  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  71834 caaagtttctcacttattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgatgcttcctgt 71738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 22050 - 21896
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||||||||| ||| || |||| ||||| |||||||||| ||||||||||||    
T  22050 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgc 21951  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||  ||||||||||||||||||| ||||||||||| ||||| ||||    
T  21950 attctacacactgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 21896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 10368 - 10481
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  10368 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10467  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  10468 ttcttctcttctcc 10481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 14869 - 14982
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||  |||| ||    
T  14869 caaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcttgtgctt 14968  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  14969 ttcttctcttctcc 14982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 30969 - 30856
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| ||| | ||||| ||||||||||||||||||| || || ||    
T  30969 caaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatgcttcctatgctt 30870  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  30869 ttcttctcttctcc 30856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 7131 - 6977
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  |||||||||| |||||||||| || |||| ||||| |||||||||| ||||||||||||    
T  7131 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgc 7032  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| ||||||| |||||||||||  |||| ||||||||||| ||||    
T  7031 attctacacaccgaaattcatagttgatgcttcatgtgcttttcctctcttctcc 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 7357 - 7309
Alignment:
Q  90 agtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||| |||||||||| |||||||||| |||||||| ||||||||    
T  7357 agtccccaagctttgctaaaa-tattttggaaggcaatctagaatatttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 24675 - 24801
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| |||   || || |||||||||||||||    
T  24675 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgat 24774  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    | || ||||| ||||||||||| ||||    
T  24775 gattcctgtgcttttcctctcttctcc 24801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 121309 - 121155
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  ||||||||||||||| |   |||| ||| |  ||||||||||||||||||||| || || | ||||| |||||||||| ||||||||||||    
T  121309 gatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgc 121210  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||| ||||||||||||||||||| || || ||||| ||||| ||||    
T  121209 attctacacaccgaaattcacagttgatgcttcctatgcttttcttctcttctcc 121155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 30399 - 30273
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||| ||| |||| || |||||||||||||||    
T  30399 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttgat 30300  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| || || ||||| ||||| ||||    
T  30299 gcttcctatgcttttcttctcttctcc 30273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 193646 - 193772
Alignment:
Q  248 aattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||| ||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||||||| ||| |||   ||||| |||||||||||||||    
T  193646 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttgat 193745  T
Q  348 gctttctgtgtttttcctctctgctcc 374  Q
    |||| ||||| ||||||||||| ||||    
T  193746 gcttcctgtgcttttcctctcttctcc 193772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 187973 - 188086
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||| ||| ||||| ||||||| |||||| || | ||||||| ||| |||   || || |||| |||||||||||||| ||||| ||    
T  187973 caaagtttctcacctatcagttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatgcttcctgtgctt 188072  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  188073 ttcttctcttctcc 188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 192764 - 192811
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  192764 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 568 - 455
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||| |||   | ||| ||||||||||||||||||| ||||||||    
T  568 caaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatgcttcctgtgttt 469  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  468 ttcttctcttctcc 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 10818 - 10931
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  10818 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 10917  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  10918 ttcttctcttctcc 10931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 31977 - 32090
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  31977 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 32076  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  32077 ttcttctcttctcc 32090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 7579 - 7478
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||    
T  7579 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 7480  T
Q  361 tt 362  Q
    ||    
T  7479 tt 7478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 13404 - 13517
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  13404 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 13503  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  13504 ttcttctcttctcc 13517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 21378 - 21491
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  21378 caaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 21477  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  21478 ttcttctcttctcc 21491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 35403 - 35516
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||||||||||| || |||  ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| ||    
T  35403 caaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 35502  T
Q  361 ttcctctctgctcc 374  Q
    ||| ||||| ||||    
T  35503 ttcttctcttctcc 35516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 3740 - 3852
Alignment:
Q  262 aaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttt 361  Q
    |||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||| |||   || || ||||||||||||||||||| ||||| |||    
T  3740 aaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatgcttcctgtgcttt 3839  T
Q  362 tcctctctgctcc 374  Q
    |||||||| ||||    
T  3840 tcctctcttctcc 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 19615 - 19727
Alignment:
Q  262 aaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttt 361  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| |||   || || ||||||||||||||||||| ||||| |||    
T  19615 aaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtgcttt 19714  T
Q  362 tcctctctgctcc 374  Q
    | |||||| ||||    
T  19715 ttctctcttctcc 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 8754 - 8804
Alignment:
Q  99 gttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatc 150  Q
    |||||||||||| |||||| ||||||||||||||||||||| | ||||||||    
T  8754 gttttgctaaaa-tattttagaacgcaatctaaaatattttggaacataatc 8804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 1186 - 1077
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||| |||||     
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 1087  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  1086 tctcttctcc 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 54; Significance: 6e-22; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 81260 - 81147
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||||||| | ||| ||||||| ||||||||| ||||||||| ||| ||| |||| || |||||||||||||||| || ||||| ||    
T  81260 caaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatgattcctgtgctt 81161  T
Q  361 ttcctctctgctcc 374  Q
    ||||||||| ||||    
T  81160 ttcctctcttctcc 81147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 64862 - 64749
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgttt 360  Q
    ||||||||||||| ||||||| | ||| ||||||| ||||||||| ||||||||| ||| | | |||| || |||||||||||||||| ||  |||| ||    
T  64862 caaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatgattcatgtgctt 64763  T
Q  361 ttcctctctgctcc 374  Q
    ||||||||| ||||    
T  64762 ttcctctcttctcc 64749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 65367 - 65320
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  65367 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 65320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 81615 - 81568
Alignment:
Q  91 gtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  81615 gtccccaagttttgctaaat-tattttagaacgcaatctagaatatttt 81568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 7910 - 7756
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    |||||||  |||||| |||||||| |   |||||||| |  ||||||||||| ||||||||| || |||| ||||| |||||||||| ||||||||||||    
T  7910 gatatttaagtactaaatctaataggtgcattatttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgc 7811  T
Q  320 tttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
     ||| ||||||  ||||||||| || |||||| ||||| ||||| ||||| ||||    
T  7810 attctacacacagaaattcacaatttatgcttcctgtgattttcttctcttctcc 7756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 8330 - 8219
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgc 319  Q
    ||||||||||||||||||||||||||  ||||| ||| || ||||||||||||| |||||||  |||  ||||||| |||||||  || ||||  ||| |    
T  8330 gatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacctagttc 8231  T
Q  320 tttccacacacc 331  Q
     |||||||||||    
T  8230 attccacacacc 8219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 2951 - 2891
Alignment:
Q  221 atatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagt 281  Q
    |||||||||||||||||||||||||  ||||| ||| || ||||||||||||| |||||||    
T  2951 atatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacatattagt 2891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 199888 - 199781
Alignment:
Q  265 gtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcc 364  Q
    ||||||||| ||||||| | ||| ||||||| ||||||||||||||||||| ||| |||     ||| |||||||||||||||| || ||||| ||||||    
T  199888 gtttctcacctattagttgcgaagtttctctataaatagagagctcacacaatgcattc--tggaccgaaattcacagttgatgattcctgtgcttttcc 199791  T
Q  365 tctctgctcc 374  Q
    ||||| ||||    
T  199790 tctcttctcc 199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 22956 - 23024
Alignment:
Q  84 tttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||| |||||||||||| || |||||||    
T  22956 tttcttagtccccaagttttactaaaa-tattttagaacgcaatctgaaatattttagtgcacaatctga 23024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 256514 - 256441
Alignment:
Q  261 caaagtttctcacttattagtagtgaactttctctgtaaatagagagctcacacagtgctttccacacaccaaa 334  Q
    ||||||||||||||||||||| |||||  |||||| ||||||||||  ||||| ||||| || |||||||||||    
T  256514 caaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacaccaaa 256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 5902 - 5985
Alignment:
Q  220 gatatttttgtactagatctaatatgaaaattatttgctctcaaagtttctcacttattagtagtgaactttctctgtaaatag 303  Q
    ||||||||||||||||||||||||||  ||||| ||| ||  |||||||||||| ||||||| |||   ||||||| |||||||    
T  5902 gatatttttgtactagatctaatatgtgaattacttgttccgaaagtttctcacatattagttgtgctttttctctataaatag 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 22337 - 22264
Alignment:
Q  301 tagagagctcacacagtgctttccacacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||||||||||| ||| |||   || || ||||||||||||||||||| ||||| ||||||||||| ||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtggttttcctctcttctcc 22264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 22372 - 22325
Alignment:
Q  300 atagagagctcacacagtgctttccacacaccaaaattcacagttgat 347  Q
    ||||||| |||||||||||| ||| ||||||| |||||||||||||||    
T  22372 atagagaactcacacagtgcattctacacaccgaaattcacagttgat 22325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 8511 - 8454
Alignment:
Q  81 tgttttctaagtccccaagttttgctaaaaatattttggaacgcaatctaaaatatttt 139  Q
    |||||||| ||||||||||||||||| |||||| |||| ||| |||||| |||||||||    
T  8511 tgttttcttagtccccaagttttgct-aaaatagtttgaaacacaatctgaaatatttt 8454  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 11832 - 11783
Alignment:
Q  325 acacaccaaaattcacagttgatgctttctgtgtttttcctctctgctcc 374  Q
    ||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||    
T  11832 acacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 11783  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 83796 - 83752
Alignment:
Q  109 aaatattttggaacgcaatctaaaatattttagtacataatctga 153  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||    
T  83796 aaatattttggtaggcaatctaatatattttagtacatgatctga 83752  T

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