View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3517_low_2 (Length: 705)

Name: NF3517_low_2
Description: NF3517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3517_low_2
NF3517_low_2
[»] chr8 (55 HSPs)
chr8 (12-109)||(17695685-17695782)
chr8 (182-235)||(14329527-14329580)
chr8 (186-234)||(8388198-8388246)
chr8 (185-236)||(25601794-25601845)
chr8 (110-180)||(12330322-12330391)
chr8 (419-506)||(17694756-17694844)
chr8 (182-236)||(34019051-34019104)
chr8 (186-235)||(7988950-7988999)
chr8 (364-397)||(27164683-27164716)
chr8 (363-395)||(960521-960553)
chr8 (186-234)||(8307944-8307992)
chr8 (363-395)||(12330334-12330366)
chr8 (363-395)||(14329624-14329656)
chr8 (363-395)||(25277730-25277762)
chr8 (363-395)||(27543649-27543681)
chr8 (363-395)||(29309566-29309598)
chr8 (186-234)||(33641060-33641108)
chr8 (363-395)||(34985346-34985378)
chr8 (186-234)||(43945328-43945376)
chr8 (188-235)||(4105208-4105254)
chr8 (439-478)||(8060022-8060061)
chr8 (188-235)||(38500440-38500487)
chr8 (363-398)||(40411423-40411458)
chr8 (363-394)||(40652621-40652652)
chr8 (363-393)||(8388117-8388147)
chr8 (186-236)||(27198301-27198351)
chr8 (365-395)||(27987552-27987582)
chr8 (365-395)||(28044854-28044884)
chr8 (366-395)||(1600078-1600107)
chr8 (180-236)||(12330494-12330548)
chr8 (421-466)||(12398015-12398060)
chr8 (199-236)||(17812112-17812149)
chr8 (195-236)||(27543550-27543591)
chr8 (366-395)||(43400672-43400701)
chr8 (366-395)||(43945170-43945199)
chr8 (186-234)||(960352-960399)
chr8 (363-395)||(2270315-2270347)
chr8 (363-395)||(3912504-3912536)
chr8 (188-236)||(4105131-4105178)
chr8 (363-395)||(9513829-9513861)
chr8 (186-234)||(12330414-12330461)
chr8 (195-235)||(25277564-25277604)
chr8 (186-234)||(25601876-25601924)
chr8 (363-395)||(25601971-25602003)
chr8 (363-395)||(27198145-27198177)
chr8 (195-235)||(27198235-27198275)
chr8 (195-235)||(27543483-27543523)
chr8 (363-395)||(27987298-27987330)
chr8 (363-395)||(28044600-28044632)
chr8 (363-395)||(29309798-29309830)
chr8 (186-234)||(29726185-29726233)
chr8 (363-395)||(40702034-40702066)
chr8 (195-235)||(41565363-41565403)
chr8 (186-234)||(43121160-43121208)
chr8 (442-505)||(44328548-44328612)
[»] chr2 (68 HSPs)
chr2 (186-236)||(17328251-17328301)
chr2 (421-478)||(38606831-38606888)
chr2 (185-236)||(22535609-22535660)
chr2 (186-236)||(37147711-37147761)
chr2 (186-236)||(38386088-38386138)
chr2 (186-235)||(3364488-3364537)
chr2 (364-403)||(38937533-38937572)
chr2 (182-236)||(9011910-9011964)
chr2 (186-236)||(28149515-28149565)
chr2 (186-236)||(28484518-28484568)
chr2 (363-397)||(38385934-38385968)
chr2 (186-236)||(39227953-39228003)
chr2 (186-235)||(16577196-16577245)
chr2 (364-397)||(16670498-16670531)
chr2 (186-235)||(17328173-17328222)
chr2 (186-235)||(28484440-28484489)
chr2 (135-180)||(34831809-34831854)
chr2 (182-235)||(37147628-37147681)
chr2 (363-395)||(16577371-16577403)
chr2 (363-395)||(17328093-17328125)
chr2 (363-395)||(19493472-19493504)
chr2 (363-395)||(19641447-19641479)
chr2 (363-395)||(19840040-19840072)
chr2 (442-478)||(21620658-21620694)
chr2 (363-395)||(22116156-22116188)
chr2 (188-236)||(25227908-25227956)
chr2 (127-179)||(27010188-27010239)
chr2 (183-235)||(28149594-28149645)
chr2 (186-234)||(29098177-29098225)
chr2 (363-395)||(29835103-29835135)
chr2 (366-398)||(34428635-34428667)
chr2 (363-395)||(34635707-34635739)
chr2 (363-395)||(37147552-37147584)
chr2 (363-395)||(38210865-38210897)
chr2 (188-235)||(22535535-22535581)
chr2 (364-395)||(23835797-23835828)
chr2 (363-394)||(30371620-30371651)
chr2 (363-394)||(43301882-43301913)
chr2 (186-236)||(1498967-1499016)
chr2 (194-236)||(3364415-3364457)
chr2 (509-539)||(21620777-21620807)
chr2 (136-170)||(23381177-23381211)
chr2 (366-395)||(3364588-3364617)
chr2 (194-235)||(12693664-12693705)
chr2 (195-236)||(18555668-18555709)
chr2 (363-396)||(18701551-18701584)
chr2 (366-395)||(19052200-19052229)
chr2 (186-235)||(25227985-25228034)
chr2 (186-235)||(25926965-25927013)
chr2 (195-236)||(34635867-34635908)
chr2 (366-407)||(38877048-38877089)
chr2 (186-235)||(39227875-39227923)
chr2 (363-395)||(12028199-12028231)
chr2 (195-235)||(18701642-18701682)
chr2 (188-236)||(19052098-19052146)
chr2 (366-398)||(19493274-19493306)
chr2 (363-403)||(20182257-20182297)
chr2 (200-236)||(20182418-20182454)
chr2 (363-395)||(20182518-20182550)
chr2 (126-178)||(21302264-21302316)
chr2 (363-395)||(22535455-22535487)
chr2 (363-395)||(22535707-22535739)
chr2 (363-395)||(23260321-23260353)
chr2 (120-176)||(25927124-25927180)
chr2 (363-395)||(28149690-28149722)
chr2 (363-395)||(30371386-30371418)
chr2 (135-179)||(31260950-31260994)
chr2 (363-395)||(33641133-33641165)
[»] chr1 (70 HSPs)
chr1 (126-235)||(15336379-15336486)
chr1 (439-505)||(19234889-19234956)
chr1 (186-236)||(31532416-31532466)
chr1 (182-235)||(7112571-7112624)
chr1 (182-235)||(30434407-30434459)
chr1 (186-236)||(4646839-4646889)
chr1 (186-236)||(5330580-5330630)
chr1 (186-236)||(5348295-5348345)
chr1 (186-232)||(6540800-6540846)
chr1 (186-236)||(28411073-28411123)
chr1 (194-236)||(51904068-51904110)
chr1 (363-400)||(24987604-24987641)
chr1 (186-235)||(27794439-27794488)
chr1 (186-235)||(28724456-28724505)
chr1 (186-235)||(29018523-29018572)
chr1 (363-400)||(32131927-32131964)
chr1 (363-395)||(2472608-2472640)
chr1 (366-398)||(7112748-7112780)
chr1 (363-395)||(9439426-9439458)
chr1 (363-395)||(10028001-10028033)
chr1 (363-395)||(18458826-18458858)
chr1 (120-180)||(24963002-24963062)
chr1 (363-395)||(25235775-25235807)
chr1 (363-395)||(26095815-26095847)
chr1 (363-395)||(26097051-26097083)
chr1 (363-395)||(47022093-47022125)
chr1 (442-505)||(49497046-49497110)
chr1 (363-394)||(1825296-1825327)
chr1 (186-237)||(9043600-9043650)
chr1 (439-505)||(9424602-9424669)
chr1 (364-395)||(14625371-14625402)
chr1 (363-394)||(21853418-21853449)
chr1 (364-395)||(43635836-43635867)
chr1 (126-169)||(50596168-50596211)
chr1 (363-393)||(2059450-2059480)
chr1 (364-394)||(2273503-2273533)
chr1 (186-236)||(7112648-7112698)
chr1 (186-236)||(13154661-13154710)
chr1 (363-393)||(15336378-15336408)
chr1 (186-235)||(16698951-16699001)
chr1 (186-236)||(27794519-27794569)
chr1 (186-236)||(28724377-28724427)
chr1 (197-235)||(34360118-34360156)
chr1 (186-232)||(36343237-36343283)
chr1 (186-236)||(36343312-36343362)
chr1 (198-236)||(42847606-42847644)
chr1 (186-235)||(5330501-5330550)
chr1 (366-395)||(7112495-7112524)
chr1 (366-395)||(8928816-8928845)
chr1 (366-395)||(13545580-13545609)
chr1 (366-395)||(30659435-30659464)
chr1 (195-236)||(33573804-33573845)
chr1 (366-395)||(51470130-51470159)
chr1 (186-230)||(2059275-2059319)
chr1 (186-234)||(2059355-2059402)
chr1 (363-395)||(2472391-2472423)
chr1 (363-395)||(5348164-5348196)
chr1 (363-395)||(13903395-13903427)
chr1 (186-234)||(16699033-16699080)
chr1 (195-235)||(18458731-18458771)
chr1 (363-395)||(22604686-22604718)
chr1 (363-395)||(28410915-28410947)
chr1 (363-395)||(28724326-28724358)
chr1 (363-395)||(30434281-30434313)
chr1 (363-395)||(35034319-35034351)
chr1 (442-505)||(42489192-42489256)
chr1 (363-395)||(42736845-42736877)
chr1 (363-395)||(46136087-46136119)
chr1 (185-235)||(47021998-47022045)
chr1 (363-395)||(50596182-50596214)
[»] chr3 (56 HSPs)
chr3 (186-236)||(51252209-51252259)
chr3 (182-235)||(3548282-3548335)
chr3 (123-180)||(12767166-12767222)
chr3 (186-235)||(29313867-29313916)
chr3 (182-235)||(49872876-49872929)
chr3 (182-234)||(8355494-8355546)
chr3 (188-236)||(43767818-43767866)
chr3 (182-234)||(51252126-51252178)
chr3 (187-236)||(3548204-3548253)
chr3 (186-235)||(22949328-22949377)
chr3 (195-236)||(25323833-25323874)
chr3 (182-231)||(27432750-27432799)
chr3 (186-235)||(30271625-30271674)
chr3 (363-395)||(6510216-6510248)
chr3 (183-235)||(27760449-27760500)
chr3 (186-234)||(29313942-29313990)
chr3 (363-395)||(47115586-47115618)
chr3 (363-395)||(49872973-49873005)
chr3 (363-395)||(49880761-49880793)
chr3 (363-395)||(51460787-51460819)
chr3 (186-234)||(53806725-53806773)
chr3 (363-395)||(54567767-54567799)
chr3 (364-395)||(10615276-10615307)
chr3 (363-394)||(22949248-22949279)
chr3 (364-395)||(37977531-37977562)
chr3 (364-395)||(46597533-46597564)
chr3 (364-395)||(46610010-46610041)
chr3 (197-235)||(3072575-3072613)
chr3 (186-236)||(5416142-5416191)
chr3 (186-236)||(7584328-7584377)
chr3 (363-393)||(8827449-8827479)
chr3 (186-236)||(12767094-12767143)
chr3 (365-395)||(20957195-20957225)
chr3 (186-236)||(30271704-30271754)
chr3 (186-236)||(30586245-30586295)
chr3 (186-236)||(36867717-36867767)
chr3 (186-235)||(5417194-5417243)
chr3 (366-395)||(27497800-27497829)
chr3 (186-235)||(30586324-30586373)
chr3 (186-235)||(43767741-43767789)
chr3 (195-236)||(49880594-49880635)
chr3 (195-235)||(5205208-5205248)
chr3 (195-235)||(5205280-5205320)
chr3 (363-395)||(14241215-14241247)
chr3 (363-395)||(18140941-18140973)
chr3 (363-395)||(18142221-18142253)
chr3 (186-234)||(19623938-19623986)
chr3 (196-236)||(20957039-20957079)
chr3 (187-235)||(25109989-25110037)
chr3 (363-395)||(25110085-25110117)
chr3 (195-235)||(27521613-27521653)
chr3 (363-395)||(27760290-27760322)
chr3 (363-395)||(29313789-29313821)
chr3 (364-400)||(48044270-48044306)
chr3 (363-395)||(51252050-51252082)
chr3 (363-395)||(53806820-53806852)
[»] chr5 (41 HSPs)
chr5 (182-235)||(711316-711369)
chr5 (186-235)||(9226931-9226980)
chr5 (187-236)||(12382908-12382957)
chr5 (364-408)||(15061848-15061892)
chr5 (184-234)||(12330933-12330983)
chr5 (186-236)||(33483051-33483101)
chr5 (186-235)||(20688876-20688925)
chr5 (182-235)||(26035010-26035062)
chr5 (186-235)||(31861572-31861621)
chr5 (363-395)||(10976771-10976803)
chr5 (363-395)||(12399610-12399642)
chr5 (363-395)||(22551523-22551555)
chr5 (363-395)||(29104445-29104477)
chr5 (363-395)||(38482319-38482351)
chr5 (364-395)||(15615104-15615135)
chr5 (447-505)||(22874287-22874346)
chr5 (196-235)||(26213417-26213456)
chr5 (363-393)||(20689052-20689082)
chr5 (186-236)||(31861652-31861702)
chr5 (186-236)||(39153550-39153600)
chr5 (186-236)||(40339412-40339461)
chr5 (186-236)||(41797663-41797713)
chr5 (186-236)||(42119216-42119265)
chr5 (195-236)||(5718317-5718358)
chr5 (186-235)||(21149027-21149076)
chr5 (195-236)||(26034938-26034979)
chr5 (186-235)||(36354711-36354760)
chr5 (413-505)||(38869863-38869955)
chr5 (186-235)||(39153469-39153518)
chr5 (363-395)||(2870908-2870940)
chr5 (198-234)||(5747411-5747447)
chr5 (363-398)||(9227108-9227144)
chr5 (195-235)||(10976674-10976714)
chr5 (363-395)||(28819537-28819569)
chr5 (363-395)||(31861492-31861524)
chr5 (363-395)||(33052818-33052850)
chr5 (363-398)||(33658868-33658904)
chr5 (195-235)||(33658962-33659002)
chr5 (363-395)||(36993007-36993039)
chr5 (120-180)||(38482316-38482376)
chr5 (188-236)||(39418878-39418925)
[»] chr4 (51 HSPs)
chr4 (182-235)||(18454271-18454324)
chr4 (186-235)||(51965451-51965500)
chr4 (185-235)||(45900712-45900762)
chr4 (439-472)||(39414503-39414536)
chr4 (186-235)||(39868549-39868597)
chr4 (363-395)||(550674-550706)
chr4 (363-395)||(11563541-11563573)
chr4 (363-395)||(20125442-20125474)
chr4 (363-395)||(21780123-21780155)
chr4 (180-236)||(21798408-21798463)
chr4 (363-395)||(24215765-24215797)
chr4 (363-395)||(37273419-37273451)
chr4 (363-395)||(50138489-50138521)
chr4 (180-235)||(1386165-1386220)
chr4 (182-233)||(13334901-13334951)
chr4 (364-395)||(21994328-21994359)
chr4 (363-394)||(27579516-27579547)
chr4 (364-395)||(29248243-29248274)
chr4 (364-395)||(50881447-50881478)
chr4 (364-395)||(54554384-54554415)
chr4 (186-236)||(9791571-9791620)
chr4 (194-236)||(16482144-16482186)
chr4 (186-236)||(17289902-17289952)
chr4 (134-180)||(30966848-30966894)
chr4 (186-236)||(43751206-43751255)
chr4 (440-505)||(54933183-54933249)
chr4 (186-235)||(8920458-8920506)
chr4 (186-235)||(16493648-16493697)
chr4 (363-396)||(17290000-17290033)
chr4 (186-235)||(43751127-43751175)
chr4 (186-235)||(47321066-47321114)
chr4 (182-235)||(53231851-53231904)
chr4 (186-235)||(56467495-56467543)
chr4 (195-235)||(5401853-5401893)
chr4 (194-234)||(11563381-11563421)
chr4 (363-395)||(16493519-16493551)
chr4 (363-395)||(21798589-21798621)
chr4 (363-395)||(22272931-22272963)
chr4 (117-181)||(24215739-24215803)
chr4 (442-505)||(30666925-30666989)
chr4 (198-234)||(31881015-31881051)
chr4 (363-395)||(34027218-34027250)
chr4 (363-395)||(35539804-35539836)
chr4 (363-395)||(38656079-38656111)
chr4 (182-234)||(44519622-44519673)
chr4 (363-395)||(46094264-46094296)
chr4 (363-395)||(50727591-50727623)
chr4 (363-395)||(50735605-50735637)
chr4 (363-395)||(51965373-51965405)
chr4 (195-235)||(55363849-55363889)
chr4 (186-234)||(56467576-56467623)
[»] chr7 (68 HSPs)
chr7 (181-237)||(19410587-19410643)
chr7 (186-236)||(24205277-24205327)
chr7 (186-236)||(24206795-24206845)
chr7 (182-236)||(24555782-24555835)
chr7 (186-235)||(1693299-1693348)
chr7 (186-235)||(31186750-31186799)
chr7 (186-235)||(38193042-38193091)
chr7 (182-235)||(45163990-45164043)
chr7 (363-395)||(1594148-1594180)
chr7 (363-395)||(6269529-6269561)
chr7 (363-395)||(9915652-9915684)
chr7 (363-395)||(9923564-9923596)
chr7 (363-395)||(13279441-13279473)
chr7 (363-395)||(13797635-13797667)
chr7 (186-234)||(15037309-15037357)
chr7 (363-395)||(19272473-19272505)
chr7 (366-406)||(21298004-21298044)
chr7 (363-395)||(23371450-23371482)
chr7 (363-395)||(23784585-23784617)
chr7 (363-395)||(38193218-38193250)
chr7 (363-395)||(39580190-39580222)
chr7 (442-505)||(39927727-39927791)
chr7 (364-395)||(9553401-9553432)
chr7 (363-406)||(14554472-14554515)
chr7 (180-235)||(23371608-23371662)
chr7 (365-408)||(35913310-35913353)
chr7 (363-398)||(44568846-44568881)
chr7 (363-398)||(45163911-45163946)
chr7 (182-236)||(4518026-4518080)
chr7 (126-180)||(5909717-5909771)
chr7 (186-236)||(13279266-13279316)
chr7 (186-232)||(13279347-13279393)
chr7 (186-236)||(13286790-13286840)
chr7 (186-236)||(31186830-31186880)
chr7 (186-236)||(38193121-38193170)
chr7 (363-393)||(39065386-39065416)
chr7 (366-395)||(19979652-19979681)
chr7 (186-235)||(19979731-19979779)
chr7 (120-180)||(24555702-24555763)
chr7 (363-400)||(24555925-24555962)
chr7 (445-505)||(26776153-26776214)
chr7 (144-177)||(27241749-27241782)
chr7 (182-235)||(35913127-35913180)
chr7 (186-235)||(43251591-43251639)
chr7 (180-236)||(1693379-1693434)
chr7 (363-395)||(3307700-3307732)
chr7 (363-395)||(5766639-5766671)
chr7 (363-395)||(5909714-5909746)
chr7 (364-392)||(8174888-8174916)
chr7 (363-395)||(10688459-10688491)
chr7 (363-395)||(10980620-10980652)
chr7 (363-395)||(13882604-13882636)
chr7 (188-236)||(19272376-19272424)
chr7 (113-180)||(19410500-19410568)
chr7 (195-235)||(20040991-20041031)
chr7 (121-181)||(24555900-24555959)
chr7 (363-395)||(24845639-24845671)
chr7 (363-395)||(26050176-26050208)
chr7 (363-395)||(26050427-26050459)
chr7 (363-395)||(26059535-26059567)
chr7 (363-395)||(26059786-26059818)
chr7 (144-180)||(29002411-29002447)
chr7 (363-395)||(31186669-31186701)
chr7 (363-395)||(33757411-33757443)
chr7 (188-236)||(35913209-35913257)
chr7 (363-395)||(42202162-42202194)
chr7 (188-236)||(48104585-48104632)
chr7 (363-395)||(48104752-48104784)
[»] scaffold0740 (1 HSPs)
scaffold0740 (188-235)||(3729-3776)
[»] chr6 (40 HSPs)
chr6 (186-233)||(3593421-3593468)
chr6 (179-234)||(12321023-12321078)
chr6 (186-236)||(24062322-24062372)
chr6 (186-236)||(33561884-33561934)
chr6 (198-235)||(24325606-24325643)
chr6 (363-395)||(3063507-3063539)
chr6 (182-234)||(5953239-5953291)
chr6 (363-395)||(10344051-10344083)
chr6 (363-395)||(13114399-13114431)
chr6 (363-395)||(14328670-14328702)
chr6 (363-395)||(14421680-14421712)
chr6 (363-395)||(24387785-24387817)
chr6 (363-395)||(29942467-29942499)
chr6 (364-395)||(56137-56168)
chr6 (442-488)||(5605351-5605398)
chr6 (180-235)||(13639584-13639639)
chr6 (197-236)||(24325668-24325707)
chr6 (446-505)||(29383932-29383991)
chr6 (363-398)||(30381564-30381599)
chr6 (186-236)||(1319196-1319245)
chr6 (186-236)||(9286283-9286333)
chr6 (126-168)||(12321192-12321234)
chr6 (186-236)||(13357513-13357563)
chr6 (129-179)||(13639516-13639566)
chr6 (365-395)||(22574056-22574086)
chr6 (363-397)||(34715928-34715962)
chr6 (194-235)||(13357444-13357485)
chr6 (183-236)||(29942372-29942425)
chr6 (198-235)||(30381723-30381760)
chr6 (363-395)||(7922318-7922350)
chr6 (186-234)||(12321109-12321157)
chr6 (366-394)||(13114652-13114680)
chr6 (363-395)||(13639510-13639542)
chr6 (363-395)||(22366242-22366274)
chr6 (363-395)||(22573803-22573835)
chr6 (363-395)||(23270233-23270265)
chr6 (126-170)||(23582343-23582386)
chr6 (363-395)||(24062168-24062200)
chr6 (363-395)||(31851759-31851791)
chr6 (121-181)||(34762181-34762241)
[»] scaffold0809 (3 HSPs)
scaffold0809 (186-236)||(3847-3897)
scaffold0809 (365-396)||(4023-4054)
scaffold0809 (186-235)||(3926-3974)
[»] scaffold0450 (4 HSPs)
scaffold0450 (186-235)||(8022-8071)
scaffold0450 (366-395)||(7860-7889)
scaffold0450 (188-236)||(7944-7992)
scaffold0450 (363-395)||(8119-8151)
[»] scaffold0769 (2 HSPs)
scaffold0769 (363-395)||(4175-4207)
scaffold0769 (195-236)||(4006-4047)
[»] scaffold0384 (3 HSPs)
scaffold0384 (363-395)||(4451-4483)
scaffold0384 (186-235)||(4357-4406)
scaffold0384 (363-395)||(4250-4282)
[»] scaffold0142 (1 HSPs)
scaffold0142 (363-395)||(34850-34882)
[»] scaffold0032 (1 HSPs)
scaffold0032 (363-395)||(91051-91083)
[»] scaffold0031 (3 HSPs)
scaffold0031 (363-395)||(1828-1860)
scaffold0031 (184-236)||(1984-2036)
scaffold0031 (182-235)||(1905-1954)
[»] scaffold0010 (2 HSPs)
scaffold0010 (363-395)||(26309-26341)
scaffold0010 (188-236)||(26461-26509)
[»] scaffold0250 (1 HSPs)
scaffold0250 (364-395)||(10081-10112)
[»] scaffold0727 (2 HSPs)
scaffold0727 (186-235)||(913-961)
scaffold0727 (120-176)||(1145-1201)
[»] scaffold0092 (1 HSPs)
scaffold0092 (366-399)||(44388-44421)
[»] scaffold0021 (1 HSPs)
scaffold0021 (198-235)||(158195-158232)
[»] scaffold0136 (1 HSPs)
scaffold0136 (363-395)||(660-692)


Alignment Details
Target: chr8 (Bit Score: 90; Significance: 4e-43; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 17695782 - 17695685
Alignment:
Q  12 catcatcacatagtaaggttacatccccacaatttcctccacttcactctgtttcattacaagtcattgttatgggacccaaatctctattccactca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17695782 catcatcacatagtaaggttacatccccacaatttcctccacttcactttgtttcattacaattcattgttatgggacccaaatctctattccactca 17695685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14329580 - 14329527
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  14329580 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 14329527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 8388198 - 8388246
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  8388198 tgtaaaatatttttgttttgatttacccctctaataggccaaacaaaaa 8388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 25601794 - 25601845
Alignment:
Q  185 ttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  25601794 ttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 25601845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 12330322 - 12330391
Alignment:
Q  110 tattattattaagggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||||||||| ||| |||||||| |||||| | |||||||||||||||||||  |||||| |||||||||    
T  12330322 tattattatta-gggttaataggtctttaccccctgtaatataggttatttctagtttttccccctgtaaa 12330391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 17694844 - 17694756
Alignment:
Q  419 gttaacttgtgccctaagtgc--ttagggcacaagttaaggaacttaaaatgaaaataaaaatatattttaacttaaaagtataactttg 506  Q
    |||||| ||||||||||||||  ||||  |||||||||||||| |||||||| ||||||||| | |  |||| |||||||||||||||||    
T  17694844 gttaacatgtgccctaagtgcctttagaacacaagttaaggaatttaaaatggaaataaaaa-aaaaattaaattaaaagtataactttg 17694756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 34019104 - 34019051
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  34019104 cccttgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 34019051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 7988999 - 7988950
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  7988999 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 7988950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 397
Target Start/End: Original strand, 27164683 - 27164716
Alignment:
Q  364 cctatattacagggggtaaagacctattaacctt 397  Q
    ||||||||||||||||||||||||||||||||||    
T  27164683 cctatattacagggggtaaagacctattaacctt 27164716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 960521 - 960553
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  960521 acctatattacagggggtaaagacctattaacc 960553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 8307944 - 8307992
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  8307944 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 8307992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 12330366 - 12330334
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  12330366 acctatattacagggggtaaagacctattaacc 12330334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 14329624 - 14329656
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  14329624 acctatattacagggggtaaagacctattaacc 14329656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 25277730 - 25277762
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  25277730 acctatattacagggggtaaagacctattaacc 25277762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 27543649 - 27543681
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  27543649 acctatattacagggggtaaagacctattaacc 27543681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 29309598 - 29309566
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  29309598 acctatattacagggggtaaagacctattaacc 29309566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 33641108 - 33641060
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| |||||||||||||| |||||| |||||||| ||||||||||    
T  33641108 tgtaaaatatttttgttttgatctacctccctaataggtcaaacaaaaa 33641060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 34985346 - 34985378
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  34985346 acctatattacagggggtaaagacctattaacc 34985378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 43945376 - 43945328
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  43945376 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 43945328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 4105254 - 4105208
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  4105254 taaaatatttttgttttgatttacctc-ctaataggccaaacaaaaac 4105208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 478
Target Start/End: Complemental strand, 8060061 - 8060022
Alignment:
Q  439 cttagggcacaagttaaggaacttaaaatgaaaataaaaa 478  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  8060061 cttagggcacaagttaaggagcttaaaatggaaataaaaa 8060022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 38500487 - 38500440
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||||||    
T  38500487 taaaatatttttgttttgaattacccctctaataggccaaacaaaaac 38500440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 40411423 - 40411458
Alignment:
Q  363 acctatattacagggggtaaagacctattaacctta 398  Q
    ||||||||| ||||||||||||||||||||||||||    
T  40411423 acctatattgcagggggtaaagacctattaacctta 40411458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Complemental strand, 40652652 - 40652621
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  40652652 acctatattacagggggtaaagacctattaac 40652621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 8388147 - 8388117
Alignment:
Q  363 acctatattacagggggtaaagacctattaa 393  Q
    |||||||||||||||||||||||||||||||    
T  8388147 acctatattacagggggtaaagacctattaa 8388117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 27198351 - 27198301
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||| | ||||||||||||    
T  27198351 tgtaaaatatttttgttttgatttacccccctaatatgccaaacaaaaacc 27198301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 395
Target Start/End: Original strand, 27987552 - 27987582
Alignment:
Q  365 ctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||    
T  27987552 ctatattacagggggtaaagacctattaacc 27987582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 395
Target Start/End: Original strand, 28044854 - 28044884
Alignment:
Q  365 ctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||    
T  28044854 ctatattacagggggtaaagacctattaacc 28044884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 1600107 - 1600078
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  1600107 tatattacagggggtaaagacctattaacc 1600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 12330548 - 12330494
Alignment:
Q  180 atcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||| ||||||||||||||||||  | |||||||| ||||||||||||    
T  12330548 atcccctgtaaaatatttttgttttgatttac--ccctaataggccaaacaaaaacc 12330494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 466
Target Start/End: Original strand, 12398015 - 12398060
Alignment:
Q  421 taacttgtgccctaagtgcttagggcacaagttaaggaacttaaaa 466  Q
    |||||||||||||||| |||||||||||||| |||| |||| ||||    
T  12398015 taacttgtgccctaagggcttagggcacaagataagaaactaaaaa 12398060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 17812149 - 17812112
Alignment:
Q  199 tgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  17812149 tgttttgatttacccctctaatagggcaaacaataacc 17812112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 27543591 - 27543550
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  27543591 tttttgttttgatttacccccctaataggccaaacaaaaacc 27543550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 43400701 - 43400672
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  43400701 tatattacagggggtaaagacctattaacc 43400672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 43945199 - 43945170
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  43945199 tatattacagggggtaaagacctattaacc 43945170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 960352 - 960399
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  960352 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaa 960399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 2270315 - 2270347
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||| |||||||||||||||||||||||||    
T  2270315 acctataatacagggggtaaagacctattaacc 2270347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 3912504 - 3912536
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||| ||||||||    
T  3912504 acctatattacagggggtaaagacttattaacc 3912536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 4105131 - 4105178
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  4105131 taaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 4105178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 9513861 - 9513829
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||| ||||||||    
T  9513861 acctatattacagggggtaaagacatattaacc 9513829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 12330414 - 12330461
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  12330414 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaa 12330461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 25277564 - 25277604
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  25277564 tttttgttttgatttacccccctaataggccaaacaaaaac 25277604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 25601924 - 25601876
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||| | ||||||||||    
T  25601924 tgtaaaatatttttgttttgatttacccccctaatatgccaaacaaaaa 25601876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 25601971 - 25602003
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||| ||||||||||||||||||||    
T  25601971 acctatattacatggggtaaagacctattaacc 25602003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 27198177 - 27198145
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  27198177 acctatattacaggggataaagacctattaacc 27198145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 27198235 - 27198275
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  27198235 tttttgttttgatttacccccctaataggccaaacaaaaac 27198275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 27543483 - 27543523
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  27543483 tttttgttttgatttacccccctaataggccaaacaaaaac 27543523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 27987330 - 27987298
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  27987330 acctatattatagggggtaaagacctattaacc 27987298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 28044632 - 28044600
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  28044632 acctatattatagggggtaaagacctattaacc 28044600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 29309798 - 29309830
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||| |||||||||||    
T  29309798 acctatattacagggggtaaaaacctattaacc 29309830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 29726185 - 29726233
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||| ||||||||||| | |||||||| ||||||||||    
T  29726185 tgtaaaatatttttggtttgatttacccccctaataggccaaacaaaaa 29726233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 40702034 - 40702066
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||| ||||||||||    
T  40702034 acctatattacagggggtaaaggcctattaacc 40702066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 41565363 - 41565403
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  41565363 tttttgttttgatttacccccctaataggccaaacaaaaac 41565403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 43121160 - 43121208
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||  | |||||||| ||||||||||    
T  43121160 tgtaaaatatttttgttttgatttactcccctaataggccaaacaaaaa 43121208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 44328612 - 44328548
Alignment:
Q  442 agggcacaagttaaggaacttaaaatgaaaat-aaaaatatattttaacttaaaagtataacttt 505  Q
    |||| ||||||||||||  |||||||| |||| ||||||| ||||||  ||||||||||||||||    
T  44328612 agggtacaagttaaggagtttaaaatggaaattaaaaataaattttatattaaaagtataacttt 44328548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 17328301 - 17328251
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17328301 tgtaaaatatttttgttttgatttacctctctaataggccaaacaaaaacc 17328251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 478
Target Start/End: Original strand, 38606831 - 38606888
Alignment:
Q  421 taacttgtgccctaagtgcttagggcacaagttaaggaacttaaaatgaaaataaaaa 478  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||    
T  38606831 taacttgtgccctaagggcttagggcacaagtgaaggagcttaaaatgaaattaaaaa 38606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 22535660 - 22535609
Alignment:
Q  185 ttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  22535660 ttgtaaaacatttttgttttgatttacccccctaataggccaaacaaaaacc 22535609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 37147761 - 37147711
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  37147761 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacc 37147711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 38386138 - 38386088
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  38386138 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacc 38386088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3364537 - 3364488
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  3364537 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 3364488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 364 - 403
Target Start/End: Original strand, 38937533 - 38937572
Alignment:
Q  364 cctatattacagggggtaaagacctattaaccttattatt 403  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  38937533 cctatattacagggggtaaagacctattaaccctattatt 38937572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 9011964 - 9011910
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||| |||||||||||| |||||| | |||||||| ||||||||||||    
T  9011964 cccttgtaaaatatttttgttttggtttacccccctaataggccaaacaaaaacc 9011910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 28149515 - 28149565
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  28149515 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 28149565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 28484568 - 28484518
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| |||||||||||||||||| ||||||||||  ||||||||||||    
T  28484568 tgtaaaatatttttgttttgatttacatctctaatagatcaaacaaaaacc 28484518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 397
Target Start/End: Complemental strand, 38385968 - 38385934
Alignment:
Q  363 acctatattacagggggtaaagacctattaacctt 397  Q
    |||||||||||||||||||||||||||||||||||    
T  38385968 acctatattacagggggtaaagacctattaacctt 38385934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 39228003 - 39227953
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||  |||||||||| ||||||||||||    
T  39228003 tgtaaaatatttttgttttgatttactcctctaataggccaaacaaaaacc 39227953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 16577196 - 16577245
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  16577196 tgtaaaatatttttgttttgatttacccccctaataggtcaaacaaaaac 16577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 397
Target Start/End: Complemental strand, 16670531 - 16670498
Alignment:
Q  364 cctatattacagggggtaaagacctattaacctt 397  Q
    ||||||||||||||||||||||||||||||||||    
T  16670531 cctatattacagggggtaaagacctattaacctt 16670498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 17328173 - 17328222
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||  ||||||||||||||||||||| ||||||| |||||||||||    
T  17328173 tgtaaaatgtttttgttttgatttacctctttaataggccaaacaaaaac 17328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 28484440 - 28484489
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  28484440 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 28484489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 34831854 - 34831809
Alignment:
Q  135 tttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||    
T  34831854 tttatctcatgtaatataggttatttccgatttttctccctgtaaa 34831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 37147628 - 37147681
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  37147628 cccttataaaatatttttgttttgatttacccccctaataggccaaacaaaaac 37147681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 16577371 - 16577403
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  16577371 acctatattacagggggtaaagacctattaacc 16577403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 17328125 - 17328093
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  17328125 acctatattacagggggtaaagacctattaacc 17328093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 19493472 - 19493504
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  19493472 acctatattacagggggtaaagacctattaacc 19493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 19641479 - 19641447
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  19641479 acctatattacagggggtaaagacctattaacc 19641447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 19840072 - 19840040
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  19840072 acctatattacagggggtaaagacctattaacc 19840040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 21620658 - 21620694
Alignment:
Q  442 agggcacaagttaaggaacttaaaatgaaaataaaaa 478  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21620658 agggcacaagttaaggaacttaaaatggaaataaaaa 21620694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 22116188 - 22116156
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  22116188 acctatattacagggggtaaagacctattaacc 22116156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 25227908 - 25227956
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  25227908 taaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 25227956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 27010239 - 27010188
Alignment:
Q  127 aataggtatttacctcttgtaatataggttatttctgatttttctccctgtaa 179  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| ||||||||    
T  27010239 aataggtctttaccttttgtaatataggttatttccgatttttc-ccctgtaa 27010188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 28149645 - 28149594
Alignment:
Q  183 ccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  28149645 ccttgtaaaatatttttgttttgatttacc-cactaataggccaaacaaaaac 28149594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 29098225 - 29098177
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||| ||||||||| |||||||| ||||||||||    
T  29098225 tgtaaaatatttttgttttcatttacctccctaataggccaaacaaaaa 29098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 29835135 - 29835103
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  29835135 acctatattacagggggtaaagacctattaacc 29835103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 34428667 - 34428635
Alignment:
Q  366 tatattacagggggtaaagacctattaacctta 398  Q
    |||||||||||||||||||||||||||||||||    
T  34428667 tatattacagggggtaaagacctattaacctta 34428635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 34635739 - 34635707
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  34635739 acctatattacagggggtaaagacctattaacc 34635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 37147584 - 37147552
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  37147584 acctatattacagggggtaaagacctattaacc 37147552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 38210897 - 38210865
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  38210897 acctatattacagggggtaaagacctattaacc 38210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 22535535 - 22535581
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  22535535 taaaatatttttgttttgatttacc-ctctaataggccaaacaaaaac 22535581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Original strand, 23835797 - 23835828
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  23835797 cctatattacagggggtaaagacctattaacc 23835828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Original strand, 30371620 - 30371651
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  30371620 acctatattacagggggtaaagacctattaac 30371651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Complemental strand, 43301913 - 43301882
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  43301913 acctatattacagggggtaaagacctattaac 43301882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 1498967 - 1499016
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  1498967 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 1499016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 3364415 - 3364457
Alignment:
Q  194 atttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||||||||||| | |||||||| ||||||||||||    
T  3364415 atttttgttttgatttaccaccctaataggccaaacaaaaacc 3364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 539
Target Start/End: Original strand, 21620777 - 21620807
Alignment:
Q  509 ttcttaacttatgcctcaaaggcacaagtta 539  Q
    |||||||||||||||||||||||||||||||    
T  21620777 ttcttaacttatgcctcaaaggcacaagtta 21620807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 170
Target Start/End: Original strand, 23381177 - 23381211
Alignment:
Q  136 ttacctcttgtaatataggttatttctgatttttc 170  Q
    |||||||||||||||||||| ||||||||||||||    
T  23381177 ttacctcttgtaatataggtcatttctgatttttc 23381211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Original strand, 3364588 - 3364617
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  3364588 tatattacagggggtaaagacctattaacc 3364617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 12693664 - 12693705
Alignment:
Q  194 atttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||||||| | |||||||| |||||||||||    
T  12693664 atttttgttttgatttacccccctaataggccaaacaaaaac 12693705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 18555668 - 18555709
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  18555668 tttttgttttgatttacccccctaataggccaaacaaaaacc 18555709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 18701584 - 18701551
Alignment:
Q  363 acctatattacagggggtaaagacctattaacct 396  Q
    |||||||||||||||| |||||||||||||||||    
T  18701584 acctatattacaggggataaagacctattaacct 18701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Original strand, 19052200 - 19052229
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  19052200 tatattacagggggtaaagacctattaacc 19052229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 25228034 - 25227985
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||| ||||| | |||||||| |||||||||||    
T  25228034 tgtaaaatatttttgttttgaattacccccctaataggccaaacaaaaac 25227985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 25926965 - 25927013
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  25926965 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 25927013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 34635908 - 34635867
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  34635908 tttttgttttgatttacccccctaataggccaaacaaaaacc 34635867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 407
Target Start/End: Original strand, 38877048 - 38877089
Alignment:
Q  366 tatattacagggggtaaagacctattaaccttattattaatt 407  Q
    ||||||||||||||||||| |||||||||| ||| |||||||    
T  38877048 tatattacagggggtaaagccctattaaccctataattaatt 38877089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 39227875 - 39227923
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  39227875 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 39227923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 12028231 - 12028199
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  12028231 acctatattacagggtgtaaagacctattaacc 12028199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 18701642 - 18701682
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  18701642 tttttgttttgatttacccttctaataggtcaaacaaaaac 18701682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 19052146 - 19052098
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| |||||||||||||||||| || |||||||  ||||||||||||    
T  19052146 taaaatatttttgttttgatttacatccctaatagaccaaacaaaaacc 19052098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 19493306 - 19493274
Alignment:
Q  366 tatattacagggggtaaagacctattaacctta 398  Q
    ||||||||||||| |||||||||||||||||||    
T  19493306 tatattacaggggataaagacctattaacctta 19493274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 20182297 - 20182257
Alignment:
Q  363 acctatattacagggggtaaagacctattaaccttattatt 403  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  20182297 acctatattacaggggataaaaacctattaaccctattatt 20182257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 20182454 - 20182418
Alignment:
Q  200 gttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  20182454 gttttgatttacccctctaataggccaaacaaaaacc 20182418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 20182518 - 20182550
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||| |||||||||||||||||||||    
T  20182518 acctatattacggggggtaaagacctattaacc 20182550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 21302316 - 21302264
Alignment:
Q  126 taataggtatttacctcttgtaatataggttatttctgatttttctccctgta 178  Q
    |||||||| |||||||  |||||||||||| ||||| ||||||| ||||||||    
T  21302316 taataggtttttaccttctgtaatataggtcatttccgatttttttccctgta 21302264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 22535487 - 22535455
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  22535487 acctatattaaagggggtaaagacctattaacc 22535455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 22535707 - 22535739
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||| ||||||||||||||||||    
T  22535707 acctatattacaggaggtaaagacctattaacc 22535739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 23260353 - 23260321
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  23260353 acctatattacagggagtaaagacctattaacc 23260321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 25927180 - 25927124
Alignment:
Q  120 aagggctaataggtatttacctcttgtaatataggttatttctgatttttctccctg 176  Q
    ||||| |||||||| |||| | |||||||||||||| ||||||| |||||| |||||    
T  25927180 aagggttaataggtctttatcccttgtaatataggtcatttctggtttttccccctg 25927124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 28149690 - 28149722
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||| |||||||||||    
T  28149690 acctatattacagggggtaaaaacctattaacc 28149722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 30371418 - 30371386
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  30371418 acctatattacagggagtaaagacctattaacc 30371386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 31260994 - 31260950
Alignment:
Q  135 tttacctcttgtaatataggttatttctgatttttctccctgtaa 179  Q
    ||||||||||||||||||||| ||||||||| || | ||||||||    
T  31260994 tttacctcttgtaatataggtcatttctgatattccaccctgtaa 31260950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 33641165 - 33641133
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  33641165 acctatattacagagggtaaagacctattaacc 33641133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 15336379 - 15336486
Alignment:
Q  126 taataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaatcccttgtaaaacatttttgttttgatttacctctctaatagggc 225  Q
    |||||||| |||||| | |||||||||||| |||| || |||||| ||||||||||||| ||||||| |||||||||||||||||   |  ||||||| |    
T  15336379 taataggtctttaccccctgtaatataggtcatttttggtttttc-ccctgtaaatccc-tgtaaaatatttttgttttgatttattcccttaataggcc 15336476  T
Q  226 aaacaaaaac 235  Q
    ||||||||||    
T  15336477 aaacaaaaac 15336486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 505
Target Start/End: Complemental strand, 19234956 - 19234889
Alignment:
Q  439 cttagggcacaagttaaggaacttaaaat-gaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    ||||||||||||||||||||||||||||| |||| |||||||| ||||||  || |||||||||||||    
T  19234956 cttagggcacaagttaaggaacttaaaatggaaattaaaaataaattttatattgaaagtataacttt 19234889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 31532466 - 31532416
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  31532466 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacc 31532416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 7112571 - 7112624
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||||||||||||||||| | | |||||||| |||||||||||    
T  7112571 cccttgtaaaacatttttgttttgatttatccccctaataggccaaacaaaaac 7112624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 30434459 - 30434407
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  30434459 cccttgtaaaatatttttgttttgatttacctc-ctaataggccaaacaaaaac 30434407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 4646839 - 4646889
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  4646839 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 4646889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 5330630 - 5330580
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  5330630 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 5330580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 5348345 - 5348295
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  5348345 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 5348295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 6540800 - 6540846
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaa 232  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  6540800 tgtaaaatatttttgttttgatttacccctctaataggccaaacaaa 6540846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 28411123 - 28411073
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| |||||||||| || |||||||||    
T  28411123 tgtaaaatatttttgttttgatttacccctctaataggccagacaaaaacc 28411073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 51904068 - 51904110
Alignment:
Q  194 atttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  51904068 atttttgttttgatttacctccctaataggccaaacaaaaacc 51904110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 24987641 - 24987604
Alignment:
Q  363 acctatattacagggggtaaagacctattaaccttatt 400  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24987641 acctatattacagggggtaaagacctattaaccctatt 24987604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27794439 - 27794488
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  27794439 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 27794488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 28724505 - 28724456
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  28724505 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 28724456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 29018572 - 29018523
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||||    
T  29018572 tgtaaaatatttttgttttgatttacccctctaatagaccaaacaaaaac 29018523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 32131927 - 32131964
Alignment:
Q  363 acctatattacagggggtaaagacctattaaccttatt 400  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  32131927 acctatattacagggggtaaagacctattaaccctatt 32131964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 2472608 - 2472640
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  2472608 acctatattacagggggtaaagacctattaacc 2472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 7112748 - 7112780
Alignment:
Q  366 tatattacagggggtaaagacctattaacctta 398  Q
    |||||||||||||||||||||||||||||||||    
T  7112748 tatattacagggggtaaagacctattaacctta 7112780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 9439426 - 9439458
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  9439426 acctatattacagggggtaaagacctattaacc 9439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 10028001 - 10028033
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  10028001 acctatattacagggggtaaagacctattaacc 10028033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 18458826 - 18458858
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  18458826 acctatattacagggggtaaagacctattaacc 18458858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 24963062 - 24963002
Alignment:
Q  120 aagggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||| |||||||  |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  24963062 aagggttaataggcttttaccccctgtaatataggttatttttgattttcctccctgtaaa 24963002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 25235807 - 25235775
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  25235807 acctatattacagggggtaaagacctattaacc 25235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 26095847 - 26095815
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  26095847 acctatattacagggggtaaagacctattaacc 26095815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 26097051 - 26097083
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  26097051 acctatattacagggggtaaagacctattaacc 26097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 47022093 - 47022125
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  47022093 acctatattacagggggtaaagacctattaacc 47022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 505
Target Start/End: Original strand, 49497046 - 49497110
Alignment:
Q  442 agggcacaagttaaggaacttaaaatgaaaa-taaaaatatattttaacttaaaagtataacttt 505  Q
    ||||||||| |||||||  |||||||||||| |||||||||||| ||  ||||||||||||||||    
T  49497046 agggcacaaattaaggagtttaaaatgaaaattaaaaatatattatatattaaaagtataacttt 49497110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Complemental strand, 1825327 - 1825296
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  1825327 acctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 9043650 - 9043600
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacct 237  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||||    
T  9043650 tgtaaaatatttttgttttgatttacc-ccctaataggtcaaacaaaaacct 9043600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 505
Target Start/End: Complemental strand, 9424669 - 9424602
Alignment:
Q  439 cttagggcacaagttaaggaacttaaaat-gaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    |||||| || ||||||||||||||||||| |||| |||||||| ||||||  |||||| |||||||||    
T  9424669 cttaggacataagttaaggaacttaaaatggaaattaaaaataaattttatattaaaaatataacttt 9424602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 14625402 - 14625371
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  14625402 cctatattacagggggtaaagacctattaacc 14625371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Complemental strand, 21853449 - 21853418
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  21853449 acctatattacagggggtaaagacctattaac 21853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 43635867 - 43635836
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  43635867 cctatattacagggggtaaagacctattaacc 43635836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 50596211 - 50596168
Alignment:
Q  126 taataggtatttacctcttgtaatataggttatttctgattttt 169  Q
    |||||||| |||||| |||||||||||||||||||||| |||||    
T  50596211 taataggtctttaccccttgtaatataggttatttctggttttt 50596168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 2059450 - 2059480
Alignment:
Q  363 acctatattacagggggtaaagacctattaa 393  Q
    |||||||||||||||||||||||||||||||    
T  2059450 acctatattacagggggtaaagacctattaa 2059480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 364 - 394
Target Start/End: Complemental strand, 2273533 - 2273503
Alignment:
Q  364 cctatattacagggggtaaagacctattaac 394  Q
    |||||||||||||||||||||||||||||||    
T  2273533 cctatattacagggggtaaagacctattaac 2273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 7112698 - 7112648
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| |||||||||||||||||||  ||||||||| |||| |||||||    
T  7112698 tgtaaaatatttttgttttgatttacccttctaataggtcaaataaaaacc 7112648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 13154661 - 13154710
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  13154661 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 13154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 15336408 - 15336378
Alignment:
Q  363 acctatattacagggggtaaagacctattaa 393  Q
    |||||||||||||||||||||||||||||||    
T  15336408 acctatattacagggggtaaagacctattaa 15336378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 16698951 - 16699001
Alignment:
Q  186 tgtaaaacatttttgtttt-gatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||| |||||||| |||||||||| |||||||||||    
T  16698951 tgtaaaatatttttgtttttgatttaccactctaataggccaaacaaaaac 16699001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 27794569 - 27794519
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| |||||||||||| |||||| | |||||||| ||||||||||||    
T  27794569 tgtaaaatatttttgttttgctttacccccctaataggccaaacaaaaacc 27794519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 28724377 - 28724427
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| |||||||||||||||||||   |||||||| ||||||||||||    
T  28724377 tgtaaaatatttttgttttgatttaccctcctaataggccaaacaaaaacc 28724427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 34360118 - 34360156
Alignment:
Q  197 tttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  34360118 tttgttttgatttacccctctaataggccaaacaaaaac 34360156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 36343237 - 36343283
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaa 232  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||    
T  36343237 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaa 36343283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 36343362 - 36343312
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  36343362 tgtaaaatatttttgttttgatttacccccttaataggccaaacaaaaacc 36343312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 42847606 - 42847644
Alignment:
Q  198 ttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  42847606 ttgttttgatttacctccctaataggccaaacaaaaacc 42847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 5330501 - 5330550
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||| | | |||||||| |||||||||||    
T  5330501 tgtaaaatatttttgttttgatttatccccctaataggccaaacaaaaac 5330550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 7112524 - 7112495
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  7112524 tatattacagggggtaaagacctattaacc 7112495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 8928845 - 8928816
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  8928845 tatattacagggggtaaagacctattaacc 8928816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 13545609 - 13545580
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  13545609 tatattacagggggtaaagacctattaacc 13545580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Original strand, 30659435 - 30659464
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  30659435 tatattacagggggtaaagacctattaacc 30659464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 33573845 - 33573804
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  33573845 tttttgttttgatttacccccctaataggccaaacaaaaacc 33573804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 51470159 - 51470130
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  51470159 tatattacagggggtaaagacctattaacc 51470130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 2059275 - 2059319
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaaca 230  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||    
T  2059275 tgtaaaatatttttgttttgatttacccccctaataggccaaaca 2059319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 2059402 - 2059355
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  2059402 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaa 2059355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 2472423 - 2472391
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  2472423 acctatattacaggggttaaagacctattaacc 2472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 5348196 - 5348164
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  5348196 acctatattacagagggtaaagacctattaacc 5348164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 13903395 - 13903427
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||| |||||||||    
T  13903395 acctatattacagggggtaaagatctattaacc 13903427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 16699080 - 16699033
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  16699080 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaa 16699033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 18458771 - 18458731
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  18458771 tttttgttttgatttacccccctaataggccaaacaaaaac 18458731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 22604686 - 22604718
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  22604686 acctatattacaggggttaaagacctattaacc 22604718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 28410947 - 28410915
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  28410947 acctatattacaggggataaagacctattaacc 28410915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 28724358 - 28724326
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||| ||||||||||||||||||||||||||    
T  28724358 acctattttacagggggtaaagacctattaacc 28724326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 30434313 - 30434281
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||| |||||||    
T  30434313 acctatattacagggggtaaagaccgattaacc 30434281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 35034319 - 35034351
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  35034319 acctatattacaggggataaagacctattaacc 35034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 505
Target Start/End: Original strand, 42489192 - 42489256
Alignment:
Q  442 agggcacaagttaaggaacttaaaatgaaaat-aaaaatatattttaacttaaaagtataacttt 505  Q
    |||||| ||||||||||  |||||||| |||| ||||||| ||||||  ||||||||||||||||    
T  42489192 agggcagaagttaaggagtttaaaatggaaattaaaaataaattttatattaaaagtataacttt 42489256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 42736845 - 42736877
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  42736845 acctatattacaggggataaagacctattaacc 42736877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 46136119 - 46136087
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||| ||||||||    
T  46136119 acctatattacagggggtaaagacttattaacc 46136087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 47022045 - 47021998
Alignment:
Q  185 ttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||| |||||||||||||||||||   |||||||| |||||||||||    
T  47022045 ttgtaaaatatttttgttttgatttacc---ctaataggccaaacaaaaac 47021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 50596182 - 50596214
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||| ||||||||||||||||||||    
T  50596182 acctatattacaaggggtaaagacctattaacc 50596214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 51252259 - 51252209
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  51252259 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacc 51252209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 3548335 - 3548282
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  3548335 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 3548282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 12767222 - 12767166
Alignment:
Q  123 ggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||| |||||||||    
T  12767222 ggctaataggtctttaccccttgtaatataggtcatttctgatttttc-ccctgtaaa 12767166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 29313867 - 29313916
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||||    
T  29313867 tgtaaaacatttttgttttgatttacccccctaataggccaaacaaaaac 29313916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 49872929 - 49872876
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  49872929 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 49872876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 8355546 - 8355494
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  8355546 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 8355494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 43767866 - 43767818
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  43767866 taaaatatttttgttttgatttacccctctaataggtcaaacaaaaacc 43767818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 51252126 - 51252178
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  51252126 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 51252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 3548204 - 3548253
Alignment:
Q  187 gtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  3548204 gtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 3548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22949328 - 22949377
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  22949328 tgtaaaatatttttgttttgatttaccccgctaataggtcaaacaaaaac 22949377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 25323874 - 25323833
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  25323874 tttttgttttgatttacccctctaataggccaaacaaaaacc 25323833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 27432799 - 27432750
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaa 231  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||    
T  27432799 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaa 27432750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 30271625 - 30271674
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  30271625 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 30271674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 6510248 - 6510216
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  6510248 acctatattacagggggtaaagacctattaacc 6510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 27760500 - 27760449
Alignment:
Q  183 ccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  27760500 ccttgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 27760449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 29313990 - 29313942
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||| | |||||||||| ||||||||||    
T  29313990 tgtaaaatatttttgttttgatttatccctctaataggtcaaacaaaaa 29313942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 47115586 - 47115618
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  47115586 acctatattacagggggtaaagacctattaacc 47115618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 49872973 - 49873005
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  49872973 acctatattacagggggtaaagacctattaacc 49873005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 49880761 - 49880793
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  49880761 acctatattacagggggtaaagacctattaacc 49880793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 51460787 - 51460819
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  51460787 acctatattacagggggtaaagacctattaacc 51460819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 53806773 - 53806725
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    |||||||  |||||||||||||||||||| |||||||| ||||||||||    
T  53806773 tgtaaaaattttttgttttgatttacctcactaataggccaaacaaaaa 53806725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 54567767 - 54567799
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  54567767 acctatattacagggggtaaagacctattaacc 54567799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 10615307 - 10615276
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  10615307 cctatattacagggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Complemental strand, 22949279 - 22949248
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  22949279 acctatattacagggggtaaagacctattaac 22949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Original strand, 37977531 - 37977562
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  37977531 cctatattacagggggtaaagacctattaacc 37977562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Original strand, 46597533 - 46597564
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  46597533 cctatattacagggggtaaagacctattaacc 46597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 46610041 - 46610010
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  46610041 cctatattacagggggtaaagacctattaacc 46610010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 3072613 - 3072575
Alignment:
Q  197 tttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  3072613 tttgttttgatttacccctctaataggccaaacaaaaac 3072575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 5416142 - 5416191
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  5416142 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 5416191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 7584328 - 7584377
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  7584328 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 7584377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 8827449 - 8827479
Alignment:
Q  363 acctatattacagggggtaaagacctattaa 393  Q
    |||||||||||||||||||||||||||||||    
T  8827449 acctatattacagggggtaaagacctattaa 8827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 12767143 - 12767094
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  12767143 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 12767094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 395
Target Start/End: Original strand, 20957195 - 20957225
Alignment:
Q  365 ctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||    
T  20957195 ctatattacagggggtaaagacctattaacc 20957225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 30271754 - 30271704
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||| ||| ||||||||||||    
T  30271754 tgtaaaatatttttgttttgatttacccccctaagaggccaaacaaaaacc 30271704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 30586245 - 30586295
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||  ||||||||||||    
T  30586245 tgtaaaatatttttgttttgatttacccccctaatagaccaaacaaaaacc 30586295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 36867717 - 36867767
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||| ||||||| | |||||||| ||||||||||||    
T  36867717 tgtaaaatatttttgttttcatttacccccctaataggtcaaacaaaaacc 36867767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 5417243 - 5417194
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||||  |||||||  |||||||||||    
T  5417243 tgtaaaatatttttgttttgatttaccttcctaatagaccaaacaaaaac 5417194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 27497829 - 27497800
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  27497829 tatattacagggggtaaagacctattaacc 27497800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 30586373 - 30586324
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| |||||||||||||||||||   |||||||| |||||||||||    
T  30586373 tgtaaaatatttttgttttgatttaccctcctaataggccaaacaaaaac 30586324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 43767741 - 43767789
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||| | |||||||||| |||||||||||    
T  43767741 tgtaaaatatttttgttttgatttatc-ctctaataggccaaacaaaaac 43767789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 49880594 - 49880635
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  49880594 tttttgttttgatttacccccctaataggccaaacaaaaacc 49880635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5205208 - 5205248
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  5205208 tttttgttttgatttaccaccctaataggccaaacaaaaac 5205248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 5205320 - 5205280
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  5205320 tttttgttttgatttacccccctaataggccaaacaaaaac 5205280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 14241247 - 14241215
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||| ||||    
T  14241247 acctatattacagggggtaaagacctataaacc 14241215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 18140973 - 18140941
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||| ||||||||||    
T  18140973 acctatattacagggggtaaaggcctattaacc 18140941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 18142221 - 18142253
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||| ||||||||||    
T  18142221 acctatattacagggggtaaaggcctattaacc 18142253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 19623986 - 19623938
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| |||||||||||||||||||   |||||||| ||||||||||    
T  19623986 tgtaaaatatttttgttttgatttacccgcctaataggccaaacaaaaa 19623938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 20957039 - 20957079
Alignment:
Q  196 ttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||||||||| | |||||||| ||||||||||||    
T  20957039 ttttgttttgatttacccccctaataggccaaacaaaaacc 20957079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 25110037 - 25109989
Alignment:
Q  187 gtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||| |||||||||||||||||||   |||||||| |||||||||||    
T  25110037 gtaaaatatttttgttttgatttaccctcctaataggccaaacaaaaac 25109989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 25110085 - 25110117
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  25110085 acctatattacagggtgtaaagacctattaacc 25110117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 27521613 - 27521653
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  27521613 tttttgttttgatttacccccctaataggccaaacaaaaac 27521653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 27760322 - 27760290
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||| ||||||||    
T  27760322 acctatattacagggggtaaagacttattaacc 27760290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 29313821 - 29313789
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||| ||||||||||||||||||    
T  29313821 acctatattacaggaggtaaagacctattaacc 29313789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 48044306 - 48044270
Alignment:
Q  364 cctatattacagggggtaaagacctattaaccttatt 400  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  48044306 cctatatcacagggggtaaagacctattaactttatt 48044270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 51252082 - 51252050
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  51252082 acctatattacagggagtaaagacctattaacc 51252050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 53806820 - 53806852
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||| ||||||||||||||||||||    
T  53806820 acctatattacaaggggtaaagacctattaacc 53806852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 711316 - 711369
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||| ||||||||||||||||||| |||||||||| |||||||||||    
T  711316 cccttgtgaaatatttttgttttgatttacccctctaataggccaaacaaaaac 711369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9226931 - 9226980
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  9226931 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 9226980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 12382908 - 12382957
Alignment:
Q  187 gtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  12382908 gtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacc 12382957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 15061848 - 15061892
Alignment:
Q  364 cctatattacagggggtaaagacctattaaccttattattaattt 408  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  15061848 cctatattacagggggtaaagacctattaaccctatttttaattt 15061892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 12330933 - 12330983
Alignment:
Q  184 cttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  12330933 cttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 12330983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 33483101 - 33483051
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  33483101 tgtaaaatatttttgttttgatttatctccctaataggacaaacaaaaacc 33483051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 20688876 - 20688925
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  20688876 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 20688925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 26035062 - 26035010
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  26035062 cccttgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 26035010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 31861572 - 31861621
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  31861572 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 31861621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 10976771 - 10976803
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  10976771 acctatattacagggggtaaagacctattaacc 10976803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 12399610 - 12399642
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  12399610 acctatattacagggggtaaagacctattaacc 12399642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 22551555 - 22551523
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  22551555 acctatattacagggggtaaagacctattaacc 22551523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 29104477 - 29104445
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  29104477 acctatattacagggggtaaagacctattaacc 29104445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 38482351 - 38482319
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  38482351 acctatattacagggggtaaagacctattaacc 38482319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 15615135 - 15615104
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  15615135 cctatattacagggggtaaagacctattaacc 15615104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 505
Target Start/End: Complemental strand, 22874346 - 22874287
Alignment:
Q  447 acaagttaaggaacttaaaatgaaaa-taaaaatatattttaacttaaaagtataacttt 505  Q
    ||||||||||||| |||||||||||| |||||||| ||||||  |||||| |||||||||    
T  22874346 acaagttaaggaatttaaaatgaaaattaaaaataaattttatattaaaaatataacttt 22874287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 26213456 - 26213417
Alignment:
Q  196 ttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  26213456 ttttgttttgatttacctctttaataggccaaacaaaaac 26213417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 20689052 - 20689082
Alignment:
Q  363 acctatattacagggggtaaagacctattaa 393  Q
    |||||||||||||||||||||||||||||||    
T  20689052 acctatattacagggggtaaagacctattaa 20689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 31861702 - 31861652
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | ||||||||  |||||||||||    
T  31861702 tgtaaaatatttttgttttgatttacccccctaataggctaaacaaaaacc 31861652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 39153600 - 39153550
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||  | |||||||| ||||||||||||    
T  39153600 tgtaaaatatttttgttttgatttactcccctaataggccaaacaaaaacc 39153550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 40339412 - 40339461
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  40339412 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 40339461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 41797713 - 41797663
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||||| |||||||| ||  ||||||||    
T  41797713 tgtaaaatatttttgttttgatttacctccctaataggtcattcaaaaacc 41797663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 42119265 - 42119216
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  42119265 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 42119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 5718317 - 5718358
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  5718317 tttttgttttgatttacccccctaataggccaaacaaaaacc 5718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21149076 - 21149027
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||  | |||||||| |||||||||||    
T  21149076 tgtaaaatatttttgttttgatttactcccctaataggccaaacaaaaac 21149027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 26034938 - 26034979
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  26034938 tttttgttttgatttacccccctaataggccaaacaaaaacc 26034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 36354760 - 36354711
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| |||||||||||||||||||||  ||||||| ||| |||||||    
T  36354760 tgtaaaatatttttgttttgatttacctccttaataggccaatcaaaaac 36354711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 505
Target Start/End: Original strand, 38869863 - 38869955
Alignment:
Q  413 ggtcacgttaacttgtgccctaagtgcttagggcacaagttaaggaacttaaaat-gaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    ||||| ||||||||||||||| |  ||| ||||||||| ||||||| || ||||| |||| |||||||| ||||||  |||||| |||||||||    
T  38869863 ggtcatgttaacttgtgcccttaaggctaagggcacaaattaaggatctaaaaatggaaattaaaaataaattttatattaaaa-tataacttt 38869955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 39153469 - 39153518
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||| | | |||||||| |||||||||||    
T  39153469 tgtaaaatatttttgttttgatttatccccctaataggccaaacaaaaac 39153518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 2870908 - 2870940
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||| ||||||||||||||||||    
T  2870908 acctatattacaggaggtaaagacctattaacc 2870940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 5747411 - 5747447
Alignment:
Q  198 ttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  5747411 ttgttttgatttacccctctaataggccaaacaaaaa 5747447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 9227108 - 9227144
Alignment:
Q  363 acctatattacagggg-gtaaagacctattaacctta 398  Q
    |||||||||||||||| ||||||||||||||||||||    
T  9227108 acctatattacaggggtgtaaagacctattaacctta 9227144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 10976714 - 10976674
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  10976714 tttttgttttgatttacccccctaataggtcaaacaaaaac 10976674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 28819569 - 28819537
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||| ||||||||||    
T  28819569 acctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 31861524 - 31861492
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  31861524 acctatattacaggggataaagacctattaacc 31861492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 33052850 - 33052818
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||| ||||||||||||||||||||    
T  33052850 acctatattacaaggggtaaagacctattaacc 33052818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 33658904 - 33658868
Alignment:
Q  363 acctatattacaggggg-taaagacctattaacctta 398  Q
    ||||||||||||||||| |||||||||||||||||||    
T  33658904 acctatattacaggggggtaaagacctattaacctta 33658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 33658962 - 33659002
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  33658962 tttttgttttgatttacccccctaataggccaaacaaaaac 33659002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 36993007 - 36993039
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  36993007 acctatattacagagggtaaagacctattaacc 36993039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 38482316 - 38482376
Alignment:
Q  120 aagggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||| |||||||| |||||| | |||||||||||| | ||||| |||| |||||||||||    
T  38482316 aagggttaataggtctttaccccctgtaatataggtcaattctggttttcctccctgtaaa 38482376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 39418925 - 39418878
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  39418925 taaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 39418878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 18454271 - 18454324
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  18454271 cccttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 18454324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 51965451 - 51965500
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  51965451 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 51965500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 45900762 - 45900712
Alignment:
Q  185 ttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  45900762 ttgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 45900712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 472
Target Start/End: Complemental strand, 39414536 - 39414503
Alignment:
Q  439 cttagggcacaagttaaggaacttaaaatgaaaa 472  Q
    ||||||||||||||||||||||||||||||||||    
T  39414536 cttagggcacaagttaaggaacttaaaatgaaaa 39414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 39868549 - 39868597
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  39868549 tgtaaaatatttttgttttgatttacc-ccctaatagggcaaacaaaaac 39868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 550706 - 550674
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  550706 acctatattacagggggtaaagacctattaacc 550674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 11563541 - 11563573
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  11563541 acctatattacagggggtaaagacctattaacc 11563573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 20125442 - 20125474
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  20125442 acctatattacagggggtaaagacctattaacc 20125474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 21780155 - 21780123
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  21780155 acctatattacagggggtaaagacctattaacc 21780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 21798408 - 21798463
Alignment:
Q  180 atcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  21798408 atcccctgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 21798463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 24215765 - 24215797
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  24215765 acctatattacagggggtaaagacctattaacc 24215797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 37273419 - 37273451
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  37273419 acctatattacagggggtaaagacctattaacc 37273451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 50138521 - 50138489
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  50138521 acctatattacagggggtaaagacctattaacc 50138489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 1386220 - 1386165
Alignment:
Q  180 atcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||||| ||||||||||| ||||||| | |||||||| |||||||||||    
T  1386220 atcccctgtaaaatatttttgttttaatttacccccctaataggccaaacaaaaac 1386165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 13334901 - 13334951
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaa 233  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||    
T  13334901 cccttgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaa 13334951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 21994359 - 21994328
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  21994359 cctatattacagggggtaaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 394
Target Start/End: Complemental strand, 27579547 - 27579516
Alignment:
Q  363 acctatattacagggggtaaagacctattaac 394  Q
    ||||||||||||||||||||||||||||||||    
T  27579547 acctatattacagggggtaaagacctattaac 27579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 29248274 - 29248243
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  29248274 cctatattacagggggtaaagacctattaacc 29248243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Original strand, 50881447 - 50881478
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  50881447 cctatattacagggggtaaagacctattaacc 50881478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 54554415 - 54554384
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  54554415 cctatattacagggggtaaagacctattaacc 54554384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 9791620 - 9791571
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  9791620 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 9791571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 16482144 - 16482186
Alignment:
Q  194 atttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||||||||||| | ||||||| |||||||||||||    
T  16482144 atttttgttttgatttacccccctaatagagcaaacaaaaacc 16482186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 17289952 - 17289902
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||  | |||||||| ||||||||||||    
T  17289952 tgtaaaatatttttgttttgatttacgcccctaataggccaaacaaaaacc 17289902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 30966894 - 30966848
Alignment:
Q  134 atttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||||    
T  30966894 atttaccccttgtaatataggttatttttggtttttccccctgtaaa 30966848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 43751255 - 43751206
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  43751255 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 43751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 54933249 - 54933183
Alignment:
Q  440 ttagggcacaagttaaggaacttaaaatgaaaat-aaaaatatattttaacttaaaagtataacttt 505  Q
    ||||||||||||||||| | ||||||| | |||| ||||||| ||||||  ||||||||||||||||    
T  54933249 ttagggcacaagttaagaagcttaaaaaggaaattaaaaataaattttatattaaaagtataacttt 54933183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8920506 - 8920458
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||| ||||| || |||||||||||||||||||    
T  8920506 tgtaaaatatttttgttttgaattacc-ctataatagggcaaacaaaaac 8920458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 16493697 - 16493648
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| |  ||||||| |||||||||||    
T  16493697 tgtaaaatatttttgttttgatttacccccttaataggtcaaacaaaaac 16493648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 396
Target Start/End: Original strand, 17290000 - 17290033
Alignment:
Q  363 acctatattacagggggtaaagacctattaacct 396  Q
    |||||||||| |||||||||||||||||||||||    
T  17290000 acctatattatagggggtaaagacctattaacct 17290033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 43751127 - 43751175
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| || ||||||| |||||||||||    
T  43751127 tgtaaaatatttttgttttgatttacccct-taataggccaaacaaaaac 43751175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 47321066 - 47321114
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| || ||||||| |||||||||||    
T  47321066 tgtaaaatatttttgttttgatttacccct-taataggccaaacaaaaac 47321114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 53231851 - 53231904
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||| ||||||| | ||||||||  ||||||||||    
T  53231851 cccttgtaaaatatttttgttttcatttacccccctaataggctaaacaaaaac 53231904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 56467495 - 56467543
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  56467495 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 56467543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5401853 - 5401893
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  5401853 tttttgttttgatttacccccctaataggccaaacaaaaac 5401893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 11563381 - 11563421
Alignment:
Q  194 atttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||||||||||||||| | |||||||| ||||||||||    
T  11563381 atttttgttttgatttacccccctaataggccaaacaaaaa 11563421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 16493551 - 16493519
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||| ||||||||||||||||||    
T  16493551 acctatattacaggaggtaaagacctattaacc 16493519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 21798589 - 21798621
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  21798589 acctatattacaggggataaagacctattaacc 21798621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 22272963 - 22272931
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||| |||||||||||    
T  22272963 acctatattacagggggtaaaaacctattaacc 22272931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 24215803 - 24215739
Alignment:
Q  117 attaagggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaat 181  Q
    |||||||| |||||||| |||||| | |||||||||||| ||||||| ||||   ||||||||||    
T  24215803 attaagggttaataggtctttaccccctgtaatataggtcatttctggttttctcccctgtaaat 24215739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 30666989 - 30666925
Alignment:
Q  442 agggcacaagttaaggaacttaaaat-gaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    ||||||||||||||||| |||||||| |||| |||||||| ||||||  ||  ||||||||||||    
T  30666989 agggcacaagttaaggagcttaaaatagaaattaaaaataaattttatattggaagtataacttt 30666925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 31881015 - 31881051
Alignment:
Q  198 ttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  31881015 ttgttttgatttacccctctaataggtcaaacaaaaa 31881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 34027218 - 34027250
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||| ||||||||||    
T  34027218 acctatattacagggggtaaaggcctattaacc 34027250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 35539804 - 35539836
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||| |||||||||||    
T  35539804 acctatattacagggggtaaatacctattaacc 35539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 38656079 - 38656111
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  38656079 acctatattatagggggtaaagacctattaacc 38656111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 44519673 - 44519622
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||| ||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  44519673 cccttataaaatatttttgttttgatttacc-ccctaataggccaaacaaaaa 44519622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 46094264 - 46094296
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  46094264 acctatattacagagggtaaagacctattaacc 46094296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 50727623 - 50727591
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||| |||||||||||    
T  50727623 acctatattacagggggtaaaaacctattaacc 50727591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 50735637 - 50735605
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||| |||||||||||    
T  50735637 acctatattacagggggtaaaaacctattaacc 50735605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 51965405 - 51965373
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  51965405 acctatattacagggagtaaagacctattaacc 51965373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 55363889 - 55363849
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||  |||||||||| |||||||||||    
T  55363889 tttttgttttgatttacacctctaataggccaaacaaaaac 55363849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 56467623 - 56467576
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  56467623 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaa 56467576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 19410587 - 19410643
Alignment:
Q  181 tcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacct 237  Q
    |||| ||||||| ||||||||||||||||||| | |||||||| |||||||||||||    
T  19410587 tcccctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacct 19410643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 24205327 - 24205277
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  24205327 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 24205277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 24206845 - 24206795
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  24206845 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 24206795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 24555782 - 24555835
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  24555782 cccttgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 24555835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 1693299 - 1693348
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  1693299 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 1693348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 31186750 - 31186799
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  31186750 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 31186799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38193042 - 38193091
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| |||||||||| |||| ||||||    
T  38193042 tgtaaaatatttttgttttgatttacccctctaataggccaaagaaaaac 38193091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 45163990 - 45164043
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||| |||| ||||||||||||||||||| | |||||||| |||||||||||    
T  45163990 cccttgcaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 45164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 1594148 - 1594180
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  1594148 acctatattacagggggtaaagacctattaacc 1594180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 6269561 - 6269529
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  6269561 acctatattacagggggtaaagacctattaacc 6269529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 9915684 - 9915652
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  9915684 acctatattacagggggtaaagacctattaacc 9915652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 9923596 - 9923564
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  9923596 acctatattacagggggtaaagacctattaacc 9923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 13279441 - 13279473
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  13279441 acctatattacagggggtaaagacctattaacc 13279473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 13797635 - 13797667
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  13797635 acctatattacagggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 15037309 - 15037357
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  15037309 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 15037357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 19272473 - 19272505
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  19272473 acctatattacagggggtaaagacctattaacc 19272505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 21298044 - 21298004
Alignment:
Q  366 tatattacagggggtaaagacctattaaccttattattaat 406  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  21298044 tatattacagggggtaaagacctattaaccttttaattaat 21298004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 23371482 - 23371450
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  23371482 acctatattacagggggtaaagacctattaacc 23371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 23784617 - 23784585
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  23784617 acctatattacagggggtaaagacctattaacc 23784585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 38193218 - 38193250
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  38193218 acctatattacagggggtaaagacctattaacc 38193250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 39580190 - 39580222
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  39580190 acctatattacagggggtaaagacctattaacc 39580222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 39927791 - 39927727
Alignment:
Q  442 agggcacaagttaaggaacttaaaat-gaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    ||||||||||||||||| |||||||| |||| |||||||| ||||||  |||||| |||||||||    
T  39927791 agggcacaagttaaggagcttaaaatagaaattaaaaataaattttatattaaaaatataacttt 39927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 9553432 - 9553401
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  9553432 cctatattacagggggtaaagacctattaacc 9553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 406
Target Start/End: Original strand, 14554472 - 14554515
Alignment:
Q  363 acctatattacagggggtaaagacctattaaccttattattaat 406  Q
    |||||||||||||||||||||| |||||||||| || |||||||    
T  14554472 acctatattacagggggtaaaggcctattaaccctaatattaat 14554515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 23371662 - 23371608
Alignment:
Q  180 atcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  23371662 atcccctgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 23371608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 408
Target Start/End: Original strand, 35913310 - 35913353
Alignment:
Q  365 ctatattacagggggtaaagacctattaaccttattattaattt 408  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  35913310 ctatattacagggggtaaagacctattaaccctataatttattt 35913353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 44568881 - 44568846
Alignment:
Q  363 acctatattacagggggtaaagacctattaacctta 398  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44568881 acctatattacagggggtaaagatctattaacctta 44568846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 45163946 - 45163911
Alignment:
Q  363 acctatattacagggggtaaagacctattaacctta 398  Q
    |||||||||||| |||||||||||||||||||||||    
T  45163946 acctatattacaaggggtaaagacctattaacctta 45163911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 4518080 - 4518026
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||| |||| |||||||||||||||||||   |||||||| ||||||||||||    
T  4518080 cccttggaaaatatttttgttttgatttacccacctaataggccaaacaaaaacc 4518026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 5909717 - 5909771
Alignment:
Q  126 taataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    |||||||| |||||| | |||||||||||| ||||||| |||||| |||||||||    
T  5909717 taataggtctttaccccatgtaatataggtcatttctggtttttccccctgtaaa 5909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 13279266 - 13279316
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  13279266 tgtaaaatatttttgttttgatttacccccttaataggccaaacaaaaacc 13279316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 13279393 - 13279347
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaa 232  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||    
T  13279393 tgtaaaatatttttgttttgatttaccgccctaataggccaaacaaa 13279347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 13286840 - 13286790
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | ||||||||  |||||||||||    
T  13286840 tgtaaaatatttttgttttgatttacccccctaataggctaaacaaaaacc 13286790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 31186880 - 31186830
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||  ||||||||||||    
T  31186880 tgtaaaatatttttgttttgatttacccccctaatagaccaaacaaaaacc 31186830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 38193170 - 38193121
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  38193170 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 38193121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 39065416 - 39065386
Alignment:
Q  363 acctatattacagggggtaaagacctattaa 393  Q
    |||||||||||||||||||||||||||||||    
T  39065416 acctatattacagggggtaaagacctattaa 39065386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 19979681 - 19979652
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  19979681 tatattacagggggtaaagacctattaacc 19979652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 19979731 - 19979779
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| || ||||||| |||||||||||    
T  19979731 tgtaaaatatttttgttttgatttacccct-taataggccaaacaaaaac 19979779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 24555702 - 24555763
Alignment:
Q  120 aagggctaataggtatttacc-tcttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||| |||||||| |||||| || |||||||||||| ||||||||||||||  ||||||||    
T  24555702 aagggttaataggtctttaccctcctgtaatataggtcatttctgatttttccacctgtaaa 24555763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 24555925 - 24555962
Alignment:
Q  363 acctatattacagggggtaaagacctattaaccttatt 400  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  24555925 acctatattacagggggtaaaaacctattaaccctatt 24555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 505
Target Start/End: Complemental strand, 26776214 - 26776153
Alignment:
Q  445 gcacaagttaaggaacttaaaat-gaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    |||||||||||||| |||||||| |||| |||||||| ||||||  || |||||||||||||    
T  26776214 gcacaagttaaggagcttaaaatagaaattaaaaataaattttatattgaaagtataacttt 26776153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 27241782 - 27241749
Alignment:
Q  144 tgtaatataggttatttctgatttttctccctgt 177  Q
    |||||||||||| |||||||||||||||||||||    
T  27241782 tgtaatataggtcatttctgatttttctccctgt 27241749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 35913127 - 35913180
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||| ||||| ||  |||| |||||||||||    
T  35913127 cccttgtaaaatatttttgttttgattgacctcccttgtaggccaaacaaaaac 35913180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 43251591 - 43251639
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| || ||||||| |||||||||||    
T  43251591 tgtaaaatatttttgttttgatttacccct-taataggccaaacaaaaac 43251639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 1693434 - 1693379
Alignment:
Q  180 atcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||| ||||||||||||||||||| | |||||| | ||||||||||||    
T  1693434 atcccctgtaaaatatttttgttttgatttacc-ccctaatatgccaaacaaaaacc 1693379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 3307700 - 3307732
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||| ||||||||    
T  3307700 acctatattacagggggtaaagacttattaacc 3307732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 5766671 - 5766639
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||| ||||||||    
T  5766671 acctatattacagggggtaaagacatattaacc 5766639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 5909746 - 5909714
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||| ||||||||||||||||||||    
T  5909746 acctatattacatggggtaaagacctattaacc 5909714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 364 - 392
Target Start/End: Complemental strand, 8174916 - 8174888
Alignment:
Q  364 cctatattacagggggtaaagacctatta 392  Q
    |||||||||||||||||||||||||||||    
T  8174916 cctatattacagggggtaaagacctatta 8174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 10688491 - 10688459
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  10688491 acctatattacagagggtaaagacctattaacc 10688459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 10980620 - 10980652
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  10980620 acctatattacagagggtaaagacctattaacc 10980652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 13882636 - 13882604
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  13882636 acctatattacagagggtaaagacctattaacc 13882604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 19272424 - 19272376
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| |||||| |||||||||||| | |||||||| ||||||||||||    
T  19272424 taaaatatttttattttgatttacccccctaataggccaaacaaaaacc 19272376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 19410500 - 19410568
Alignment:
Q  113 tattattaagggctaataggtatttacctc-ttgtaatataggttatttctgatttttctccctgtaaa 180  Q
    |||||||  ||| |||||||| |||||| | ||||||||||||||||||||| |||||  |||||||||    
T  19410500 tattattttgggttaataggtctttacccccttgtaatataggttatttctggttttttcccctgtaaa 19410568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 20040991 - 20041031
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  20040991 tttttgttttgatttacccccctaataggccaaacaaaaac 20041031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 24555959 - 24555900
Alignment:
Q  121 agggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaat 181  Q
    |||| |||||||| |||||| | |||||||||||| ||||||| |||||| ||||||||||    
T  24555959 agggttaataggtttttaccccctgtaatataggtcatttctggtttttc-ccctgtaaat 24555900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 24845671 - 24845639
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||| ||||||||||||||||||    
T  24845671 acctatattacaggaggtaaagacctattaacc 24845639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 26050208 - 26050176
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  26050208 acctatattagagggggtaaagacctattaacc 26050176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 26050427 - 26050459
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  26050427 acctatattacaggggttaaagacctattaacc 26050459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 26059567 - 26059535
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  26059567 acctatattagagggggtaaagacctattaacc 26059535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 26059786 - 26059818
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  26059786 acctatattacaggggttaaagacctattaacc 26059818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 29002411 - 29002447
Alignment:
Q  144 tgtaatataggttatttctgatttttctccctgtaaa 180  Q
    ||||||||||||||||||||||||| | |||||||||    
T  29002411 tgtaatataggttatttctgattttccaccctgtaaa 29002447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 31186701 - 31186669
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  31186701 acctatattacagagggtaaagacctattaacc 31186669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 33757443 - 33757411
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||| |||||||||    
T  33757443 acctatattacagggggtaaagatctattaacc 33757411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 35913257 - 35913209
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  35913257 taaaatatttttgttttgatttacccccttaataggccaaacaaaaacc 35913209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 42202194 - 42202162
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||| |||||||||||||||||||||||    
T  42202194 acctatattgcagggggtaaagacctattaacc 42202162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 48104585 - 48104632
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  48104585 taaaatatttttgttttgatttacc-ccctaataggccaaacaaaaacc 48104632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 48104752 - 48104784
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||| ||||||||||||||||||    
T  48104752 acctatattacaggaggtaaagacctattaacc 48104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 3729 - 3776
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  3729 taaaatatttttgttttgatttacccctctaataggccaaacaaaaac 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 3593421 - 3593468
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaa 233  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  3593421 tgtaaaatatttttgttttgatttacctccctaataggtcaaacaaaa 3593468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 12321023 - 12321078
Alignment:
Q  179 aatcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    |||||| ||||||| ||||||||||||||||||| |||||||| | ||||||||||    
T  12321023 aatcccctgtaaaatatttttgttttgatttacccctctaataagtcaaacaaaaa 12321078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 24062372 - 24062322
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  24062372 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 24062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 33561934 - 33561884
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  33561934 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 33561884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 24325606 - 24325643
Alignment:
Q  198 ttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||||||||||||||||||| |||||||||||    
T  24325606 ttgttttgatttacctctctaataggccaaacaaaaac 24325643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 3063507 - 3063539
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  3063507 acctatattacagggggtaaagacctattaacc 3063539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 5953239 - 5953291
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||| |||||||||||| |||||||||||| | |||||||| ||||||||||    
T  5953239 cccttataaaacatttttattttgatttacccccctaataggtcaaacaaaaa 5953291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 10344083 - 10344051
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  10344083 acctatattacagggggtaaagacctattaacc 10344051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 13114431 - 13114399
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  13114431 acctatattacagggggtaaagacctattaacc 13114399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 14328670 - 14328702
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  14328670 acctatattacagggggtaaagacctattaacc 14328702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 14421680 - 14421712
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  14421680 acctatattacagggggtaaagacctattaacc 14421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 24387785 - 24387817
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  24387785 acctatattacagggggtaaagacctattaacc 24387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 29942467 - 29942499
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  29942467 acctatattacagggggtaaagacctattaacc 29942499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Original strand, 56137 - 56168
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  56137 cctatattacagggggtaaagacctattaacc 56168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 5605398 - 5605351
Alignment:
Q  442 agggcacaagttaaggaacttaaaat-gaaaataaaaatatattttaa 488  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||    
T  5605398 agggcacaagttaaggaacttaaaatggaaattaaaaataaattttaa 5605351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 13639584 - 13639639
Alignment:
Q  180 atcccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    |||||||||| ||  |||||||||||||| ||| |||||||||| |||||||||||    
T  13639584 atcccttgtagaaattttttgttttgattaacccctctaataggccaaacaaaaac 13639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 24325707 - 24325668
Alignment:
Q  197 tttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  24325707 tttgttttgatttacctccctaataggccaaacaaaaacc 24325668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 29383932 - 29383991
Alignment:
Q  446 cacaagttaaggaacttaaaatgaaaataaaaatatattttaacttaaaagtataacttt 505  Q
    |||||||||||||  ||||||||||||| |||||| ||||||  || |||||||||||||    
T  29383932 cacaagttaaggagtttaaaatgaaaattaaaataaattttatattgaaagtataacttt 29383991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 30381599 - 30381564
Alignment:
Q  363 acctatattacagggggtaaagacctattaacctta 398  Q
    |||||||||||||||| |||||||||||||||||||    
T  30381599 acctatattacaggggataaagacctattaacctta 30381564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 1319196 - 1319245
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  1319196 tgtaaaatatttttgttttgatttacc-ccctaataggtcaaacaaaaacc 1319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 9286283 - 9286333
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||| ||| |||||| | ||||||||||||    
T  9286283 tgtaaaatatttttgttttgatttatctccctaatatgccaaacaaaaacc 9286333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 12321234 - 12321192
Alignment:
Q  126 taataggtatttacctcttgtaatataggttatttctgatttt 168  Q
    |||||||| |||||||| ||||||||||||||||| |||||||    
T  12321234 taataggtctttacctcctgtaatataggttatttttgatttt 12321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 13357563 - 13357513
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| ||||||||||||||||||  | |||||||| ||||||||||||    
T  13357563 tgtaaaatatttttgttttgatttacgcccctaataggccaaacaaaaacc 13357513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 13639516 - 13639566
Alignment:
Q  129 taggtatttacctcttgtaatataggttatttctgatttttctccctgtaa 179  Q
    ||||| |||||| | |||||||||||| ||||||||||||||| |||||||    
T  13639516 taggtctttaccccctgtaatataggtcatttctgatttttcttcctgtaa 13639566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 395
Target Start/End: Original strand, 22574056 - 22574086
Alignment:
Q  365 ctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||    
T  22574056 ctatattacagggggtaaagacctattaacc 22574086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 34715928 - 34715962
Alignment:
Q  363 acctatattacagggggtaaagacctattaacctt 397  Q
    ||||||||||||||||||||||| |||||||||||    
T  34715928 acctatattacagggggtaaagaactattaacctt 34715962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 13357444 - 13357485
Alignment:
Q  194 atttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||||||| | |||||||| |||||||||||    
T  13357444 atttttgttttgatttacccccctaataggccaaacaaaaac 13357485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 29942425 - 29942372
Alignment:
Q  183 ccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||| ||||| |||||| |||||||||||| | |||||||| ||||||||||||    
T  29942425 ccttttaaaatatttttattttgatttacccccctaataggccaaacaaaaacc 29942372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 30381760 - 30381723
Alignment:
Q  198 ttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  30381760 ttgttttgatttacccctctaataggccaaacaaaaac 30381723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 7922350 - 7922318
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  7922350 acctatattacaggggataaagacctattaacc 7922318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 12321157 - 12321109
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaa 234  Q
    ||||||| ||||||||||||||||||| | ||||| || ||||||||||    
T  12321157 tgtaaaatatttttgttttgatttacccccctaattggccaaacaaaaa 12321109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 366 - 394
Target Start/End: Original strand, 13114652 - 13114680
Alignment:
Q  366 tatattacagggggtaaagacctattaac 394  Q
    |||||||||||||||||||||||||||||    
T  13114652 tatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 13639542 - 13639510
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||| |||||    
T  13639542 acctatattacagggggtaaagacctactaacc 13639510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 22366242 - 22366274
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||| |||||||||||||||||||||||    
T  22366242 acctatattgcagggggtaaagacctattaacc 22366274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 22573835 - 22573803
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  22573835 acctatattatagggggtaaagacctattaacc 22573803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 23270233 - 23270265
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  23270233 acctatattaaagggggtaaagacctattaacc 23270265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 23582343 - 23582386
Alignment:
Q  126 taataggtatttacctcttgtaatataggttatttctgatttttc 170  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||    
T  23582343 taataggtctttacc-cttgtaatataggttatttatgatttttc 23582386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 24062200 - 24062168
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||| ||||||||||||||||||||||    
T  24062200 acctatattatagggggtaaagacctattaacc 24062168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 31851791 - 31851759
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||| ||||||||||||||||    
T  31851791 acctatattacaggggataaagacctattaacc 31851759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 34762181 - 34762241
Alignment:
Q  121 agggctaataggtatttacctcttgtaatataggttatttctgatttttctccctgtaaat 181  Q
    ||||||||||||| |||||||| |||||||||||  | || || |||| ||||||||||||    
T  34762181 agggctaataggtctttacctcctgtaatatagggcacttttggttttgctccctgtaaat 34762241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 3847 - 3897
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||||||||    
T  3847 tgtaaaatatttttgttttgatttacctccataataggccaaacaaaaacc 3897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 396
Target Start/End: Original strand, 4023 - 4054
Alignment:
Q  365 ctatattacagggggtaaagacctattaacct 396  Q
    ||||||||||||||||||||||||||||||||    
T  4023 ctatattacagggggtaaagacctattaacct 4054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3974 - 3926
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  3974 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 3926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8071 - 8022
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  8071 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 8022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 7889 - 7860
Alignment:
Q  366 tatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||    
T  7889 tatattacagggggtaaagacctattaacc 7860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 7944 - 7992
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  7944 taaaatatttttgttttgatttacccccataataggtcaaacaaaaacc 7992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 8119 - 8151
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  8119 acctatattacagtgggtaaagacctattaacc 8151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 4175 - 4207
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  4175 acctatattacagggggtaaagacctattaacc 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 4006 - 4047
Alignment:
Q  195 tttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||    
T  4006 tttttgttttgatttacccccctaataggccaaacaaaaacc 4047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 4451 - 4483
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  4451 acctatattacagggggtaaagacctattaacc 4483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4406 - 4357
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| | ||||||||||||||||| | |||||||| |||||||||||    
T  4406 tgtaaaataattttgttttgatttacccccctaataggccaaacaaaaac 4357  T

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Target: scaffold0384; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 4282 - 4250
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||| |||||||||||||||||    
T  4282 acctatattacagggagtaaagacctattaacc 4250  T

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Target: scaffold0142 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 34850 - 34882
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  34850 acctatattacagggggtaaagacctattaacc 34882  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 91083 - 91051
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  91083 acctatattacagggggtaaagacctattaacc 91051  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 1860 - 1828
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  1860 acctatattacagggggtaaagacctattaacc 1828  T

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Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 2036 - 1984
Alignment:
Q  184 cttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||||||| ||||||||||||||||||| | ||||||||  |||||||||||    
T  2036 cttgtaaaatatttttgttttgatttacccccctaataggctaaacaaaaacc 1984  T

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Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1905 - 1954
Alignment:
Q  182 cccttgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||| ||||||||||||||||||    |||||||| |||||||||||    
T  1905 cccttgtaaaatatttttgttttgatttac----ctaataggccaaacaaaaac 1954  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 26341 - 26309
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    |||||||||||||||||||||||||||||||||    
T  26341 acctatattacagggggtaaagacctattaacc 26309  T

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Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 26509 - 26461
Alignment:
Q  188 taaaacatttttgttttgatttacctctctaatagggcaaacaaaaacc 236  Q
    ||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  26509 taaaatatttttgttttgatttacccccctaataggccaaacaaaaacc 26461  T

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Target: scaffold0250 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 10112 - 10081
Alignment:
Q  364 cctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||||||||||||||||||||||    
T  10112 cctatattacagggggtaaagacctattaacc 10081  T

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Target: scaffold0727 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 913 - 961
Alignment:
Q  186 tgtaaaacatttttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  913 tgtaaaatatttttgttttgatttacc-ccctaataggccaaacaaaaac 961  T

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Target: scaffold0727; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 1201 - 1145
Alignment:
Q  120 aagggctaataggtatttacctcttgtaatataggttatttctgatttttctccctg 176  Q
    ||||| |||||||| |||| | |||||||||||||| ||||||| |||||| |||||    
T  1201 aagggttaataggtctttatcccttgtaatataggtcatttctggtttttccccctg 1145  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 399
Target Start/End: Complemental strand, 44421 - 44388
Alignment:
Q  366 tatattacagggggtaaagacctattaaccttat 399  Q
    ||||||||| ||||||||||||||||||||||||    
T  44421 tatattacaaggggtaaagacctattaaccttat 44388  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 158232 - 158195
Alignment:
Q  198 ttgttttgatttacctctctaatagggcaaacaaaaac 235  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  158232 ttgttttgatttacccctctaataggccaaacaaaaac 158195  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 660 - 692
Alignment:
Q  363 acctatattacagggggtaaagacctattaacc 395  Q
    ||||||||||||| |||||||||||||||||||    
T  660 acctatattacagagggtaaagacctattaacc 692  T

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