View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3520_low_23 (Length: 251)
Name: NF3520_low_23
Description: NF3520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3520_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 26466698 - 26466866
Alignment:
| Q |
1 |
aaaatgacactagttaattggtaatcttggatcccctgacccctacagagtttgtcagaagcactataatacaacaatgctcggttgaacaacatttatt |
100 |
Q |
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| T |
26466698 |
aaaatgacactagttaatttgtaatcttggatcccctgacccctacagagtttgtcagaatcactacaatacaacaatgctcggttgaacaacatttatt |
26466797 |
T |
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| Q |
101 |
ccacattctacaaaattaatcatactagttaattattcatctaaacttagagatttgcttgcctatatttga |
172 |
Q |
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|||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| ||||||||| |
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| T |
26466798 |
ccacattctacaaaataaatca---taattaattattcatctaaacttagagatttgattgcttatatttga |
26466866 |
T |
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