View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3521_low_12 (Length: 249)
Name: NF3521_low_12
Description: NF3521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3521_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 44956429 - 44956662
Alignment:
| Q |
1 |
ctttgaatatttcaatagaataacagtggtgggaaaccaggtgaagatgtgtatgatcaaaaaatggtgaacaaggtaatgcacactctttcttgaaaat |
100 |
Q |
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| T |
44956429 |
ctttgaatatttcaatagaataacagtggtgggaaaccaggtgaagatgtgtatgatcaaaaaatggtgaacaaggtaatgcacactctttcttgaaaat |
44956528 |
T |
|
| Q |
101 |
ttggttacatatatagaagttgcaattgaggaatcaagggacttgtaagttatgaaagttgaggaatttcagtgtgttcttttgaagctcagaaacaacg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
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| T |
44956529 |
ttggttacatatatagaagttgcaattgaggaatcaagggacttgtaagttatgaaagttgaggaatttcagtgtgttctttggaagctcataaacaacg |
44956628 |
T |
|
| Q |
201 |
agtcttggagagaaacaaagaatgtgttatatat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
44956629 |
agtcttggagagaaacaaagaatgtgttatatat |
44956662 |
T |
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