View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3522_high_3 (Length: 237)
Name: NF3522_high_3
Description: NF3522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3522_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 42546605 - 42546391
Alignment:
| Q |
1 |
aatgtaaggaaagtcaaatgttagtgatcattcaagtaattgaatggtttattgtttattgatgtaatgttccaatatattgaatcagcaatcatgcctt |
100 |
Q |
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| T |
42546605 |
aatgtaaggaaagtcaaatgttagtgatcattcaagtaattgaatggtttattgtttattgatgtaatgttccaatatattgaatcagcgatcatgcctt |
42546506 |
T |
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| Q |
101 |
tagcttgacaattatacacggaacaatggatattttagaagagtgatattcttgatgtggaactgataaaatatcaaagtcatattttctatgaaattta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42546505 |
tagcttgacaattatacacggaacaatggatattttagaagagtgatattcttgatgtggaactgataaaatatcaaagtcatattttctatgaaattta |
42546406 |
T |
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| Q |
201 |
catgtacgtagacga |
215 |
Q |
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| ||||||||||||| |
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| T |
42546405 |
cgtgtacgtagacga |
42546391 |
T |
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