View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3526_high_43 (Length: 236)
Name: NF3526_high_43
Description: NF3526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3526_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 36403685 - 36403478
Alignment:
| Q |
14 |
ttatatacttctctcgagatgttacaccatatgatatgtacaccaattattatccttatttatttttataaaaaatcttgatattttcacatcaatccta |
113 |
Q |
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| T |
36403685 |
ttatatacttctctcgagatgttacaccatatgatatgtacaccaattattatccttatttatttttataaaaaatcttgatattttcacatcaatccta |
36403586 |
T |
|
| Q |
114 |
gtctgcctttactttaattaattattgtcattgtattaagttgtacaataataatgtagactttttatatttctttagagcctcttaagtctccttttcc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
36403585 |
gtctgcctttactttaattaattattgtcattgtattaagttgtacaataataatgtagactttttatatttctttagagcctcttaagtttccttttcc |
36403486 |
T |
|
| Q |
214 |
atctttct |
221 |
Q |
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|||||||| |
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| T |
36403485 |
atctttct |
36403478 |
T |
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