View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3526_low_26 (Length: 287)
Name: NF3526_low_26
Description: NF3526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3526_low_26 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 9699876 - 9699620
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9699876 |
aggagcagtgacttcatgcacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
9699777 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9699776 |
gatttacaactttgcttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgctaa |
9699677 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9699676 |
actcatcaacaaaactgatgaaatacttgttttcccctaatgaaggaacctctaaag |
9699620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 43552089 - 43551833
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43552089 |
aggagcagtgacttcatacacaatgccattgtcttcataaaatttctcaaacacctttgaggtatactcaccaccaccattagttcttaaaatcttaatg |
43551990 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
43551989 |
gatttaccactttgattttccactaagattttaaacttctgaaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctactaa |
43551890 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
43551889 |
actcatcaacaaaactgatgaaatacttgttgccccctaatgaagaaacctttaaag |
43551833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 269
Target Start/End: Original strand, 54169706 - 54169960
Alignment:
| Q |
15 |
gagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgga |
114 |
Q |
| |
|
|||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
54169706 |
gagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatgga |
54169805 |
T |
|
| Q |
115 |
tttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaac |
214 |
Q |
| |
|
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
54169806 |
tttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaaac |
54169905 |
T |
|
| Q |
215 |
tcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
54169906 |
tcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
54169960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 44 - 223
Target Start/End: Original strand, 53356574 - 53356753
Alignment:
| Q |
44 |
tcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagattt |
143 |
Q |
| |
|
||||||||||| || ||||||||||| || |||||||||||| |||||||||||||||||||||||| || || |||||||||||||| | ||||||| |
|
|
| T |
53356574 |
tcttcacaaaacttttcaaacaccttcgaagtatactcaccatcaccatcagttcttaaaatcttaaaagactttccactttgcttttctatcaagattt |
53356673 |
T |
|
| Q |
144 |
taaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaactcatcaaca |
223 |
Q |
| |
|
||||||||| ||||| | ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
53356674 |
taaacttctaaaacattttaaatgcttcgcttttggccttaatcaaatacaaccagagttttctgctaaactcatcaaca |
53356753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 22929692 - 22929818
Alignment:
| Q |
39 |
cattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaa |
138 |
Q |
| |
|
|||| ||||||||||| |||||||| |||||| |||||||| ||||| ||||||||||||||| || |||| |||||||||||||| ||||| || || |
|
|
| T |
22929692 |
cattttcttcacaaaacttctcaaaaacctttatagtatactctccacctccatcagttcttaaactcgtaatagatttaccactttgtttttctacaaa |
22929791 |
T |
|
| Q |
139 |
gattttaaacttctggaacatatcaaa |
165 |
Q |
| |
|
|| || ||||||||||| |||||||| |
|
|
| T |
22929792 |
gaacttgaacttctggaatatatcaaa |
22929818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 32370333 - 32370414
Alignment:
| Q |
71 |
gaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagattttaaacttct |
152 |
Q |
| |
|
||||||||||| ||||||||||||||||| || |||||||| ||||| |||||| || || |||||||| ||||| |||| |
|
|
| T |
32370333 |
gaggtatactctccaccaccatcagttctcaagatcttaattgatttttcactttctttctcaactaagatcttaaatttct |
32370414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 35952792 - 35953047
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35952792 |
aggagcagtgacttcatgcacaatgtcattgtcttcacaaaacttctcaaacacctttgaggtatactccccaccaccatcagttcttaaaatcttaatg |
35952891 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35952892 |
gatttaccactttgattttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataaacagagttttctgctaa |
35952991 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaa |
268 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
35952992 |
actcatcaacaaaactgatgaaatatttgtttccccctaatgaaggaacctctaaa |
35953047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 8053189 - 8052933
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8053189 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
8053090 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
8053089 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
8052990 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
8052989 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
8052933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 36672848 - 36672592
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36672848 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
36672749 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
36672748 |
gatttaccactctgtttttcaactaagattttaaacttttggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
36672649 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
36672648 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
36672592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 27403485 - 27403694
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||| |||||| |||| ||||||||||| |||||||| ||||||||||||||| | || ||||||| |||||||||||||||| |
|
|
| T |
27403485 |
aggagcagtgacttcaatgacaatgccattatcttcacaaaaattctcaaatacctttgaggtatac---ctacaaccatcaattcttaaaatcttaata |
27403581 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|| || |||||||||||||| ||| ||||||| |||||||| || || |||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
27403582 |
gactttccactttgcttttctacttagattttgaacttctgaaagatttcaaatgcttcacttttggccttaatcagatataaccagagttttctgctaa |
27403681 |
T |
|
| Q |
213 |
actcatcaacaaa |
225 |
Q |
| |
|
||||||||||||| |
|
|
| T |
27403682 |
actcatcaacaaa |
27403694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 300009 - 299931
Alignment:
| Q |
66 |
cctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagatttt |
144 |
Q |
| |
|
||||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||||| |||||| ||| ||||||| |
|
|
| T |
300009 |
cctttgatgtatactcacctccaccattcgtcgtcaaaatcttaatagatttatcactttccttttctactgagatttt |
299931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 27759194 - 27758938
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27759194 |
aggagcagtgacttcatgtacaatgtcattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
27759095 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27759094 |
gatttaccactttgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgctaa |
27758995 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
27758994 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
27758938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 7942443 - 7942699
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7942443 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
7942542 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
7942543 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
7942642 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
7942643 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
7942699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 30429477 - 30429273
Alignment:
| Q |
15 |
gagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgga |
114 |
Q |
| |
|
|||||| |||||| ||||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30429477 |
gagcagtgacttcctgcacaatgccactgtcttcacaaaacttcttaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgga |
30429378 |
T |
|
| Q |
115 |
tttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaac |
214 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30429377 |
tttaccactttgtttttccactaagattttaaacttctgaaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgctaaac |
30429278 |
T |
|
| Q |
215 |
tcatc |
219 |
Q |
| |
|
||||| |
|
|
| T |
30429277 |
tcatc |
30429273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 82 - 269
Target Start/End: Original strand, 13841624 - 13841804
Alignment:
| Q |
82 |
accaccaccatcagttcttaaaatcttaatggatttaccactttgcttttcc-actaagattttaaacttctggaacatatcaaatgcttcacttttggc |
180 |
Q |
| |
|
||||||||||| ||||||||||| |||||| ||||| ||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
13841624 |
accaccaccattagttcttaaaaccttaatagattttccactttgctttttctactaagattttaaacttctgaaacacttcaaatgcttcacttttggc |
13841723 |
T |
|
| Q |
181 |
cttaatcaaatataatcagagttttctgctaaactcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||| ||| |||||||||||||||||| || ||||| |||| |||||||||| |||||||| |
|
|
| T |
13841724 |
tttaatcaaatataaccagagttt--------actaatcaacaaaattgatgaagtatttgttaacccccaatgaaggaatctctaaag |
13841804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 35896391 - 35896313
Alignment:
| Q |
66 |
cctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagatttt |
144 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||| ||||||||||| |||||| |||||| ||||| ||| ||||||| |
|
|
| T |
35896391 |
cctttgatgtatactcacctccaccatctgttctcaaaatcttaatagatttatcactttcattttctactgagatttt |
35896313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 13830464 - 13830534
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcac |
83 |
Q |
| |
|
|||||||| ||||||||||||||| ||| ||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
13830464 |
aggagcagtgacttcatgcacaatactattatcttcacaaaacttttcaaacatttttgaggtatactcac |
13830534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 43089098 - 43089020
Alignment:
| Q |
66 |
cctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagatttt |
144 |
Q |
| |
|
||||||| ||||||||||| ||||| || || || ||||||||||| |||||| |||||| |||||| ||| ||||||| |
|
|
| T |
43089098 |
cctttgatgtatactcacctccaccgtctgtcctcaaaatcttaatagatttatcactttccttttctactgagatttt |
43089020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 30697593 - 30697337
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30697593 |
aggagcagtgacttcatgcacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
30697494 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30697493 |
gatttaccactttgtttttcaactaagattttaaacttctagaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgctaa |
30697394 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
30697393 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
30697337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 40369608 - 40369863
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40369608 |
aggagcagtgacttcatgcacaatgtcgttgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
40369707 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
40369708 |
gatttaccactttgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgctaa |
40369807 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
40369808 |
actcatcaacaaaactgatgaaatatttgtt-tcccctaatgaaggaacttctaaag |
40369863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 13 - 266
Target Start/End: Complemental strand, 12021086 - 12020833
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12021086 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
12020987 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
12020986 |
gatttaccactttgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
12020887 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctcta |
266 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
12020886 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctcta |
12020833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 13 - 266
Target Start/End: Complemental strand, 37679833 - 37679580
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37679833 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
37679734 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
37679733 |
gatttaccactttgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
37679634 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctcta |
266 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
37679633 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctcta |
37679580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 16796466 - 16796210
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16796466 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
16796367 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
16796366 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
16796267 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
16796266 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
16796210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 7101734 - 7101990
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7101734 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
7101833 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |
|
|
| T |
7101834 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggcattgatcaaatataaccagagttttctgctaa |
7101933 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
7101934 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
7101990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 269
Target Start/End: Original strand, 15064728 - 15064944
Alignment:
| Q |
53 |
aatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagattttaaacttct |
152 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||| |||| ||||||||| ||||||| ||| || |||| |
|
|
| T |
15064728 |
aatttctaaaacacctttgaagtatactcaccacctccatcagttctcaaaatcttaaaagattttccaccttgcttttctactaagactttgaatttct |
15064827 |
T |
|
| Q |
153 |
ggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaactcatcaacaaaattgatgaaatacttgttgccccctaa |
252 |
Q |
| |
|
|| |||||||| || ||| | || | || || || ||||| || | ||| |||||||| ||||| || ||| |||||||||||||||| || ||||| |
|
|
| T |
15064828 |
aaaatatatcaaaagcatcattctttactttgattaagtataaccaaattttcctgctaaattcatctacgaaactgatgaaatacttgtttccacctaa |
15064927 |
T |
|
| Q |
253 |
tgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||| ||| |||| |
|
|
| T |
15064928 |
tgaaggaaactccaaag |
15064944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 50630291 - 50630547
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
50630291 |
aggagcagtgacttcatgcacaatgccattgtcttcacgaaacttctcaaacacctttgaggtatactcaccaccactatcagttcttaaaatcttaatg |
50630390 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
50630391 |
gatttaccactttgtttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggtcttaatcaaatataaccagagttttctgctaa |
50630490 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
50630491 |
actcatcaacaaaactgatgaaatatttgttgccccttaatgaaggaacctctaaag |
50630547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 27188435 - 27188177
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaa-tcttaat |
111 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27188435 |
aggagcagtgacttcatgcacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaaatcttaat |
27188336 |
T |
|
| Q |
112 |
ggatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgcta |
211 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27188335 |
ggatttacaactttgcttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgcta |
27188236 |
T |
|
| Q |
212 |
aactcatcaac-aaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27188235 |
aactcatcaacaaaaactgatgaaatacttgttttcccctaatgaaggaacctctaaag |
27188177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 31356959 - 31356703
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31356959 |
aggagcagtgacttcatgcacaacaccattgtcttcacaaaaattctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
31356860 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
31356859 |
gatttaccactttgcttttccactaaaatattaaacttatggaacatatcaaatgcttcacttttggccttaatcaagtataaccagagttttatgctaa |
31356760 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
31356759 |
actcatcaacaaaactgatgaaatatttgttgccccctaatgaaggaacctataaag |
31356703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 44149355 - 44149099
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44149355 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
44149256 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
44149255 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
44149156 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
44149155 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
44149099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 50934078 - 50934004
Alignment:
| Q |
66 |
cctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaaga |
140 |
Q |
| |
|
||||||||||||||||||| |||||||| || || ||||||||||| |||||| |||||| |||||| ||||||| |
|
|
| T |
50934078 |
cctttgaggtatactcacctccaccatctgtcctcaaaatcttaatagatttatcactttccttttctactaaga |
50934004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 25172383 - 25172318
Alignment:
| Q |
75 |
tatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaaga |
140 |
Q |
| |
|
||||| |||| |||||||| ||||| ||||||||||||||||| |||||| | | |||||||||| |
|
|
| T |
25172383 |
tatacccacctccaccatctgttctcaaaatcttaatggatttgtcactttccatctccactaaga |
25172318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 47225 - 47481
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
47225 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
47324 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
47325 |
gatttaccactttgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataaccagagttttctgctaa |
47424 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
47425 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
47481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 1289122 - 1288866
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1289122 |
aggagcagtgacttcatgtacaatgtcattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatattaatg |
1289023 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
1289022 |
gatttacgcctttgcttttccactaagattttaaacttctagaacatatcaaatgcttcacttttggccttaatcaaatataaccatagttttctgctaa |
1288923 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
1288922 |
actcatcaacaaaattgatgaaatatttattgccccctaataaaggaacctctaaag |
1288866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 30408163 - 30408419
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30408163 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
30408262 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
30408263 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
30408362 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
30408363 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
30408419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 43809843 - 43810099
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43809843 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
43809942 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
43809943 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
43810042 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
43810043 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
43810099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 200044 - 200300
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
200044 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
200143 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
200144 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
200243 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
200244 |
actcatcaacgaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
200300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 314881 - 315137
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
314881 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
314980 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
314981 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
315080 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
315081 |
actcatcaacgaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
315137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 41947612 - 41947356
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41947612 |
aggaacagtgacttcatgcacaatgtcattgtcttcttaaaacttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
41947513 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
41947512 |
gatttaccactttgcttttccattaaaattttaaacttctagaacatatcaaatgtttcacttttggccttaatcaaatataaccagagttttctgctga |
41947413 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
41947412 |
actcatcaacaaagctgatgaagtatttgttgccccctaatgaaggaacctctaaag |
41947356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 264
Target Start/End: Original strand, 17784243 - 17784493
Alignment:
| Q |
14 |
ggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgg |
113 |
Q |
| |
|
||||||| |||||||| || |||||||||| ||||||||| ||||||||||| ||||| |||||||| ||||| | ||||||||| ||||||||||| | |
|
|
| T |
17784243 |
ggagcagtcacttcatgaactatgtcattgttttcacaaaacttctcaaacacttttgaagtatactctccaccccaatcagttctcaaaatcttaatag |
17784342 |
T |
|
| Q |
114 |
atttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaa |
213 |
Q |
| |
|
|||| |||||||||||||| ||||||| ||| || |||| || |||||||| || ||| | || || || || | ||||| || | ||| || ||||| |
|
|
| T |
17784343 |
attttccactttgcttttctactaagactttgaatttctaaaatatatcaaaagcatcattctttgctttgattaggtataaccaaattttcctactaaa |
17784442 |
T |
|
| Q |
214 |
ctcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctc |
264 |
Q |
| |
|
|||| |||||| |||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
17784443 |
ttcatttacaaaactgatgaaatacttgtttccccctaataaaggaacctc |
17784493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 2124052 - 2123974
Alignment:
| Q |
95 |
gttcttaaaatcttaatggatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcac |
173 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||| |
|
|
| T |
2124052 |
gttcttaaaaccttaatggatttaccactttacttttccactaaaattttaaacttctggaatatatcaactgcttcac |
2123974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 18193211 - 18193105
Alignment:
| Q |
71 |
gaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgctt |
170 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||| ||||| |||| | ||| || |||||||| |||||||||| ||| | || || |||| |
|
|
| T |
18193211 |
gaggtatactctccaccaccatccgttcttaagatcttaattgatttttcactctccttctcaactaagatcttaaacttcttgaatacttctaaagctt |
18193112 |
T |
|
| Q |
171 |
cactttt |
177 |
Q |
| |
|
||||||| |
|
|
| T |
18193111 |
cactttt |
18193105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 37789071 - 37789149
Alignment:
| Q |
66 |
cctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagatttt |
144 |
Q |
| |
|
||||||| ||||||||||| |||||||| || || ||||||||||| |||||| |||||| |||||| ||| ||||||| |
|
|
| T |
37789071 |
cctttgatgtatactcacctccaccatctgtcctcaaaatcttaatagatttatcactttccttttctactgagatttt |
37789149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 269
Target Start/End: Original strand, 17888990 - 17889244
Alignment:
| Q |
15 |
gagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgga |
114 |
Q |
| |
|
|||||| |||||| ||||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17888990 |
gagcagtgacttcctgcacaatgccactgtcttcacaaaacttcttaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgga |
17889089 |
T |
|
| Q |
115 |
tttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaac |
214 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| |
|
|
| T |
17889090 |
tttaccactttgtttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatacaaccacagttttctgctaaac |
17889189 |
T |
|
| Q |
215 |
tcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17889190 |
tcatcaacaaaaatgatgaaatatttgttgccccctaatgaaggaacctctaaag |
17889244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 8317864 - 8318120
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8317864 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
8317963 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
8317964 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
8318063 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
8318064 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
8318120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 27570091 - 27570347
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
27570091 |
aggagcagtgacttcatgcacgatgccattgtcttcacaaaacttctcaaacacctttgaggtatactcaccaccaccattagttcttaaaaacttaatg |
27570190 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27570191 |
gatttaccactttgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatatagccagagttttctgctaa |
27570290 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
27570291 |
actcatcaacaaaactgatgaaatatttatttcctcctaatgaaggaacctctaaag |
27570347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 17161892 - 17161636
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
17161892 |
aggagcagtgacttcatgcacaataccattatcttcacaaaacttctcaaacacctttgaggtatactcacgaccaccatcagttcttaaaatcttaata |
17161793 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
|| || |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||||| |
|
|
| T |
17161792 |
gactttccactttgcttttcaactaagattttaaacttctgaaacatttcaaatgcttcacttttggccttaataaaaaataaccagagttttctgctaa |
17161693 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||| |||| ||||||| || |||||||| |||||||||||||||| ||||| |
|
|
| T |
17161692 |
actcatcatcaaagctgatgaagtatttgttgcctcctaatgaaggaacctataaag |
17161636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 31926996 - 31927251
Alignment:
| Q |
14 |
ggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatgg |
113 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | |
|
|
| T |
31926996 |
ggagcagttacttcatgtacaataccattgtcttcacaaaatttctcaaacacctttgaggtctactcaccaccaccatcagttcttaaaaccttaatag |
31927095 |
T |
|
| Q |
114 |
atttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaaa |
213 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| || |||| |
|
|
| T |
31927096 |
attttccactttgcttttctactaagatttttaacttctgaaacatatcaaatgcttcactcttggccttaatcaaatataaccagagtttcgtgttaaa |
31927195 |
T |
|
| Q |
214 |
ctcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||| |||||||| |||||||||||| |
|
|
| T |
31927196 |
ttcatcaacaaagctgatgaagtacttgttacccgctaatgaatgaacctctaaag |
31927251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 96 - 269
Target Start/End: Original strand, 15500636 - 15500809
Alignment:
| Q |
96 |
ttcttaaaatcttaatggatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataa |
195 |
Q |
| |
|
|||||||||||||||| |||| |||| ||| ||||| |||| || ||| || | ||| |||||||||||||||||||| || |||||||||| ||| || |
|
|
| T |
15500636 |
ttcttaaaatcttaatagattctccacattgtttttctactacgactttgaagtactgaaacatatcaaatgcttcactcttagccttaatcagatacaa |
15500735 |
T |
|
| Q |
196 |
tcagagttttctgctaaactcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||| || ||||| | |||||||||||||||||||||| |
|
|
| T |
15500736 |
tcagatttttctgctaaactcatcaacaaaactgatgaagtatttgttttcgcctaatgaaggaacctctaaag |
15500809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 269
Target Start/End: Complemental strand, 23255798 - 23255585
Alignment:
| Q |
57 |
tctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagattttaaacttctggaa |
156 |
Q |
| |
|
|||||||||||||||| |||| || ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||| ||| || ||||| || |
|
|
| T |
23255798 |
tctcaaacacctttgaattatagtccccacctccatcggttctcaaaatcttaatagattttccactttgcttttctactaagactttgaatttctgaaa |
23255699 |
T |
|
| Q |
157 |
catatcaaatgcttcacttttggccttaatcaaatataatcagagttttc-tgctaaactcatcaacaaaattgatgaaatacttgttgccccctaatga |
255 |
Q |
| |
|
|||||||| || |||||||| || || || | |||||| || | ||||| ||||||| ||||| ||||| |||||||||| |||| |||||||||| |
|
|
| T |
23255698 |
tatatcaaaagcatcactttttgctttgattagatataaacatatttttcatgctaaattcatctacaaagcagatgaaatacatgtttacccctaatga |
23255599 |
T |
|
| Q |
256 |
aggaacctctaaag |
269 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
23255598 |
aggaacctccaaag |
23255585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 26313810 - 26313554
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26313810 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
26313711 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
26313710 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
26313611 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
26313610 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
26313554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 39796192 - 39795936
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatg |
112 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39796192 |
aggagcagtgacttcatgtacaatgccattgtcttcacaaaacttctcaaacacctttgaggtatactctccaccaccatcagttcttaaaatcttaatg |
39796093 |
T |
|
| Q |
113 |
gatttaccactttgcttttccactaagattttaaacttctggaacatatcaaatgcttcacttttggccttaatcaaatataatcagagttttctgctaa |
212 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
39796092 |
gatttaccactctgtttttcaactaagattttaaacttctggaacatatcaaatgcttcacttttggccttgatcaaatataaccagagttttctgctaa |
39795993 |
T |
|
| Q |
213 |
actcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
39795992 |
actcatcaacaaaactgatgaaatatttgtttcctcctaatgaaggaacctctaaag |
39795936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 43594025 - 43594103
Alignment:
| Q |
13 |
aggagcagagacttcatgcacaatgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccacca |
91 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43594025 |
aggagcagtgacttcatgcacaatgtcattgtcttcacaaaacttctcaaacacctttgaggtatactccccaccacca |
43594103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 43594102 - 43594174
Alignment:
| Q |
197 |
cagagttttctgctaaactcatcaacaaaattgatgaaatacttgttgccccctaatgaaggaacctctaaag |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
43594102 |
cagagttttctgctaaactcatcaacaaaactgatgaaatacttgctgccccctaatgaaggaacctctaaag |
43594174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 30643382 - 30643277
Alignment:
| Q |
35 |
atgtcattgtcttcacaaaatttctcaaacacctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttcca |
134 |
Q |
| |
|
|||||||||||||||||||| |||||||| | ||||| |||||||| |||| |||| ||||| |||| |||||| ||||||||||||| |||||| | |
|
|
| T |
30643382 |
atgtcattgtcttcacaaaacttctcaaaaaattttgaagtatactccccactctcatcggttctcaaaaccttaatagatttaccacttttcttttcta |
30643283 |
T |
|
| Q |
135 |
ctaaga |
140 |
Q |
| |
|
|||||| |
|
|
| T |
30643282 |
ctaaga |
30643277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 44539548 - 44539626
Alignment:
| Q |
66 |
cctttgaggtatactcaccaccaccatcagttcttaaaatcttaatggatttaccactttgcttttccactaagatttt |
144 |
Q |
| |
|
||||||| ||||||||||| |||||||| || || ||||||||||| |||||| |||||| |||||| ||| ||||||| |
|
|
| T |
44539548 |
cctttgatgtatactcacctccaccatctgtcctcaaaatcttaatagatttatcactttccttttctactgagatttt |
44539626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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