View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3526_low_7 (Length: 518)

Name: NF3526_low_7
Description: NF3526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3526_low_7
NF3526_low_7
[»] chr6 (33 HSPs)
chr6 (17-515)||(5685150-5685644)
chr6 (191-323)||(14936452-14936584)
chr6 (195-330)||(26602319-26602454)
chr6 (192-326)||(11572141-11572275)
chr6 (193-326)||(6330115-6330248)
chr6 (196-326)||(2830335-2830465)
chr6 (196-326)||(8382969-8383099)
chr6 (194-326)||(13853591-13853723)
chr6 (195-326)||(8099530-8099661)
chr6 (195-329)||(9644693-9644827)
chr6 (195-329)||(9650710-9650844)
chr6 (189-318)||(6068931-6069062)
chr6 (194-326)||(35030999-35031131)
chr6 (195-326)||(33052793-33052924)
chr6 (196-326)||(8417793-8417923)
chr6 (212-297)||(4251338-4251423)
chr6 (193-326)||(6068566-6068699)
chr6 (193-263)||(3788100-3788170)
chr6 (188-290)||(28747126-28747228)
chr6 (195-240)||(8417879-8417924)
chr6 (211-326)||(6143554-6143669)
chr6 (282-337)||(13043747-13043802)
chr6 (276-326)||(2830415-2830465)
chr6 (276-326)||(6330195-6330245)
chr6 (276-326)||(8099610-8099660)
chr6 (276-326)||(8186447-8186497)
chr6 (276-326)||(8382969-8383019)
chr6 (276-326)||(9644776-9644826)
chr6 (276-326)||(9650793-9650843)
chr6 (276-326)||(11572145-11572195)
chr6 (276-326)||(13853593-13853643)
chr6 (276-326)||(26602403-26602453)
chr6 (207-311)||(14003004-14003108)
[»] chr2 (45 HSPs)
chr2 (195-312)||(23227271-23227388)
chr2 (195-312)||(41492895-41493012)
chr2 (193-326)||(44398686-44398819)
chr2 (195-326)||(3055558-3055689)
chr2 (195-326)||(37990012-37990143)
chr2 (195-326)||(41478638-41478769)
chr2 (196-326)||(13197710-13197840)
chr2 (196-326)||(15372226-15372356)
chr2 (196-326)||(15896842-15896972)
chr2 (193-326)||(44397547-44397680)
chr2 (194-326)||(13344484-13344616)
chr2 (196-326)||(12337937-12338067)
chr2 (195-328)||(6648518-6648651)
chr2 (196-328)||(16044317-16044449)
chr2 (194-326)||(38917520-38917652)
chr2 (207-266)||(13952545-13952604)
chr2 (207-266)||(14093752-14093811)
chr2 (195-326)||(37666609-37666740)
chr2 (195-320)||(9047754-9047879)
chr2 (195-320)||(16243782-16243907)
chr2 (191-292)||(13724097-13724198)
chr2 (213-306)||(14740487-14740580)
chr2 (208-327)||(12170411-12170530)
chr2 (276-330)||(12337933-12337987)
chr2 (230-316)||(20900674-20900760)
chr2 (276-326)||(41492896-41492946)
chr2 (211-264)||(3243129-3243182)
chr2 (203-240)||(23986864-23986901)
chr2 (188-321)||(30099174-30099307)
chr2 (276-328)||(15896922-15896974)
chr2 (243-326)||(4683979-4684062)
chr2 (276-327)||(15372306-15372357)
chr2 (276-326)||(3055638-3055688)
chr2 (276-326)||(6648519-6648569)
chr2 (276-326)||(9047755-9047805)
chr2 (276-326)||(13197710-13197760)
chr2 (268-326)||(13724102-13724160)
chr2 (276-326)||(37990013-37990063)
chr2 (276-326)||(38917522-38917572)
chr2 (276-326)||(41478639-41478689)
chr2 (276-326)||(44398766-44398816)
chr2 (196-229)||(12962821-12962854)
chr2 (202-255)||(20900670-20900723)
chr2 (246-327)||(31150652-31150733)
chr2 (272-312)||(30985768-30985808)
[»] chr7 (37 HSPs)
chr7 (195-311)||(28469496-28469612)
chr7 (195-326)||(38063912-38064043)
chr7 (195-326)||(1738446-1738577)
chr7 (195-326)||(7240749-7240880)
chr7 (192-326)||(9268756-9268890)
chr7 (196-326)||(22285699-22285829)
chr7 (196-326)||(36016196-36016326)
chr7 (196-326)||(46840860-46840990)
chr7 (196-329)||(31319399-31319532)
chr7 (195-326)||(7482225-7482356)
chr7 (195-326)||(36583395-36583526)
chr7 (196-326)||(23314139-23314269)
chr7 (196-320)||(94318-94442)
chr7 (194-326)||(1565727-1565859)
chr7 (202-328)||(25018370-25018496)
chr7 (192-252)||(7661150-7661210)
chr7 (195-326)||(4790248-4790379)
chr7 (195-326)||(28536750-28536881)
chr7 (196-326)||(38441460-38441590)
chr7 (189-326)||(7661069-7661206)
chr7 (196-252)||(7269479-7269535)
chr7 (196-326)||(9575409-9575539)
chr7 (276-326)||(31319399-31319449)
chr7 (269-326)||(24710742-24710799)
chr7 (276-328)||(23314137-23314189)
chr7 (276-328)||(46840940-46840992)
chr7 (206-297)||(33418405-33418496)
chr7 (276-326)||(1565729-1565779)
chr7 (276-326)||(1738447-1738497)
chr7 (276-326)||(7240829-7240879)
chr7 (276-326)||(7482305-7482355)
chr7 (276-326)||(9268836-9268886)
chr7 (276-326)||(22285779-22285829)
chr7 (193-323)||(31426784-31426914)
chr7 (188-229)||(13807354-13807395)
chr7 (205-312)||(2853680-2853787)
chr7 (211-303)||(39019843-39019934)
[»] chr4 (47 HSPs)
chr4 (192-326)||(3992976-3993110)
chr4 (195-326)||(48336263-48336394)
chr4 (196-326)||(20538686-20538816)
chr4 (193-326)||(3904680-3904813)
chr4 (196-339)||(47833598-47833741)
chr4 (196-326)||(3372121-3372251)
chr4 (195-317)||(33621805-33621927)
chr4 (196-326)||(46797725-46797855)
chr4 (193-327)||(53337369-53337503)
chr4 (196-328)||(6121893-6122025)
chr4 (196-326)||(43900549-43900679)
chr4 (194-327)||(24704369-24704502)
chr4 (211-295)||(50430433-50430517)
chr4 (195-326)||(41469765-41469896)
chr4 (195-326)||(47838616-47838747)
chr4 (195-329)||(5986873-5987007)
chr4 (196-326)||(42797732-42797862)
chr4 (196-326)||(51894582-51894712)
chr4 (222-311)||(31013036-31013125)
chr4 (197-326)||(40913190-40913319)
chr4 (194-329)||(52756672-52756807)
chr4 (211-326)||(7579310-7579425)
chr4 (194-240)||(24393906-24393952)
chr4 (228-326)||(44900080-44900178)
chr4 (195-312)||(3422075-3422191)
chr4 (276-329)||(51894579-51894632)
chr4 (208-312)||(23226015-23226119)
chr4 (207-326)||(24393831-24393950)
chr4 (196-292)||(41615676-41615772)
chr4 (195-250)||(17236864-17236919)
chr4 (195-326)||(17344213-17344344)
chr4 (276-326)||(3422140-3422190)
chr4 (276-326)||(6121893-6121943)
chr4 (276-326)||(7579390-7579440)
chr4 (276-330)||(20538682-20538736)
chr4 (212-322)||(21636139-21636249)
chr4 (276-326)||(46797805-46797855)
chr4 (276-326)||(47833691-47833741)
chr4 (245-295)||(51531502-51531552)
chr4 (276-326)||(52756755-52756805)
chr4 (276-325)||(40913190-40913239)
chr4 (196-252)||(1716301-1716357)
chr4 (270-326)||(3904683-3904739)
chr4 (270-326)||(5986950-5987006)
chr4 (270-326)||(17236862-17236918)
chr4 (226-326)||(33551201-33551301)
chr4 (243-295)||(41594685-41594737)
[»] scaffold0204 (1 HSPs)
scaffold0204 (195-326)||(23785-23916)
[»] chr8 (36 HSPs)
chr8 (195-326)||(32114474-32114605)
chr8 (196-326)||(3304278-3304408)
chr8 (193-326)||(2890159-2890292)
chr8 (196-329)||(6552652-6552785)
chr8 (194-326)||(54610-54742)
chr8 (195-326)||(7785777-7785908)
chr8 (195-326)||(8587170-8587301)
chr8 (187-326)||(32211354-32211493)
chr8 (195-328)||(39571202-39571335)
chr8 (195-326)||(7805698-7805829)
chr8 (195-326)||(12763653-12763784)
chr8 (195-326)||(43199353-43199484)
chr8 (195-326)||(44498186-44498317)
chr8 (192-326)||(25600996-25601130)
chr8 (196-326)||(31654613-31654743)
chr8 (195-325)||(30171483-30171613)
chr8 (196-326)||(33289261-33289391)
chr8 (206-327)||(12343150-12343271)
chr8 (195-326)||(7012171-7012302)
chr8 (211-326)||(15888367-15888482)
chr8 (210-290)||(12300509-12300589)
chr8 (199-274)||(4460525-4460600)
chr8 (211-326)||(13578857-13578972)
chr8 (276-328)||(31654693-31654745)
chr8 (266-321)||(28463616-28463671)
chr8 (276-326)||(54612-54662)
chr8 (276-326)||(2890162-2890212)
chr8 (276-326)||(6552735-6552785)
chr8 (276-326)||(7785778-7785828)
chr8 (276-326)||(15888352-15888402)
chr8 (276-326)||(33289261-33289311)
chr8 (276-326)||(39571203-39571253)
chr8 (210-323)||(17006914-17007027)
chr8 (210-323)||(17570220-17570333)
chr8 (195-274)||(27422242-27422321)
chr8 (194-258)||(33057662-33057726)
[»] chr5 (26 HSPs)
chr5 (195-329)||(9395347-9395481)
chr5 (195-326)||(13103024-13103155)
chr5 (195-326)||(36563537-36563668)
chr5 (195-326)||(41989406-41989537)
chr5 (196-326)||(37148955-37149085)
chr5 (194-327)||(11795167-11795300)
chr5 (195-326)||(13033051-13033182)
chr5 (196-326)||(23359942-23360072)
chr5 (194-326)||(17025624-17025756)
chr5 (196-331)||(20848069-20848203)
chr5 (196-274)||(6126876-6126954)
chr5 (226-326)||(582989-583089)
chr5 (193-297)||(21575975-21576079)
chr5 (195-326)||(26350349-26350480)
chr5 (276-330)||(37148951-37149005)
chr5 (194-326)||(37641953-37642086)
chr5 (230-326)||(11574114-11574210)
chr5 (199-326)||(4443960-4444087)
chr5 (276-326)||(6126904-6126954)
chr5 (276-326)||(9395430-9395480)
chr5 (276-326)||(13103104-13103154)
chr5 (276-326)||(17025704-17025754)
chr5 (276-326)||(36563538-36563588)
chr5 (276-326)||(41989407-41989457)
chr5 (276-329)||(583069-583121)
chr5 (213-297)||(2629561-2629645)
[»] chr3 (45 HSPs)
chr3 (196-326)||(34080030-34080160)
chr3 (196-326)||(34988075-34988205)
chr3 (194-326)||(37508921-37509053)
chr3 (194-326)||(49823379-49823511)
chr3 (195-326)||(10297979-10298110)
chr3 (195-326)||(17653712-17653843)
chr3 (196-326)||(19557052-19557182)
chr3 (192-326)||(51406673-51406807)
chr3 (193-326)||(22721931-22722064)
chr3 (194-326)||(46208030-46208162)
chr3 (211-311)||(53275310-53275410)
chr3 (196-326)||(9213516-9213646)
chr3 (196-326)||(48340397-48340527)
chr3 (195-320)||(40690995-40691120)
chr3 (196-320)||(2787832-2787956)
chr3 (194-326)||(8437425-8437557)
chr3 (195-326)||(4238594-4238725)
chr3 (195-326)||(8817385-8817516)
chr3 (211-326)||(33942947-33943062)
chr3 (195-326)||(36095679-36095810)
chr3 (199-326)||(42507358-42507485)
chr3 (211-326)||(44785411-44785526)
chr3 (196-326)||(21295326-21295456)
chr3 (196-326)||(38964392-38964522)
chr3 (196-326)||(42170346-42170476)
chr3 (193-326)||(9111491-9111624)
chr3 (188-250)||(53275287-53275349)
chr3 (223-328)||(2131699-2131804)
chr3 (243-328)||(35513471-35513556)
chr3 (276-328)||(48340477-48340529)
chr3 (196-323)||(6013336-6013463)
chr3 (276-326)||(10298059-10298109)
chr3 (276-326)||(19557052-19557102)
chr3 (276-326)||(34080030-34080080)
chr3 (276-326)||(40690996-40691046)
chr3 (276-330)||(42507351-42507405)
chr3 (276-326)||(44785396-44785446)
chr3 (276-326)||(49823381-49823431)
chr3 (196-301)||(2131697-2131802)
chr3 (192-297)||(5237536-5237640)
chr3 (268-329)||(5323279-5323340)
chr3 (280-329)||(6013333-6013382)
chr3 (195-264)||(9027141-9027210)
chr3 (196-228)||(21663003-21663035)
chr3 (243-295)||(43323091-43323143)
[»] scaffold0464 (1 HSPs)
scaffold0464 (195-326)||(6130-6261)
[»] chr1 (43 HSPs)
chr1 (195-326)||(11897054-11897185)
chr1 (194-329)||(47216697-47216832)
chr1 (196-326)||(27159358-27159488)
chr1 (196-326)||(31842795-31842925)
chr1 (196-326)||(39401966-39402096)
chr1 (196-326)||(44668093-44668223)
chr1 (195-320)||(14984843-14984968)
chr1 (199-326)||(9981647-9981774)
chr1 (196-326)||(11795933-11796063)
chr1 (196-326)||(26471065-26471195)
chr1 (195-328)||(1050886-1051019)
chr1 (195-326)||(17556752-17556884)
chr1 (195-334)||(12483627-12483766)
chr1 (195-326)||(34042696-34042827)
chr1 (196-318)||(47777481-47777603)
chr1 (227-326)||(16448139-16448238)
chr1 (206-328)||(44955216-44955338)
chr1 (193-326)||(25694319-25694452)
chr1 (194-326)||(37552141-37552273)
chr1 (226-326)||(23278031-23278131)
chr1 (195-311)||(47588336-47588452)
chr1 (195-326)||(47969694-47969826)
chr1 (276-326)||(11897134-11897184)
chr1 (268-330)||(11989853-11989915)
chr1 (276-326)||(34042776-34042826)
chr1 (276-329)||(39401963-39402016)
chr1 (270-326)||(12483628-12483684)
chr1 (276-328)||(31842793-31842845)
chr1 (276-328)||(47777479-47777531)
chr1 (276-327)||(11796013-11796064)
chr1 (206-312)||(12043618-12043723)
chr1 (276-326)||(14984917-14984967)
chr1 (194-252)||(16448182-16448240)
chr1 (276-326)||(17556833-17556883)
chr1 (276-326)||(25694399-25694449)
chr1 (276-326)||(27159358-27159408)
chr1 (206-240)||(40676799-40676833)
chr1 (276-326)||(44668093-44668143)
chr1 (276-326)||(47216699-47216749)
chr1 (188-229)||(38040267-38040308)
chr1 (195-240)||(47588423-47588468)
chr1 (195-283)||(19610779-19610867)
chr1 (276-328)||(26471063-26471115)
[»] scaffold0009 (2 HSPs)
scaffold0009 (190-326)||(49505-49641)
scaffold0009 (270-327)||(49579-49636)
[»] scaffold0482 (1 HSPs)
scaffold0482 (195-326)||(12860-12991)
[»] scaffold0171 (1 HSPs)
scaffold0171 (213-323)||(12370-12480)
[»] scaffold1707 (1 HSPs)
scaffold1707 (211-319)||(1342-1450)
[»] scaffold0650 (1 HSPs)
scaffold0650 (231-326)||(20-114)
[»] scaffold0017 (1 HSPs)
scaffold0017 (196-288)||(30008-30099)


Alignment Details
Target: chr6 (Bit Score: 405; Significance: 0; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 17 - 515
Target Start/End: Complemental strand, 5685644 - 5685150
Alignment:
Q  17 agaactatactatatatcataatcatagtttcaaattgcactcgcagttacattgtaaacctttatattgcagccttgcaggaaaatgtagctgcaattg 116  Q
    |||||||||||||||  |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||  |||||| |||||||    
T  5685644 agaactatactatat--cataatcatagtttcaaattgcactcacagttatactgtaaacctttatattgcagccttgcaggaa--tgtagccgcaattg 5685549  T
Q  117 tcattccaatgctgttgtggagacctctaaaactgttaagttgcagctgcagatcgcaatttacaactataatattatatactccctctggtcttattta 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5685548 tcattccaatgccgttgtggagacctctaaaactgttaagttgcagctgcagattgcaatttacaactataatattatatactccatctggtcttattta 5685449  T
Q  217 taagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaacc 316  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5685448 taagaaacatttgggtcagcaaaatatgatgtaacttgttaataatttggtccaaatacatcaacttttgttgacccaaatgttttttattaatagaacc 5685349  T
Q  317 ggagggagtaataagttaataatcaaggagagaaattacttgaagaagtagggggtgagccagggctaagaggtggtgggaatagtggaggaaaaggaag 416  Q
     || ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5685348 agaaggaataatatgttaataatcaaggagagaaattacttgaagaagtagggggtgagccagggctaagaggtggtgggaacagtggaggaaaaggaag 5685249  T
Q  417 taagggagcaggaaaaattgattttggtggtggcggcggcggcggtgatggagttaaacttggtattactattggtggaaaaggaaatgatggtggtgg 515  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5685248 taagggagcaggaaaaattgattttggtggtggcggcggcggtggtgatggagttaaacctggtattactattggtggaaaaggaaatgatggtggtgg 5685150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 191 - 323
Target Start/End: Original strand, 14936452 - 14936584
Alignment:
Q  191 ttatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttga 290  Q
    ||||||||||||||||||| ||| || ||||||||||| |||||||||||  |||||||||| ||||| |||||| |||||||| ||||||| |||||||    
T  14936452 ttatatactccctctggtcctatatagaagaaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttga 14936551  T
Q  291 cccaaatgtcttttattaatagaaccggaggga 323  Q
    ||||||| ||| |||| ||||| ||| ||||||    
T  14936552 cccaaatatctcttataaataggaccagaggga 14936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 330
Target Start/End: Complemental strand, 26602454 - 26602319
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  26602454 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26602355  T
Q  295 aatgtcttttattaatagaaccggagggagtaataa 330  Q
    ||| ||| |||| ||||| |||||||| ||||||||    
T  26602354 aatttctcttataaataggaccggaggtagtaataa 26602319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 326
Target Start/End: Original strand, 11572141 - 11572275
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgac 291  Q
    ||||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||    
T  11572141 tatatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 11572240  T
Q  292 ccaaatgtcttttattaatagaaccggagggagta 326  Q
    | |||| ||| |||| ||||| |||||||| ||||    
T  11572241 ctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 6330248 - 6330115
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||    
T  6330248 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 6330149  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||||||| ||||    
T  6330148 taaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 2830465 - 2830335
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  2830365 atttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 8382969 - 8383099
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 8383068  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  8383069 atttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 13853591 - 13853723
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  13853591 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 13853690  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||| ||| ||||    
T  13853691 aaatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 8099661 - 8099530
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |    
T  8099661 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 8099562  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  8099561 aatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 9644827 - 9644693
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | || |||||||| |    
T  9644827 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9644728  T
Q  295 aatgtcttttattaatagaaccggagggagtaata 329  Q
    ||| ||| |||| ||||| |||||||| |||||||    
T  9644727 aatttctcttataaataggaccggaggtagtaata 9644693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 9650844 - 9650710
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | || |||||||| |    
T  9650844 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9650745  T
Q  295 aatgtcttttattaatagaaccggagggagtaata 329  Q
    ||| ||| |||| ||||| |||||||| |||||||    
T  9650744 aatttctcttataaataggaccggaggtagtaata 9650710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 6068931 - 6069062
Alignment:
Q  189 tattatatactccctctggtcttatttata--agaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttg 286  Q
    ||||| ||||||| |||| || ||||||||  ||||| |||| ||||||||||| |||| |||||  ||||| ||||| | ||||||| || ||||||||    
T  6068931 tattaaatactccatctgatcctatttatataagaaatatttaggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttg 6069030  T
Q  287 ttgacccaaatgtcttttattaatagaaccgg 318  Q
    |||||| |||| |||||||| ||||| |||||    
T  6069031 ttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 35030999 - 35031131
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    |||||| |||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  35030999 tatacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 35031098  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| | | |||| ||||| |||||||| ||||    
T  35031099 aaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 33052793 - 33052924
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||| || |||| ||||||||||| |  |||||||||| ||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  33052793 atactccatccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33052892  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  33052893 aatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 8417793 - 8417923
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||  |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| ||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8417892  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||  ||| |||||||||    
T  8417893 atttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 297
Target Start/End: Complemental strand, 4251423 - 4251338
Alignment:
Q  212 atttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaat 297  Q
    ||||||||||||||||| |||||| ||||| |||||||||| ||||| |||||||  ||| ||  | ||||||||||||| |||||    
T  4251423 atttataagaaacatttaggtcaataaaatgtgatgtatctagttaagaatttggatcaagtacgttaacttttgttgactcaaat 4251338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 6068699 - 6068566
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||| ||||||||||  |||||||||| ||||| ||||   |||||||| ||  |||||| ||||||    
T  6068699 atatactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacc 6068600  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| | | |||| ||||| |||||||| ||||    
T  6068599 taaatttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 3788170 - 3788100
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatt 263  Q
    |||||||||||| |||||||||||||||| | |||| |||||||||||  |||||||| | ||||| ||||    
T  3788170 atatactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaatt 3788100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 28747126 - 28747228
Alignment:
Q  188 atattatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgt 287  Q
    ||||||||||||||||   ||| ||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||    
T  28747126 atattatatactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgt 28747225  T
Q  288 tga 290  Q
    |||    
T  28747226 tga 28747228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 8417924 - 8417879
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaa 240  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||    
T  8417924 atactccctctggtcttatttataagagaaatttaggtcaacaaaa 8417879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 6143669 - 6143554
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| |  |||||| ||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| |||    
T  6143669 tatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaat 6143570  T
Q  311 agaaccggagggagta 326  Q
    || | |||||| ||||    
T  6143569 aggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 13043802 - 13043747
Alignment:
Q  282 ttttgttgacccaaatgtcttttattaatagaaccggagggagtaataagttaata 337  Q
    ||||||||||| |||| ||| |||| |||||||||||||| |||||||| ||||||    
T  13043802 ttttgttgacctaaatttctcttataaatagaaccggaggtagtaataaattaata 13043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 2830415 - 2830465
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  2830415 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 6330195 - 6330245
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6330195 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 8099610 - 8099660
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  8099610 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 8186447 - 8186497
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||||||||||||| |||||| |||||||| ||||| ||||| |||||||    
T  8186447 atcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 8383019 - 8382969
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  8383019 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 9644776 - 9644826
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9644776 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 9650793 - 9650843
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9650793 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 11572195 - 11572145
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  11572195 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 13853643 - 13853593
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  13853643 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 26602403 - 26602453
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  26602403 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 14003004 - 14003108
Alignment:
Q  207 gtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttat 306  Q
    |||||||||||| |||||||||  || ||| | | ||||| ||||| ||||| ||| |||  || ||| || ||||||||||||| ||||||||| ||||    
T  14003004 gtcttatttatacgaaacatttaagttaaccatagatgatatatctggttaagaatgtggatcatatagattaacttttgttgactcaaatgtctcttat 14003103  T
Q  307 taata 311  Q
     ||||    
T  14003104 aaata 14003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 6e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 23227271 - 23227388
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||   ||| ||||||| ||||||| ||||||||||||||||| |    
T  23227271 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaa 23227370  T
Q  295 aatgtcttttattaatag 312  Q
    ||||||| |||| |||||    
T  23227371 aatgtctcttataaatag 23227388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 41492895 - 41493012
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgaccta 41492994  T
Q  295 aatgtcttttattaatag 312  Q
    ||| |||||||| |||||    
T  41492995 aatttcttttataaatag 41493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 44398819 - 44398686
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||    
T  44398819 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 44398720  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||||||| ||||    
T  44398719 taaatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 3055689 - 3055558
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  3055689 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 3055590  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  3055589 aatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 37990012 - 37990143
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  37990012 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37990111  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  37990112 aatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 41478638 - 41478769
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  41478638 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41478737  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  41478738 aatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 13197710 - 13197840
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 13197809  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  13197810 atttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 15372356 - 15372226
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| || ||||||||||    
T  15372256 atttctcttataaataggactggagggagta 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 15896972 - 15896842
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  15896872 atttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 44397680 - 44397547
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||| | |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||    
T  44397680 atatactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 44397581  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||||||| ||||    
T  44397580 taaatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 13344616 - 13344484
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  | |||||||||||     
T  13344616 tatactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 13344517  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| |||||||||||||| ||||    
T  13344516 aaatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 12337937 - 12338067
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| ||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || | | |||| |||||||||||||| ||||    
T  12338037 atttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 6648518 - 6648651
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | || |||||||| |    
T  6648518 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 6648617  T
Q  295 aatgtcttttattaatagaaccggagggagtaat 328  Q
    ||| ||| |||| ||||| |||||||| ||||||    
T  6648618 aatttctcttataaataggaccggaggtagtaat 6648651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 16044317 - 16044449
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  ||||||||||| |||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| ||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaa 16044416  T
Q  296 atgtcttttattaatagaaccggagggagtaat 328  Q
    || ||| |||| ||||| |||||||| ||||||    
T  16044417 atttctcttataaataggaccggaggtagtaat 16044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 38917520 - 38917652
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||| ||||||     
T  38917520 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 38917619  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| | | |||| ||||| |||||||| ||||    
T  38917620 aaatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 13952545 - 13952604
Alignment:
Q  207 gtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttgg 266  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  13952545 gtcttatttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatttgg 13952604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 14093752 - 14093811
Alignment:
Q  207 gtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttgg 266  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14093752 gtcttatttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatttgg 14093811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 37666609 - 37666740
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||||||||||| |||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| |    
T  37666609 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 37666708  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  37666709 aatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 9047754 - 9047879
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||| |||||| |    
T  9047754 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgaccta 9047853  T
Q  295 aatgtcttttattaatagaaccggag 320  Q
    ||| ||| |||| ||||  |||||||    
T  9047854 aatttctcttataaatatgaccggag 9047879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 16243782 - 16243907
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||| || |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  16243782 atactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 16243881  T
Q  295 aatgtcttttattaatagaaccggag 320  Q
    ||| | | |||| ||||| |||||||    
T  16243882 aatttttcttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 13724097 - 13724198
Alignment:
Q  191 ttatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttga 290  Q
    |||| ||||||||| |||| |||||| |||| |||| | |||||||||||  |||||||| | ||||| || |||| ||| ||| |||||||||||||||    
T  13724097 ttatgtactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttga 13724196  T
Q  291 cc 292  Q
    ||    
T  13724197 cc 13724198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 14740580 - 14740487
Alignment:
Q  213 tttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttat 306  Q
    ||||||||||||||||  |||||| |||| |||||||||| ||||| ||||||| | ||||| || | ||||||||||| ||||| ||| ||||    
T  14740580 tttataagaaacatttaagtcaactaaatgtgatgtatctggttaaaaatttggacgaaatacattaccttttgttgacacaaatatctcttat 14740487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 12170411 - 12170530
Alignment:
Q  208 tcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttatt 307  Q
    |||||||||||||| | | ||||||||||||||  |||||||| | ||||| ||||  ||||||||| || ||||||| |||||| || | ||| || |     
T  12170411 tcttatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgta 12170510  T
Q  308 aatagaaccggagggagtaa 327  Q
    ||||| | ||||||||||||    
T  12170511 aataggatcggagggagtaa 12170530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 12337987 - 12337933
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 330  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  12337987 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaataa 12337933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 316
Target Start/End: Complemental strand, 20900760 - 20900674
Alignment:
Q  230 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaacc 316  Q
    |||||||||||  ||| |||||| ||| | ||||||| | | ||| ||||||||||| |||||||||||||| |||| |||||||||    
T  20900760 ggtcaacaaaaattgacgtatctggttcaaaatttggacaagatacatcaacttttgctgacccaaatgtctcttataaatagaacc 20900674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 41492946 - 41492896
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  41492946 atcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 3243129 - 3243182
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataattt 264  Q
    |||||||||||||||||| ||||||| |||| |||||||||| ||||| |||||    
T  3243129 tatttataagaaacatttaggtcaactaaatgtgatgtatctcgttaagaattt 3243182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 23986901 - 23986864
Alignment:
Q  203 tctggtcttatttataagaaacatttgggtcaacaaaa 240  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23986901 tctggtcttatttataagaaacatttgagtcaacaaaa 23986864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 30099174 - 30099307
Alignment:
Q  188 atattatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgt 287  Q
    ||||| ||||||||||| |||| ||||||| ||| |  |||||||||||||||  ||||||||||  |||| ||||   |||||||| ||  | ||||||    
T  30099174 atattttatactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgt 30099273  T
Q  288 tgacccaaatgtcttttattaatagaaccggagg 321  Q
    ||||| |||| ||| |||| ||||| | ||||||    
T  30099274 tgacctaaatttctcttataaataggatcggagg 30099307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 15896922 - 15896974
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  15896922 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 15896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 4683979 - 4684062
Alignment:
Q  243 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| ||||    
T  4683979 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 15372306 - 15372357
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 327  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||    
T  15372306 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 15372357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 3055638 - 3055688
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  3055638 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 6648569 - 6648519
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6648569 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 9047805 - 9047755
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9047805 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 13197760 - 13197710
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  13197760 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 326
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  268 ccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||||| ||||||||||||||||| | |||||| || | ||||| |||||||||||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 37990063 - 37990013
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  37990063 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 38917572 - 38917522
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  38917572 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 41478689 - 41478639
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  41478689 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 44398766 - 44398816
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  44398766 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 12962854 - 12962821
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttg 229  Q
    |||||||||||||| |||||||||||||||||||    
T  12962854 tactccctctggtcctatttataagaaacatttg 12962821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 20900670 - 20900723
Alignment:
Q  202 ctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgt 255  Q
    |||||||  ||||||||||| |||||||||||| |||||  |||||||||||||    
T  20900670 ctctggttctatttataagagacatttgggtcagcaaaagttgatgtatcttgt 20900723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 31150733 - 31150652
Alignment:
Q  246 tgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 327  Q
    ||||||| ||||| ||||| ||||||||| || ||||||||||||| ||| | ||| |||| ||||| | ||||| ||||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagtaa 31150652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 30985768 - 30985808
Alignment:
Q  272 ataaatcaacttttgttgacccaaatgtcttttattaatag 312  Q
    ||||||||||||||||||||| |||||||| |||| |||||    
T  30985768 ataaatcaacttttgttgaccaaaatgtctgttataaatag 30985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 6e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 28469612 - 28469496
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||||||  |||||||||||| ||  ||| || |||||||||||||| |    
T  28469612 atactccctctggtcatatttataagaatcatttaggtcaataaaatgtgatgtatctgattaataatttggacctgatacattaacttttgttgaccta 28469513  T
Q  295 aatgtcttttattaata 311  Q
    |||||||||||| ||||    
T  28469512 aatgtcttttataaata 28469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 38063912 - 38064043
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||||||||||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  38063912 atactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 38064011  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  38064012 aatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 1738446 - 1738577
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  1738446 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1738545  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  1738546 aatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 7240880 - 7240749
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  7240880 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7240781  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  7240780 aatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 192 - 326
Target Start/End: Complemental strand, 9268890 - 9268756
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgac 291  Q
    ||||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||    
T  9268890 tatatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 9268791  T
Q  292 ccaaatgtcttttattaatagaaccggagggagta 326  Q
    | |||| ||| |||| ||||| ||| |||| ||||    
T  9268790 ctaaatttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 22285829 - 22285699
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| ||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 22285730  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||||||||    
T  22285729 atttctcttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 36016196 - 36016326
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||||| ||||||| ||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| ||    
T  36016196 tactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 36016295  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||||||||    
T  36016296 atttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 46840990 - 46840860
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  46840890 atttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 329
Target Start/End: Original strand, 31319399 - 31319532
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||  ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31319498  T
Q  296 atgtcttttattaatagaaccggagggagtaata 329  Q
    || ||| |||| ||||| |||||||| |||||||    
T  31319499 atttctcttataaataggaccggaggtagtaata 31319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 7482356 - 7482225
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| |    
T  7482356 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 7482257  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  7482256 aatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 36583526 - 36583395
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| | || ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  36583526 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgaccta 36583427  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  36583426 aatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 23314139 - 23314269
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||| ||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23314238  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  23314239 atttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 94318 - 94442
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| | || ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  94318 tactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaa 94417  T
Q  296 atgtcttttattaatagaaccggag 320  Q
    || ||| |||| ||||| |||||||    
T  94418 atttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 1565727 - 1565859
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||  |||  ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  1565727 tatactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 1565826  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||| ||||    
T  1565827 aaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 25018370 - 25018496
Alignment:
Q  202 ctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtct 301  Q
    |||||||| ||||| ||||||||||||  ||||| ||||| | |||||||| ||||| ||| | | ||||||| ||||||||||||||  | |||| | |    
T  25018370 ctctggtcctatttgtaagaaacatttatgtcaataaaatgttatgtatctggttaagaatgttgaccaaatacatcaacttttgttggtctaaatattt 25018469  T
Q  302 tttattaatagaaccggagggagtaat 328  Q
     |||||||||||||  |||||||||||    
T  25018470 cttattaatagaacatgagggagtaat 25018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 7661210 - 7661150
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatct 252  Q
    |||||||||||||||||| |||||||| || ||||||||||||||||||  ||||||||||    
T  7661210 tatatactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatct 7661150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 4790379 - 4790248
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||| |||| |||| ||||||||||| |  |||||||||| ||||  |||||||||| ||||| ||||| ||||||||| ||  | ||||||||||| |    
T  4790379 atacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgaccta 4790280  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| | | |||| ||||| |||||||| ||||    
T  4790279 aatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 28536750 - 28536881
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||||| |||| ||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |    
T  28536750 atactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgaccta 28536849  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  28536850 aatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 38441590 - 38441460
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||| |||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||  ||    
T  38441590 tacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataa 38441491  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  38441490 atttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 7661069 - 7661206
Alignment:
Q  189 tattatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgtt 288  Q
    |||||||||||||||  | || ||||||||||| | ||||  ||||| ||||  ||||||| || || || || |||| | | ||| |||||||||||||    
T  7661069 tattatatactcccttcgatcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgtt 7661168  T
Q  289 gacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||  ||| ||||| ||| |||||||||    
T  7661169 gacccaaatgtctcatataaataggaccagagggagta 7661206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 7269535 - 7269479
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatct 252  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||  ||||||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatct 7269479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 9575539 - 9575409
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||  |||| ||||||||||| | | || |||||||||||  |||||||||| ||||| ||||  ||| |||||  | |||||||||||||||||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaa 9575440  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
     | ||| |||  ||||| ||| |||||||||    
T  9575439 ctttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 31319449 - 31319399
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||||||||    
T  31319449 atcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 24710742 - 24710799
Alignment:
Q  269 caaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||| |||||||||||||||||||  |||||||||| || || |||||||||||||    
T  24710742 caaatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagta 24710799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 23314189 - 23314137
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  23314189 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 23314137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 46840940 - 46840992
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  46840940 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 46840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 33418496 - 33418405
Alignment:
Q  206 ggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaat 297  Q
    |||| ||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| ||||    
T  33418496 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaat 33418405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 1565779 - 1565729
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| |||||||||| ||||||||    
T  1565779 atcaacttttgttgacccaaaattctcttataaatagaaccgaagggagta 1565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 1738497 - 1738447
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  1738497 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 7240829 - 7240879
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  7240829 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 7482305 - 7482355
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  7482305 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 9268836 - 9268886
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9268836 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 22285779 - 22285829
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  22285779 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 323
Target Start/End: Complemental strand, 31426914 - 31426784
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||||  |||||||||||||| | |||||| |||| ||||  ||||  |||||||| | ||| |||  || ||| | ||| |||| |||||     
T  31426914 atatactccctctattcttatttataagagatatttggatcaataaaagttgattaatcttgttcaaaatgtggatcagatacaacaatttttattgacg 31426815  T
Q  293 caaatgtcttttattaatagaaccggaggga 323  Q
    ||||| | |||||| |||||||||| |||||    
T  31426814 caaatattttttataaatagaaccgtaggga 31426784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 13807395 - 13807354
Alignment:
Q  188 atattatatactccctctggtcttatttataagaaacatttg 229  Q
    ||||||||||||||||| |||  |||||||||||||||||||    
T  13807395 atattatatactccctccggttctatttataagaaacatttg 13807354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 2853680 - 2853787
Alignment:
Q  205 tggtcttatttataagaaacatttgggtcaacaaaa-tatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttt 303  Q
    ||||||||||| ||||| | |||||| ||||||||| ||| |||||||| ||||| || |||  ||| ||| ||||| ||||||||||| || | |||||    
T  2853680 tggtcttatttgtaagagaaatttggatcaacaaaagtat-atgtatctagttaaaaaattgaaccatatacatcaatttttgttgaccaaactatcttt 2853778  T
Q  304 tattaatag 312  Q
    ||| |||||    
T  2853779 tataaatag 2853787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 39019843 - 39019934
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttt 303  Q
    |||||||||||  ||||||| |||||||||  |||||||||| ||| | || ||||  |||| | ||||||||||||||||| | ||||||||    
T  39019843 tatttataagaggcatttggatcaacaaaaattgatgtatctagttcaaaacttggatcaaa-atatcaacttttgttgacctatatgtcttt 39019934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 192 - 326
Target Start/End: Complemental strand, 3993110 - 3992976
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgac 291  Q
    ||||||||||||| |||||||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||    
T  3993110 tatatactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 3993011  T
Q  292 ccaaatgtcttttattaatagaaccggagggagta 326  Q
    | |||| ||| |||| ||||| |||||||| ||||    
T  3993010 cgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 48336394 - 48336263
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  48336394 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 48336295  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  48336294 aatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 20538686 - 20538816
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||| |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 20538785  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  20538786 atttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 326
Target Start/End: Original strand, 3904680 - 3904813
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||| | ||||| ||||  ||||||||| ||  |||||||||||||    
T  3904680 atatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 3904779  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| |||||||| ||||| |||||||| ||||    
T  3904780 taaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 47833741 - 47833598
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47833642  T
Q  296 atgtcttttattaatagaaccggagggagtaataagttaataat 339  Q
    || ||| |||| ||||| |||||||| |||| ||  ||||||||    
T  47833641 atttctcttataaataggaccggaggtagtattattttaataat 47833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 3372251 - 3372121
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3372152  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  3372151 atttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 33621927 - 33621805
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  33621927 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33621828  T
Q  295 aatgtcttttattaatagaaccg 317  Q
    ||| ||| |||| ||||||||||    
T  33621827 aatttctcttataaatagaaccg 33621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 46797855 - 46797725
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||| ||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46797756  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| |||||||||||||| ||||    
T  46797755 atttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 193 - 327
Target Start/End: Complemental strand, 53337503 - 53337369
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||||||||| ||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||    
T  53337503 atatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 53337404  T
Q  293 caaatgtcttttattaatagaaccggagggagtaa 327  Q
     |||| ||| |||| ||||| |||||||| |||||    
T  53337403 taaatttctcttataaataggaccggaggtagtaa 53337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 6121893 - 6122025
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | ||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 6121992  T
Q  296 atgtcttttattaatagaaccggagggagtaat 328  Q
    || ||| |||| ||||| |||||||| ||||||    
T  6121993 atttctcttataaataggaccggaggtagtaat 6122025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 43900679 - 43900549
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||| |||| |||| ||||||||||| |  ||||||| |||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||||||||    
T  43900579 atttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 327
Target Start/End: Complemental strand, 24704502 - 24704369
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| | || ||||||||||| |  |||||||||||||||  | |||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  24704502 tatactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 24704403  T
Q  294 aaatgtcttttattaatagaaccggagggagtaa 327  Q
    |||| ||| |||| ||||| |||||||| |||||    
T  24704402 aaatttctcttataaataggaccggaggtagtaa 24704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 50430433 - 50430517
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||||| | ||||||||||||||||  |||||||||| ||||| ||||   |||||||| ||||||||||||||||||||    
T  50430433 tatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaa 50430517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 41469765 - 41469896
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |    
T  41469765 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 41469864  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| |||||||| ||||| |||| ||| ||||    
T  41469865 aatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 47838616 - 47838747
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  47838616 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 47838715  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| | |||||| ||||    
T  47838716 aatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 5987007 - 5986873
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||| ||| |||| ||||||||||| |  |||||||||||||||  |||||||| | ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  5987007 atactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgaccta 5986908  T
Q  295 aatgtcttttattaatagaaccggagggagtaata 329  Q
     || ||| |||| ||||||| |||||| |||||||    
T  5986907 tatttctcttataaatagaatcggaggtagtaata 5986873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 42797862 - 42797732
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 42797763  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| ||||  |||| |||||||| ||||    
T  42797762 atttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 51894582 - 51894712
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||| | ||  ||||||||||||| ||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaa 51894681  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || | | |||| ||||| |||||||| ||||    
T  51894682 atttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 31013125 - 31013036
Alignment:
Q  222 aacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaata 311  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||   ||||||| ||| ||||||||||| | ||||||||||||| ||||    
T  31013125 aacatttaggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 40913190 - 40913319
Alignment:
Q  197 actccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaa 296  Q
    |||||||| |||| ||||||||||| | |||||| |||||||||  |||| ||||  ||||| ||||  ||||||||| ||  ||||||||||| | |||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaa 40913289  T
Q  297 tgtcttttattaatagaaccggagggagta 326  Q
    | ||| |||| ||||| |||||||||||||    
T  40913290 tttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 329
Target Start/End: Complemental strand, 52756807 - 52756672
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||  |||| ||||||||| | |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||| ||||||||     
T  52756807 tatactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacct 52756708  T
Q  294 aaatgtcttttattaatagaaccggagggagtaata 329  Q
    |||| ||| |||| ||||| |||||||  |||||||    
T  52756707 aaatttctcttataaataggaccggagatagtaata 52756672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 7579425 - 7579310
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||| ||| |||| ||| |||| |||    
T  7579425 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaat 7579326  T
Q  311 agaaccggagggagta 326  Q
    || |||||||| ||||    
T  7579325 aggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 24393952 - 24393906
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaa 240  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||    
T  24393952 tatactccctccggtcatattcataagaaacatttgggtcaacaaaa 24393906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 44900178 - 44900080
Alignment:
Q  228 tgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||  ||| |||||| |||||  | |||| ||| ||| |||||||||||||||||  ||| ||| |||| ||||| |||||||||||||    
T  44900178 tgggtcaacaaaagttgacgtatctggttaaacaattggaccagatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 3422191 - 3422075
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  | ||||||||||| |    
T  3422191 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgaccta 3422093  T
Q  295 aatgtcttttattaatag 312  Q
    ||| ||| |||| |||||    
T  3422092 aatttctcttataaatag 3422075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 51894632 - 51894579
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 329  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||    
T  51894632 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 51894579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 23226015 - 23226119
Alignment:
Q  208 tcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttatt 307  Q
    |||||||||||||| | |||| | |||||||||  |||||||||  ||| | |||||||  || ||| || ||||||||||||||||||| |||| |||     
T  23226015 tcttatttataagagatatttagatcaacaaaaattgatgtatccagttcaaaatttggatcagatacataaacttttgttgacccaaatatcttctata 23226114  T
Q  308 aatag 312  Q
    |||||    
T  23226115 aatag 23226119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 24393831 - 24393950
Alignment:
Q  207 gtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaactttt-gttgacccaaatgtctttta 305  Q
    ||||| ||||||||||| |||| ||| |||||||  ||| |||||| ||||| | ||||  ||||||| ||||| |||| |||||||||||||| | |||    
T  24393831 gtcttgtttataagaaatatttaggtaaacaaaaagtgacgtatctcgttaaga-tttgaaccaaatacatcaattttttgttgacccaaatgtttctta 24393929  T
Q  306 ttaatagaaccggagggagta 326  Q
    | ||||  |||||||||||||    
T  24393930 tgaatatgaccggagggagta 24393950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 41615676 - 41615772
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||| || |||| ||||||||||| | | |||| |||||||||  |||||||| | ||||| ||||  ||||||||| || ||||||||||||||    
T  41615676 tactccatccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacc 41615772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 17236919 - 17236864
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtat 250  Q
    |||||| ||| |||| ||||||||||||| ||||||||||||||||  ||||||||    
T  17236919 atactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 17344344 - 17344213
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||||||   |||||||||||||| | |||||| |||||||||  |||||||||   |||| ||||  || || ||| |||||||||||||||   |    
T  17344344 atactccctccaatcttatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgattta 17344245  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    | | ||| |||| ||||||||||||| |||||    
T  17344244 actttctcttataaatagaaccggagcgagta 17344213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 3422140 - 3422190
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  3422140 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 6121943 - 6121893
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6121943 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 7579390 - 7579440
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||| ||||    
T  7579390 atcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 20538736 - 20538682
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 330  Q
    ||||| |||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  20538736 atcaaattttgttgacccaaaattctcttataaataggaccggagggagtaataa 20538682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 21636139 - 21636249
Alignment:
Q  212 atttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaata 311  Q
    |||||||||||| ||||| ||| | ||||  |||||||||  ||||| || |||   |||||| || || |||||||||  ||||||||| |||| ||||    
T  21636139 atttataagaaaaatttgagtcgataaaagttgatgtatcaggttaaaaaattgaagcaaatacattaatttttgttgattcaaatgtctcttataaata 21636238  T
Q  312 gaaccggaggg 322  Q
    |||||||||||    
T  21636239 gaaccggaggg 21636249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 46797805 - 46797855
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  46797805 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 47833691 - 47833741
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  47833691 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 51531552 - 51531502
Alignment:
Q  245 atgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  51531552 atgtatcttgttcaaaatttggaccaaatacatcaatttttgttgacccaa 51531502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 52756755 - 52756805
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  |||||||| ||||| |||| ||||||||    
T  52756755 atcaacttttgttgacccaaaattcttttataaataggaccgaagggagta 52756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 40913239 - 40913190
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 325  Q
    ||||||||||||||| |||||| ||| |||| ||||| ||||||||||||    
T  40913239 atcaacttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 1716301 - 1716357
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatct 252  Q
    ||||||||| |||||||||||||||| | | || |||||||||||  ||||||||||    
T  1716301 tactccctccggtcttatttataagagataatttggtcaacaaaagttgatgtatct 1716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 3904739 - 3904683
Alignment:
Q  270 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||| ||||| |||||||||||||||  ||| |||| ||||| |||||||||||||    
T  3904739 aaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 5986950 - 5987006
Alignment:
Q  270 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||| |||||||||||||||||||||  ||| |||| ||||| ||||||| |||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 17236862 - 17236918
Alignment:
Q  270 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||| |||||||||||||||||||||| | | |||| ||||| ||||||| |||||    
T  17236862 aaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 33551301 - 33551201
Alignment:
Q  226 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 325  Q
    |||||||  ||||||  |||||||||| ||||| ||||  ||| ||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  33551301 tttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 33551202  T
Q  326 a 326  Q
    |    
T  33551201 a 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 41594737 - 41594685
Alignment:
Q  243 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||||||||| ||| | ||||||| ||| ||| ||||||||||||||||||||    
T  41594737 tgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaa 41594685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 23916 - 23785
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  23916 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 23817  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  23816 aatttctcttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 32114474 - 32114605
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  32114474 atactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 32114573  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  32114574 aatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 3304278 - 3304408
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| |||||||||||||  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3304377  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  3304378 atttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 326
Target Start/End: Original strand, 2890159 - 2890292
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||    
T  2890159 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 2890258  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||||||| ||||    
T  2890259 taaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 196 - 329
Target Start/End: Complemental strand, 6552785 - 6552652
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6552686  T
Q  296 atgtcttttattaatagaaccggagggagtaata 329  Q
    || ||| |||| ||||| |||||||| |||||||    
T  6552685 atttctcttataaataggaccggaggtagtaata 6552652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 54610 - 54742
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  54610 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 54709  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||| ||||    
T  54710 aaatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 7785777 - 7785908
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  7785777 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7785876  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  7785877 aatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 8587301 - 8587170
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||| |||| |||||||||||||||| | | ||| ||||| ||||  |||||||||| ||||| ||||| ||| ||||| ||||||||||||||||| |    
T  8587301 atacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaa 8587202  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    | | ||| |||| ||||| |||||||||||||    
T  8587201 actttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 326
Target Start/End: Original strand, 32211354 - 32211493
Alignment:
Q  187 aatattatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttg 286  Q
    ||||||| |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | |||||    
T  32211354 aatattaaatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttg 32211453  T
Q  287 ttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||| |||| ||| |||| ||||| |||||||| ||||    
T  32211454 ttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 39571202 - 39571335
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | |    
T  39571202 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatcta 39571301  T
Q  295 aatgtcttttattaatagaaccggagggagtaat 328  Q
    ||| ||| |||| ||||| |||||||| ||||||    
T  39571302 aatttctcttataaataggaccggaggtagtaat 39571335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 7805698 - 7805829
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||||||||| |||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  7805698 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7805797  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  7805798 aatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 12763653 - 12763784
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  12763653 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12763752  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||  |||||||| ||||    
T  12763753 aatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 43199353 - 43199484
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  43199353 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 43199452  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  43199453 aatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 44498186 - 44498317
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||| ||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  44498186 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44498285  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  44498286 aatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 326
Target Start/End: Original strand, 25600996 - 25601130
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgac 291  Q
    ||||||||||||| |||| ||||||||||| |  |||||||||||||||  | |||||||| ||||| ||||  ||||||||| ||  ||||||||||||    
T  25600996 tatatactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 25601095  T
Q  292 ccaaatgtcttttattaatagaaccggagggagta 326  Q
    | |||| ||| |||| ||||| | |||||| ||||    
T  25601096 ctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 31654743 - 31654613
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||| |||| |||| ||||||||| | |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31654644  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||||||||    
T  31654643 atttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 30171613 - 30171483
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||| |||||||  |||||||||||||||||  |||||||||||  |||||||||  |||| ||||||| |||| || || ||||||||||||| ||    
T  30171613 atactccgtctggtcccatttataagaaacatttaagtcaacaaaatgcgatgtatctgattaagaatttggaccaagtacattaacttttgttgactca 30171514  T
Q  295 aatgtcttttattaatagaaccggagggagt 325  Q
    ||  ||| || | ||||| | ||||||||||    
T  30171513 aaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 33289261 - 33289391
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||| |||||| | ||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaa 33289360  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  33289361 atttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 12343150 - 12343271
Alignment:
Q  206 ggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtctttta 305  Q
    |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||    
T  12343150 ggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 12343249  T
Q  306 ttaatagaaccggagggagtaa 327  Q
    | ||||| |||||||| |||||    
T  12343250 taaataggaccggaggtagtaa 12343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 7012302 - 7012171
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||| |||| |||| ||||||||||| |  ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | |    
T  7012302 atacttcctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatcta 7012203  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  7012202 aatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 15888367 - 15888482
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| |||    
T  15888367 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaat 15888466  T
Q  311 agaaccggagggagta 326  Q
    || |||||||| ||||    
T  15888467 aggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 12300509 - 12300589
Alignment:
Q  210 ttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttga 290  Q
    |||||| ||||||||||||   |||||||||| ||||||||||  |||| ||||||  ||||||| |||||||||||||||    
T  12300509 ttatttttaagaaacatttatttcaacaaaatgtgatgtatctgattaagaatttgaaccaaatagatcaacttttgttga 12300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 4460600 - 4460525
Alignment:
Q  199 tccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata 274  Q
    |||||| |||| ||| | |||||||||||| |||||||||||| ||||||||||  |||| ||||||| |||||||    
T  4460600 tccctccggtcctatatttaagaaacatttcggtcaacaaaatgtgatgtatctgattaagaatttggaccaaata 4460525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 13578972 - 13578857
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  |||||| |||||| |||| ||| |||| |||    
T  13578972 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaat 13578873  T
Q  311 agaaccggagggagta 326  Q
    ||||| ||||| ||||    
T  13578872 agaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 31654693 - 31654745
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||| ||||||    
T  31654693 atcaacttttgttgacccaaaattcttttataaataggaccggaggaagtaat 31654745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 28463671 - 28463616
Alignment:
Q  266 gtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagg 321  Q
    ||||||||| |||||||||||||||||||| | ||| |||| ||||| ||||||||    
T  28463671 gtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 54662 - 54612
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  54662 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 2890212 - 2890162
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  2890212 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 6552735 - 6552785
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6552735 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 7785828 - 7785778
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  7785828 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 15888402 - 15888352
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| |||||||| ||||||||||    
T  15888402 atcaacttttgttgacccaaaattctcttataaatagaactggagggagta 15888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 33289311 - 33289261
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  33289311 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 39571253 - 39571203
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  39571253 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 17007027 - 17006914
Alignment:
Q  210 ttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaa 309  Q
    |||||||||||| | ||||  ||||| ||||  ||||||||||  |||| ||||  ||||| ||  |||||||||||||||||||| | ||| |||| ||    
T  17007027 ttatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaa 17006928  T
Q  310 tagaaccggaggga 323  Q
    ||| | ||||||||    
T  17006927 taggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 17570220 - 17570333
Alignment:
Q  210 ttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaa 309  Q
    |||||||||||| | ||||  ||||| ||||  ||||||||||  |||| ||||  ||||| ||  |||||||||||||||||||| | ||| |||| ||    
T  17570220 ttatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaa 17570319  T
Q  310 tagaaccggaggga 323  Q
    ||| | ||||||||    
T  17570320 taggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 27422321 - 27422242
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatg-atgtatcttgttaataatttggtccaaata 274  Q
    |||||||||  |||| ||||||||||| | |||||||||||||||| ||| |||||||| ||||| ||||  |||||||||    
T  27422321 atactcccttcggtcctatttataagagaaatttgggtcaacaaaa-atgaatgtatctggttaaaaattcagtccaaata 27422242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 33057726 - 33057662
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaa 258  Q
    |||||||| || |||||||||||||||| | | || |||||||||||  |||||||||| |||||    
T  33057726 tatactccatccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaa 33057662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 9395481 - 9395347
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  9395481 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 9395382  T
Q  295 aatgtcttttattaatagaaccggagggagtaata 329  Q
    ||| ||| |||| ||||| |||||||| |||||||    
T  9395381 aatttctcttataaataggaccggaggtagtaata 9395347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 13103155 - 13103024
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |    
T  13103155 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13103056  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  13103055 aatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 36563537 - 36563668
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  36563537 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 36563636  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| | |||||| ||||    
T  36563637 aatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 41989406 - 41989537
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  41989406 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41989505  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||  ||||| |||||||| ||||    
T  41989506 aatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 37148955 - 37149085
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||| | |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37149054  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  37149055 atttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 327
Target Start/End: Complemental strand, 11795300 - 11795167
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    |||||||||||  ||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  11795300 tatactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 11795201  T
Q  294 aaatgtcttttattaatagaaccggagggagtaa 327  Q
    |||| ||| |||| ||||| | |||||| |||||    
T  11795200 aaatttctcttataaataggatcggaggtagtaa 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 13033182 - 13033051
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| | || ||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |    
T  13033182 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13033083  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  13033082 aatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 23360072 - 23359942
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||| |||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| ||| |||| ||||    
T  23359972 atttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 17025756 - 17025624
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||  ||||| ||  |||||||| ||||     
T  17025756 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacct 17025657  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||| ||||    
T  17025656 aaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 20848203 - 20848069
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| | |||| || ||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||| |||||| ||    
T  20848203 tactccctccggtcctatttataagaga-attttgggcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 20848105  T
Q  296 atgtcttttattaatagaaccggagggagtaataag 331  Q
    || ||| |||| ||||| |||||||| |||| ||||    
T  20848104 atttctcttataaataggaccggaggtagtattaag 20848069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 6126954 - 6126876
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata 274  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||| |||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaata 6126876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 583089 - 582989
Alignment:
Q  226 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 325  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||| |||||||| |||| ||| |||| ||||| |||||||| |||    
T  583089 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagt 582990  T
Q  326 a 326  Q
    |    
T  582989 a 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 297
Target Start/End: Complemental strand, 21576079 - 21575975
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  ||||| |||||||||  ||||||||||  |||| ||||  ||||||||| ||  |||||||||||||    
T  21576079 atatactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacc 21575980  T
Q  293 caaat 297  Q
     ||||    
T  21575979 taaat 21575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 26350349 - 26350480
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||| | |  ||||  |||| ||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  26350349 atactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26350448  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| | |||||||||||    
T  26350449 aatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 37149005 - 37148951
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 330  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  37149005 atcaacttttgttgacccaaaattctattataaataggaccggagggagtaataa 37148951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 37642086 - 37641953
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata-aatcaacttttgttgacc 292  Q
    ||||||||||| |||| ||||||||||| |  |||||||||| ||||  |||||||||| ||||| ||||  ||||| ||| | |||  |||| ||||||    
T  37642086 tatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacc 37641987  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||||||| ||||    
T  37641986 taaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 11574114 - 11574210
Alignment:
Q  230 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||  | |||||||| ||||| || |||| ||| |||  |||| ||||||||||| |||||||| |||| ||||| ||||||| |||||    
T  11574114 ggtcaacaaaagttaatgtatctagttaacaaattggaccagatatttcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 326
Target Start/End: Complemental strand, 4444087 - 4443960
Alignment:
Q  199 tccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatg 298  Q
    |||||| |||||||||||||||| |  ||| | |||||||||  ||||||||||  |||| ||||  ||| ||||| ||  ||||||||||||| ||||     
T  4444087 tccctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatt 4443988  T
Q  299 tcttttattaatagaaccggagggagta 326  Q
    ||| |||| ||||| |||| ||| ||||    
T  4443987 tctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 6126904 - 6126954
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6126904 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 9395430 - 9395480
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9395430 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 13103104 - 13103154
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  13103104 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 17025704 - 17025754
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  17025704 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 36563588 - 36563538
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  36563588 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 41989457 - 41989407
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  41989457 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 583069 - 583121
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 329  Q
    |||||||||||||||||||||  ||||||||| |||| | ||||||||||||||    
T  583069 atcaacttttgttgacccaaaattcttttatt-ataggatcggagggagtaata 583121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 2629561 - 2629645
Alignment:
Q  213 tttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaat 297  Q
    ||||||||||||||||| ||||| ||||| |||||||| | ||||| || || |  || ||| || |||||||||||||| ||||    
T  2629561 tttataagaaacatttgagtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaat 2629645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 34080030 - 34080160
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||||||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaa 34080129  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  34080130 atttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 34988205 - 34988075
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||||| ||||| |||||||| |  |||||||||| ||||| ||  ||| ||| ||| ||||||||||||||||||||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaa 34988106  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    |||||| | || ||||| |||| ||||||||    
T  34988105 atgtctctaataaataggaccgaagggagta 34988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 37509053 - 37508921
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    |||||| |||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  37509053 tatactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37508954  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||||||||    
T  37508953 aaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 49823379 - 49823511
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  49823379 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 49823478  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||| ||||    
T  49823479 aaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 10298110 - 10297979
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  10298110 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 10298011  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  10298010 aatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 17653843 - 17653712
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||| |||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 17653744  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||||||||    
T  17653743 aatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 19557052 - 19557182
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 19557151  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  19557152 atttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 192 - 326
Target Start/End: Complemental strand, 51406807 - 51406673
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgac 291  Q
    ||||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||    
T  51406807 tatatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 51406708  T
Q  292 ccaaatgtcttttattaatagaaccggagggagta 326  Q
    | |||| ||| |||| ||||  |||||||| ||||    
T  51406707 ctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 22722064 - 22721931
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    ||||||||| || |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||    
T  22722064 atatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 22721965  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||||||| ||||    
T  22721964 taaatttctcttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 46208162 - 46208030
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||  |||| ||||  ||||||||| ||  |||||||||||||     
T  46208162 tatactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 46208063  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||||||||    
T  46208062 aaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 211 - 311
Target Start/End: Complemental strand, 53275410 - 53275310
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||||| |||  |||||||||||||||||||||||  |||| |||||||   ||||| ||||| |||||||||||||||| |||||||| |||    
T  53275410 tatttataagaaatattaaggtcaacaaaatatgatgtatctaattaagaatttggattaaatacatcaatttttgttgacccaaatatcttttataaat 53275311  T
Q  311 a 311  Q
    |    
T  53275310 a 53275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 9213646 - 9213516
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||||||||  ||| ||||||| ||| | |||| |||||||||||  |||||||| | ||||  || || ||||| ||| ||||||||||||||||  ||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    ||||||||||| ||||| |||||||||||||    
T  9213546 atgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 48340527 - 48340397
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 48340428  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| || | ||||| |||||||| ||||    
T  48340427 atttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 40690995 - 40691120
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||| ||| |    
T  40690995 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaaccta 40691094  T
Q  295 aatgtcttttattaatagaaccggag 320  Q
    ||| ||| |||| ||||| |||||||    
T  40691095 aatttctcttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 2787832 - 2787956
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  ||||||||| |||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2787931  T
Q  296 atgtcttttattaatagaaccggag 320  Q
    || ||| |||| ||||| |||||||    
T  2787932 atttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 8437557 - 8437425
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||| ||||||||||| |  |||| ||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||| ||||||     
T  8437557 tatactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 8437458  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    |||| ||| |||| ||||| |||||||| ||||    
T  8437457 aaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 4238725 - 4238594
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||| |||| |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 4238626  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  4238625 aatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 8817385 - 8817516
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    ||||||| || |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  8817385 atactccttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 8817484  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||| ||| ||||    
T  8817485 aatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 33942947 - 33943062
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| | | ||||||||||||||  |||||||||| ||||| ||||  ||||||||| || |||||||||||||| || | |||||||| |||    
T  33942947 tatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaat 33943046  T
Q  311 agaaccggagggagta 326  Q
    || | |||| ||||||    
T  33943047 aggatcggaaggagta 33943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 36095679 - 36095810
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||| ||| ||||||||||| |||| |  ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  36095679 atactcactccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 36095778  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| | | |||| ||||| |||||||||||||    
T  36095779 aatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 42507358 - 42507485
Alignment:
Q  199 tccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatg 298  Q
    |||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||| | ||||  ||||||||| ||  ||||||||||||| ||||     
T  42507358 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatt 42507457  T
Q  299 tcttttattaatagaaccggagggagta 326  Q
    ||| |||| ||||| |||||||| ||||    
T  42507458 tctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 44785411 - 44785526
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| |||    
T  44785411 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44785510  T
Q  311 agaaccggagggagta 326  Q
    || |||||||| ||||    
T  44785511 aggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 21295326 - 21295456
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| ||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaa 21295425  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  21295426 atttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 38964522 - 38964392
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | ||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 38964423  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  38964422 atttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 42170346 - 42170476
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||||| ||||||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| ||    
T  42170346 tactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaa 42170445  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||  |||||||| ||||    
T  42170446 atttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 326
Target Start/End: Original strand, 9111491 - 9111624
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    ||||| |||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  |||||||||||||    
T  9111491 atatattccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacc 9111590  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| |||| ||| ||||    
T  9111591 taaatttctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 53275287 - 53275349
Alignment:
Q  188 atattatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtat 250  Q
    |||||||||||||||| |||| |||||||||| | | ||||||||||||||||  ||||||||    
T  53275287 atattatatactccctttggtattatttataaaagatatttgggtcaacaaaaattgatgtat 53275349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 2131699 - 2131804
Alignment:
Q  223 acatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggaggg 322  Q
    ||||||||||||||||||  |  |||| || ||  | ||||| | ||| ||| |||||||||||||||||||||||||| | || | ||| |||||||||    
T  2131699 acatttgggtcaacaaaagttactgtacctggtgcaaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggaggg 2131798  T
Q  323 agtaat 328  Q
    ||||||    
T  2131799 agtaat 2131804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 35513556 - 35513471
Alignment:
Q  243 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||| ||||||||||    
T  35513556 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagtaat 35513471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 48340477 - 48340529
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  48340477 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 48340529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 6013336 - 6013463
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||    || ||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  6013336 tactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6013435  T
Q  296 atgtcttttattaatagaaccggaggga 323  Q
    || ||| |||| ||| | || |||||||    
T  6013436 atttctcttataaattggactggaggga 6013463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 10298059 - 10298109
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  10298059 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 19557102 - 19557052
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  19557102 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 34080080 - 34080030
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  34080080 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 40691046 - 40690996
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  40691046 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 42507405 - 42507351
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 330  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||| ||||||    
T  42507405 atcaacttttgttgacccaaaattctcttataaataggaccggagggaataataa 42507351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 44785446 - 44785396
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||| ||||    
T  44785446 atcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 49823431 - 49823381
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  49823431 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 2131802 - 2131697
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| || |||| ||| ||||||||||||||||||  |||||||||| ||  | | ||||  |||  || |  |||||||||||||||||    
T  2131802 tactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctggtctaaattttgcaccaggtacagtaacttttgttgacccaa 2131703  T
Q  296 atgtct 301  Q
    ||||||    
T  2131702 atgtct 2131697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 297
Target Start/End: Original strand, 5237536 - 5237640
Alignment:
Q  192 tatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgac 291  Q
    |||||||||| |||| |||||||||||| | || |||   |||||||||  ||||||||||  || | ||||||||| | ||| || |||||||||||||    
T  5237536 tatatactccttctgatcttatttataaaagacgtttttttcaacaaaaattgatgtatctaattcaaaatttggtctagatatat-aacttttgttgac 5237634  T
Q  292 ccaaat 297  Q
    ||||||    
T  5237635 ccaaat 5237640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 5323279 - 5323340
Alignment:
Q  268 ccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 329  Q
    ||||||| |||||||||||||||||||||| |   |||| ||||| | ||||||||||||||    
T  5323279 ccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagtaata 5323340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 6013382 - 6013333
Alignment:
Q  280 acttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 329  Q
    |||||||||||||||||  ||| |||| ||||| ||||||||||||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagtaata 6013333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 9027141 - 9027210
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataattt 264  Q
    |||||||||| |||| ||||||||||| | | ||||||||||||||  |||||||||  ||||| |||||    
T  9027141 atactccctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatcaggttaacaattt 9027210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 21663035 - 21663003
Alignment:
Q  196 tactccctctggtcttatttataagaaacattt 228  Q
    ||||||||| |||||||||||||||||||||||    
T  21663035 tactccctccggtcttatttataagaaacattt 21663003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 43323143 - 43323091
Alignment:
Q  243 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    |||||||| | ||||| |||||  |||||||| ||||||||||||||||||||    
T  43323143 tgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaa 43323091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 6130 - 6261
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||  |||||||||| ||||| ||||  ||||| ||| ||  ||||||||||||| |    
T  6130 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgaccta 6229  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  6230 aatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 11897185 - 11897054
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||  |||||||||  ||||| ||||  || || ||| ||||||||||||||||| |    
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgaccta 11897086  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    | | ||| |||| ||||| |||||||||||||    
T  11897085 actttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 329
Target Start/End: Original strand, 47216697 - 47216832
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccc 293  Q
    ||||||||||| |||  ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||||||||||     
T  47216697 tatactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 47216796  T
Q  294 aaatgtcttttattaatagaaccggagggagtaata 329  Q
    |||| ||| |||| ||||| |||||||| |||||||    
T  47216797 aaatttctcttataaataggaccggaggtagtaata 47216832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 27159358 - 27159488
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 27159457  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  27159458 atttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 31842795 - 31842925
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31842894  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  31842895 atttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 39401966 - 39402096
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 39402065  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  39402066 atttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 44668093 - 44668223
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44668192  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  44668193 atttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 14984968 - 14984843
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  14984968 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 14984869  T
Q  295 aatgtcttttattaatagaaccggag 320  Q
    ||| ||| |||| ||||| |||||||    
T  14984868 aatttctcttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 326
Target Start/End: Complemental strand, 9981774 - 9981647
Alignment:
Q  199 tccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatg 298  Q
    |||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||||     
T  9981774 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 9981675  T
Q  299 tcttttattaatagaaccggagggagta 326  Q
    ||| |||| ||||| |||||||| ||||    
T  9981674 tctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 11796063 - 11795933
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||  ||  ||||||||||||| ||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 11795964  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  11795963 atttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 26471065 - 26471195
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| ||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26471164  T
Q  296 atgtcttttattaatagaaccggagggagta 326  Q
    || ||| |||| ||||| |||||||| ||||    
T  26471165 atttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 1051019 - 1050886
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||||||||||| |||  |||||||||| ||||| ||||  ||||||||  ||  ||||||||||||| |    
T  1051019 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgaccta 1050920  T
Q  295 aatgtcttttattaatagaaccggagggagtaat 328  Q
    ||| ||| |||| ||||| |||||||| ||||||    
T  1050919 aatttctcttataaataggaccggaggtagtaat 1050886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 17556884 - 17556752
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata-aatcaacttttgttgaccc 293  Q
    |||||||||| |||| ||||||||||| | | ||||||||||||||  |||||||||| ||||| ||||  ||||||||| | | ||||||||||||||     
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacct 17556785  T
Q  294 aaatgtcttttattaatagaaccggagggagta 326  Q
    || | ||| |||| ||||| ||| |||||||||    
T  17556784 aactttctcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 334
Target Start/End: Original strand, 12483627 - 12483766
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||| | ||| | ||||  ||| ||||| ||  ||||||||||||| |    
T  12483627 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgaccta 12483726  T
Q  295 aatgtcttttattaatagaaccggagggagtaataagtta 334  Q
    ||| ||| |||| ||||| |||||||| |||| |||||||    
T  12483727 aatttctcttataaataggaccggaggtagtattaagtta 12483766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 34042827 - 34042696
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||  ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |    
T  34042827 atactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 34042728  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  34042727 aatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 47777481 - 47777603
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 295  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||| | ||||  ||||||||| ||  ||||||||||||| ||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaa 47777580  T
Q  296 atgtcttttattaatagaaccgg 318  Q
    || ||| |||| ||||| |||||    
T  47777581 atttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 16448139 - 16448238
Alignment:
Q  227 ttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||||||||||||  | |||||||| ||| | ||||  ||||| ||| |||||||||||||||||||| | ||| |||| ||||| |||||||||||||    
T  16448139 ttgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 328
Target Start/End: Original strand, 44955216 - 44955338
Alignment:
Q  206 ggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtctttta 305  Q
    |||| ||||||||||| |  ||| |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| | | |||    
T  44955216 ggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttctta 44955315  T
Q  306 ttaatagaaccggagggagtaat 328  Q
    | ||||| |||||||| ||||||    
T  44955316 taaataggaccggaggtagtaat 44955338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 326
Target Start/End: Complemental strand, 25694452 - 25694319
Alignment:
Q  193 atatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    |||||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  |||||| |||| |    
T  25694452 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatc 25694353  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
     |||| ||| |||| ||||| | | |||||||||    
T  25694352 taaatttctcttataaataggatcagagggagta 25694319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 37552273 - 37552141
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatg-atgtatcttgttaataatttggtccaaataaatcaacttttgttgacc 292  Q
    ||||||||| | |||| ||||||||||| | |||||||||||||||| ||| |||||||| ||||| ||||  ||||| ||| || |||| ||||||||     
T  37552273 tatactccccccggtcctatttataagagaaatttgggtcaacaaaa-atgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgact 37552175  T
Q  293 caaatgtcttttattaatagaaccggagggagta 326  Q
    ||| | | | |||| ||||| |||||||||||||    
T  37552174 caactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 23278031 - 23278131
Alignment:
Q  226 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 325  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  23278031 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagt 23278130  T
Q  326 a 326  Q
    |    
T  23278131 a 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 47588336 - 47588452
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||  ||| |||||||||||| |  |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |    
T  47588336 atactcccttcggttttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgaccta 47588435  T
Q  295 aatgtcttttattaata 311  Q
    ||| ||| |||| ||||    
T  47588436 aatttctcttataaata 47588452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 47969826 - 47969694
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||| | |  ||||| |||||||||  |||||||||| ||||| ||||  ||| ||||| ||  ||||||||||||| |    
T  47969826 atactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgaccta 47969727  T
Q  295 aatgtct-tttattaatagaaccggagggagta 326  Q
    ||| ||| ||||| ||||| ||||||| |||||    
T  47969726 aatttctctttataaataggaccggagagagta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 11897134 - 11897184
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  11897134 atcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 11989853 - 11989915
Alignment:
Q  268 ccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 330  Q
    ||||||| ||||| |||| ||||| ||||| |||||||| ||||| |||||||||||||||||    
T  11989853 ccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagtaataa 11989915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 34042776 - 34042826
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||||||||    
T  34042776 atcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 39402016 - 39401963
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 329  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||    
T  39402016 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 39401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 12483684 - 12483628
Alignment:
Q  270 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||| |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 31842845 - 31842793
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  31842845 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 31842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 47777531 - 47777479
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  47777531 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 47777479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 11796013 - 11796064
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 327  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||    
T  11796013 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 11796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 312
Target Start/End: Complemental strand, 12043723 - 12043618
Alignment:
Q  206 ggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtctttta 305  Q
    |||| ||||||||||||| ||||   |||||||||  | |||||||||||||| ||||   || ||||| ||||||||||||||||  |||| |||||||    
T  12043723 ggtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaattgaatc-aaatacatcaacttttgttgacttaaatatctttta 12043625  T
Q  306 ttaatag 312  Q
    | |||||    
T  12043624 taaatag 12043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 14984917 - 14984967
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  14984917 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 16448240 - 16448182
Alignment:
Q  194 tatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatct 252  Q
    ||||||||||| |||| ||||||||||| | | ||||||||||||||  ||||||||||    
T  16448240 tatactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 17556833 - 17556883
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||| | ||| |||| ||||| |||||||||||||    
T  17556833 atcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 25694399 - 25694449
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  25694399 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 27159408 - 27159358
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  27159408 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 40676799 - 40676833
Alignment:
Q  206 ggtcttatttataagaaacatttgggtcaacaaaa 240  Q
    ||||||||||||||||||||||| |||||||||||    
T  40676799 ggtcttatttataagaaacattttggtcaacaaaa 40676833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 44668143 - 44668093
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  44668143 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 47216749 - 47216699
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  47216749 atcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 38040267 - 38040308
Alignment:
Q  188 atattatatactccctctggtcttatttataagaaacatttg 229  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  38040267 atattatatactcccttcggtcctatttataagaaacatttg 38040308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 47588468 - 47588423
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaa 240  Q
    ||||| ||||||||||||||||||||| | |||| |||||||||||    
T  47588468 atactacctctggtcttatttataagagaaatttaggtcaacaaaa 47588423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 19610779 - 19610867
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaactt 283  Q
    ||||||||||| ||| | ||||||||| |||  |||||||||||||  |||||||| | ||| ||||| ||| | ||||| ||||||||    
T  19610779 atactccctcttgtcctttttataagatacaaatgggtcaacaaaaattgatgtatttagttcataatatggactaaatacatcaactt 19610867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 26471115 - 26471063
Alignment:
Q  276 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 328  Q
    ||||||||||||||| |||||  ||| |||| ||||| |||||||||||||||    
T  26471115 atcaacttttgttgatccaaaattctcttataaataggaccggagggagtaat 26471063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 190 - 326
Target Start/End: Complemental strand, 49641 - 49505
Alignment:
Q  190 attatatactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttg 289  Q
    ||||| ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||| | ||||| ||||  ||||||||| ||  ||||||||||    
T  49641 attatttactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttg 49542  T
Q  290 acccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||| |||| ||| |||| ||||| |||||||| ||||    
T  49541 acctaaatttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 49579 - 49636
Alignment:
Q  270 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 327  Q
    ||||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 49636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 326
Target Start/End: Complemental strand, 12991 - 12860
Alignment:
Q  195 atactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgaccca 294  Q
    |||||||||| |||| ||||||||||| |  ||||||||| |||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |    
T  12991 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12892  T
Q  295 aatgtcttttattaatagaaccggagggagta 326  Q
    ||| ||| |||| ||||| |||||||| ||||    
T  12891 aatttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 323
Target Start/End: Original strand, 12370 - 12480
Alignment:
Q  213 tttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatag 312  Q
    |||||||||||||||  |||||||||||| |||||||||| ||||| ||||| | ||||| | | |||||||| |||||| |||| ||| |||| |||||    
T  12370 tttataagaaacattcaggtcaacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaatag 12469  T
Q  313 aaccggaggga 323  Q
     ||||||||||    
T  12470 gaccggaggga 12480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 211 - 319
Target Start/End: Complemental strand, 1450 - 1342
Alignment:
Q  211 tatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaat 310  Q
    ||||||||||| |  |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| |||    
T  1450 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1351  T
Q  311 agaaccgga 319  Q
    || ||||||    
T  1350 aggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 20 - 114
Alignment:
Q  231 gtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 326  Q
    ||||||||||  |||||||| | ||||| ||||| ||||||||| ||||||||||||||||| |  | || | ||| |||||||||||||||||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttc-tctataaatagaaccggagggagta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 30008 - 30099
Alignment:
Q  196 tactccctctggtcttatttataagaaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgtt 288  Q
    |||||||| || || || |||||| ||||||||  ||||| |||| ||||||||||| ||||| ||||| | ||||||| ||| |||||||||    
T  30008 tactccctatgttcataattataa-aaacatttatgtcaataaaagatgatgtatctagttaagaatttagaccaaatacatctacttttgtt 30099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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