View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3527_low_23 (Length: 235)

Name: NF3527_low_23
Description: NF3527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3527_low_23
NF3527_low_23
[»] chr2 (55 HSPs)
chr2 (171-235)||(5470478-5470542)
chr2 (170-235)||(37431652-37431717)
chr2 (170-235)||(39918543-39918608)
chr2 (170-227)||(43028910-43028967)
chr2 (170-226)||(4576683-4576739)
chr2 (171-235)||(5008429-5008493)
chr2 (171-235)||(14943686-14943750)
chr2 (171-227)||(36195720-36195776)
chr2 (170-220)||(8553684-8553734)
chr2 (172-230)||(25333612-25333670)
chr2 (85-146)||(5470394-5470454)
chr2 (170-223)||(19399317-19399370)
chr2 (170-223)||(34679218-34679271)
chr2 (171-235)||(6592835-6592899)
chr2 (170-230)||(14489327-14489387)
chr2 (170-226)||(24472587-24472643)
chr2 (170-225)||(4925558-4925613)
chr2 (171-230)||(15022952-15023011)
chr2 (172-219)||(34123366-34123413)
chr2 (172-219)||(35698993-35699040)
chr2 (172-219)||(42445497-42445544)
chr2 (85-143)||(27489625-27489683)
chr2 (170-224)||(37803242-37803296)
chr2 (171-224)||(2609230-2609283)
chr2 (170-219)||(2936928-2936977)
chr2 (170-235)||(19895754-19895819)
chr2 (172-225)||(25411660-25411713)
chr2 (171-224)||(31827646-31827699)
chr2 (170-235)||(44617879-44617944)
chr2 (170-226)||(5362315-5362371)
chr2 (170-230)||(6510113-6510173)
chr2 (170-230)||(18969234-18969294)
chr2 (170-230)||(27489546-27489606)
chr2 (171-235)||(34760956-34761020)
chr2 (172-219)||(11362702-11362749)
chr2 (172-219)||(19025958-19026005)
chr2 (172-219)||(19256713-19256760)
chr2 (172-219)||(21552682-21552729)
chr2 (172-219)||(21568050-21568097)
chr2 (172-219)||(24858017-24858064)
chr2 (172-219)||(25888032-25888079)
chr2 (172-219)||(31784392-31784439)
chr2 (172-219)||(34981509-34981556)
chr2 (172-219)||(40493771-40493818)
chr2 (174-224)||(18709399-18709449)
chr2 (170-224)||(25092415-25092469)
chr2 (170-224)||(41196370-41196424)
chr2 (172-205)||(1374937-1374970)
chr2 (85-126)||(6592940-6592981)
chr2 (46-75)||(14489498-14489527)
chr2 (172-205)||(24205437-24205470)
chr2 (174-219)||(39620691-39620736)
chr2 (174-219)||(45395382-45395427)
chr2 (172-204)||(20436194-20436226)
chr2 (47-75)||(32969815-32969843)
[»] chr8 (56 HSPs)
chr8 (172-234)||(6807311-6807373)
chr8 (170-235)||(16982751-16982816)
chr8 (171-224)||(30539132-30539185)
chr8 (170-230)||(23702275-23702335)
chr8 (170-225)||(3676268-3676323)
chr8 (170-235)||(29044687-29044752)
chr8 (170-235)||(45177310-45177375)
chr8 (171-235)||(22846552-22846616)
chr8 (170-210)||(37263494-37263534)
chr8 (176-219)||(27339668-27339711)
chr8 (171-226)||(27545457-27545512)
chr8 (172-223)||(33298460-33298511)
chr8 (170-229)||(35213169-35213228)
chr8 (177-235)||(41487357-41487415)
chr8 (5-71)||(6807129-6807195)
chr8 (170-235)||(14880444-14880508)
chr8 (170-211)||(17071047-17071088)
chr8 (170-211)||(17577184-17577225)
chr8 (172-225)||(20057120-20057173)
chr8 (97-146)||(23702204-23702253)
chr8 (85-146)||(30539055-30539116)
chr8 (186-235)||(37813247-37813296)
chr8 (172-219)||(995135-995182)
chr8 (172-219)||(1985710-1985757)
chr8 (172-219)||(2321641-2321688)
chr8 (176-219)||(4132879-4132922)
chr8 (172-219)||(6641739-6641786)
chr8 (172-219)||(6745135-6745182)
chr8 (172-207)||(8834080-8834115)
chr8 (172-219)||(20095828-20095875)
chr8 (171-230)||(22192439-22192498)
chr8 (172-219)||(23233921-23233968)
chr8 (172-219)||(28596055-28596102)
chr8 (172-219)||(32318630-32318677)
chr8 (172-219)||(32332282-32332329)
chr8 (172-219)||(35735628-35735675)
chr8 (172-219)||(37953499-37953546)
chr8 (172-219)||(38166609-38166656)
chr8 (172-219)||(39626109-39626156)
chr8 (172-219)||(39635659-39635706)
chr8 (172-219)||(41625585-41625632)
chr8 (172-219)||(41788776-41788823)
chr8 (170-224)||(9762320-9762374)
chr8 (172-218)||(16531390-16531436)
chr8 (174-219)||(4167344-4167389)
chr8 (172-205)||(6014559-6014592)
chr8 (171-224)||(29657824-29657877)
chr8 (85-146)||(35213095-35213156)
chr8 (174-219)||(36788403-36788448)
chr8 (172-205)||(42524849-42524882)
chr8 (172-205)||(44886045-44886078)
chr8 (172-205)||(45209115-45209148)
chr8 (170-226)||(25144060-25144116)
chr8 (171-235)||(25897078-25897141)
chr8 (85-145)||(41487398-41487457)
chr8 (86-126)||(45177414-45177454)
[»] chr5 (57 HSPs)
chr5 (170-235)||(12406180-12406245)
chr5 (170-235)||(31080585-31080650)
chr5 (170-230)||(27904623-27904683)
chr5 (178-228)||(30604235-30604285)
chr5 (170-235)||(3333841-3333906)
chr5 (170-235)||(26702544-26702609)
chr5 (170-235)||(26972277-26972342)
chr5 (170-230)||(9852900-9852960)
chr5 (170-230)||(32391859-32391919)
chr5 (176-235)||(2974742-2974801)
chr5 (170-225)||(20629884-20629939)
chr5 (170-224)||(43098167-43098221)
chr5 (170-235)||(3999238-3999303)
chr5 (174-227)||(24405606-24405659)
chr5 (170-235)||(25910832-25910897)
chr5 (170-230)||(6130398-6130458)
chr5 (170-230)||(16132858-16132918)
chr5 (170-230)||(20512310-20512370)
chr5 (170-230)||(22300714-22300774)
chr5 (86-145)||(20512264-20512322)
chr5 (172-219)||(25566744-25566791)
chr5 (172-219)||(34082243-34082290)
chr5 (170-220)||(36798294-36798344)
chr5 (172-225)||(8340101-8340154)
chr5 (173-230)||(18403100-18403157)
chr5 (170-223)||(21066460-21066513)
chr5 (170-235)||(26563097-26563162)
chr5 (172-225)||(28736559-28736612)
chr5 (170-226)||(19340904-19340960)
chr5 (85-145)||(27904671-27904730)
chr5 (48-136)||(30603642-30603730)
chr5 (86-146)||(37897785-37897845)
chr5 (172-219)||(3020735-3020782)
chr5 (172-219)||(4125585-4125632)
chr5 (172-219)||(7623661-7623708)
chr5 (172-219)||(8755138-8755185)
chr5 (172-219)||(11480176-11480223)
chr5 (172-219)||(16666698-16666745)
chr5 (172-219)||(22925763-22925810)
chr5 (170-225)||(24779392-24779447)
chr5 (172-219)||(28388122-28388169)
chr5 (172-219)||(28620164-28620211)
chr5 (172-219)||(33825725-33825772)
chr5 (172-219)||(34168929-34168976)
chr5 (172-219)||(34606511-34606558)
chr5 (172-219)||(35055902-35055949)
chr5 (171-230)||(37897859-37897918)
chr5 (171-230)||(40276170-40276229)
chr5 (172-219)||(40768013-40768060)
chr5 (172-219)||(42739728-42739775)
chr5 (170-224)||(35166415-35166469)
chr5 (172-205)||(22052578-22052611)
chr5 (172-205)||(26323516-26323549)
chr5 (172-205)||(33204080-33204113)
chr5 (193-229)||(19131663-19131699)
chr5 (176-220)||(24134492-24134536)
chr5 (86-126)||(25363893-25363933)
[»] chr4 (65 HSPs)
chr4 (170-235)||(43074728-43074793)
chr4 (170-235)||(2837008-2837073)
chr4 (170-235)||(20112290-20112355)
chr4 (170-230)||(1420684-1420744)
chr4 (171-235)||(53312396-53312460)
chr4 (171-230)||(23759715-23759774)
chr4 (170-235)||(14449424-14449489)
chr4 (170-235)||(34771412-34771477)
chr4 (171-235)||(2016900-2016963)
chr4 (179-235)||(10059846-10059902)
chr4 (170-230)||(29697635-29697695)
chr4 (170-226)||(54855421-54855477)
chr4 (170-229)||(26089584-26089643)
chr4 (170-224)||(4796180-4796234)
chr4 (177-230)||(11824301-11824354)
chr4 (170-223)||(21597542-21597595)
chr4 (170-235)||(25909596-25909661)
chr4 (170-235)||(31553382-31553447)
chr4 (170-235)||(49185678-49185743)
chr4 (170-230)||(18937380-18937440)
chr4 (170-230)||(27978805-27978865)
chr4 (172-219)||(20472674-20472721)
chr4 (170-235)||(6637203-6637268)
chr4 (170-235)||(35383899-35383964)
chr4 (170-235)||(35393409-35393474)
chr4 (176-229)||(47999644-47999697)
chr4 (173-226)||(51233598-51233651)
chr4 (170-235)||(51362648-51362713)
chr4 (171-224)||(51371583-51371636)
chr4 (170-230)||(2654109-2654169)
chr4 (170-230)||(12719585-12719645)
chr4 (174-230)||(21451571-21451627)
chr4 (170-222)||(42526103-42526155)
chr4 (172-219)||(104325-104372)
chr4 (172-219)||(232833-232880)
chr4 (172-219)||(6386856-6386903)
chr4 (170-225)||(6614984-6615039)
chr4 (172-219)||(7119719-7119766)
chr4 (172-219)||(7666339-7666386)
chr4 (172-219)||(8891779-8891826)
chr4 (172-219)||(17554170-17554217)
chr4 (176-219)||(23315524-23315567)
chr4 (172-219)||(28982038-28982085)
chr4 (172-219)||(29432188-29432235)
chr4 (172-219)||(34158614-34158661)
chr4 (172-219)||(37289580-37289627)
chr4 (172-219)||(37973638-37973685)
chr4 (172-219)||(39946219-39946266)
chr4 (172-219)||(40350961-40351008)
chr4 (172-219)||(41205637-41205684)
chr4 (172-219)||(45289641-45289688)
chr4 (172-219)||(50513170-50513217)
chr4 (170-229)||(50769478-50769537)
chr4 (172-219)||(52114260-52114307)
chr4 (172-219)||(52310943-52310990)
chr4 (170-224)||(8070745-8070799)
chr4 (85-146)||(6207243-6207304)
chr4 (170-223)||(16292389-16292442)
chr4 (85-146)||(23759627-23759687)
chr4 (97-146)||(29697708-29697757)
chr4 (172-205)||(39136438-39136471)
chr4 (170-235)||(44356538-44356603)
chr4 (85-145)||(2654157-2654216)
chr4 (172-220)||(35835918-35835966)
chr4 (170-234)||(53924891-53924955)
[»] chr3 (72 HSPs)
chr3 (170-235)||(578553-578618)
chr3 (170-235)||(44436538-44436603)
chr3 (171-235)||(51315625-51315689)
chr3 (170-235)||(33329757-33329822)
chr3 (49-146)||(44585818-44585915)
chr3 (171-230)||(48348400-48348459)
chr3 (170-224)||(1814697-1814751)
chr3 (170-227)||(44585926-44585983)
chr3 (170-230)||(25843479-25843539)
chr3 (170-230)||(28712568-28712628)
chr3 (170-230)||(44624737-44624797)
chr3 (171-235)||(54719138-54719202)
chr3 (172-235)||(36567016-36567079)
chr3 (170-224)||(36687731-36687785)
chr3 (170-224)||(43747420-43747474)
chr3 (170-235)||(19404534-19404599)
chr3 (170-230)||(20432324-20432384)
chr3 (170-230)||(36677651-36677711)
chr3 (171-235)||(38177285-38177349)
chr3 (170-230)||(44127462-44127522)
chr3 (170-226)||(46226815-46226871)
chr3 (170-224)||(1938436-1938490)
chr3 (170-224)||(3916549-3916603)
chr3 (170-235)||(86682-86747)
chr3 (86-147)||(4474255-4474316)
chr3 (170-235)||(7218291-7218356)
chr3 (170-219)||(38511796-38511845)
chr3 (170-223)||(52008365-52008418)
chr3 (170-234)||(3192883-3192947)
chr3 (172-219)||(257577-257624)
chr3 (172-219)||(787224-787271)
chr3 (172-219)||(3212293-3212340)
chr3 (172-219)||(5577058-5577105)
chr3 (170-229)||(12759648-12759707)
chr3 (172-219)||(19391776-19391823)
chr3 (172-219)||(27748369-27748416)
chr3 (172-219)||(27857276-27857323)
chr3 (172-219)||(28097565-28097612)
chr3 (172-219)||(28964295-28964342)
chr3 (176-219)||(29168853-29168896)
chr3 (172-219)||(30200555-30200602)
chr3 (172-219)||(30760956-30761003)
chr3 (172-219)||(31577544-31577591)
chr3 (172-219)||(32458924-32458971)
chr3 (172-219)||(32508060-32508107)
chr3 (172-219)||(33252626-33252673)
chr3 (172-219)||(33576550-33576597)
chr3 (172-219)||(33933492-33933539)
chr3 (172-219)||(41223637-41223684)
chr3 (172-219)||(41281988-41282035)
chr3 (172-219)||(47530464-47530511)
chr3 (172-219)||(50033382-50033429)
chr3 (172-219)||(51842926-51842973)
chr3 (172-219)||(53191086-53191133)
chr3 (172-219)||(53531947-53531994)
chr3 (176-230)||(14992777-14992831)
chr3 (177-227)||(25154298-25154348)
chr3 (96-146)||(43586642-43586692)
chr3 (85-146)||(25902469-25902529)
chr3 (172-205)||(32204988-32205021)
chr3 (171-224)||(35359116-35359169)
chr3 (46-75)||(38958131-38958160)
chr3 (105-146)||(43747365-43747406)
chr3 (170-235)||(44433205-44433269)
chr3 (172-205)||(51214300-51214333)
chr3 (89-145)||(86644-86699)
chr3 (47-75)||(14349396-14349424)
chr3 (172-204)||(17483699-17483731)
chr3 (172-204)||(27984274-27984306)
chr3 (170-226)||(28204626-28204682)
chr3 (48-76)||(44624886-44624914)
chr3 (170-230)||(54464276-54464336)
[»] chr7 (47 HSPs)
chr7 (171-234)||(4049819-4049882)
chr7 (170-235)||(36903371-36903436)
chr7 (171-235)||(8073983-8074047)
chr7 (170-229)||(18504358-18504417)
chr7 (170-230)||(18186591-18186651)
chr7 (170-230)||(28785895-28785955)
chr7 (170-230)||(35250232-35250292)
chr7 (173-235)||(6726398-6726460)
chr7 (88-146)||(35250306-35250364)
chr7 (170-231)||(44312883-44312944)
chr7 (170-230)||(41243756-41243816)
chr7 (172-219)||(21782744-21782791)
chr7 (178-224)||(17931878-17931924)
chr7 (170-224)||(36580415-36580469)
chr7 (170-235)||(15348059-15348124)
chr7 (170-226)||(15107132-15107188)
chr7 (171-219)||(25987063-25987111)
chr7 (172-219)||(497253-497300)
chr7 (172-219)||(930833-930880)
chr7 (170-205)||(3319181-3319216)
chr7 (172-219)||(7974514-7974561)
chr7 (172-219)||(10319033-10319080)
chr7 (172-219)||(17757904-17757951)
chr7 (172-219)||(18073956-18074003)
chr7 (172-219)||(18295977-18296024)
chr7 (172-219)||(21917228-21917275)
chr7 (172-219)||(23740406-23740453)
chr7 (172-219)||(24236239-24236286)
chr7 (172-219)||(26612467-26612514)
chr7 (172-219)||(30757366-30757413)
chr7 (172-219)||(32555429-32555476)
chr7 (172-219)||(34288173-34288220)
chr7 (172-219)||(34533354-34533401)
chr7 (172-219)||(35711798-35711845)
chr7 (172-219)||(36376185-36376232)
chr7 (172-219)||(39976854-39976901)
chr7 (170-221)||(40872306-40872357)
chr7 (172-219)||(42997193-42997240)
chr7 (172-207)||(45231661-45231696)
chr7 (172-219)||(47731827-47731874)
chr7 (172-205)||(4061130-4061163)
chr7 (174-219)||(7195581-7195626)
chr7 (170-222)||(21505758-21505810)
chr7 (170-230)||(29834291-29834351)
chr7 (172-204)||(30699163-30699195)
chr7 (172-204)||(34404583-34404615)
chr7 (85-145)||(36903459-36903518)
[»] scaffold0015 (1 HSPs)
scaffold0015 (170-235)||(76970-77035)
[»] chr1 (67 HSPs)
chr1 (173-230)||(16874646-16874703)
chr1 (170-235)||(20224671-20224736)
chr1 (171-235)||(39642349-39642413)
chr1 (171-226)||(46912332-46912387)
chr1 (170-229)||(50226531-50226590)
chr1 (181-235)||(6569658-6569712)
chr1 (170-224)||(16298197-16298251)
chr1 (170-224)||(25486333-25486387)
chr1 (176-230)||(41997787-41997841)
chr1 (174-224)||(45739055-45739105)
chr1 (170-235)||(25085533-25085598)
chr1 (170-235)||(30849370-30849435)
chr1 (174-226)||(14190686-14190738)
chr1 (171-235)||(23220675-23220739)
chr1 (170-230)||(48319517-48319577)
chr1 (170-229)||(5287367-5287426)
chr1 (172-219)||(40355973-40356020)
chr1 (170-224)||(7060779-7060833)
chr1 (171-229)||(12960986-12961044)
chr1 (170-224)||(17760804-17760858)
chr1 (170-224)||(44672432-44672486)
chr1 (178-223)||(16545681-16545726)
chr1 (170-219)||(23208445-23208494)
chr1 (85-146)||(39642267-39642328)
chr1 (170-235)||(44436865-44436930)
chr1 (85-146)||(46573013-46573074)
chr1 (171-223)||(7579785-7579837)
chr1 (171-211)||(18216820-18216860)
chr1 (170-230)||(46572938-46572998)
chr1 (172-219)||(2371301-2371348)
chr1 (180-235)||(3377610-3377665)
chr1 (172-219)||(4243255-4243302)
chr1 (172-219)||(9517387-9517434)
chr1 (172-219)||(11204632-11204679)
chr1 (170-229)||(14978911-14978970)
chr1 (172-219)||(20017507-20017554)
chr1 (172-219)||(28503260-28503307)
chr1 (172-219)||(29704757-29704804)
chr1 (172-219)||(31797206-31797253)
chr1 (172-219)||(32558353-32558400)
chr1 (172-219)||(33871019-33871066)
chr1 (172-219)||(34867622-34867669)
chr1 (172-219)||(37029053-37029100)
chr1 (172-219)||(41585410-41585457)
chr1 (172-219)||(42407008-42407055)
chr1 (86-145)||(45739123-45739182)
chr1 (172-219)||(45885090-45885137)
chr1 (170-225)||(46880882-46880937)
chr1 (172-219)||(47113513-47113560)
chr1 (171-205)||(7598746-7598780)
chr1 (172-205)||(12690159-12690192)
chr1 (85-126)||(14979007-14979048)
chr1 (172-205)||(21727751-21727784)
chr1 (170-235)||(23480055-23480119)
chr1 (46-75)||(25085396-25085425)
chr1 (170-235)||(32295093-32295158)
chr1 (172-205)||(39427550-39427583)
chr1 (172-205)||(46320814-46320847)
chr1 (86-127)||(46912257-46912298)
chr1 (170-219)||(52149642-52149691)
chr1 (172-233)||(52363320-52363381)
chr1 (86-146)||(6569594-6569654)
chr1 (175-219)||(30294995-30295039)
chr1 (48-76)||(32294981-32295009)
chr1 (172-204)||(49227257-49227289)
chr1 (170-226)||(49426133-49426189)
chr1 (174-230)||(50401484-50401540)
[»] scaffold0011 (2 HSPs)
scaffold0011 (170-235)||(145462-145527)
scaffold0011 (46-126)||(145561-145639)
[»] chr6 (46 HSPs)
chr6 (174-226)||(11351753-11351805)
chr6 (172-235)||(26311546-26311609)
chr6 (172-221)||(30965814-30965863)
chr6 (85-146)||(33401241-33401302)
chr6 (178-230)||(239093-239145)
chr6 (170-230)||(30349462-30349522)
chr6 (176-235)||(1377316-1377375)
chr6 (176-235)||(1385064-1385123)
chr6 (172-219)||(11322166-11322213)
chr6 (172-219)||(31740912-31740959)
chr6 (170-229)||(33399899-33399958)
chr6 (85-146)||(10727257-10727318)
chr6 (170-203)||(12766356-12766389)
chr6 (170-235)||(18031082-18031147)
chr6 (170-235)||(32143367-32143432)
chr6 (170-230)||(3812853-3812913)
chr6 (170-226)||(6036800-6036856)
chr6 (172-219)||(2565220-2565267)
chr6 (172-219)||(5606421-5606468)
chr6 (172-219)||(6261506-6261553)
chr6 (172-219)||(7324780-7324827)
chr6 (172-219)||(7391618-7391665)
chr6 (172-219)||(11615023-11615070)
chr6 (172-219)||(16765166-16765213)
chr6 (172-219)||(18683151-18683198)
chr6 (172-219)||(21008887-21008934)
chr6 (172-219)||(22279639-22279686)
chr6 (172-219)||(23291397-23291444)
chr6 (172-219)||(27223450-27223497)
chr6 (172-219)||(31951330-31951377)
chr6 (46-75)||(238927-238956)
chr6 (172-205)||(1815117-1815150)
chr6 (172-205)||(2100523-2100556)
chr6 (176-221)||(2203286-2203331)
chr6 (89-126)||(2203358-2203395)
chr6 (172-205)||(11277765-11277798)
chr6 (172-205)||(11446118-11446151)
chr6 (172-205)||(13042547-13042580)
chr6 (172-221)||(16735690-16735739)
chr6 (170-235)||(17248745-17248810)
chr6 (172-205)||(23883228-23883261)
chr6 (172-221)||(27771355-27771404)
chr6 (172-205)||(28930603-28930636)
chr6 (172-205)||(34705517-34705550)
chr6 (171-235)||(10727335-10727399)
chr6 (89-133)||(26601659-26601703)
[»] scaffold0578 (1 HSPs)
scaffold0578 (176-235)||(3184-3243)
[»] scaffold0951 (1 HSPs)
scaffold0951 (172-219)||(3830-3877)
[»] scaffold0417 (1 HSPs)
scaffold0417 (170-224)||(9457-9511)
[»] scaffold0194 (1 HSPs)
scaffold0194 (171-225)||(25041-25095)
[»] scaffold0809 (1 HSPs)
scaffold0809 (85-146)||(2819-2880)
[»] scaffold0328 (1 HSPs)
scaffold0328 (170-235)||(9520-9585)
[»] scaffold0248 (1 HSPs)
scaffold0248 (170-235)||(512-577)
[»] scaffold0062 (1 HSPs)
scaffold0062 (170-235)||(46215-46280)
[»] scaffold0372 (1 HSPs)
scaffold0372 (174-230)||(236-292)
[»] scaffold0864 (1 HSPs)
scaffold0864 (172-219)||(2769-2816)
[»] scaffold0352 (1 HSPs)
scaffold0352 (172-219)||(10078-10125)
[»] scaffold0166 (1 HSPs)
scaffold0166 (170-225)||(21775-21830)
[»] scaffold0078 (1 HSPs)
scaffold0078 (172-219)||(20767-20814)
[»] scaffold0041 (1 HSPs)
scaffold0041 (170-221)||(93925-93976)
[»] scaffold0022 (1 HSPs)
scaffold0022 (172-219)||(139316-139363)
[»] scaffold0001 (1 HSPs)
scaffold0001 (172-219)||(400830-400877)
[»] scaffold0777 (1 HSPs)
scaffold0777 (172-205)||(8-41)
[»] scaffold0283 (1 HSPs)
scaffold0283 (172-205)||(1323-1356)
[»] scaffold0137 (1 HSPs)
scaffold0137 (174-235)||(20022-20083)
[»] scaffold0014 (1 HSPs)
scaffold0014 (172-205)||(12799-12832)
[»] scaffold0025 (1 HSPs)
scaffold0025 (171-235)||(19170-19234)


Alignment Details
Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 5470478 - 5470542
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  5470478 aacacgtggcacctcacttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggc 5470542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 37431717 - 37431652
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  37431717 taacatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 37431652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 39918608 - 39918543
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||| ||||    
T  39918608 taacacgtggcacctcacttagggtgccacgtcagcgaagaccgagtcaaaattggccttgggggc 39918543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 43028967 - 43028910
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcc 227  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  43028967 taacacttggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcc 43028910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 4576683 - 4576739
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||    
T  4576683 taacacgtggcacctcacttagggtgccacgccagcgtagaccgagtcaaaattggc 4576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 5008429 - 5008493
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| |||||| ||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||    
T  5008429 aacatgtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggc 5008493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 14943686 - 14943750
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| |||||| ||||    
T  14943686 aacacgtggcacctcacttagggtgccacatcagcgtagaccgagtcaaaattagccttgggggc 14943750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 36195720 - 36195776
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcc 227  Q
    ||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  36195720 aacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcc 36195776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 8553684 - 8553734
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaa 220  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  8553684 taacacgtggcacctcacttagggtgtcacgtcagcatagaccgagtcaaa 8553734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 25333670 - 25333612
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||| |||||| ||||||||||||| |||||  |||||||||||||||||    
T  25333670 acacgtggcaccttacttagggtgccacgtcagcgtagaccaagtcaaaattggccttg 25333612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 5470394 - 5470454
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||||||| |||||||||||||| |||||||  |||||||| |||||||||    
T  5470394 ctacaaaactgccccctaagttttgcaattgtagcagttttg-gcccccaaggccaattttt 5470454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 19399317 - 19399370
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    |||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||    
T  19399317 taacacgtggaacctcacttagggtgccacgtcagcgtagaccgagtcaaaatt 19399370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 34679271 - 34679218
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    |||||||||||||||||||||| ||||||||||||| ||||| | |||||||||    
T  34679271 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgggtcaaaatt 34679218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 6592899 - 6592835
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||| |||| | |||||| ||||| ||||||||||| || ||||||||    
T  6592899 aacacgtggcacctcacttagggtgcaatgtcagcgtagactgagtcaaaattagcattgagggc 6592835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 14489387 - 14489327
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||| ||| ||||||| ||||| ||||| ||||||||||||| ||||    
T  14489387 taacacgtggcacctcacgtagggtgccacatcagcgtagaccgagtcaaaattggtcttg 14489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 24472587 - 24472643
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    |||||||||||||||||||||| ||||||||| ||  ||||| ||||||||||||||    
T  24472587 taacacgtggcacctcacttagggtgccacgttagtgtagacggagtcaaaattggc 24472643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 4925613 - 4925558
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||  |||||||||    
T  4925613 taacacgtggcaccttacttagggtgccacgtcagcgtagacagaaccaaaattgg 4925558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 15023011 - 15022952
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||| |||| |||||| |||||| ||||| |||||||| |||||||||    
T  15023011 aacacgtggcacctcaattagggtgccatgtcagcgtagactgagtcaaatttggccttg 15022952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 34123413 - 34123366
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  34123413 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 34123366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 35698993 - 35699040
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  35698993 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 35699040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 42445544 - 42445497
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  42445544 acacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaa 42445497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 27489683 - 27489625
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatt 143  Q
    |||||||||||| |||||| |||||||| ||||| |||||||| |||||||| ||||||    
T  27489683 ctacaaaactgctccctaagttttgcaactgtagcagttttgaccccccaaggccaatt 27489625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 37803296 - 37803242
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||| ||||| |||||| ||||||||||||| ||||| ||||||||||||    
T  37803296 taacacgtgacaccttacttagggtgccacgtcagcgtagaccgagtcaaaattg 37803242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 2609230 - 2609283
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| ||||||||||||    
T  2609230 aacacgtggcaactcacttagggtgccacatcagcgtagaccgagtcaaaattg 2609283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 2936928 - 2936977
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2936928 taacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2936977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 19895754 - 19895819
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||| ||||||||||||||| |||| ||||||||||| || || ||||||||||| ||| ||||    
T  19895754 taacacatggcacctcacttagggtgctacgtcagcataaaccgaatcaaaattggcattgggggc 19895819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 25411713 - 25411660
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||| |||||| |||||||  ||||||||||||||||||| |||||||||||||    
T  25411713 acacctggcacatcacttatggtgccacgtcagcatagaccgagtcaaaattgg 25411660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 31827699 - 31827646
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||| |||||||||||||||| ||||||||||||| ||||| || |||||||||    
T  31827699 aacatgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattg 31827646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 44617879 - 44617944
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| ||| ||||||| |||| ||||||||||||| ||||| ||||||||||||| |||| ||||    
T  44617879 taacaggtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggc 44617944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 5362315 - 5362371
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||| ||||||||||||||||  || ||||||||| ||||| ||||||||||||||    
T  5362315 taacatgtggcacctcacttaggatgtcacgtcagcgtagactgagtcaaaattggc 5362371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 6510173 - 6510113
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||||| ||||||||||| ||||||  || ||||||||| |||||    
T  6510173 taacatgtggcacctcacttagggtgccacgtcaacatagatcgattcaaaattgaccttg 6510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 18969234 - 18969294
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||| ||||||| |||||||| ||||||||| ||| |  |||||||||||||||||    
T  18969234 taacacgtgacacctcatttagagtgtcacgtcagcgtaggcctagtcaaaattggccttg 18969294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 27489606 - 27489546
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||| ||||||||||||  |||||||||||| || || |||||||||||| |||||    
T  27489606 taacacgtgtcacctcacttaggatgccacgtcagcgtaaaccgagtcaaaattgcccttg 27489546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 34761020 - 34760956
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| ||| |||||||||||| |||||||||||||||||||   ||||||||||| |||| ||||    
T  34761020 aacatgtgacacctcacttagggtgccacgtcagcatagaccacgtcaaaattggtcttgggggc 34760956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 11362702 - 11362749
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||| ||| ||| |||||||    
T  11362702 acacgtggcacctcacttagggtgccacgtcaacattgaccgagtcaa 11362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 19025958 - 19026005
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  19025958 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 19026005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 19256760 - 19256713
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  19256760 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 19256713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 21552682 - 21552729
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  21552682 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21552729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 21568097 - 21568050
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  21568097 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 24858017 - 24858064
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  24858017 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 24858064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 25888032 - 25888079
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  25888032 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 25888079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 31784392 - 31784439
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  31784392 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31784439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 34981556 - 34981509
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  34981556 acacgtggcacctcactcagggtgccacgtcagcattgactgagtcaa 34981509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 40493818 - 40493771
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  40493818 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 40493771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 18709399 - 18709449
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||  ||| ||||||||||||||| |||| |||||||    
T  18709399 acgtggcacctcacttaaggtgtcacgtcagcatagaccgagttaaaattg 18709449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 25092469 - 25092415
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||| | |||||||||||||  |||||||||||||| ||| ||||||||||||    
T  25092469 taacacatagcacctcacttaggatgccacgtcagcattgaccgagtcaaaattg 25092415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 41196370 - 41196424
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||| |||||||||||||||| ||||||||||||| |||||  |||| ||||||    
T  41196370 taacatgtggcacctcacttagggtgccacgtcagcgtagaccaagtctaaattg 41196424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 1374970 - 1374937
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  1374970 acacgtggcacctcacttagggtgccacgtcagc 1374937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 6592981 - 6592940
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttg 126  Q
    ||||||||||||||||||| |||||||| ||||| |||||||    
T  6592981 ctacaaaactgccccctaagttttgcaactgtagcagttttg 6592940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 14489527 - 14489498
Alignment:
Q  46 ttaggcttaatagcagttttcgccccctaa 75  Q
    ||||||||||||||||||||||||||||||    
T  14489527 ttaggcttaatagcagttttcgccccctaa 14489498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 24205437 - 24205470
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  24205437 acacgtggcacctcacttagggtgccacgtcagc 24205470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 39620691 - 39620736
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||| ||||||||||||| | ||| |||||||    
T  39620691 acgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39620736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 45395382 - 45395427
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||| ||||||||||||| | ||| |||||||    
T  45395382 acgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 45395427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 20436194 - 20436226
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcag 204  Q
    |||||||||||||||||||| ||||||||||||    
T  20436194 acacgtggcacctcacttagggtgccacgtcag 20436226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 32969843 - 32969815
Alignment:
Q  47 taggcttaatagcagttttcgccccctaa 75  Q
    |||||||||||||||||||||||||||||    
T  32969843 taggcttaatagcagttttcgccccctaa 32969815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 6807311 - 6807373
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgaggg 234  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  6807311 acacgtggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattgaccttgaggg 6807373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 16982751 - 16982816
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||| | ||||||||||||| |||||  ||||||||||||||||| ||||    
T  16982751 taacacgtggcacctcacttggggtgccacgtcagcgtagactaagtcaaaattggccttgggggc 16982816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 30539132 - 30539185
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  30539132 aacacgtggcacctcacttagggtgccacgtcagcatagaccgaatcaaaattg 30539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 23702275 - 23702335
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||||||||||| |||||    
T  23702275 taacacgtggcatctcacttagggtgccatgtcagcatagactgagtcaaaattgaccttg 23702335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 3676268 - 3676323
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  3676268 taacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgg 3676323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 29044687 - 29044752
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| |||||||||||| |||| || |||||||||| ||||| |||||||||||||||||| ||||    
T  29044687 taacgcgtggcacctcatttagggtaccacgtcagcgtagaccgagtcaaaattggccttgggggc 29044752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 45177375 - 45177310
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| ||| |||||||||||| ||||||||||||  ||||| ||||||||||| |||||||||||    
T  45177375 taacatgtgacacctcacttagggtgccacgtcagtgtagaccgagtcaaaattagccttgagggc 45177310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 22846616 - 22846552
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||| |||||| |||||| |||||  | ||||||||| ||||||||||    
T  22846616 aacacgtggcacctcacttagggtgccatgtcagcgtagaccaattcaaaattgcccttgagggc 22846552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 37263494 - 37263534
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcataga 210  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  37263494 taacacgtggcacctcacttagggtgccacgtcagcataga 37263534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 27339711 - 27339668
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  27339711 gtggcacctcacttagagtgccacgtcagcattgaccgagtcaa 27339668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 27545512 - 27545457
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||||||||||||||||||| ||||||||||||| ||||  |||| |||||||||    
T  27545512 aacacgtggcacctcacttagggtgccacgtcagcgtagatcgagttaaaattggc 27545457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 33298511 - 33298460
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    |||||||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  33298511 acacgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaatt 33298460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 35213169 - 35213228
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    |||||||||||||||||||||  ||||||||||||| ||| | |||||||||||| ||||    
T  35213169 taacacgtggcacctcacttaaggtgccacgtcagcgtaggccgagtcaaaattgacctt 35213228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 41487357 - 41487415
Alignment:
Q  177 tggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||| ||| ||||||||| ||||| ||||||||||||| |||| ||||    
T  41487357 tggcacctcacttagcgtgtcacgtcagcgtagaccgagtcaaaattggtcttgggggc 41487415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 6807129 - 6807195
Alignment:
Q  5 tacaatatatgatgaatggagtatatggtacattnnnnnnnttaggcttaatagcagttttcgcccc 71  Q
    |||||||||||||||||||||||||||| |||||       ||||||||||||| |||||| |||||    
T  6807129 tacaatatatgatgaatggagtatatggcacattaaaaaatttaggcttaatagtagtttttgcccc 6807195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 14880508 - 14880444
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||  ||||||||  |||||||||||||||||| |||||||||| ||||||| ||||    
T  14880508 taacacgtggcaa-tcacttaggatgccacgtcagcatagaccgagtcaaaatcggccttgggggc 14880444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 17071047 - 17071088
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagac 211  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  17071047 taacacgtggcacctcacttagggtgccacgtcagcgtagac 17071088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 17577225 - 17577184
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagac 211  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  17577225 taacacgtggcacctcacttagggtgccacgtcagcgtagac 17577184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 20057120 - 20057173
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||| |||||    
T  20057120 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattgg 20057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 23702204 - 23702253
Alignment:
Q  97 cccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||| |||||||| ||||||||||||| ||||||||| |||||||||    
T  23702204 cccctaagttttgcaactgtagtagttttggtcccccaaggccaattttt 23702253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 30539055 - 30539116
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||||||| |||| ||| ||||| |||||||  |||||||| |||||||||    
T  30539055 ctacaaaactgccccctaagttttacaactgtagcagttttggccccccaaggccaattttt 30539116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 37813247 - 37813296
Alignment:
Q  186 acttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  37813247 acttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 37813296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 995135 - 995182
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  995135 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 995182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 1985710 - 1985757
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  1985710 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 1985757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 2321688 - 2321641
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2321688 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 2321641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 4132922 - 4132879
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||    
T  4132922 gtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 4132879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 6641739 - 6641786
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  6641739 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6641786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 6745135 - 6745182
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  6745135 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6745182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 8834080 - 8834115
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcat 207  Q
    |||||||||||||||||||| |||||||||||||||    
T  8834080 acacgtggcacctcacttagggtgccacgtcagcat 8834115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 20095828 - 20095875
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  20095828 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20095875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 22192439 - 22192498
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||| |||||||||||| ||||||| | ||| ||||| |||||||||||| |||||    
T  22192439 aacacgtgacacctcacttagggtgccacataagcgtagaccgagtcaaaattgaccttg 22192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 23233921 - 23233968
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  23233921 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23233968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 28596102 - 28596055
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28596102 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28596055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 32318677 - 32318630
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  32318677 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 32318630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 32332282 - 32332329
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  32332282 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 32332329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 35735675 - 35735628
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||| ||||||| ||| |||||||    
T  35735675 acacgtggcacctcacttagggtgccacatcagcattgaccgagtcaa 35735628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 37953546 - 37953499
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  37953546 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 37953499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 38166656 - 38166609
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  38166656 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 39626109 - 39626156
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  39626109 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 39635659 - 39635706
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  39635659 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39635706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 41625632 - 41625585
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  41625632 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41625585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 41788823 - 41788776
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  41788823 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41788776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 9762374 - 9762320
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||| ||||||||||| |||  ||||||||||||| |||||||| |||||||||    
T  9762374 taacatgtggcacctcatttaatgtgccacgtcagcgtagacagaatcaaaattg 9762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 16531390 - 16531436
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtca 218  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  16531390 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtca 16531436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 4167344 - 4167389
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||| ||||||||||||| | ||| |||||||    
T  4167344 acgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 4167389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 6014559 - 6014592
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  6014559 acacgtggcacctcacttagggtgccacgtcagc 6014592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 29657877 - 29657824
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||||||||||||| ||| ||||||||  ||||| || |||||||||    
T  29657877 aacacgtggcacctcacttagggtgtcacgtcagtgtagaccgaatcaaaattg 29657824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 35213095 - 35213156
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||| ||| |||||||| ||||  |||||||  ||||||| ||||||||||    
T  35213095 ctacaaaactgccccttaagttttgcaactgtaacagttttggccccccaataccaattttt 35213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 36788403 - 36788448
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||| ||||||||||||| | ||| |||||||    
T  36788403 acgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 36788448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 42524849 - 42524882
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  42524849 acacgtggcacctcacttagggtgccacgtcagc 42524882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 44886045 - 44886078
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  44886045 acacgtggcacctcacttagggtgccacgtcagc 44886078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 45209148 - 45209115
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  45209148 acacgtggcacctcacttagggtgccacgtcagc 45209115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 25144116 - 25144060
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||| ||||||| |||||||| |||| |||||||| || || ||||||||||||||    
T  25144116 taacatgtggcacatcacttagggtgcaacgtcagcgtaaaccgagtcaaaattggc 25144060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 25897141 - 25897078
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| | |||||||||  |||||||||||| ||||| ||||||||||||| |||| ||||    
T  25897141 aacacgtggtaactcacttaggatgccacgtcagcgtagac-gagtcaaaattggtcttgggggc 25897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 41487457 - 41487398
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    ||||||||| ||||||||| |||||||| |||||  ||||||  |||||||||||||||||    
T  41487457 ctacaaaaccgccccctaagttttgcaactgtagctgttttgg-cccccaagaccaatttt 41487398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 45177454 - 45177414
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttg 126  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  45177454 tacaaaactgccccataagttttgcaactgtagtagttttg 45177414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 12406180 - 12406245
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  12406180 taacacgtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggc 12406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 31080650 - 31080585
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||||    
T  31080650 taacacgtggcacctcacttagggtgccacgtcagcatagaccgagttaaaattggccttgggggc 31080585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27904623 - 27904683
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||    
T  27904623 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttg 27904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 30604235 - 30604285
Alignment:
Q  178 ggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcct 228  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  30604235 ggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattggcct 30604285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 3333841 - 3333906
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||| ||||    
T  3333841 taacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggc 3333906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 26702609 - 26702544
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| |||||||||||| |||||| || |||||||||| |||| ||||    
T  26702609 taacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggc 26702544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 26972342 - 26972277
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| |||||||||||| |||||| || |||||||||| |||| ||||    
T  26972342 taacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggc 26972277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 9852960 - 9852900
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| ||||||||||||| ||||   |||||||||||||||||    
T  9852960 taacacgtggcacctcacttagggtgccacgtcagcgtagatcaagtcaaaattggccttg 9852900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 32391859 - 32391919
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||    
T  32391859 taacatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttg 32391919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 2974801 - 2974742
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||| ||||    
T  2974801 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggc 2974742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 20629884 - 20629939
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||    
T  20629884 taacacgtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattgg 20629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 43098167 - 43098221
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  43098167 taacacgcggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattg 43098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 3999238 - 3999303
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||||||||  ||||||||||||| |||||  ||||||||||||||||| ||||    
T  3999238 taacatgtggcacctcacttaaggtgccacgtcagcgtagaccaagtcaaaattggccttgggggc 3999303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 24405659 - 24405606
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcc 227  Q
    |||||||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  24405659 acgtggcacctcacttagggagccacgttagcatagaccgagtcaaaattggcc 24405606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 25910897 - 25910832
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| |||||||||||| ||||| ||||    
T  25910897 taacatgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggc 25910832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 6130398 - 6130458
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||||| ||| ||||||| ||||||| |||||||||||| |||||    
T  6130398 taacatgtggcacctcacttagggtgtcacgtcaacatagaccgagtcaaaattgaccttg 6130458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 16132918 - 16132858
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||| |||||||||||||||  |||||| ||||| |||||| |||||||||||||||||    
T  16132918 taacacatggcacctcacttaggatgccacatcagcgtagacaaagtcaaaattggccttg 16132858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 20512370 - 20512310
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| |||||| || ||| ||||| ||||||||||||| ||||    
T  20512370 taacacgtggcacctcacttagggtgccatgttagcgtagaccgagtcaaaattggtcttg 20512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 22300774 - 22300714
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||||| ||||||||||| | ||||| ||||||||||||| ||||    
T  22300774 taacatgtggcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggtcttg 22300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 20512264 - 20512322
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    |||||||||||||||||| |||||||  ||| |||||||||| |||||||||||||||||    
T  20512264 tacaaaactgccccctaagttttgcacctgtggtagttttga-cccccaagaccaatttt 20512322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 25566744 - 25566791
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  25566744 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 25566791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34082243 - 34082290
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||||||| | ||| |||||||    
T  34082243 acacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaa 34082290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 36798344 - 36798294
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaa 220  Q
    ||||| |||||||||||||||||||||||||||||  ||||| ||||||||    
T  36798344 taacatgtggcacctcacttagagtgccacgtcagtgtagaccgagtcaaa 36798294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 8340101 - 8340154
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||| |||||    
T  8340101 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattgg 8340154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 18403157 - 18403100
Alignment:
Q  173 cacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||| |||||||||||| ||||||||||| | ||||| ||||||||||||| ||||    
T  18403157 cacgtgacacctcacttagggtgccacgtcaacgtagactgagtcaaaattggtcttg 18403100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 21066513 - 21066460
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||  |||||||    
T  21066513 taacacgtggcacctcacttagggtgccacatcagcgtagacagatgcaaaatt 21066460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 26563162 - 26563097
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||| ||| |||||||||||||  | || |||||||||||| ||||| ||||    
T  26563162 taacacgtggcacctcacgtagggtgccacgtcagcggaaaccgagtcaaaattgaccttgggggc 26563097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 28736612 - 28736559
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||| |||||    
T  28736612 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattgg 28736559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 19340904 - 19340960
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||||||||||||||| |||| ||||||||||| | | ||| ||||||||||||||    
T  19340904 taacacgtggcacctcatttagggtgccacgtcaacgttgaccgagtcaaaattggc 19340960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 27904730 - 27904671
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    ||||||||| ||||||||| ||||||| |||| | ||||||| ||||||||||||||||||    
T  27904730 ctacaaaaccgccccctaagttttgcacttgtggcagttttg-tcccccaagaccaatttt 27904671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 30603642 - 30603730
Alignment:
Q  48 aggcttaatagcagttttcgccccctaagnnnnnnnnctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaag 136  Q
    |||||||||| ||||||||||||| ||||         |||||||||||||||||| |||||||| ||||| |||||||  ||||||||    
T  30603642 aggcttaataacagttttcgccccttaagaaaaaaaattacaaaactgccccctaagttttgcaactgtagcagttttggccccccaag 30603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 37897785 - 37897845
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||||| ||||||||| ||||||||||||||  ||||||  |||| |||||||||||||    
T  37897785 tacaaaaccgccccctaagttttgcaattgtagctgttttggcccccgaagaccaattttt 37897845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 3020735 - 3020782
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  3020735 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 3020782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 4125585 - 4125632
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  4125585 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 4125632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 7623661 - 7623708
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7623661 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7623708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 8755185 - 8755138
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  8755185 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8755138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 11480176 - 11480223
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  11480176 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 11480223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 16666745 - 16666698
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  16666745 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 16666698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 22925810 - 22925763
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  22925810 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 22925763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 24779447 - 24779392
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    ||||||||| || ||||||| | ||||||||||||| ||||| |||||||||||||    
T  24779447 taacacgtgacaactcacttggggtgccacgtcagcgtagaccgagtcaaaattgg 24779392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 28388122 - 28388169
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28388122 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 28620211 - 28620164
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28620211 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28620164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 33825772 - 33825725
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  33825772 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33825725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34168929 - 34168976
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  34168929 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34606511 - 34606558
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  34606511 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34606558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 35055949 - 35055902
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  35055949 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 35055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 37897859 - 37897918
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||| ||||| |||||||||  |||| |||||||||||||| ||||||||||||| ||||    
T  37897859 aacatgtggcgcctcacttaaggtgctacgtcagcatagaccgagtcaaaattggtcttg 37897918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 40276170 - 40276229
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||| |||||||||||||||| ||| ||||||||| ||||| | ||||||||| ||||||    
T  40276170 aacatgtggcacctcacttagggtgtcacgtcagcgtagaccgggtcaaaattagccttg 40276229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 40768060 - 40768013
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  40768060 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 40768013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 42739728 - 42739775
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  42739728 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42739775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 35166469 - 35166415
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||| |||||||||||||||| ||| || |||||| ||||| ||||||||||||    
T  35166469 taacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 35166415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 22052611 - 22052578
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  22052611 acacgtggcacctcacttagggtgccacgtcagc 22052578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 26323516 - 26323549
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  26323516 acacgtggcacctcacttagggtgccacgtcagc 26323549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 33204080 - 33204113
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  33204080 acacgtggcacctcacttagggtgccacgtcagc 33204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 19131663 - 19131699
Alignment:
Q  193 gtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  19131663 gtgccacgtcagcgtagaccgagtcaaaattggcctt 19131699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 24134536 - 24134492
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaa 220  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  24134536 gtggcacctcacttaaagtaccatgtcagcatagaccgagtcaaa 24134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 25363893 - 25363933
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttg 126  Q
    |||||||||| ||||||| |||||||||||| |||||||||    
T  25363893 tacaaaactgtcccctaagttttgcaattgtggtagttttg 25363933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 43074728 - 43074793
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  43074728 taacacgtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggc 43074793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 2837073 - 2837008
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||| ||||    
T  2837073 taacacgtggcacctcacttagggtgccacgtcagtgtagactgagtcaaaattggccttgggggc 2837008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 20112290 - 20112355
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||| ||||    
T  20112290 taacacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaaaattggctttgggggc 20112355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 1420684 - 1420744
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||    
T  1420684 taacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaattggccttg 1420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 53312460 - 53312396
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||||    
T  53312460 aacacgtggcacctcacttagggtgccacgtcagcgtagactgagtccaaattggccttgggggc 53312396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 23759715 - 23759774
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  23759715 aacacgtggcacctcacttagggtgccacgtcagcttagatcgagtcaaaattggccttg 23759774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 14449424 - 14449489
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||  ||||||||||||| || || |||||||||||||||||| ||||    
T  14449424 taacacgtggcacctcacttatggtgccacgtcagcgtaaaccgagtcaaaattggccttgggggc 14449489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 34771412 - 34771477
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||| ||| | ||||| ||||||||||||||||| |||||    
T  34771412 taacacgtggcacctcacttagggtgccacatcaacgtagacggagtcaaaattggccttaagggc 34771477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 2016963 - 2016900
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  2016963 aacacgtgg-acctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 2016900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 10059846 - 10059902
Alignment:
Q  179 gcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  10059846 gcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttgagggc 10059902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 29697695 - 29697635
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| | ||||||||||||||||    
T  29697695 taacacgtgacacctcacttagggtgccacgtcagcgtagactgggtcaaaattggccttg 29697635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 54855477 - 54855421
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  54855477 taacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggc 54855421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 26089643 - 26089584
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    ||||||||||||| |||||||| ||||||||||||| ||| | |||||||||||||||||    
T  26089643 taacacgtggcacttcacttagggtgccacgtcagcgtagtctgagtcaaaattggcctt 26089584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 4796180 - 4796234
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  4796180 taacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattg 4796234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 11824354 - 11824301
Alignment:
Q  177 tggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||    
T  11824354 tggcacctcacttagggtgccacatcagcgtagactgagtcaaaattggccttg 11824301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 21597542 - 21597595
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||    
T  21597542 taacacgtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaatt 21597595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 25909661 - 25909596
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||| || |||||  ||||||||||||| ||||| |||||||||||||||||| ||||    
T  25909661 taacacgtggcatcttacttaaggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 25909596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 31553382 - 31553447
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||| ||||||||||||| ||||| ||| ||| ||||| |||||||||||||||||| ||||    
T  31553382 taacacgtagcacctcacttagggtgccgcgttagcgtagaccgagtcaaaattggccttgggggc 31553447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 49185743 - 49185678
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||| ||||| ||||||||||||| |||||  ||||||||||||||||| ||||    
T  49185743 taacatgtggcacctcgcttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggc 49185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 18937380 - 18937440
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||| ||||||||||| ||| ||||||||||||||| |||| |||||||| ||||    
T  18937380 taacacgtggtacctcacttagggtggcacgtcagcatagaccgagtaaaaattggtcttg 18937440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 27978865 - 27978805
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||| |||| | | ||||||||||||| ||||| ||||||||||||||||||    
T  27978865 taacacgtggcacttcacgtggggtgccacgtcagcgtagaccgagtcaaaattggccttg 27978805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 20472721 - 20472674
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  20472721 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 20472674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 6637203 - 6637268
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||||||||| |||||| |||||  ||||| |||||||||||||| ||| ||||    
T  6637203 taacatgtggcacctcacttagggtgccatgtcagtgtagaccgagtcaaaattggcattgtgggc 6637268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 35383899 - 35383964
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| ||||||||||||||||  ||||||||||| | ||||| || ||||||||||||||| ||||    
T  35383899 taacgcgtggcacctcacttacggtgccacgtcaacgtagaccgaatcaaaattggccttgggggc 35383964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 35393474 - 35393409
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||||||||| ||||||| ||||||||||   |||||||||||| |||| ||||    
T  35393474 taacatgtggcacctcacttagggtgccacatcagcatagaacaagtcaaaattgggcttgggggc 35393409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 47999697 - 47999644
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    |||||||||||||||  ||||||||||||| ||||| || ||||||||||||||    
T  47999697 gtggcacctcacttaaggtgccacgtcagcgtagaccgaatcaaaattggcctt 47999644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 51233651 - 51233598
Alignment:
Q  173 cacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||    
T  51233651 cacgtggcacctcacttagggtgccacgtcagcgtagaccaagtccaaattggc 51233598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 51362713 - 51362648
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||| | ||||||||||| ||||||||||||  ||||| ||||||||||||| |||| ||||    
T  51362713 taacacgttgaacctcacttagggtgccacgtcagtgtagactgagtcaaaattggtcttgggggc 51362648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 51371636 - 51371583
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||| |||| ||||||||||||  ||||| ||||||||||||    
T  51371636 aacacgtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattg 51371583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 2654109 - 2654169
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| ||||| ||| |||||| ||||||||||||| |||||  |||||||||||||||||    
T  2654109 taacatgtggctcctgacttagggtgccacgtcagcgtagaccaagtcaaaattggccttg 2654169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 12719585 - 12719645
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||| | ||||||| ||||| ||||| ||||||||||||| ||||    
T  12719585 taacatgtggcacctcacttggggtgccacatcagcgtagaccgagtcaaaattggtcttg 12719645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 21451627 - 21451571
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||| ||| ||||||||  ||||| ||||||||||| ||||||    
T  21451627 acgtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgccttg 21451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 42526103 - 42526155
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaat 222  Q
    |||||||||||||||||||||| ||| ||||||||  ||||| ||||||||||    
T  42526103 taacacgtggcacctcacttagggtgtcacgtcagtgtagactgagtcaaaat 42526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 104372 - 104325
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  104372 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 104325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 232833 - 232880
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  232833 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 232880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 6386903 - 6386856
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  6386903 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6386856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 6614984 - 6615039
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    ||||| |||||||||||||||| ||| || |||||| ||||| |||||||||||||    
T  6614984 taacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgg 6615039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 7119766 - 7119719
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7119766 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7119719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 7666339 - 7666386
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7666339 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 8891826 - 8891779
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  8891826 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8891779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 17554217 - 17554170
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  17554217 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 17554170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 23315524 - 23315567
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||| | ||| |||||||    
T  23315524 gtggcacctcacttagagtgccacgtcagcgttgaccgagtcaa 23315567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 28982085 - 28982038
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28982085 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 29432188 - 29432235
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  29432188 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 29432235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34158614 - 34158661
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  34158614 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34158661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 37289627 - 37289580
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  37289627 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 37289580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 37973685 - 37973638
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  37973685 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 37973638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 39946219 - 39946266
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  39946219 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39946266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 40351008 - 40350961
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  40351008 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 40350961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 41205637 - 41205684
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  41205637 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41205684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 45289641 - 45289688
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  45289641 acacgtggcacctcacttagtgtgccacgtcagcgttgaccgagtcaa 45289688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 50513217 - 50513170
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  50513217 acacgtggcacctcacttagtgtgccacgtcagcgttgaccgagtcaa 50513170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 50769537 - 50769478
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    ||||||||||||||||||| || |||| |||||||| ||| | |||||||||||| ||||    
T  50769537 taacacgtggcacctcactcagggtgctacgtcagcgtaggccgagtcaaaattgacctt 50769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 52114307 - 52114260
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  52114307 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 52114260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 52310943 - 52310990
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  52310943 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 52310990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 8070799 - 8070745
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||||| | ||||||||||||| |||||  ||| |||||||    
T  8070799 taacacgtggcacctcacttggggtgccacgtcagcgtagaccaagttaaaattg 8070745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 6207243 - 6207304
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||| ||| |||| ||| ||||| |||||||   |||||||||||||||||    
T  6207243 ctacaaaactgccccataagttttacaactgtagcagttttggctccccaagaccaattttt 6207304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 16292442 - 16292389
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    ||||||||| |||||||||||| | ||||||||||  ||||| |||||||||||    
T  16292442 taacacgtgacacctcacttagggggccacgtcagtgtagaccgagtcaaaatt 16292389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 23759627 - 23759687
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||| | ||||||| |||||||| |||||||||||||  |||||||| |||||||||    
T  23759627 ctacaaaaccgtcccctaaattttgcaactgtagtagttttg-gcccccaaggccaattttt 23759687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 29697757 - 29697708
Alignment:
Q  97 cccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||| |||||||| ||||||||||||| ||||| ||| |||||||||    
T  29697757 cccctaagttttgcaactgtagtagttttggtcccctaaggccaattttt 29697708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 39136438 - 39136471
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  39136438 acacgtggcacctcacttagggtgccacgtcagc 39136471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 44356538 - 44356603
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| |||||||||||| ||||||||| | | |||||  |||||||||||| |||| ||||    
T  44356538 taacacgtgacacctcacttagggtgccacgttatcgtagaccaagtcaaaattggtcttgggggc 44356603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 2654216 - 2654157
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    ||||||||||||||||||| |||||||  ||| | |||||||| |||||||| ||||||||    
T  2654216 ctacaaaactgccccctaagttttgcatatgtggcagttttga-cccccaaggccaatttt 2654157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 35835918 - 35835966
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaa 220  Q
    |||||||||||||||||||  ||||||||||||| | ||| ||||||||    
T  35835918 acacgtggcacctcacttaaggtgccacgtcagcgttgaccgagtcaaa 35835966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 53924891 - 53924955
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgaggg 234  Q
    ||||||||| || ||||||||| ||| ||| ||| | ||||| |||||||||||| |||||||||    
T  53924891 taacacgtgacatctcacttagggtgtcacatcaacgtagaccgagtcaaaattgaccttgaggg 53924955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 578553 - 578618
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  578553 taacacgtggcacctcgcttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggc 578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 44436538 - 44436603
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  44436538 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 44436603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 51315625 - 51315689
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  51315625 aacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 51315689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 33329757 - 33329822
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||| ||||    
T  33329757 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggc 33329822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 44585818 - 44585915
Alignment:
Q  49 ggcttaatagcagttttcgccccctaagnnnnnnnnctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||||||||||||||||        ||||||||| ||||||||| |||||||| ||||| ||||||   ||||||||||||||||||    
T  44585818 ggcttaatagcagttttcgccccctaaggaaaaaaactacaaaaccgccccctaaattttgcaactgtagcagttttcgccccccaagaccaattttt 44585915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 48348400 - 48348459
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||    
T  48348400 aacacgtggcacctcacttagcgtgccacgtcagcgtagaccgagtcaaaattgggcttg 48348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 1814697 - 1814751
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  1814697 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattg 1814751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 44585926 - 44585983
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcc 227  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  44585926 taacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcc 44585983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 25843539 - 25843479
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||| ||||| ||||||||||||| ||||| | ||||||||||||||||    
T  25843539 taacacgtggcacctcgcttagggtgccacgtcagcgtagactgggtcaaaattggccttg 25843479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 28712628 - 28712568
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| ||||||||||||  ||||| |||||||| |||||||||    
T  28712628 taacacgtggcacctcacttagggtgccacgtcagtgtagaccgagtcaaagttggccttg 28712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 44624797 - 44624737
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||| || |||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  44624797 taacacatgtcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttg 44624737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 54719138 - 54719202
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||| ||||    
T  54719138 aacacttggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggc 54719202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 36567016 - 36567079
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||||| ||||||| ||||    
T  36567016 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaatcggccttgggggc 36567079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 36687731 - 36687785
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||||||| ||||||||||||| || || ||||||||||||    
T  36687731 taacacgtggcacctcacttagggtgccacgtcagcgtaaaccgagtcaaaattg 36687785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 43747420 - 43747474
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||||||||||||||  |||||||||||| ||||| ||||||||||||    
T  43747420 taacacgtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattg 43747474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 19404534 - 19404599
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||| ||||| ||| |||||  ||||||||||||||||| ||||    
T  19404534 taacacgtggcacctcacttagggtgtcacgttagcgtagactaagtcaaaattggccttgggggc 19404599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 20432324 - 20432384
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| |||| |||||||| |||||  ||||||||||| |||||    
T  20432324 taacacgtggcacctcacttagggtgctacgtcagcgtagaccaagtcaaaattgtccttg 20432384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 36677651 - 36677711
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||  ||||||||||||| || || |||||||||||| |||||    
T  36677651 taacacgtggcacctcacttaaggtgccacgtcagcgtaaaccgagtcaaaattgaccttg 36677711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 38177349 - 38177285
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| |||||||||||||||| |||||||||||||  | || |||||||||||||||||| ||||    
T  38177349 aacatgtggcacctcacttagggtgccacgtcagcgcaaaccgagtcaaaattggccttgggggc 38177285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 44127522 - 44127462
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||||| ||||||  |||||||||||| ||||| || |||||||||||||||    
T  44127522 taacacgtggcaccttacttaggatgccacgtcagcttagaccgaatcaaaattggccttg 44127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 46226871 - 46226815
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    |||||||||||||||||||||| ||||||||||||| || || |||| |||||||||    
T  46226871 taacacgtggcacctcacttagggtgccacgtcagcgtataccgagttaaaattggc 46226815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 1938490 - 1938436
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||| |||||||||||| |||||| |||||| ||||| ||||||||||||    
T  1938490 taacacgtgacacctcacttagggtgccatgtcagcgtagaccgagtcaaaattg 1938436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 3916603 - 3916549
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||||||| ||||||||| ||  ||||| ||||||||||||    
T  3916603 taacacgtggcacctcacttagggtgccacgttagtgtagaccgagtcaaaattg 3916549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 86747 - 86682
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| || ||| |||||| ||||  ||||||||||||| |||| ||||    
T  86747 taacacgtggcacctcacttagggtcccatgtcagcgtagatcgagtcaaaattggtcttgggggc 86682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 4474316 - 4474255
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttttt 147  Q
    |||||||| |||| |||| |||||||| ||||| |||||||  |||||||||||||||||||    
T  4474316 tacaaaaccgccctctaagttttgcaactgtagcagttttggccccccaagaccaatttttt 4474255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 7218291 - 7218356
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||  ||| ||||||||||||||   ||||||||||| ||||| ||||    
T  7218291 taacacgtggcacctcacttaaggtgtcacgtcagcatagatcaagtcaaaattgaccttgggggc 7218356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 38511796 - 38511845
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  38511796 taacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38511845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 52008418 - 52008365
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    ||||||||| |||||||||||| ||| ||||||||| ||||| |||||||||||    
T  52008418 taacacgtgacacctcacttagggtgtcacgtcagcgtagaccgagtcaaaatt 52008365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 3192947 - 3192883
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgaggg 234  Q
    ||||| |||||||||||||||| |||||| || ||  ||||| |||||||||||| |||||||||    
T  3192947 taacatgtggcacctcacttagggtgccatgttagtgtagaccgagtcaaaattgaccttgaggg 3192883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 257577 - 257624
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  257577 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 787271 - 787224
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  787271 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 3212293 - 3212340
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  3212293 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 3212340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 5577105 - 5577058
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  5577105 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 5577058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 12759648 - 12759707
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||  |||||||||||| ||||    
T  12759648 taacatgtggcacctcacttagggtgtcacgtcagcctagatcgagtcaaaattgacctt 12759707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 19391776 - 19391823
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  19391776 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 19391823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 27748416 - 27748369
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  27748416 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 27748369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 27857276 - 27857323
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  27857276 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 27857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 28097565 - 28097612
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28097565 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28097612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 28964295 - 28964342
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28964295 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28964342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 29168896 - 29168853
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||| | ||| |||||||    
T  29168896 gtggcacctcacttagagtgccacgtcagcgttgaccgagtcaa 29168853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 30200555 - 30200602
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  30200555 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 30200602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 30761003 - 30760956
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  30761003 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 30760956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 31577591 - 31577544
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  31577591 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31577544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 32458924 - 32458971
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  32458924 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 32458971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 32508060 - 32508107
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  32508060 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 32508107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 33252626 - 33252673
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  33252626 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33252673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 33576550 - 33576597
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  33576550 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33576597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 33933539 - 33933492
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  33933539 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33933492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 41223684 - 41223637
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  41223684 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41223637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 41281988 - 41282035
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  41281988 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41282035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 47530511 - 47530464
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  47530511 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47530464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 50033382 - 50033429
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  50033382 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 50033429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 51842973 - 51842926
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  51842973 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 51842926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 53191133 - 53191086
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  53191133 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 53191086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 53531947 - 53531994
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  53531947 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 53531994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 14992777 - 14992831
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||  |||||| |||||| ||||| |||||||||||| |||||    
T  14992777 gtggcacctcacttaaggtgccatgtcagcgtagactgagtcaaaattgaccttg 14992831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 25154348 - 25154298
Alignment:
Q  177 tggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcc 227  Q
    ||||||||||||||  ||||||||||||| ||||  |||||||||||||||    
T  25154348 tggcacctcacttaaggtgccacgtcagcgtagatcgagtcaaaattggcc 25154298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 43586642 - 43586692
Alignment:
Q  96 ccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||||| |||||||||||||   |||||| |||||||||||||||||||    
T  43586642 ccccctaagttttgcaattgtaacggttttggtcccccaagaccaattttt 43586692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 25902469 - 25902529
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||| ||| |||||||| ||||  |||||||  ||||||||||||||||||    
T  25902469 ctacaaaactgcccc-taaattttgcaactgtaacagttttggccccccaagaccaattttt 25902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 32204988 - 32205021
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  32204988 acacgtggcacctcacttagggtgccacgtcagc 32205021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 35359169 - 35359116
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||| || |||||||  ||||||||||||| ||||| ||||||||||||    
T  35359169 aacacgtgggacatcacttaaggtgccacgtcagcgtagaccgagtcaaaattg 35359116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 38958160 - 38958131
Alignment:
Q  46 ttaggcttaatagcagttttcgccccctaa 75  Q
    ||||||||||||||||||||||||||||||    
T  38958160 ttaggcttaatagcagttttcgccccctaa 38958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 43747365 - 43747406
Alignment:
Q  105 ttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||||||||||| |||||||  ||||||||||||||||||    
T  43747365 ttttgcaattgtagcagttttggccccccaagaccaattttt 43747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 44433205 - 44433269
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| ||||| |||||| ||||||| ||||| ||||| | |||||||||||||||| ||||    
T  44433205 taacacgtgacacctaacttag-gtgccacatcagcgtagaccgggtcaaaattggccttgggggc 44433269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 51214300 - 51214333
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  51214300 acacgtggcacctcacttagggtgccacgtcagc 51214333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 86644 - 86699
Alignment:
Q  89 aaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    |||||||| |||||| ||||||| |||||| |||||||  |||||||||||||||||    
T  86644 aaaactgcgccctaagttttgcacttgtagcagttttgg-cccccaagaccaatttt 86699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 14349424 - 14349396
Alignment:
Q  47 taggcttaatagcagttttcgccccctaa 75  Q
    |||||||||||||||||||||||||||||    
T  14349424 taggcttaatagcagttttcgccccctaa 14349396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 17483699 - 17483731
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcag 204  Q
    |||||||||||||||||||| ||||||||||||    
T  17483699 acacgtggcacctcacttagggtgccacgtcag 17483731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 27984274 - 27984306
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcag 204  Q
    |||||||||||||||||||| ||||||||||||    
T  27984274 acacgtggcacctcacttagggtgccacgtcag 27984306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 28204626 - 28204682
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||||||| ||||||| ||||  |||||||||||  ||||| ||||||||||||||    
T  28204626 taacacgtgacacctcaattaggatgccacgtcagtgtagaccgagtcaaaattggc 28204682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Complemental strand, 44624914 - 44624886
Alignment:
Q  48 aggcttaatagcagttttcgccccctaag 76  Q
    |||||||||||||||||||||||||||||    
T  44624914 aggcttaatagcagttttcgccccctaag 44624886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 54464336 - 54464276
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||| ||| |||||||||  ||||||||| ||| ||||| |||||||||||| |||||    
T  54464336 taacacgcggcgcctcacttaaggtgccacgtgagcgtagaccgagtcaaaattgaccttg 54464276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 4049882 - 4049819
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgaggg 234  Q
    ||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  4049882 aacacgtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggccttgaggg 4049819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 36903436 - 36903371
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||||||||| |||||| |||||| ||||| |||||||||||||||||||||||    
T  36903436 taacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattggccttgagggc 36903371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 8074047 - 8073983
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||| ||||    
T  8074047 aacacgtggcacctcacttagagtgccacgtcagcgaagaccgaatcaaaattggccttgggggc 8073983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 18504417 - 18504358
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    |||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  18504417 taacacgtggaacctcacttagggtgccacgtcagcgtagactgagtcaaaattggcctt 18504358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 18186591 - 18186651
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||| ||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||    
T  18186591 taacccgtggcacctcacttagggtgccacgtcaacgtagactgagtcaaaattggccttg 18186651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 28785895 - 28785955
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||| ||||||    
T  28785895 taacacgtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattagccttg 28785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 35250292 - 35250232
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||  ||||||||||||  ||||| ||||||||||||||||||    
T  35250292 taacacgtggcacctcacttaaggtgccacgtcagtgtagaccgagtcaaaattggccttg 35250232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 6726398 - 6726460
Alignment:
Q  173 cacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||| ||||||||||||| || || |||||||||||| ||||| ||||    
T  6726398 cacgtggcacctcacttagggtgccacgtcagcgtaaactgagtcaaaattgtccttgggggc 6726460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 35250364 - 35250306
Alignment:
Q  88 caaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||||||||||||| |||||||| ||||| |||||||  ||||||||||||||||||    
T  35250364 caaaactgccccctaagttttgcaactgtagcagttttggccccccaagaccaattttt 35250306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 44312883 - 44312944
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttga 231  Q
    ||||| |||||||||||||||| ||| || |||||||||||| ||||||||||||| |||||    
T  44312883 taacatgtggcacctcacttagggtgacatgtcagcatagaccgagtcaaaattggtcttga 44312944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 41243816 - 41243756
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||| || |||||||||||| ||||||||||| | ||||| ||||||||||||||||||    
T  41243816 taacacatgacacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttg 41243756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 21782744 - 21782791
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  21782744 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 21782791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 17931878 - 17931924
Alignment:
Q  178 ggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||    
T  17931878 ggcacctcacttagggtgccacgtcagcgtagacaaagtcaaaattg 17931924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 36580415 - 36580469
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||| ||||||| |||| ||||||||||||| ||||| ||||||||||||    
T  36580415 taacacgtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattg 36580469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 15348124 - 15348059
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||| ||||||||||| ||||||| ||||| ||||| |||||||||||| ||||| ||||    
T  15348124 taacatgtggaacctcacttagggtgccacatcagcgtagaccgagtcaaaattgaccttgggggc 15348059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 15107132 - 15107188
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||| |||||||||||||||| ||||||| ||||  ||||| ||||||||||||||    
T  15107132 taacatgtggcacctcacttagggtgccacatcagtgtagaccgagtcaaaattggc 15107188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 25987063 - 25987111
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    ||||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  25987063 aacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 25987111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 497253 - 497300
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  497253 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 497300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 930880 - 930833
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  930880 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 930833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 3319216 - 3319181
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||||| |||||||||||||    
T  3319216 taacacgtggcacctcacttagggtgccacgtcagc 3319181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 7974561 - 7974514
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7974561 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7974514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 10319033 - 10319080
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  10319033 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 10319080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 17757904 - 17757951
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  17757904 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 17757951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 18073956 - 18074003
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  18073956 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 18074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 18296024 - 18295977
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  18296024 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 18295977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 21917228 - 21917275
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  21917228 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 23740406 - 23740453
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  23740406 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23740453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 24236286 - 24236239
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  24236286 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 24236239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 26612514 - 26612467
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  26612514 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 26612467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 30757366 - 30757413
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  30757366 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 30757413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 32555476 - 32555429
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| |||| |||||||||| ||| |||||||    
T  32555476 acacgtggcacctcacttagggtgctacgtcagcattgaccgagtcaa 32555429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 34288220 - 34288173
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  34288220 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34288173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34533354 - 34533401
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  34533354 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 34533401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 35711798 - 35711845
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  35711798 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 35711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 36376232 - 36376185
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  36376232 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 36376185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 39976901 - 39976854
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  39976901 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39976854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 40872306 - 40872357
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaa 221  Q
    |||||||| | ||||||||||| ||||||||||||| ||||| |||||||||    
T  40872306 taacacgtagtacctcacttagggtgccacgtcagcgtagaccgagtcaaaa 40872357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 42997193 - 42997240
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  42997193 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42997240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 45231661 - 45231696
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcat 207  Q
    |||||||||||||||||||| |||||||||||||||    
T  45231661 acacgtggcacctcacttagggtgccacgtcagcat 45231696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 47731874 - 47731827
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  47731874 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47731827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 4061130 - 4061163
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  4061130 acacgtggcacctcacttagggtgccacgtcagc 4061163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 7195626 - 7195581
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7195626 acgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7195581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 21505758 - 21505810
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaat 222  Q
    ||||||||| |||||||||||| ||| ||||||| | ||||| ||||||||||    
T  21505758 taacacgtgacacctcacttagggtgtcacgtcaacgtagactgagtcaaaat 21505810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 29834291 - 29834351
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||||| ||| ||||||||| | ||| ||||| |||||| |||||    
T  29834291 taacatgtggcacctcacttagggtgtcacgtcagcgtggaccgagtctaaattgaccttg 29834351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 30699195 - 30699163
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcag 204  Q
    |||||||||||||||||||| ||||||||||||    
T  30699195 acacgtggcacctcacttagggtgccacgtcag 30699163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 34404615 - 34404583
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcag 204  Q
    |||||||||||||||||||| ||||||||||||    
T  34404615 acacgtggcacctcacttagggtgccacgtcag 34404583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 36903518 - 36903459
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    |||||||||||| |||||| |||||||| ||||| |||||| | |||||||| ||||||||    
T  36903518 ctacaaaactgcaccctaagttttgcaactgtagcagtttt-agcccccaaggccaatttt 36903459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 77035 - 76970
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  77035 taacacgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggc 76970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 16874646 - 16874703
Alignment:
Q  173 cacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  16874646 cacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttg 16874703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 20224671 - 20224736
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||| |||||| |||| ||||||||||||| |||||||||||||||||| | ||||||||    
T  20224671 taacacgtggtacctcatttagggtgccacgtcagcgtagacagagtcaaaattgtcattgagggc 20224736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 39642349 - 39642413
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||| ||||    
T  39642349 aacacgtggcacttcacttagggtgccgcgtcagcatagaccgagtcaaaattggctttgggggc 39642413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 46912332 - 46912387
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||||||||||||    
T  46912332 aacacgtggcacctcatttagggtgccacgtcagcgtaaacagagtcaaaattggc 46912387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 50226531 - 50226590
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||| |||||    
T  50226531 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaatattagcctt 50226590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 6569658 - 6569712
Alignment:
Q  181 acctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||||||| ||||| || |||||||||| |||||||||    
T  6569658 acctcacttagagtgccacgtcagcgtagaccgaatcaaaattggtcttgagggc 6569712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 16298197 - 16298251
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||||||||||| ||||||||| |||||  |||||||||||    
T  16298197 taacacgtggcacctcacttagagtgtcacgtcagcgtagaccaagtcaaaattg 16298251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 25486387 - 25486333
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||    
T  25486387 taacacgtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattg 25486333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 41997787 - 41997841
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||    
T  41997787 gtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggccttg 41997841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 45739105 - 45739055
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  45739105 acgtggcacctcacttagggtgccacgttagcatagaccgagtcaaaattg 45739055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 25085533 - 25085598
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| ||||||||||||  ||||| | ||||||||||  |||||||||    
T  25085533 taacacgtggcacctcacttagggtgccacgtcagtgtagaccgggtcaaaattgatcttgagggc 25085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 30849370 - 30849435
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| |||  ||||||||||||||  ||| ||||||||||||| ||||    
T  30849370 taacacgtggcacctcacttagggtgttacgtcagcatagaccaagttaaaattggccttgtgggc 30849435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 14190686 - 14190738
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||    
T  14190686 acgtggcaccttacttagagtgccacatcagcgtagaccgagtcaaaattggc 14190738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 23220739 - 23220675
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| |||||||||||||||| ||||||||||||| ||||| || |||||||||| |||| ||||    
T  23220739 aacatgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggtcttgggggc 23220675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 48319577 - 48319517
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||||||||||||  |||||||||||| | || ||||||||||||| |||||    
T  48319577 taacacgtggcacctcacttaggatgccacgtcagcgttgatagagtcaaaattgaccttg 48319517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 5287367 - 5287426
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    |||||| ||||||||||||||| ||||||||||||| | ||| |||||||||||| ||||    
T  5287367 taacacttggcacctcacttagggtgccacgtcagcgtggaccgagtcaaaattgacctt 5287426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 40356020 - 40355973
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||||||| | ||| |||||||    
T  40356020 acacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaa 40355973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 7060779 - 7060833
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||| |||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  7060779 taacacgcggcacctcacttagggtgccacgtcagtgtagaccgagtcaaaattg 7060833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 12960986 - 12961044
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    |||| |||||| ||||||||| ||| ||||||||| ||||| |||||||||||||||||    
T  12960986 aacatgtggcatctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggcctt 12961044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 17760858 - 17760804
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||||||||| |||| ||||||||||||  ||||| ||||||||||||    
T  17760858 taacacgtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattg 17760804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 44672486 - 44672432
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||||||| |||||||| ||||||||||||| ||||| || |||||||||    
T  44672486 taacacgtggcacttcacttagggtgccacgtcagcgtagaccgaatcaaaattg 44672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 16545726 - 16545681
Alignment:
Q  178 ggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||    
T  16545726 ggcacctcacttagggtgctacgtcagcatagaccgagtcaaaatt 16545681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 23208445 - 23208494
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||| |||||||||||| || ||| |||||||    
T  23208445 taacacgtggcacctcacttagggtgccacgtcagtattgaccgagtcaa 23208494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 39642267 - 39642328
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||| ||||||||| || ||||||||||| |||||||  |||||||| |||||||||    
T  39642267 ctacaaaaccgccccctaagttctgcaattgtagcagttttggccccccaaggccaattttt 39642328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 44436930 - 44436865
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| |||| |||| ||| ||||  |||||||||||| ||||| ||||    
T  44436930 taacacgtggcacctcacttagggtgcgacgtaagcgtagatcgagtcaaaattgaccttgggggc 44436865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 46573074 - 46573013
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||| |||||||||||| |||||||| ||||| ||||||| |||||| ||| ||||||||    
T  46573074 ctacaacactgccccctaagttttgcaactgtagcagttttggtcccccgagatcaattttt 46573013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 7579837 - 7579785
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaatt 223  Q
    |||| |||||||||||||||| |||||| |||||| ||||| |||||||||||    
T  7579837 aacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaatt 7579785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 18216820 - 18216860
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagac 211  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  18216820 aacacgtggcacctcacttagggtgccacgtcagcgtagac 18216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 46572998 - 46572938
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||||||| ||  ||| ||||| |||||  |||||||||||||||||    
T  46572998 taacacgtggcacctcacttagggtctcacatcagcgtagaccaagtcaaaattggccttg 46572938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 2371348 - 2371301
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2371348 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2371301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 3377665 - 3377610
Alignment:
Q  180 cacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||| | | ||||||||| ||||| |||||||||||||||||| ||||    
T  3377665 cacctcacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggggc 3377610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 4243302 - 4243255
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  4243302 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 4243255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 9517387 - 9517434
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  9517387 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 9517434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 11204679 - 11204632
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  11204679 acacgtggcacctcacttagtgtgccacgtcagcgttgaccgagtcaa 11204632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 14978970 - 14978911
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||  | ||||||||||||||    
T  14978970 taacatgtggcacctcacttagggtgccacatcagcgtagaccaattcaaaattggcctt 14978911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 20017554 - 20017507
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  20017554 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20017507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 28503307 - 28503260
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  28503307 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 29704757 - 29704804
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||| ||||||||||| | ||| |||||||    
T  29704757 acacgtggcacctcacttagagcgccacgtcagcgttgaccgagtcaa 29704804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 31797206 - 31797253
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  31797206 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31797253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 32558353 - 32558400
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||| ||||||||| | |||||||||||    
T  32558353 acacgtggcacctcacttagggtgtcacgtcagcgttgacagagtcaa 32558400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 33871066 - 33871019
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  33871066 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34867622 - 34867669
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  34867622 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34867669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 37029100 - 37029053
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  37029100 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 37029053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 41585457 - 41585410
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  41585457 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41585410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 42407055 - 42407008
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  42407055 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 45739182 - 45739123
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaatttt 145  Q
    |||||||||||||| ||| |||||||| ||||| |||||||  |||||||| ||||||||    
T  45739182 tacaaaactgccccataagttttgcaactgtagcagttttggccccccaaggccaatttt 45739123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 45885090 - 45885137
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  45885090 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 45885137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 46880882 - 46880937
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    |||||| |||||| |||||||| ||||||||||||| ||||| ||||| |||||||    
T  46880882 taacacatggcacatcacttagggtgccacgtcagcgtagaccgagtcgaaattgg 46880937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 47113560 - 47113513
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  47113560 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47113513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 7598746 - 7598780
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagc 205  Q
    ||||||||||||||||||||| |||||||||||||    
T  7598746 aacacgtggcacctcacttagggtgccacgtcagc 7598780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 12690192 - 12690159
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  12690192 acacgtggcacctcacttagggtgccacgtcagc 12690159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 14979048 - 14979007
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttg 126  Q
    ||||||||| ||||||||| |||||||| |||||||||||||    
T  14979048 ctacaaaaccgccccctaaattttgcaactgtagtagttttg 14979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 21727784 - 21727751
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  21727784 acacgtggcacctcacttagggtgccacgtcagc 21727751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 23480055 - 23480119
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| ||||||| || | ||||||| ||||| ||||| |||||||||||||||||| ||||    
T  23480055 taacacgtgacacctcatttgg-gtgccacatcagcgtagaccgagtcaaaattggccttgggggc 23480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 75
Target Start/End: Original strand, 25085396 - 25085425
Alignment:
Q  46 ttaggcttaatagcagttttcgccccctaa 75  Q
    ||||||||||||||||||||||||||||||    
T  25085396 ttaggcttaatagcagttttcgccccctaa 25085425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 32295093 - 32295158
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||| |||| |||||||||| |  ||||| |||| ||||||||| ||| ||||    
T  32295093 taacacgtggcacctcatttagggtgccacgtccgggtagaccgagttaaaattggctttgggggc 32295158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 39427583 - 39427550
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  39427583 acacgtggcacctcacttagggtgccacgtcagc 39427550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 46320847 - 46320814
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  46320847 acacgtggcacctcacttagggtgccacgtcagc 46320814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 46912257 - 46912298
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttga 127  Q
    |||||||||| ||||||| |||||||||||||| ||||||||    
T  46912257 tacaaaactgtcccctaagttttgcaattgtagaagttttga 46912298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 52149691 - 52149642
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||| |||||| |||||| | ||| |||||||    
T  52149691 taacacgtggcacctcacttagggtgccatgtcagcgttgaccgagtcaa 52149642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 52363320 - 52363381
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagg 233  Q
    |||| ||||||||||||||| ||||||||||||| | ||| ||||||| | ||| |||||||    
T  52363320 acacatggcacctcacttagggtgccacgtcagcgttgaccgagtcaacactggacttgagg 52363381  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 6569594 - 6569654
Alignment:
Q  86 tacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||||| |||||  || |||||||||||||| |||||||  ||||||| ||||||||||    
T  6569594 tacaaaaccgcccctaaaattttgcaattgtagcagttttggccccccaaaaccaattttt 6569654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 30295039 - 30294995
Alignment:
Q  175 cgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||||    
T  30295039 cgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 30294995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 32294981 - 32295009
Alignment:
Q  48 aggcttaatagcagttttcgccccctaag 76  Q
    |||||||||||||||||||||||||||||    
T  32294981 aggcttaatagcagttttcgccccctaag 32295009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 49227257 - 49227289
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcag 204  Q
    |||||||||||||||||||| ||||||||||||    
T  49227257 acacgtggcacctcacttagggtgccacgtcag 49227289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 49426133 - 49426189
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||||||| ||||| |||||| ||| ||||||||| |||||  |||||||||||||    
T  49426133 taacacgtgacaccttacttagggtgtcacgtcagcgtagaccaagtcaaaattggc 49426189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 50401540 - 50401484
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||||||||||| |||  ||| ||||||||  ||||| ||||||||||||||||||    
T  50401540 acgtggcacctcatttaaggtgtcacgtcagagtagaccgagtcaaaattggccttg 50401484  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 145527 - 145462
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||||||||| || ||| |||||| ||||| |||||||||||||||||| ||||    
T  145527 taacacgtggcacctcacttagggttccatgtcagcctagaccgagtcaaaattggccttgggggc 145462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 145639 - 145561
Alignment:
Q  46 ttaggcttaatagcagttttcgccccctaagnnnnnnnnctacaaaactgccccctaacttttgcaattgtagtagttttg 126  Q
    ||||||||||||| |||||| ||||||||||        |||||||||||| |||||| |||||||||||||| |||||||    
T  145639 ttaggcttaatagtagttttggccccctaagaaaaaa--ctacaaaactgctccctaagttttgcaattgtagcagttttg 145561  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 11351805 - 11351753
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  11351805 acgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggc 11351753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 26311546 - 26311609
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||||| ||||| ||||    
T  26311546 acacgtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccttgggggc 26311609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 30965863 - 30965814
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaa 221  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  30965863 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaaaa 30965814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 33401302 - 33401241
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||  ||||||||||||||||||    
T  33401302 ctacaaaactgtcccctaagttttgcaactgtagcagttttggccccccaagaccaattttt 33401241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 239093 - 239145
Alignment:
Q  178 ggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||| ||||||||||||| ||||| || |||||||||||||||    
T  239093 ggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggccttg 239145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 30349522 - 30349462
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    ||||| |||||||||||||||| ||||||||||| | ||||| |||||| |||||||||||    
T  30349522 taacatgtggcacctcacttagggtgccacgtcaacgtagaccgagtcataattggccttg 30349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 1377375 - 1377316
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||| |||| || ||||||||||| ||||||||||  |||||||||||    
T  1377375 gtggcacctcacttagggtgcgacatcagcatagaccgagtcaaaataagccttgagggc 1377316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 1385123 - 1385064
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||||||||||| |||| || ||||||||||| ||||||||||  |||||||||||    
T  1385123 gtggcacctcacttagggtgcgacatcagcatagaccgagtcaaaataagccttgagggc 1385064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 11322166 - 11322213
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||||||| | ||| |||||||    
T  11322166 acacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaa 11322213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 31740912 - 31740959
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||||||||||||||||| | ||| |||||||    
T  31740912 acacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaa 31740959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 33399958 - 33399899
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggcctt 229  Q
    ||||||||| ||| |||||||| ||||||||||||| ||||| |||||||||||| ||||    
T  33399958 taacacgtgacacatcacttagggtgccacgtcagcgtagaccgagtcaaaattgacctt 33399899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 10727257 - 10727318
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    |||||||||||||| |||| |||||||| ||||| |||||||  |||||||| |||||||||    
T  10727257 ctacaaaactgccctctaagttttgcaactgtagcagttttggccccccaaggccaattttt 10727318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 12766389 - 12766356
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtca 203  Q
    ||||||||||||||||||||||||||||||||||    
T  12766389 taacacgtggcacctcacttagagtgccacgtca 12766356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 18031082 - 18031147
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| ||| |||||||||||| ||||||||||||| |||||  |||||||||||  |||||||||    
T  18031082 taacaagtgacacctcacttagggtgccacgtcagcgtagaccaagtcaaaattgatcttgagggc 18031147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 32143432 - 32143367
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| ||| |||||||||||||||||||| ||| | ||||| ||||||||||||| |||| ||||    
T  32143432 taacatgtgccacctcacttagagtgccacatcaacgtagaccgagtcaaaattggtcttgggggc 32143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 3812913 - 3812853
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||| | ||||||||||||| ||||||||||||| ||||| | ||||||||||| ||||    
T  3812913 taacacatagcacctcacttagggtgccacgtcagcgtagaccgggtcaaaattggtcttg 3812853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 6036800 - 6036856
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggc 226  Q
    ||||| |||||||||||||||| ||| |||||||||||| ||  |||||||||||||    
T  6036800 taacatgtggcacctcacttagggtgtcacgtcagcataaaccaagtcaaaattggc 6036856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 2565220 - 2565267
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2565220 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 5606468 - 5606421
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  5606468 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 5606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 6261553 - 6261506
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  6261553 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6261506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 7324827 - 7324780
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7324827 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7324780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 7391618 - 7391665
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  7391618 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7391665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 11615070 - 11615023
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  11615070 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 11615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 16765213 - 16765166
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  16765213 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 16765166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 18683151 - 18683198
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  18683151 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaa 18683198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 21008887 - 21008934
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  21008887 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21008934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 22279639 - 22279686
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    ||||||||||||||||||||  |||||||||||||| ||| |||||||    
T  22279639 acacgtggcacctcacttaggatgccacgtcagcattgaccgagtcaa 22279686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 23291397 - 23291444
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  23291397 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 27223450 - 27223497
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  27223450 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 27223497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 31951377 - 31951330
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  31951377 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31951330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 75
Target Start/End: Original strand, 238927 - 238956
Alignment:
Q  46 ttaggcttaatagcagttttcgccccctaa 75  Q
    ||||||||||||||||||||||||||||||    
T  238927 ttaggcttaatagcagttttcgccccctaa 238956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 1815117 - 1815150
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  1815117 acacgtggcacctcacttagggtgccacgtcagc 1815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 2100523 - 2100556
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  2100523 acacgtggcacctcacttagggtgccacgtcagc 2100556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 2203331 - 2203286
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaa 221  Q
    ||||||||| |||||| ||||||||||||| ||||| |||||||||    
T  2203331 gtggcacctgacttagggtgccacgtcagcgtagaccgagtcaaaa 2203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 2203395 - 2203358
Alignment:
Q  89 aaaactgccccctaacttttgcaattgtagtagttttg 126  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  2203395 aaaactgccccctaagttttgcaactgtagtagttttg 2203358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 11277798 - 11277765
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  11277798 acacgtggcacctcacttagggtgccacgtcagc 11277765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 11446118 - 11446151
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  11446118 acacgtggcacctcacttagggtgccacgtcagc 11446151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 13042580 - 13042547
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  13042580 acacgtggcacctcacttagggtgccacgtcagc 13042547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 16735739 - 16735690
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaa 221  Q
    ||||||| |||||||||||| ||||||||||||| | ||| |||||||||    
T  16735739 acacgtgacacctcacttagggtgccacgtcagcgttgaccgagtcaaaa 16735690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 17248810 - 17248745
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||| || ||||||||||| ||||||||||| | ||||| || |||||||||| ||| |||||    
T  17248810 taacacggggtacctcacttagggtgccacgtcaacgtagaccgaatcaaaattggtcttaagggc 17248745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 23883261 - 23883228
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  23883261 acacgtggcacctcacttagggtgccacgtcagc 23883228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 27771355 - 27771404
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaa 221  Q
    ||||||| |||||||||||| ||||||||||||| | ||| |||||||||    
T  27771355 acacgtgacacctcacttagggtgccacgtcagcgttgaccgagtcaaaa 27771404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 28930636 - 28930603
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  28930636 acacgtggcacctcacttagggtgccacgtcagc 28930603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 34705517 - 34705550
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  34705517 acacgtggcacctcacttagggtgccacgtcagc 34705550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 10727335 - 10727399
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||| |||||| ||||||||| || |||||||||| ||||   ||||||||||||||||| ||||    
T  10727335 aacatgtggcatctcacttagggtcccacgtcagcgtagatcaagtcaaaattggccttgggggc 10727399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 26601703 - 26601659
Alignment:
Q  89 aaaactgccccctaacttttgcaattgtagtagttttgatccccc 133  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||||||    
T  26601703 aaaaccgccccctaaattttgcaactgtagcagttttgatccccc 26601659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 3243 - 3184
Alignment:
Q  176 gtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||| ||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||    
T  3243 gtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggc 3184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 3877 - 3830
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  3877 acacgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 3830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 9511 - 9457
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattg 224  Q
    ||||||||| ||||||||||||  |||||||||||| ||||| ||||||||||||    
T  9511 taacacgtgacacctcacttaggatgccacgtcagcgtagaccgagtcaaaattg 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 25041 - 25095
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    ||||| |||||||||||||||||||||||||||||  |||  |||||||||||||    
T  25041 aacacatggcacctcacttagagtgccacgtcagcgaagatcgagtcaaaattgg 25095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 2819 - 2880
Alignment:
Q  85 ctacaaaactgccccctaacttttgcaattgtagtagttttgatcccccaagaccaattttt 146  Q
    ||||||||||||||||||| |||| ||| ||||| |||||||   |||||||||||||||||    
T  2819 ctacaaaactgccccctaaattttacaactgtagcagttttggctccccaagaccaattttt 2880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 9585 - 9520
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||||||||||| |||   || ||||||||| ||||| |||||||||||||||||| ||||    
T  9585 taacacgtggcacctcatttaagatgtcacgtcagcctagaccgagtcaaaattggccttgggggc 9520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 577 - 512
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||| || ||||||| |||| |||||||||||| |||||| ||||||||||||| |||| ||||    
T  577 taacacatgacacctcatttagggtgccacgtcagtatagaccgagtcaaaattggtcttgggggc 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 46215 - 46280
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    |||||||| ||  ||||||||| ||||||||||||| ||||| |||||||||||| ||||| ||||    
T  46215 taacacgtagcgtctcacttagggtgccacgtcagcgtagactgagtcaaaattgaccttgggggc 46280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 292 - 236
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttg 230  Q
    |||||||||||||||||| ||| ||||||||  ||||| ||||||||||| ||||||    
T  292 acgtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgccttg 236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0864 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0864
Description:

Target: scaffold0864; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 2816 - 2769
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2816 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 10078 - 10125
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  10078 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 21830 - 21775
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattgg 225  Q
    ||||||||| || ||||||| | ||||||||||||| ||||| |||||||||||||    
T  21830 taacacgtgacaactcacttggggtgccacgtcagcgtagaccgagtcaaaattgg 21775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 20767 - 20814
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  20767 acacgtggcacctcacttagggtgccacgtcagcgtggaccgagtcaa 20814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 93976 - 93925
Alignment:
Q  170 taacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaa 221  Q
    |||||||| | ||||||||||| ||||||||||||| ||||| |||||||||    
T  93976 taacacgtagtacctcacttagggtgccacgtcagcgtagaccgagtcaaaa 93925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 139316 - 139363
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  139316 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 400877 - 400830
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagcatagacagagtcaa 219  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  400877 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 400830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 41 - 8
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  41 acacgtggcacctcacttagggtgccacgtcagc 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 1356 - 1323
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  1356 acacgtggcacctcacttagggtgccacgtcagc 1323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 20083 - 20022
Alignment:
Q  174 acgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||| |||||||||||| ||||||||| ||| ||||  |||||||||||||| ||| ||||    
T  20083 acgtgacacctcacttagggtgccacgttagcgtagatcgagtcaaaattggctttgggggc 20022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 12799 - 12832
Alignment:
Q  172 acacgtggcacctcacttagagtgccacgtcagc 205  Q
    |||||||||||||||||||| |||||||||||||    
T  12799 acacgtggcacctcacttagggtgccacgtcagc 12832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 19170 - 19234
Alignment:
Q  171 aacacgtggcacctcacttagagtgccacgtcagcatagacagagtcaaaattggccttgagggc 235  Q
    ||||||||| ||||||| ||| |||| | |||||| ||||| ||| |||||||||||||| ||||    
T  19170 aacacgtggtacctcacgtagggtgctatgtcagcgtagaccgagccaaaattggccttgggggc 19234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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