View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3529_high_15 (Length: 250)
Name: NF3529_high_15
Description: NF3529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3529_high_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 41124646 - 41124885
Alignment:
| Q |
11 |
aagcaaaggtcctcattattcactaataataaccatttttacaagctaaacttacaagagaaggaaatgcatgctaattaatctagccctcttgcacctg |
110 |
Q |
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| T |
41124646 |
aagcaaaggtgctcattattcactaataataaccatttttacaagctaaacttacaagagaaggaaatgcatgctaattaatctagccctcttgcacctg |
41124745 |
T |
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| Q |
111 |
caagttaaagttattttacttacattacaggggcacaaatacacaacaaaatcacaatcttattgcatgtcctctagctagctagttcactaattattaa |
210 |
Q |
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| T |
41124746 |
caagttaaagttattttacttacattacaggggcacaaatacacaacaaaatcacaatcttattgcatgtcctctagctagctagttcactaattattaa |
41124845 |
T |
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| Q |
211 |
aaatgaaatnnnnnnngcactaaaactgtgtataggcctc |
250 |
Q |
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| T |
41124846 |
aaatgaaataaaaaaagcactaaaaatgtgtataggcctc |
41124885 |
T |
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