View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3532_high_7 (Length: 248)
Name: NF3532_high_7
Description: NF3532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3532_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14068381 - 14068149
Alignment:
| Q |
1 |
tcatgattatgtcggttgaggcaataaaatccaacatgctacgaagaaagtgacaacatcatggaagaacaaagtcagaagaaaccgaaaatcctctgcc |
100 |
Q |
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| T |
14068381 |
tcatgattatgtcggttgaggcaataaaatccaacatgctacgaagaaagtgacaacatcatggaagaacaaagtcagaagaaaccgaaaatcctctgcc |
14068282 |
T |
|
| Q |
101 |
tccatggattcaggaccagtggtgaaatcctcaagaaactagttttacgttggcctgaaactgtaatacaaaaattggacctcgttttcctcgatggtcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14068281 |
tccatggattcaggaccagtggtgaaatcctcaagaaactagttttacgttggcctgaaactgtaatacaaaaattggacctcgttttcctcgatggtcc |
14068182 |
T |
|
| Q |
201 |
atttccagcacaaggaaaatcagatgttgaagg |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
14068181 |
atttccagcacaaggaaaatcagatgttgaagg |
14068149 |
T |
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