View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3536_high_16 (Length: 337)

Name: NF3536_high_16
Description: NF3536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3536_high_16
NF3536_high_16
[»] chr3 (62 HSPs)
chr3 (18-289)||(20498167-20498439)
chr3 (50-289)||(996062-996302)
chr3 (18-289)||(10139122-10139394)
chr3 (18-289)||(19253785-19254057)
chr3 (18-289)||(37820453-37820725)
chr3 (16-286)||(3999624-3999895)
chr3 (50-289)||(25418356-25418595)
chr3 (18-289)||(44762011-44762285)
chr3 (89-289)||(3206181-3206382)
chr3 (50-268)||(33807796-33808015)
chr3 (50-289)||(40246834-40247073)
chr3 (18-289)||(35337693-35337963)
chr3 (89-289)||(6589593-6589795)
chr3 (18-285)||(54625550-54625818)
chr3 (50-289)||(29448833-29449074)
chr3 (56-260)||(33996547-33996751)
chr3 (58-289)||(53929104-53929336)
chr3 (50-289)||(52114518-52114759)
chr3 (97-289)||(6035031-6035222)
chr3 (18-251)||(51699495-51699727)
chr3 (178-289)||(6131210-6131321)
chr3 (91-231)||(22057793-22057933)
chr3 (56-271)||(17946284-17946499)
chr3 (50-277)||(29029996-29030222)
chr3 (56-271)||(11431522-11431737)
chr3 (97-271)||(18749649-18749823)
chr3 (97-271)||(36674125-36674299)
chr3 (97-259)||(40897181-40897343)
chr3 (97-271)||(44906508-44906682)
chr3 (59-271)||(26107260-26107472)
chr3 (97-271)||(34484025-34484199)
chr3 (137-274)||(5825139-5825276)
chr3 (97-288)||(27899381-27899560)
chr3 (97-268)||(31646284-31646453)
chr3 (97-271)||(32580214-32580387)
chr3 (115-289)||(52079982-52080142)
chr3 (97-271)||(52810415-52810589)
chr3 (97-271)||(50903235-50903412)
chr3 (97-271)||(54628880-54629055)
chr3 (97-271)||(48379194-48379368)
chr3 (97-271)||(51737721-51737895)
chr3 (92-212)||(1440006-1440126)
chr3 (97-271)||(52617966-52618134)
chr3 (97-255)||(20833029-20833187)
chr3 (155-289)||(1439869-1440005)
chr3 (97-271)||(10728646-10728810)
chr3 (102-271)||(39842489-39842648)
chr3 (56-271)||(37454857-37455062)
chr3 (97-200)||(10660572-10660675)
chr3 (98-271)||(50762055-50762218)
chr3 (97-194)||(539476-539573)
chr3 (56-189)||(23753463-23753596)
chr3 (97-289)||(44276426-44276603)
chr3 (97-259)||(39038077-39038229)
chr3 (213-268)||(33807678-33807733)
chr3 (140-234)||(55235264-55235359)
chr3 (56-160)||(12103625-12103729)
chr3 (97-248)||(6975785-6975924)
chr3 (203-271)||(45862984-45863052)
chr3 (117-187)||(23535890-23535960)
chr3 (191-271)||(15492862-15492942)
chr3 (202-258)||(12103732-12103789)
[»] chr2 (36 HSPs)
chr2 (18-289)||(24776315-24776586)
chr2 (18-289)||(16269651-16269923)
chr2 (18-289)||(20605196-20605468)
chr2 (18-289)||(31170602-31170874)
chr2 (50-289)||(305443-305683)
chr2 (18-289)||(35317022-35317294)
chr2 (50-289)||(14198555-14198795)
chr2 (18-288)||(5093025-5093297)
chr2 (50-289)||(12407372-12407612)
chr2 (50-289)||(22551741-22551981)
chr2 (50-289)||(43847638-43847878)
chr2 (89-289)||(9120157-9120358)
chr2 (18-289)||(44765735-44765998)
chr2 (18-289)||(32125210-32125486)
chr2 (18-289)||(1789402-1789676)
chr2 (97-271)||(10657445-10657619)
chr2 (97-271)||(28844594-28844768)
chr2 (97-271)||(33135662-33135835)
chr2 (89-289)||(26601191-26601379)
chr2 (97-271)||(25288198-25288372)
chr2 (97-271)||(18177306-18177480)
chr2 (97-271)||(26788823-26788996)
chr2 (97-200)||(28740351-28740454)
chr2 (148-271)||(43078653-43078776)
chr2 (100-271)||(3463714-3463875)
chr2 (97-200)||(7026643-7026746)
chr2 (98-289)||(10125280-10125460)
chr2 (98-259)||(13833441-13833592)
chr2 (47-189)||(3574836-3574978)
chr2 (97-189)||(6224626-6224719)
chr2 (89-200)||(378968-379079)
chr2 (97-173)||(215320-215396)
chr2 (18-110)||(20605112-20605204)
chr2 (98-180)||(21370638-21370720)
chr2 (210-259)||(6224576-6224625)
chr2 (203-271)||(215235-215302)
[»] scaffold0400 (1 HSPs)
scaffold0400 (18-289)||(15009-15281)
[»] scaffold0365 (1 HSPs)
scaffold0365 (18-289)||(15652-15924)
[»] chr7 (64 HSPs)
chr7 (18-289)||(973144-973416)
chr7 (23-286)||(7719238-7719502)
chr7 (18-289)||(43581065-43581337)
chr7 (18-289)||(40996624-40996896)
chr7 (18-286)||(44343374-44343643)
chr7 (18-289)||(30440756-30441028)
chr7 (18-286)||(12893368-12893639)
chr7 (18-289)||(18914710-18914982)
chr7 (18-289)||(34695233-34695505)
chr7 (89-282)||(7718345-7718538)
chr7 (50-289)||(47914258-47914498)
chr7 (18-289)||(34008972-34009245)
chr7 (50-289)||(47879160-47879400)
chr7 (89-289)||(39219352-39219552)
chr7 (55-289)||(20275238-20275473)
chr7 (97-288)||(10068499-10068689)
chr7 (18-286)||(32142895-32143166)
chr7 (18-289)||(7113416-7113684)
chr7 (97-271)||(3022958-3023132)
chr7 (98-289)||(12963734-12963919)
chr7 (97-271)||(23101330-23101504)
chr7 (114-236)||(43679470-43679592)
chr7 (47-271)||(9882231-9882454)
chr7 (97-284)||(33382669-33382855)
chr7 (97-271)||(8675365-8675539)
chr7 (97-271)||(18838421-18838595)
chr7 (97-271)||(28342379-28342553)
chr7 (97-271)||(39784131-39784305)
chr7 (97-284)||(3797049-3797225)
chr7 (97-259)||(29614770-29614932)
chr7 (98-271)||(28034799-28034972)
chr7 (56-270)||(12740364-12740577)
chr7 (117-289)||(43187334-43187505)
chr7 (97-271)||(7993174-7993348)
chr7 (49-271)||(9179864-9180076)
chr7 (97-271)||(44256760-44256934)
chr7 (97-271)||(44121904-44122068)
chr7 (98-271)||(40460711-40460874)
chr7 (97-198)||(31638914-31639015)
chr7 (56-271)||(509647-509852)
chr7 (97-270)||(19251571-19251734)
chr7 (97-235)||(25805724-25805862)
chr7 (89-231)||(32883806-32883948)
chr7 (18-247)||(727472-727692)
chr7 (97-200)||(46405496-46405599)
chr7 (89-222)||(10676463-10676596)
chr7 (140-271)||(19810874-19810995)
chr7 (151-271)||(37972861-37972981)
chr7 (97-200)||(33892315-33892418)
chr7 (97-200)||(37327959-37328062)
chr7 (98-200)||(39028130-39028232)
chr7 (136-287)||(1470213-1470362)
chr7 (97-189)||(17001099-17001191)
chr7 (47-271)||(29585497-29585710)
chr7 (151-271)||(41827390-41827510)
chr7 (136-195)||(447854-447913)
chr7 (171-288)||(10617024-10617141)
chr7 (97-189)||(47066735-47066828)
chr7 (240-289)||(31639032-31639082)
chr7 (97-161)||(29893113-29893177)
chr7 (19-129)||(10616903-10617012)
chr7 (89-236)||(44623315-44623452)
chr7 (240-286)||(43863479-43863525)
chr7 (247-285)||(45276312-45276350)
[»] chr6 (20 HSPs)
chr6 (18-289)||(6197453-6197725)
chr6 (18-289)||(1391582-1391854)
chr6 (18-289)||(2300714-2300985)
chr6 (18-289)||(28002623-28002895)
chr6 (18-272)||(29076556-29076811)
chr6 (18-272)||(29111529-29111785)
chr6 (89-271)||(31895725-31895907)
chr6 (89-282)||(7051874-7052067)
chr6 (89-259)||(7497105-7497274)
chr6 (97-271)||(14262427-14262601)
chr6 (89-259)||(34759056-34759226)
chr6 (97-259)||(34773446-34773608)
chr6 (97-271)||(30385063-30385225)
chr6 (136-271)||(31067569-31067694)
chr6 (217-288)||(2238668-2238741)
chr6 (151-271)||(4200431-4200541)
chr6 (89-160)||(656994-657065)
chr6 (240-289)||(657116-657165)
chr6 (117-180)||(3848267-3848330)
chr6 (225-265)||(11113733-11113773)
[»] chr5 (26 HSPs)
chr5 (18-286)||(21147026-21147294)
chr5 (89-289)||(33656017-33656217)
chr5 (89-289)||(7016714-7016915)
chr5 (18-289)||(27458925-27459196)
chr5 (18-288)||(139232-139504)
chr5 (56-289)||(5272894-5273128)
chr5 (50-289)||(32157869-32158113)
chr5 (89-246)||(849177-849334)
chr5 (97-286)||(9689696-9689884)
chr5 (97-271)||(1152097-1152271)
chr5 (55-232)||(6460788-6460965)
chr5 (47-271)||(13925919-13926143)
chr5 (97-271)||(14000099-14000273)
chr5 (97-277)||(4550245-4550425)
chr5 (97-271)||(39852383-39852557)
chr5 (97-259)||(7947579-7947741)
chr5 (97-271)||(5949147-5949310)
chr5 (97-271)||(4240456-4240620)
chr5 (97-226)||(14465266-14465395)
chr5 (97-271)||(40013706-40013870)
chr5 (89-286)||(9220696-9220883)
chr5 (97-271)||(22746335-22746501)
chr5 (97-200)||(1461203-1461306)
chr5 (97-189)||(37013952-37014044)
chr5 (228-285)||(1511330-1511387)
chr5 (89-141)||(16894026-16894078)
[»] chr8 (39 HSPs)
chr8 (18-286)||(42938095-42938364)
chr8 (18-289)||(2704794-2705066)
chr8 (18-289)||(5576595-5576868)
chr8 (50-289)||(24501788-24502028)
chr8 (50-289)||(26374405-26374645)
chr8 (18-289)||(7506874-7507146)
chr8 (18-282)||(23115152-23115415)
chr8 (18-289)||(42735252-42735524)
chr8 (50-289)||(42937344-42937582)
chr8 (55-285)||(10392217-10392447)
chr8 (18-289)||(41479056-41479318)
chr8 (18-289)||(43959617-43959878)
chr8 (90-271)||(4403138-4403319)
chr8 (97-279)||(10295366-10295549)
chr8 (97-271)||(9288451-9288625)
chr8 (97-271)||(14782129-14782303)
chr8 (97-271)||(19717875-19718049)
chr8 (97-271)||(44725804-44725978)
chr8 (97-271)||(18958721-18958895)
chr8 (97-271)||(26856105-26856279)
chr8 (92-286)||(4949995-4950188)
chr8 (97-271)||(39467462-39467636)
chr8 (18-189)||(32711358-32711529)
chr8 (89-259)||(43166696-43166866)
chr8 (97-271)||(32497563-32497727)
chr8 (97-271)||(16362234-16362398)
chr8 (139-289)||(39189793-39189940)
chr8 (97-268)||(18305968-18306129)
chr8 (139-289)||(13478226-13478376)
chr8 (97-271)||(7466373-7466537)
chr8 (97-271)||(42305789-42305953)
chr8 (97-189)||(31623733-31623825)
chr8 (97-271)||(37857157-37857321)
chr8 (97-189)||(4031334-4031426)
chr8 (137-238)||(8410423-8410526)
chr8 (203-271)||(9770434-9770502)
chr8 (124-180)||(41070010-41070066)
chr8 (213-254)||(32711305-32711346)
chr8 (243-289)||(14028248-14028294)
[»] chr4 (64 HSPs)
chr4 (18-289)||(25331089-25331361)
chr4 (18-289)||(41881056-41881331)
chr4 (50-289)||(53275829-53276069)
chr4 (55-289)||(34228559-34228794)
chr4 (18-289)||(1112851-1113121)
chr4 (18-289)||(32950811-32951084)
chr4 (18-289)||(22201973-22202245)
chr4 (18-289)||(37046425-37046700)
chr4 (18-289)||(55302801-55303077)
chr4 (89-289)||(42786713-42786913)
chr4 (89-287)||(1044836-1045035)
chr4 (18-289)||(30009653-30009925)
chr4 (50-289)||(12112935-12113176)
chr4 (18-288)||(39479332-39479605)
chr4 (50-289)||(7007364-7007605)
chr4 (18-289)||(24130957-24131220)
chr4 (103-287)||(41320853-41321038)
chr4 (98-289)||(3436631-3436823)
chr4 (18-289)||(46635624-46635890)
chr4 (18-236)||(28541656-28541874)
chr4 (50-237)||(25446041-25446227)
chr4 (18-245)||(19740929-19741156)
chr4 (105-288)||(31314719-31314893)
chr4 (50-289)||(40537136-40537361)
chr4 (89-285)||(9163105-9163292)
chr4 (101-282)||(27454061-27454244)
chr4 (97-271)||(5441441-5441615)
chr4 (97-271)||(27768093-27768267)
chr4 (97-271)||(37828397-37828571)
chr4 (97-271)||(54341181-54341355)
chr4 (47-285)||(39307234-39307472)
chr4 (47-271)||(51320908-51321132)
chr4 (89-271)||(54853463-54853645)
chr4 (132-236)||(7249795-7249899)
chr4 (18-222)||(23464913-23465117)
chr4 (99-257)||(44770862-44771020)
chr4 (97-271)||(32322128-32322302)
chr4 (97-271)||(37915864-37916038)
chr4 (97-288)||(36479221-36479400)
chr4 (97-271)||(23987251-23987415)
chr4 (18-209)||(25504696-25504887)
chr4 (122-271)||(48261189-48261338)
chr4 (97-200)||(29649733-29649836)
chr4 (172-289)||(8711978-8712094)
chr4 (97-272)||(30967303-30967468)
chr4 (172-271)||(24736447-24736546)
chr4 (97-271)||(49501514-49501680)
chr4 (97-271)||(49507579-49507745)
chr4 (97-289)||(12913261-12913442)
chr4 (137-271)||(56445350-56445474)
chr4 (191-289)||(11090435-11090532)
chr4 (97-259)||(41725162-41725321)
chr4 (97-189)||(49834890-49834982)
chr4 (97-271)||(28483936-28484099)
chr4 (89-260)||(41581795-41581965)
chr4 (98-222)||(28370962-28371086)
chr4 (97-189)||(32684065-32684156)
chr4 (112-271)||(5800029-5800179)
chr4 (97-200)||(50018288-50018391)
chr4 (185-287)||(13400785-13400887)
chr4 (151-222)||(20021424-20021495)
chr4 (89-143)||(7249937-7249991)
chr4 (210-271)||(32684003-32684064)
chr4 (192-272)||(36727944-36728023)
[»] chr1 (49 HSPs)
chr1 (18-289)||(19451784-19452056)
chr1 (49-289)||(21222130-21222371)
chr1 (18-289)||(28824349-28824620)
chr1 (50-289)||(50192526-50192767)
chr1 (97-289)||(45759985-45760178)
chr1 (20-289)||(47654327-47654599)
chr1 (50-289)||(49198245-49198484)
chr1 (18-289)||(29556056-29556328)
chr1 (18-269)||(35279624-35279875)
chr1 (55-288)||(6304227-6304464)
chr1 (56-289)||(35679102-35679338)
chr1 (18-272)||(45535896-45536156)
chr1 (50-289)||(47780695-47780935)
chr1 (90-288)||(32588936-32589129)
chr1 (18-277)||(49418036-49418295)
chr1 (18-231)||(730100-730314)
chr1 (98-288)||(9577411-9577600)
chr1 (136-288)||(31572174-31572327)
chr1 (97-271)||(48177457-48177631)
chr1 (89-285)||(37014622-37014817)
chr1 (47-271)||(6312555-6312779)
chr1 (97-271)||(29396383-29396557)
chr1 (97-271)||(25612188-25612362)
chr1 (47-289)||(33025493-33025726)
chr1 (97-271)||(51701611-51701785)
chr1 (18-237)||(48524271-48524490)
chr1 (56-271)||(28387388-28387603)
chr1 (97-271)||(15835048-15835222)
chr1 (97-258)||(46328073-46328234)
chr1 (97-271)||(9322495-9322669)
chr1 (98-271)||(29219318-29219481)
chr1 (18-153)||(22183322-22183457)
chr1 (97-271)||(38536094-38536258)
chr1 (97-271)||(38558312-38558476)
chr1 (97-271)||(45272617-45272780)
chr1 (97-189)||(18798522-18798614)
chr1 (97-255)||(5495117-5495265)
chr1 (97-180)||(49230917-49231000)
chr1 (110-271)||(48668780-48668931)
chr1 (139-198)||(955823-955882)
chr1 (136-286)||(51085865-51086014)
chr1 (229-288)||(48524805-48524865)
chr1 (89-232)||(47784410-47784542)
chr1 (18-144)||(953771-953899)
chr1 (240-289)||(730308-730357)
chr1 (98-189)||(31622536-31622626)
chr1 (156-258)||(38319996-38320098)
chr1 (153-199)||(43885157-43885203)
chr1 (210-271)||(18798615-18798676)
[»] scaffold0151 (1 HSPs)
scaffold0151 (89-289)||(38581-38781)
[»] scaffold0113 (1 HSPs)
scaffold0113 (89-289)||(38872-39072)
[»] scaffold0004 (1 HSPs)
scaffold0004 (89-287)||(102125-102324)
[»] scaffold0037 (1 HSPs)
scaffold0037 (50-289)||(100202-100444)
[»] scaffold0276 (1 HSPs)
scaffold0276 (18-277)||(528-787)
[»] scaffold0110 (1 HSPs)
scaffold0110 (47-271)||(39612-39836)
[»] scaffold0543 (1 HSPs)
scaffold0543 (97-271)||(10598-10772)
[»] scaffold1504 (1 HSPs)
scaffold1504 (97-272)||(901-1076)
[»] scaffold0042 (1 HSPs)
scaffold0042 (89-271)||(58071-58254)
[»] scaffold0306 (1 HSPs)
scaffold0306 (97-271)||(13920-14084)
[»] scaffold0152 (3 HSPs)
scaffold0152 (97-200)||(21304-21407)
scaffold0152 (227-271)||(21243-21287)
scaffold0152 (227-271)||(28510-28554)
[»] scaffold0054 (1 HSPs)
scaffold0054 (89-268)||(36905-37084)
[»] scaffold0922 (1 HSPs)
scaffold0922 (97-196)||(4238-4337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (139-232)||(199905-199998)
[»] scaffold0347 (1 HSPs)
scaffold0347 (191-271)||(14892-14972)
[»] scaffold0839 (1 HSPs)
scaffold0839 (160-271)||(3687-3798)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 8e-92; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 20498167 - 20498439
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       ||||||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  20498167 caatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 20498266  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  20498267 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 20498366  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20498367 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 996302 - 996062
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||| ||||||       ||||||| |||||||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  996302 ttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaat 996203  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  996202 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 996103  T
Q  250 gagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  996102 gagatttcttaggattgtttttttcttttaagattttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 10139394 - 10139122
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| ||||||  || ||||||       ||||||| |||||||||||||| | ||||    
T  10139394 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 10139295  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10139294 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 10139195  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10139194 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 19253785 - 19254057
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  19253785 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 19253884  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  19253885 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaa 19253984  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  19253985 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaaaattttacta 19254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 37820725 - 37820453
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||        |||||| |||||||||||||||| ||||    
T  37820725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaa 37820626  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  37820625 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaa 37820526  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37820525 ttttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttttcttttaagattttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 16 - 286
Target Start/End: Complemental strand, 3999895 - 3999624
Alignment:
Q  16 cacaatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagattttt 115  Q
    ||||||||||||| |||| |||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||    
T  3999895 cacaatcaagactttttctaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 3999796  T
Q  116 aatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtga 215  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3999795 aatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtga 3999696  T
Q  216 aattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagatttta 286  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  3999695 aattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagatttta 3999624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 25418356 - 25418595
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| ||||||||||||| |||| |||||| |||||| |||||    
T  25418356 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaat 25418455  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  25418456 cattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacat 25418555  T
Q  250 gagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  25418556 gagattccttaggattgttttttcttttaagattttacta 25418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 44762285 - 44762011
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||| ||||||||||       ||| |||||||||||||||||| | ||||    
T  44762285 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaa 44762186  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  44762185 tcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaa 44762086  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt---cttttaagattttacta 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||||||||||||||    
T  44762085 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgttttttttctttttaagattttacta 44762011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 3206382 - 3206181
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3206382 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 3206283  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttac 287  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3206282 gatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 3206183  T
Q  288 ta 289  Q
    ||    
T  3206182 ta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 50 - 268
Target Start/End: Complemental strand, 33808015 - 33807796
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaa 148  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | |||||||||||||||| | |||||||||||| ||||    
T  33808015 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 33807916  T
Q  149 tcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 248  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  33807915 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 33807816  T
Q  249 tgagatttcttaggattgtt 268  Q
    ||||||||||||||||||||    
T  33807815 tgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 40246834 - 40247073
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       || |||| |||||||||||||| | ||||||| ||||||||  |||||||||||| |||||    
T  40246834 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaat 40246933  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  40246934 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 40247033  T
Q  250 gagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  40247034 gagattccttatgattgttttttcttttaagattttacta 40247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 35337693 - 35337963
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| ||||||  |||||||||       ||||||| |||||||||||||| | ||||    
T  35337693 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaa 35337792  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  35337793 tcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 35337892  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  35337893 ttttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgtttttttcttttaagattttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 89 - 289
Target Start/End: Original strand, 6589593 - 6589795
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||| ||||||||  |||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  6589593 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagatttt 6589692  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt--cttttaagatttta 286  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||    
T  6589693 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttttaagatttta 6589792  T
Q  287 cta 289  Q
    |||    
T  6589793 cta 6589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 18 - 285
Target Start/End: Original strand, 54625550 - 54625818
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| || |||  |||||||||        |||||| |||||||||||||| | ||||    
T  54625550 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaa 54625649  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  54625650 tcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 54625749  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagatttt 285  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  54625750 ttttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattgatttttgcttttaagatttt 54625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 29449074 - 29448833
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| ||||||  |||||||||       |||||||  ||||||||||||| | | ||||||||||||||  |||||||||||| |||||    
T  29449074 ttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaat 29448975  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  29448974 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacat 29448875  T
Q  250 gagatttcttaggattgtttttt--cttttaagattttacta 289  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  29448874 gagatttcttaggattgtttttttctttttaagattttacta 29448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 56 - 260
Target Start/End: Complemental strand, 33996751 - 33996547
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||| |||||||||||||| | |||||||||||||||| ||| ||||||||| |||||||||||    
T  33996751 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattca 33996652  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    ||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33996651 aatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatt 33996552  T
Q  256 tctta 260  Q
    |||||    
T  33996551 tctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 58 - 289
Target Start/End: Complemental strand, 53929336 - 53929104
Alignment:
Q  58 ttcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaa 157  Q
    |||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| ||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  158 tttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 257  Q
    | ||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||     
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttt 53929137  T
Q  258 ttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||| ||||||||||| |||||||||    
T  53929136 ttaggattgtttttttcttttaaaattttacta 53929104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 52114518 - 52114759
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaa 148  Q
    |||| ||||||||  |||||| ||||||||||       ||||||| |||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  52114518 ttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaa 52114617  T
Q  149 tcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 248  Q
    | |||||||||||| | |||||||||||||||||||||||||| ||||||||   |||||||||| |||||||||||||||||| |||||| ||||||||    
T  52114618 taattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaaca 52114717  T
Q  249 tgagatttcttaggatt-gttttttcttttaagattttacta 289  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  52114718 tgagatttcttaggattatttttttcttttaagattttacta 52114759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 97 - 289
Target Start/End: Complemental strand, 6035222 - 6035031
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||||||||||||  ||| ||| |||| ||||||||||||||||||||  | |||||||||||| |||||||||||||||    
T  6035222 gtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggatt 6035123  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||  ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| |||||||||    
T  6035122 ttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattg-tttttcttttaaaattttacta 6035031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 51699727 - 51699495
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||||||||||||| |||||| ||||||||||        |||||| |||||||||||||| | ||||    
T  51699727 caatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaa 51699628  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||  |||||||||||||||    
T  51699627 tcacttaaaaaa-atctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaa 51699529  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatga 251  Q
    ||||||||||||||| |||||  |||||||||||    
T  51699528 ttttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 6131321 - 6131210
Alignment:
Q  178 aatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttctttt 277  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttttctttt 6131222  T
Q  278 aagattttacta 289  Q
    ||||||||||||    
T  6131221 aagattttacta 6131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 22057793 - 22057933
Alignment:
Q  91 cttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttga 190  Q
    ||||| |||||| ||||||| | || ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22057793 cttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttga 22057892  T
Q  191 tggattttgttagattttctagtgaaattttagcatgaaaa 231  Q
    ||||||||||  |||||||||||||||||||| ||||||||    
T  22057893 tggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 56 - 271
Target Start/End: Original strand, 17946284 - 17946499
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||  |||||||||||||| |||| |||||||||||||  ||| ||| |||| |||||||||||    
T  17946284 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattca 17946383  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    |||||| || |||||||||||||||  ||||||||||||||||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||    
T  17946384 aatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 17946483  T
Q  256 tcttaggattgttttt 271  Q
    ||||  ||||||||||    
T  17946484 tcttgagattgttttt 17946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 50 - 277
Target Start/End: Original strand, 29029996 - 29030222
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||| | ||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  ||| |||||||| |||||    
T  29029996 ttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaag-tcttgtggtattcaaaat 29030094  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||||| ||||||    | ||||||||||||||    
T  29030095 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacat 29030194  T
Q  250 gagatttcttaggattgttttttctttt 277  Q
    ||||||||| |  ||| |||||||||||    
T  29030195 gagatttctaaaaattattttttctttt 29030222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 56 - 271
Target Start/End: Original strand, 11431522 - 11431737
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    ||||||||||||| | ||||||||||       ||||||  |||||||||||||| |||| |||| ||||||||  ||| |||||||| ||||||||| |    
T  11431522 tattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattta 11431621  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    ||||||||| |||||||||||||||  ||||||| ||||||||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||    
T  11431622 aatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 11431721  T
Q  256 tcttaggattgttttt 271  Q
    ||||  ||||||||||    
T  11431722 tcttgagattgttttt 11431737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 18749649 - 18749823
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||| || | |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  18749649 gtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 18749748  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  18749749 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 18749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 36674299 - 36674125
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  36674299 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 36674200  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  36674199 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 36674125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 259
Target Start/End: Original strand, 40897181 - 40897343
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  |||  ||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  40897181 gtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 40897280  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  40897281 ttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 44906682 - 44906508
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||| |||    
T  44906682 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatt 44906583  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || ||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  44906582 ttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttcttgagattgttttt 44906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 59 - 271
Target Start/End: Original strand, 26107260 - 26107472
Alignment:
Q  59 tcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaat 158  Q
    ||||| |||||| ||||||||||       ||||||  |||||||||||||| |||| |||| ||||||||  ||| |||||||| ||||||||||||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaat 26107359  T
Q  159 ttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttct 258  Q
    |||||| |||||||||||||||  ||||||||||||||||||  |||||| ||||| ||||||| || |||||||| ||| || |||| |||||||||||    
T  26107360 ttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttct 26107459  T
Q  259 taggattgttttt 271  Q
    |  ||||||||||    
T  26107460 tgagattgttttt 26107472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 34484199 - 34484025
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  | | |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  34484199 gtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 34484100  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  34484099 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 34484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 5825139 - 5825276
Alignment:
Q  137 tggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtct 236  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||| ||||||||  |||||| |||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  237 tttatgaaaacatgagatttcttaggattgttttttct 274  Q
    || ||||||||||||||||||||| |||||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttttct 5825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 97 - 288
Target Start/End: Original strand, 27899381 - 27899560
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| | ||  ||| ||||||||  ||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  27899381 gtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggatt 27899480  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
              |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||  |||||||||||||    
T  27899481 ----------ttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgttttttc--ttaagattttact 27899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 268
Target Start/End: Complemental strand, 31646453 - 31646284
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| |||||||| |||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||||    
T  31646453 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggatt 31646354  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt 268  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||  ||||||||||||  |||||||    
T  31646353 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttcttgagattgtt 31646284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 32580214 - 32580387
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||| |||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  32580214 gtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 32580312  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||   |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  32580313 ttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 32580387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 115 - 289
Target Start/End: Original strand, 52079982 - 52080142
Alignment:
Q  115 taatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtg 214  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||         ||||||||| ||    
T  52079982 taatcacttaaaaaaaatctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg-tgg---------gattttctaatg 52080071  T
Q  215 aaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg--ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||      ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  52080072 aaattttagcatgaaaaagt------tgaaaacatgagatttcttaggattgttttttttcttttaagattttacta 52080142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 52810415 - 52810589
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||| |||||||||||||||||||   |||||||||||||    
T  52810415 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggatt 52810514  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||| | ||||||| || |||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  52810515 ttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 52810589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 50903412 - 50903235
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaata---tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgg 193  Q
    |||||||||||||| |||| |||| |||||||| |   ||| |||||||| |||||||||||||||  ||| |||||||||||||||  |||||||||||    
T  50903412 gtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatgg 50903313  T
Q  194 attttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||  |||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  50903312 attttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 54628880 - 54629055
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggat 195  Q
    |||||||||||||| |||| |||||  |||||| | ||| |||||||| ||||||||||||||||| || |||||||||||||||  |||||||||||||    
T  54628880 gtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggat 54628979  T
Q  196 tttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||  |||||| ||||| ||||||| || |||||||||||| || |||| ||||||||||||  ||||||||||    
T  54628980 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgttttt 54629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 48379194 - 48379368
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||| ||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||   |||||||||||||    
T  48379194 gtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 48379293  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| |||||||  | ||||| |||||| ||||||| || |||||||||  ||||||||||    
T  48379294 ttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttcttgagattgttttt 48379368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 51737895 - 51737721
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  51737895 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 51737796  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| | ||| ||||||| || |||||||||||| || |||| || ||  |||||  ||||||||||    
T  51737795 ttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataagtattcttgagattgttttt 51737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 1440126 - 1440006
Alignment:
Q  92 ttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgat 191  Q
    |||| |||||||||||||| | ||||||||||||||||  |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  1440126 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgat 1440027  T
Q  192 ggattttgttagattttctag 212  Q
    ||||||| |  ||||||||||    
T  1440026 ggattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 52618134 - 52617966
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  52618134 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 52618035  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||      || |||||||| || |||| ||||||||||||  ||||||||||    
T  52618034 ttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatgagatttcttgagattgttttt 52617966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 255
Target Start/End: Original strand, 20833029 - 20833187
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||  ||| |||||||||||||||  ||||||||||||||    
T  20833029 gtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggatt 20833128  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    |||| ||||||  ||||| ||||||| || |||||||| ||| ||||||| || |||||    
T  20833129 ttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 1440005 - 1439869
Alignment:
Q  155 aaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagat 254  Q
    |||||| ||| ||||||||||||||| |||||||||| ||||||||  ||||||||||| ||||||| | |||||||||||||| | |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  255 ttcttaggattgtttttt--cttttaagattttacta 289  Q
    || |||||||||||||||   ||||||||||||||||    
T  1439905 tttttaggattgtttttttctttttaagattttacta 1439869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 10728810 - 10728646
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||| ||||  ||| ||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  10728810 gtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggatt 10728711  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  10728710 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 10728646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 271
Target Start/End: Complemental strand, 39842648 - 39842489
Alignment:
Q  102 caatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtt 201  Q
    |||||||||||||| |||||||||||||  ||| ||| |||| ||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||      
T  39842648 caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg-- 39842551  T
Q  202 agattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
            || || ||||||| || |||||||||||| ||||||| |||||||||||| |||||||||||    
T  39842550 --------taatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgttttt 39842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 56 - 271
Target Start/End: Original strand, 37454857 - 37455062
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||   ||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||    
T  37454857 tattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattca 37454956  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    |||||||||||||||||||||||||          || |||||||  |||||| ||||| ||||||| || |||||||| ||| ||||||| ||||||||    
T  37454957 aatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 37455046  T
Q  256 tcttaggattgttttt 271  Q
    ||||  ||||||||||    
T  37455047 tcttgagattgttttt 37455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 10660572 - 10660675
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  | | |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  10660572 gtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 10660671  T
Q  197 ttgt 200  Q
    ||||    
T  10660672 ttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 98 - 271
Target Start/End: Complemental strand, 50762218 - 50762055
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    |||||||||| || |||| || | ||||||||  ||| |||||||| |||||||||| |||||||||||||||||| ||||||  |||||||||||||||    
T  50762218 tattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattt 50762119  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  50762118 tg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 50762055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 539573 - 539476
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgga 194  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||| ||||||||||  ||||||||||||    
T  539573 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 23753596 - 23753463
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||  |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||    
T  23753596 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattca 23753497  T
Q  156 aatttcgaatgattgtttaataaatcagattttg 189  Q
    ||||||||| |||||||||||||||  |||||||    
T  23753496 aatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 97 - 289
Target Start/End: Original strand, 44276426 - 44276603
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||||||||||||  |||  ||||||| |||||||||||||||    | |||||||||||||||          ||||||    
T  44276426 gtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaat----------tggatt 44276511  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||  |||||||||||||||||||| || |||||| ||||| ||||| ||||||||||| || |||||  |||||||||||| | |||||||    
T  44276512 ttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt-atttttcttttaaaagtttacta 44276603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 259
Target Start/End: Original strand, 39038077 - 39038229
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| ||||||| |||||  ||| |||||||  ||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  39038077 gtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggatt 39038176  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||          |||| ||||||| || |||||||||||| || |||| ||||||||||||    
T  39038177 ttgt----------agtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 33807733 - 33807678
Alignment:
Q  213 tgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt 268  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  140 tatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgga-ttttgttagattttctagtgaaattttagcatgaaaaagt 234  Q
    |||| |||||||||||||||||||| |||||||||||||||  | |||||||||| ||||||  ||||||||| |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 160
Target Start/End: Original strand, 12103625 - 12103729
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||  ||||||||||||||||||| |||||||||||||  |||  ||||||| |||||||||||    
T  12103625 tattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattca 12103724  T
Q  156 aattt 160  Q
    |||||    
T  12103725 aattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 248
Target Start/End: Original strand, 6975785 - 6975924
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||| |  || |||||||| ||||||||||||||||||||  ||| |||| |||||          |||| |    
T  6975785 gtattcaatcaagacttttcatcatttaaaaagt--cttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaat 6975872  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 248  Q
    ||||  ||||||||||| |||||| ||||||||| ||||||| |||||||||    
T  6975873 ttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 45862984 - 45863052
Alignment:
Q  203 gattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  45862984 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 45863052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 23535960 - 23535890
Alignment:
Q  117 atcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattt 187  Q
    |||||||||||||  ||| |||||||| |||||||||||||||| ||| ||| ||||||| ||| ||||||    
T  23535960 atcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 15492942 - 15492862
Alignment:
Q  191 tggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||||||  ||| |||||||||||||||| || |||||| ||||| |||||  ||| |||||||||  ||||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgttttt 15492862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 12103732 - 12103789
Alignment:
Q  202 agattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca-tgagatttct 258  Q
    ||||||||||||||||||||| || ||| |||||||| ||||| ||| ||||||||||    
T  12103732 agattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 3e-91; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 24776315 - 24776586
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    |||||||||||||||| |||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  24776315 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 24776414  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24776415 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 24776514  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776515 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 24776586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 16269651 - 16269923
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  16269651 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 16269750  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  16269751 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaa 16269850  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16269851 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 20605196 - 20605468
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  20605196 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 20605295  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  20605296 tcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 20605395  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20605396 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 31170874 - 31170602
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  31170874 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 31170775  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31170774 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 31170675  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31170674 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 305683 - 305443
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||||||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||    
T  305683 ttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 305584  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  305583 cattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacat 305484  T
Q  250 gagatttcttaggattgttt-tttcttttaagattttacta 289  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  305483 gagatttcttaggattgtttatttcttttaagattttacta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 35317022 - 35317294
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       ||||||| ||||||||| |||||| ||||||||||       |||||||| ||||||||||||| | ||||    
T  35317022 caatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaa 35317121  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  35317122 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaa 35317221  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||||||||||||||    
T  35317222 ttttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgtttttttcttttaagattttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 14198795 - 14198555
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| || ||| ||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  || ||||||||| |||||    
T  14198795 ttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaat 14198696  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  14198695 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacat 14198596  T
Q  250 gagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  14198595 gagatttcttaggattgtttttttcttttaagattttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 288
Target Start/End: Complemental strand, 5093297 - 5093025
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| ||||||||||||||   ||||    
T  5093297 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaa 5093198  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  5093197 tcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaa 5093098  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt--ttttcttttaagattttact 288  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  5093097 ttttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgttttttttcttttaagattttact 5093025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 12407372 - 12407612
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||| ||| | ||||||||||||||||  |||||||||||| |||||    
T  12407372 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaat 12407471  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  12407472 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacat 12407571  T
Q  250 gagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  12407572 gagatttcttaagattgtttttttcttttaagattttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 22551981 - 22551741
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| ||||||||||||||||||  |||||||||||| |||||    
T  22551981 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaat 22551882  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
     |||||||||||||||||||||||| ||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  22551881 tattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacat 22551782  T
Q  250 gagatttcttaggattgtttttt-cttttaagattttacta 289  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  22551781 gagatttcttatgattgttttttccttttaagattttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 43847638 - 43847878
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  |||||| ||||| |||||    
T  43847638 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaat 43847737  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||| | ||||||||||    
T  43847738 cattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacat 43847837  T
Q  250 gagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  43847838 gagatttcttaggattgtttttttcttttaagattttacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 89 - 289
Target Start/End: Original strand, 9120157 - 9120358
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||||  ||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||| ||||  || ||||||||||||||| |||||||    
T  9120157 gtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagatttt 9120256  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttac 287  Q
    ||||||||||||  ||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9120257 gatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 9120356  T
Q  288 ta 289  Q
    ||    
T  9120357 ta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 44765735 - 44765998
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||| ||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||| ||| | ||||    
T  44765735 caatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaa 44765834  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  44765835 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaa 44765934  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||||||||         ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44765935 ttttagcat---------tttcatgaaaacatgagatttcttaggattgtttttttcttttaaaattttacta 44765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 32125210 - 32125486
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| || ||| ||||||||||       ||| ||| |||||||||||||| | ||||    
T  32125210 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaa 32125309  T
Q  118 t---cacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtg 214  Q
    |   || ||||||||  || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||     
T  32125310 tgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagta 32125409  T
Q  215 aaattttagcatgaaaaagtcttttatgaaaacatgagatttctt-aggattg-ttttttcttttaagattttacta 289  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |  |||| |||||||||||||||||||||||    
T  32125410 aaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaaaaattgtttttttcttttaagattttacta 32125486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 1789402 - 1789676
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||| ||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||| |  ||||||||||| | | ||||    
T  1789402 caatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaa 1789501  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  1789502 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaa 1789601  T
Q  218 ttttagcatgaaaaagtcttttatgaaaa-ca-tgagatttcttaggatt-gttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| || |||| || | | | |||||||||||  ||||||||||||| |||||||||    
T  1789602 ttttagcatgaaaaagtctttcatcaaaatcattcaaaattcttaggattatttttttcttttaaaattttacta 1789676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 10657445 - 10657619
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10657445 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 10657544  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||| ||| ||||||| |||| |||||||  ||||||||||    
T  10657545 ttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttcttgagattgttttt 10657619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 28844594 - 28844768
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  28844594 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggatt 28844693  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||   ||||| ||||| |||||||  | |||||||||||| || |||| ||||||||||||  ||||||||||    
T  28844694 ttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttcttgagattgttttt 28844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 33135662 - 33135835
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  33135662 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 33135761  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| || |||| ||||||||||||  ||||||||||    
T  33135762 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttcttgagattgttttt 33135835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 26601379 - 26601191
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||||||||||||||||||| | ||||||||||||||||  ||  |||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  26601379 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagatttt 26601280  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    | |||         ||||||||||||||| |||| |||  |||||| ||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  26601279 g-tgg---------gattttctagtgaaactttaacat-taaaagtttttgatgaaaacat-agattttttaggattgttttttcttttaagattttact 26601192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 25288198 - 25288372
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||| |||||| |||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||| |||    
T  25288198 gtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatt 25288297  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || || || |||||| ||||||| ||||||||||||  ||||||||||    
T  25288298 ttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttcttgagattgttttt 25288372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 18177306 - 18177480
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  | | |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||||    
T  18177306 gtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggatt 18177405  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| || |||| ||||||||||||  ||||||||||    
T  18177406 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttcttgagattgttttt 18177480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 26788823 - 26788996
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaata--tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgga 194  Q
    |||||||||||||| |||| |||| | |||||| |  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||    
T  26788823 gtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatgga 26788922  T
Q  195 ttttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||  |||||| ||||| ||||||| || |||||||||||| ||   || ||||||||||||  ||||||||||    
T  26788923 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aagatgagatttcttgagattgttttt 26788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 28740454 - 28740351
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  28740454 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 28740355  T
Q  197 ttgt 200  Q
    ||||    
T  28740354 ttgt 28740351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 43078653 - 43078776
Alignment:
Q  148 atcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaac 247  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||||  |||||| ||||| ||||||| ||||||||||||||| || ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  248 atgagatttcttaggattgttttt 271  Q
    || |||||||||  ||||||||||    
T  43078753 ataagatttcttgagattgttttt 43078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 3463714 - 3463875
Alignment:
Q  100 ttcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttg 199  Q
    ||||||||||| |||| |||| ||||||||  ||| ||||||||||||||||||||| |||| || |||||||||||||||  |||||||||||||||||    
T  3463714 ttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttg 3463813  T
Q  200 ttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
              ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  3463814 ----------tagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgagattgttttt 3463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 7026643 - 7026746
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  7026643 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 7026742  T
Q  197 ttgt 200  Q
    ||||    
T  7026743 ttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 289
Target Start/End: Complemental strand, 10125460 - 10125280
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||| | |||| |||||||||||||  |||  || |||| ||||||||||||||||| || |||||||||||||||          || ||||    
T  10125460 tattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattt 10125371  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||  |||||| ||||||||||||| || |||||||||||| || |||||| ||||||||||| ||||| |||||||||||| | |||||||    
T  10125370 tgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttcttaagattg-tttttcttttaaaagtttacta 10125280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 259
Target Start/End: Complemental strand, 13833592 - 13833441
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||| |||||||||||||||| ||| |||||||||||||||          |||||||    
T  13833592 tattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattt 13833503  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    |||  |||||| ||||| ||||||| || |||||||||||| |||| || ||||||||||||    
T  13833502 tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 3574836 - 3574978
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||| || |||||||||       ||||||  |||||||||||||| |||| |||||||||||||  ||| ||| |||| ||    
T  3574836 gttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaa 3574935  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||||||| |||||||||||||||  |||||||    
T  3574936 aatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 6224719 - 6224626
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    ||||||||||||||||||| ||||||| ||||| | ||| |||||||| ||||| |||||||||||||| |||| ||||||||||  |||||||    
T  6224719 gtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 378968 - 379079
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||| | ||||  ||| ||||||||  | |  ||||||| |||||||||||||||| ||| |||||||||||||||  ||||||    
T  378968 gtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 379067  T
Q  189 gatggattttgt 200  Q
    ||| ||||||||    
T  379068 gatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 215396 - 215320
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgttt 173  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||| ||| || ||||||||    
T  215396 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 20605112 - 20605204
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaaga 110  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| ||||||||||||||    
T  20605112 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 21370720 - 21370638
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaat 180  Q
    ||||||||||| |  ||| |||||| ||||||  ||| |||||||| |||||||||||||||| |||  ||||||| ||||||    
T  21370720 tattcaatcaaaaaatttcatcactcaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 6224625 - 6224576
Alignment:
Q  210 tagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  6224625 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 215302 - 215235
Alignment:
Q  203 gattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||| |  ||||||||||    
T  215302 gattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgttttt 215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 15281 - 15009
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       |||||||||||||||||||||| | ||||    
T  15281 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaa 15182  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15181 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 15082  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  15081 ttttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 15924 - 15652
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       |||||||||||||||||||||| | ||||    
T  15924 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaa 15825  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15824 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 15725  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  15724 ttttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 973144 - 973416
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       ||||||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  973144 caatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 973243  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  973244 tcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 973343  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  973344 ttttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 23 - 286
Target Start/End: Complemental strand, 7719502 - 7719238
Alignment:
Q  23 aagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcact 122  Q
    |||||||||||||||||       || |||| ||||||||| || ||||||||||||||       ||||||| |||||||||||||| | |||||||||    
T  7719502 aagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcact 7719403  T
Q  123 taaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaatttta 222  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  7719402 taaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7719303  T
Q  223 gcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagatttta 286  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7719302 gcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatttta 7719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 43581337 - 43581065
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  43581337 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaa 43581238  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  43581237 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 43581138  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggatt-gttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43581137 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattatttttttcttttaagattttacta 43581065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 40996896 - 40996624
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || | || ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  40996896 caatcaagactctttccaatttaaaaaaagtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 40996797  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    || |||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40996796 tcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaa 40996697  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40996696 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 44343643 - 44343374
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       |||||||  ||||||||||||| | ||||    
T  44343643 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaa 44343544  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  44343543 tcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 44343444  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagatttta 286  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  44343443 ttttagcatgaaaaagtctttcacgaaaacatgagatttcttaggattgtttttttcttttaagatttta 44343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 30440756 - 30441028
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||        |||||| |||||||||||||| | ||||    
T  30440756 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaa 30440855  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30440856 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 30440955  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30440956 ttttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 12893368 - 12893639
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| ||||| |||||||| | ||||    
T  12893368 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaa 12893467  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12893468 tcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaa 12893567  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg---ttttttcttttaagatttta 286  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||    
T  12893568 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttttcttttaagatttta 12893639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 18914982 - 18914710
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| || ||| |||||| |||       ||||||| |||||||||||||| | ||||    
T  18914982 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaa 18914883  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18914882 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 18914783  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18914782 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 34695233 - 34695505
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| ||||||  |||||||||       || |||| |||||||||||||| | ||||    
T  34695233 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaa 34695332  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  || ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  34695333 tcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 34695432  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34695433 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 89 - 282
Target Start/End: Complemental strand, 7718538 - 7718345
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  7718538 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7718439  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagat 282  Q
    ||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7718438 gatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttttcttttaagat 7718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 47914258 - 47914498
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||| ||| |||||||||||||| | ||||||||||||||||  ||||||| |||| |||||    
T  47914258 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47914357  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  47914358 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 47914457  T
Q  250 gagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  47914458 gagatttcttaagattgtttttttcttttaagattttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 34008972 - 34009245
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||||||||||||||       ||||||| |||||||||||| | | ||||    
T  34008972 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaa 34009071  T
Q  118 tcacttaaaaaatatc-tagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    ||||||||||||  || |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| | ||    
T  34009072 tcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaa 34009171  T
Q  217 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34009172 attttagcataaaaaagtctttcaagaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 47879160 - 47879400
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||| ||| |||||||||||||| | ||||||||||||||||  ||||||| |||| |||||    
T  47879160 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47879259  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||    
T  47879260 cattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 47879359  T
Q  250 gagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  47879360 gagatttcttaagattgtttttttcttttaagattttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 39219552 - 39219352
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||||  ||||||||||||| | ||||||||||||||||  |||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  39219552 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttga-tgattgtttaataaatcagatttt 39219454  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttac 287  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||    
T  39219453 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 39219354  T
Q  288 ta 289  Q
    ||    
T  39219353 ta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 55 - 289
Target Start/End: Complemental strand, 20275473 - 20275238
Alignment:
Q  55 ttattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattc 154  Q
    ||||||||| ||||||  |||||||||       ||||| | |||||||||||||| | ||||||||||||||||  |||  ||||||| ||||||||||    
T  20275473 ttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattc 20275374  T
Q  155 aaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagat 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| | |||||| ||||||||    
T  20275373 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagat 20275274  T
Q  255 ttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||| |||| |||||||||||||||||||||||    
T  20275273 ttcttagcattgtttttttcttttaagattttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 97 - 288
Target Start/End: Original strand, 10068499 - 10068689
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||||||||    
T  10068499 gtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggatt 10068598  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||||  |||||||||||||||||||||||||||||||| ||| || |||||||||||||| ||||||||| |||||||||||| ||||||||    
T  10068599 ttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattg-tttttcttttaaaattttact 10068689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 32143166 - 32142895
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    |||||||||||||||| |||||       || |||| ||||||||||||  || ||||||||||       ||||| | ||||| |||||||| | ||||    
T  32143166 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaa 32143067  T
Q  118 tcacttaaaaaata--tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtga 215  Q
    |||||| ||||| |  ||  |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  32143066 tcacttcaaaaaaaagtcacgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtga 32142967  T
Q  216 aattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagatttta 286  Q
    ||||||||||||||||||||||  || |||||||||||||||||| ||||||| ||||||||||||||||||    
T  32142966 aattttagcatgaaaaagtcttccataaaaacatgagatttcttaagattgtttttttcttttaagatttta 32142895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 7113416 - 7113684
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||| ||||||       || |||| |||||||||    | ||||||    
T  7113416 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaa 7113511  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  || ||||||||| ||||| |||||||||||| | |||||||||||||||||||||||||| ||||||||  ||||||||||  |||    
T  7113512 tcacttaaaaaaagtccagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaa 7113611  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  7113612 ttttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaggattttacta 7113684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 3022958 - 3023132
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  3022958 gtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 3023057  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||| ||| ||||||| ||||||||||||  ||||||||||    
T  3023058 ttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattgttttt 3023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 98 - 289
Target Start/End: Original strand, 12963734 - 12963919
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    |||||||||||||||||| || ||||||||||  ||| |||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  12963734 tattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattt 12963833  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||  ||||||||||||||||||||| | ||||||||||||| |     |||||||||||||  ||||| |||||||||||| |||||||||    
T  12963834 tgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----catgagatttcttgagattg-tttttcttttaaaattttacta 12963919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 23101330 - 23101504
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  23101330 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 23101429  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  23101430 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 23101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 43679470 - 43679592
Alignment:
Q  114 ttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagt 213  Q
    ||||||||||||||||  || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  43679470 ttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagt 43679569  T
Q  214 gaaattttagcatgaaaaagtct 236  Q
    |||||||||||||||||||||||    
T  43679570 gaaattttagcatgaaaaagtct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 271
Target Start/End: Complemental strand, 9882454 - 9882231
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||| | ||||||||||       ||||||  |||||||||||||| |||| |||||||||||||  ||| |||||||| ||    
T  9882454 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 9882355  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||| ||||| |||||||  | |||||||||||| || ||||    
T  9882354 aatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaa 9882256  T
Q  247 catgagatttcttaggattgttttt 271  Q
     ||||||||||||  ||||||||||    
T  9882255 aatgagatttcttgagattgttttt 9882231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 97 - 284
Target Start/End: Original strand, 33382669 - 33382855
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  |||  ||||||| ||||||||| |||||||||| |||||||||||||||  ||||||||||||||    
T  33382669 gtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 33382768  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattt 284  Q
    ||||  |||||| ||||| ||||||| || |||||||||||||||||||| ||||||||| ||  ||||| |||||||||||| ||||    
T  33382769 ttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttatttagattg-tttttcttttaaaattt 33382855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 8675365 - 8675539
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||| ||| |||||| |||||||||||||||  ||||||||||||||    
T  8675365 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggatt 8675464  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  8675465 ttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgagattgttttt 8675539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 18838421 - 18838595
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| ||| |||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  18838421 gtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggatt 18838520  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||| ||| ||||||| ||||||||||||  ||||||||||    
T  18838521 ttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgttttt 18838595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 28342379 - 28342553
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||| ||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  28342379 gtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 28342478  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  28342479 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 28342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 39784131 - 39784305
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| ||||||||| |||||||||| |||||||||||||||  ||||||||||||||    
T  39784131 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 39784230  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  39784231 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 39784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 97 - 284
Target Start/End: Complemental strand, 3797225 - 3797049
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| || |||||| |||||| ||| ||||||||||||||| ||||||||||||       
T  3797225 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttgatgg--- 3797129  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattt 284  Q
          |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| ||||    
T  3797128 ------gattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattg-tttttcttttaaaattt 3797049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 259
Target Start/End: Complemental strand, 29614932 - 29614770
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| ||| |||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  29614932 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 29614833  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  29614832 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 98 - 271
Target Start/End: Complemental strand, 28034972 - 28034799
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||||| |||| |||||||||||||  ||| |||||||| ||||| ||||||||||| || |||||||||||||||  |||||||||||||||    
T  28034972 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattt 28034873  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||  |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||||||||  ||||||||||    
T  28034872 tgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 28034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 270
Target Start/End: Original strand, 12740364 - 12740577
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||  ||||| ||||||||||||| |||| ||||||||  ||| |||||||| |||||||||||    
T  12740364 tattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattca 12740463  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    |||||| || |||||||||||||||  ||||||||| ||||||||  |||||| ||||| ||||||| || || ||||||||| || |||| ||||||||    
T  12740464 aatttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatt 12740562  T
Q  256 tcttaggattgtttt 270  Q
    ||||| |||||||||    
T  12740563 tcttaagattgtttt 12740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 117 - 289
Target Start/End: Complemental strand, 43187505 - 43187334
Alignment:
Q  117 atcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    |||||||||||||  |||  ||||||| |||||||||||||||| |||  ||||||||||||||  |||||||||| |||||||  ||||||||||||||    
T  43187505 atcacttaaaaaaagtctcatggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaa 43187406  T
Q  217 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||||| || |||||||||||| ||||| ||||||||||| || ||||||| ||||||||||| | |||||||    
T  43187405 attttaacaagaaaaagtctttcatgaagacatgagattttttgggattgt-ttttcttttaaaagtttacta 43187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 7993174 - 7993348
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| | |||| |||||||||||||  |||  ||||||| |||||||||||||||||||| |||||||||||||||   |||||||||||||    
T  7993174 gtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 7993273  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
     |||  |||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||||  ||||||||||    
T  7993274 gtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattgttttt 7993348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 9179864 - 9180076
Alignment:
Q  49 tttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaa 148  Q
    |||||| |||||||| |||||| ||||||||||       || |||| |||||||||||||| | || |||||||||||||  ||| |||||||  ||||    
T  9179864 tttgtaatattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaa 9179963  T
Q  149 tcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 248  Q
    ||| | ||||| |||| |||||||||||||||          ||||||||||  |||||||||||||| ||||||||| ||||||||||| |||||||||    
T  9179964 tcacttaaattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaaca 9180053  T
Q  249 tgagatttcttaggattgttttt 271  Q
    |||||||||||||||||||||||    
T  9180054 tgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 44256934 - 44256760
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  | | |||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||| |||    
T  44256934 gtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaatt 44256835  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||| ||||||  |||| ||||||| || |||||||| ||| || |||| ||||||||| ||  ||||||||||    
T  44256834 ttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttgagattgttttt 44256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 44122068 - 44121904
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  44122068 gtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 44121969  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||  ||||||||||    
T  44121968 ttg----------tagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgagattgttttt 44121904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 271
Target Start/End: Complemental strand, 40460874 - 40460711
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40460874 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattt 40460775  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||          ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  40460774 tg----------tagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgttttt 40460711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 31638914 - 31639015
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||| ||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31638914 gtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 31639013  T
Q  197 tt 198  Q
    ||    
T  31639014 tt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 271
Target Start/End: Original strand, 509647 - 509852
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||| ||||||||||||       ||||||  |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||    
T  509647 tattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattca 509746  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    ||||||||| |||||||||||||||  |||||||||||||||||          |||||  |||||| || |||||||||||| ||||||| ||||||||    
T  509747 aatttcgaacgattgtttaataaattggattttgatggattttg----------tagtgggattttaacaagaaaaagtctttcatgaaaagatgagatt 509836  T
Q  256 tcttaggattgttttt 271  Q
    ||||  ||||||||||    
T  509837 tcttgagattgttttt 509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 19251571 - 19251734
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| |||||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||          ||||||    
T  19251571 gtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggatt 19251660  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttt 270  Q
    ||| | |||||||| ||||||||||||||  ||||||||||| |||||||| ||| ||||||| ||||| ||||    
T  19251661 ttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggattatttt 19251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 25805724 - 25805862
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| |||||| ||||||||||||| |  | |||||||| |||||||||||||||||| | |||||||||||||||   ||| |||||||||    
T  25805724 gtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggatt 25805823  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtc 235  Q
    ||||  ||||||||| | |||||||||||||||||||||    
T  25805824 ttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 32883806 - 32883948
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||| |||||||||| |||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||| |||||  ||||||    
T  32883806 gtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggatttt 32883905  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaa 231  Q
    ||||||||| ||  |||||| ||||| ||||||| || |||||    
T  32883906 gatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 727472 - 727692
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| || ||| ||||||||||       |||||||  ||||||||||| | | || |    
T  727472 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactcttta 727571  T
Q  118 tcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    |||||||||||| | |||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| |||         ||||||||||||||    
T  727572 tcacttaaaaaaaaatctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttg-tgg---------gattttctagtgaa 727661  T
Q  217 attttagcatgaaaaagtcttttatgaaaac 247  Q
    |||||||||||||||||||||| ||||||||    
T  727662 attttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 46405599 - 46405496
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  46405599 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggatt 46405500  T
Q  197 ttgt 200  Q
    ||||    
T  46405499 ttgt 46405496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 89 - 222
Target Start/End: Complemental strand, 10676596 - 10676463
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| |||| |||||||||||||  |||  | ||||| |||||||||||||||||||| |||||||||||||||  |||||     
T  10676596 gtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttg 10676497  T
Q  189 gatggattttgttagattttctagtgaaatttta 222  Q
    |||||||||| |   ||||||| |||||||||||    
T  10676496 gatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 19810874 - 19810995
Alignment:
Q  140 tatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtctttt 239  Q
    |||| ||||||||||||||||| ||||||||||||||||||          ||||||||||   ||||||||||||||||||||||| |||| ||||||     
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  240 atgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||||||||||||||||  ||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttt 19810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 37972981 - 37972861
Alignment:
Q  151 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatg 250  Q
    |||||||||||||| |||| ||||||||||  |||||||||||||||||   |||||| ||||| ||||||| || |||||||||||| ||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  251 agatttcttaggattgttttt 271  Q
    ||| |||||  ||||||||||    
T  37972881 agacttcttgagattgttttt 37972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 33892418 - 33892315
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||| ||  ||| |||||||| |||||||||||||||||||||||||||| |||||||  |||||| ||| |||    
T  33892418 gtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaatt 33892319  T
Q  197 ttgt 200  Q
    ||||    
T  33892318 ttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 37327959 - 37328062
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| || ||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||   |||||||||||||    
T  37327959 gtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggatt 37328058  T
Q  197 ttgt 200  Q
    ||||    
T  37328059 ttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 39028130 - 39028232
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||||| |||| |||||||||||||  ||| ||| |||| |||||| |||||||| |||| |||||||||||||||  |||||||||||||||    
T  39028130 tattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattt 39028229  T
Q  198 tgt 200  Q
    |||    
T  39028230 tgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 287
Target Start/End: Complemental strand, 1470362 - 1470213
Alignment:
Q  136 gtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtc 235  Q
    |||||||| |||||| |||||||||  ||  |||||||||| ||| |||||||||| | ||||||  ||||||||  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  236 ttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttac 287  Q
    |||| |||||||  |||||||| ||| |||| |||||||||||||||||||||    
T  1470263 ttttttgaaaac--gagatttcctagcattgtttttttcttttaagattttac 1470213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 17001191 - 17001099
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    ||||||||| |||| |||| ||||||||||||| || | |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  17001191 gtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 271
Target Start/End: Original strand, 29585497 - 29585710
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||||| ||||||||||       ||||||  |||||||||||| | ||||| ||||||||||||  |||  ||||||| ||    
T  29585497 gttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttta-tcacttaaaaaaagtcttctggtattcaa 29585595  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    |||||||||||||| ||| ||||||||||||| |  ||||||||||||||||||          |||| ||||||| || |||||||||||| || ||||    
T  29585596 aatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcataaaaa 29585685  T
Q  247 catgagatttcttaggattgttttt 271  Q
     |||| |||||||  ||||||||||    
T  29585686 gatgaaatttcttgagattgttttt 29585710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 41827390 - 41827510
Alignment:
Q  151 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatg 250  Q
    ||||||| || ||| |||||||||||||||  ||||||||||||||||||  |||| | ||||| ||||||| || ||||| |||||| ||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  251 agatttcttaggattgttttt 271  Q
    |||||||||  ||||||||||    
T  41827490 agatttcttgagattgttttt 41827510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  136 gtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggat 195  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 10617024 - 10617141
Alignment:
Q  171 tttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat-gagatttcttaggattgttt 269  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |  || |||||||| || |||||||  |||||| || ||||||  |    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattg-ct 10617122  T
Q  270 tttcttttaagattttact 288  Q
    |||||||||| ||||||||    
T  10617123 tttcttttaaaattttact 10617141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 47066735 - 47066828
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||| |  ||| ||||||||||||| | ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  47066735 gtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 31639032 - 31639082
Alignment:
Q  240 atgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  31639032 atgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 31639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 29893113 - 29893177
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttc 161  Q
    |||||||||||||| |||| |||||||||||||  ||| || ||||||||||| |||||||||||    
T  29893113 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 10616903 - 10617012
Alignment:
Q  19 aatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaat 118  Q
    |||||||||||||| ||||||       |||||||| |||||||||| |||||||||||||||       ||||||  |||||| |||||||||||  ||    
T  10616903 aatcaagactctttgcaatttaaaaaaagttttgtaatattcaataa-gattatttgtcatttttaaaaagtcttgaggtattcgatcaagattttccat 10617001  T
Q  119 cacttaaaaaa 129  Q
    |||||||||||    
T  10617002 cacttaaaaaa 10617012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 236
Target Start/End: Complemental strand, 44623452 - 44623315
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| ||||| |||||||| | || ||||||| |||||  ||| ||| |||| ||||||||||| ||||| || || ||||||||||||            
T  44623452 gtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat-------- 44623361  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtct 236  Q
      || |||||||   |||||||||||||||||||| ||||||||||||    
T  44623360 --tgaattttgtggaattttctagtgaaattttagaatgaaaaagtct 44623315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 43863479 - 43863525
Alignment:
Q  240 atgaaaacatgagatttcttaggattgttttttcttttaagatttta 286  Q
    ||||||||||||||||||| || |||||| |||| ||||||||||||    
T  43863479 atgaaaacatgagatttctgagaattgttatttcatttaagatttta 43863525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 45276312 - 45276350
Alignment:
Q  247 catgagatttcttaggattgttttttcttttaagatttt 285  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  45276312 catgagatttcataggattgttatttcttttaagatttt 45276350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 6197725 - 6197453
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  6197725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 6197626  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6197625 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 6197526  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6197525 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 1391582 - 1391854
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| ||||||  |||||||||       ||||||| |||||||||||||| | ||||    
T  1391582 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaa 1391681  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1391682 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 1391781  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttc-ttttaagattttacta 289  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1391782 ttttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttctttttaagattttacta 1391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 2300985 - 2300714
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | || |    
T  2300985 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttga 2300886  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||| ||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  2300885 tcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaa 2300786  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  2300785 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatttttttttcttttaaaattttacta 2300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 28002623 - 28002895
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||| | |||||||||||||| | ||||    
T  28002623 caatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaa 28002722  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  ||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  28002723 tcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaa 28002822  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||||| |||||||||||||||||||||||    
T  28002823 ttttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttttcttttaagattttacta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 29076556 - 29076811
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||| ||||| ||||    
T  29076556 caatcaagactctttccaatttaaataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaa 29076655  T
Q  118 tcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    |||||||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  29076656 tcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaa 29076755  T
Q  217 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt 272  Q
    |||||||||||||||| ||||| || |||||||||||||| |||||||||||||||    
T  29076756 attttagcatgaaaaaatctttcataaaaacatgagattttttaggattgtttttt 29076811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 29111529 - 29111785
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||| ||||| ||||    
T  29111529 caatcaagactctttccaatttaaataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaa 29111628  T
Q  118 tcacttaaaaaata--tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtga 215  Q
    |||||||||||| |  |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  29111629 tcacttaaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtga 29111728  T
Q  216 aattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt 272  Q
    ||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||    
T  29111729 aattttagcatgaaaaaatctttcataaaaacatgagattttttaggattgtttttt 29111785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 89 - 271
Target Start/End: Original strand, 31895725 - 31895907
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||| ||||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||    
T  31895725 gtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 31895824  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||||||||  |||||||||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  31895825 gatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 31895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 282
Target Start/End: Original strand, 7051874 - 7052067
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||| ||||||||| | || |||||||||||||  ||  ||| |||| |||||||||||||||||||| |||||||||||||||  ||||||    
T  7051874 gtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 7051973  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagat 282  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||| ||| || ||| ||||||||||||||| ||||||||| || |||||||    
T  7051974 gatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttcttagaattgtttttcctgttaagat 7052067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 89 - 259
Target Start/End: Original strand, 7497105 - 7497274
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| ||||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||||||||| || ||||||||||||  ||||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggatttt 7497204  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||||||||| | |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  7497205 gatggattttg-tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 14262601 - 14262427
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| |||||||||| |||||||||||||||  ||||||||||||||    
T  14262601 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 14262502  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||| ||||||||  ||||||||||    
T  14262501 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttcttgagattgttttt 14262427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 259
Target Start/End: Complemental strand, 34759226 - 34759056
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||| ||||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||  ||||||    
T  34759226 gtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggatttt 34759127  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||||||||||  |||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||    
T  34759126 gatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 259
Target Start/End: Original strand, 34773446 - 34773608
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| |||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  34773446 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 34773545  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||  ||||||  |||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  34773546 ttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 30385225 - 30385063
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| | |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||          ||||||    
T  30385225 gtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggatt 30385136  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| ||  | ||||||||| ||||||| ||||||||||||  ||||||||||    
T  30385135 ttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttcttgagattgttttt 30385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 271
Target Start/End: Original strand, 31067569 - 31067694
Alignment:
Q  136 gtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtc 235  Q
    |||||||| |||||||||||||||||||| |||||||||||||||          ||||||||||  |||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  236 ttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||| || |||| ||||||||||||  ||||||||||    
T  31067659 tttcataaaaagatgagatttcttgagattgttttt 31067694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 2238668 - 2238741
Alignment:
Q  217 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg--ttttttcttttaagattttact 288  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattgttttttttcttttaagattttact 2238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 4200541 - 4200431
Alignment:
Q  151 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatg 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||||| ||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  251 agatttcttaggattgttttt 271  Q
    |||||||||  ||||||||||    
T  4200451 agatttcttgagattgttttt 4200431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 656994 - 657065
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaattt 160  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||||  |||||||||||||||    
T  656994 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 657116 - 657165
Alignment:
Q  240 atgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  657116 atgaaaacatgaaatttcttaggattgttttttcttttaaaattttacta 657165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 3848267 - 3848330
Alignment:
Q  117 atcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaat 180  Q
    |||||||||||||  | | |||||||| ||||||||| |||||| |||||||||||||||||||    
T  3848267 atcacttaaaaaaagttttgtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  225 atgaaaaagtcttttatgaaaacatgagatttcttaggatt 265  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 5e-87; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 21147026 - 21147294
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  21147026 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 21147125  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  21147126 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 21147225  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttta 286  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  21147226 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttaagatttta 21147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 33656217 - 33656017
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33656217 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 33656118  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33656117 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttcttttaagattttact 33656018  T
Q  289 a 289  Q
    |    
T  33656017 a 33656017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 7016915 - 7016714
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||||||||||||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  7016915 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7016816  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttac 287  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| |||||||||||||||||||||    
T  7016815 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttac 7016716  T
Q  288 ta 289  Q
    ||    
T  7016715 ta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 27459196 - 27458925
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       |||||||||||||||||||||| | ||||    
T  27459196 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaa 27459097  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  27459096 tcacttaaaaaag-tctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaa 27458998  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||| || || |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  27458997 ttttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 18 - 288
Target Start/End: Original strand, 139232 - 139504
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       ||||||| ||||||||| |||||| ||||||||||       ||| ||| |||||||||||||| ||||||    
T  139232 caatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaa 139331  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  139332 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaa 139431  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggat--tgttttttcttttaagattttact 288  Q
    |||||  |||||||||||||| || ||||||||||||||||||  ||  | ||||||||||||||||||||||    
T  139432 ttttaatatgaaaaagtctttcataaaaacatgagatttcttaaaattattttttttcttttaagattttact 139504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 56 - 289
Target Start/End: Complemental strand, 5273128 - 5272894
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||| | |||||||||||||| | ||||||| ||||||||  |||||||||||| |||||||||||    
T  5273128 tattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattca 5273029  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  5273028 aatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatt 5272929  T
Q  256 tcttaggattgtttttt-cttttaagattttacta 289  Q
    |||||   ||||||||| ||||||| |||||||||    
T  5272928 tcttaattttgttttttacttttaaaattttacta 5272894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 32158113 - 32157869
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaa 148  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| ||||||||||||||    ||||||||||||||| | |||||||||||| ||||    
T  32158113 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaa 32158014  T
Q  149 tcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaa---agtcttttatgaaa 245  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||||||||  ||||||||||| ||||||||||| |||||   ||||||| ||||||    
T  32158013 tcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaa 32157914  T
Q  246 acatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    |||||||||||||||  |||||| |||||||||||||||||||||    
T  32157913 acatgagatttcttaaaattgttcttttcttttaagattttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 849177 - 849334
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  849177 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 849276  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    ||| ||||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  849277 gatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 97 - 286
Target Start/End: Original strand, 9689696 - 9689884
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| | || |||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  9689696 gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggatt 9689794  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttta 286  Q
     ||| ||||||||| || ||||||||  |||||||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||    
T  9689795 gtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattgttttttcttttaagatttta 9689884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 1152271 - 1152097
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||  |||||||||||||||  ||||||||||||||    
T  1152271 gtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggatt 1152172  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  1152171 ttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattgttttt 1152097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 232
Target Start/End: Original strand, 6460788 - 6460965
Alignment:
Q  55 ttattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattc 154  Q
    ||||||||| |||||| ||||||||||       ||| ||| |||||||||||||| | ||||||| |||||||| ||||||||||||| ||||||||||    
T  6460788 ttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattc 6460887  T
Q  155 aaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaa 232  Q
    |||||||||| | ||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||    
T  6460888 aaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 271
Target Start/End: Original strand, 13925919 - 13926143
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||| | ||||||||||       ||||||  ||||||||||||||||||| || ||||||||||  ||| |||||||| ||    
T  13925919 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaa 13926018  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||  |||||| ||||| ||||||| || |||||||||||| | |||||    
T  13926019 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaa 13926118  T
Q  247 catgagatttcttaggattgttttt 271  Q
     |||| |||||||  ||||||||||    
T  13926119 gatgatatttcttgagattgttttt 13926143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 14000273 - 14000099
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  14000273 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 14000174  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  14000173 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 97 - 277
Target Start/End: Complemental strand, 4550425 - 4550245
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  4550425 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 4550326  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttctttt 277  Q
    ||||   ||||| ||||| ||||||| || |||| ||||||| ||||||| ||||||||| ||  ||||||||||| ||||    
T  4550325 ttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgttgagattgttttttttttt 4550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 39852383 - 39852557
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| || | |||| ||||||||  ||| |||||||| |||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  39852383 gtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggatt 39852482  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    || |  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  39852483 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 39852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 259
Target Start/End: Complemental strand, 7947741 - 7947579
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| | | |||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  7947741 gtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 7947642  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||   ||||| ||||| ||||||| || |||||||||||| ||||||| | ||||||||||    
T  7947641 ttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 5949147 - 5949310
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| |||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  5949147 gtattcaatcaaaatttttcatcacttaaaaaa-atcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 5949245  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  5949246 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 5949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 4240620 - 4240456
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  4240620 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 4240521  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||| | ||||||||||||  ||||||||||    
T  4240520 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgagattgttttt 4240456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 14465395 - 14465266
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| | || ||| |||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||    
T  14465395 gtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaatt 14465296  T
Q  197 ttgttagattttctagtgaaattttagcat 226  Q
    ||||   |||||||||| | ||||||||||    
T  14465295 ttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 40013870 - 40013706
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| |||||||| |||| ||| |||| |||||||||||||||||||| ||||||||||| |||  |||||| |||||||    
T  40013870 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggatt 40013771  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  40013770 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 40013706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 286
Target Start/End: Complemental strand, 9220883 - 9220696
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||||  ||||||||||||| | || |||||||||||||  |||  || |||| ||||||||||||||||| || ||||||||||| ||| ||| |||    
T  9220883 gtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaattt 9220784  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttta 286  Q
    |  ||||||| |          ||| |||||||| || ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  9220783 gtaggattttat----------agtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattgttttttcttttaagatttta 9220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 22746335 - 22746501
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| | |||| |||||||||||||  ||| ||| |||| ||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  22746335 gtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggatt 22746434  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  ||        || ||||||| || |||||| ||||| ||||||| || |||||||||| ||||||||||    
T  22746435 ttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 1461306 - 1461203
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| | | |||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  1461306 gtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 1461207  T
Q  197 ttgt 200  Q
    ||||    
T  1461206 ttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 37013952 - 37014044
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||| |||| |||||||||||||  ||| | |||||| |||||||||||||||||||| | |||||||||||||  |||||||    
T  37013952 gtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 1511387 - 1511330
Alignment:
Q  228 aaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttt 285  Q
    ||||| |||||||||||||||| |||||| ||||||||||| |||||||||| |||||    
T  1511387 aaaaaatcttttatgaaaacataagattttttaggattgttatttcttttaaaatttt 1511330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 16894078 - 16894026
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggta 141  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||    
T  16894078 gtcttgtggtattcaatcaagactcttaatcacttaaaaaatgtctagtggta 16894026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 3e-85; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 42938364 - 42938095
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||||||||||||||       ||||||| |||||||||||||| | ||||    
T  42938364 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 42938265  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  42938264 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 42938165  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagatttta 286  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42938164 ttttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatttta 42938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 2705066 - 2704794
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||| ||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  2705066 caatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 2704967  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| |    
T  2704966 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgata 2704867  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2704866 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 5576868 - 5576595
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  5576868 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 5576769  T
Q  118 tcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    |||||||||||| | || ||||||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  5576768 tcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaa 5576669  T
Q  217 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt-cttttaagattttacta 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5576668 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttccttttaagattttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 24502028 - 24501788
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||| ||||||       ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24501929  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  24501928 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24501829  T
Q  250 gagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24501828 gagatttcttaggattgtttttttcttttaagattttacta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 26374645 - 26374405
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||    
T  26374645 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 26374546  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  26374545 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 26374446  T
Q  250 gagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  26374445 gagatttcttaggattgtttttttcttttaaaattttacta 26374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 7507146 - 7506874
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||         ||||| |||||||||  |||||  |||||||||       ||||||| |||||||||||||| | ||||    
T  7507146 caatcaagactctttccaatttaaaaaaaagtttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaa 7507047  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  7507046 tcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 7506947  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7506946 ttttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagattttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 282
Target Start/End: Complemental strand, 23115415 - 23115152
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  23115415 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaa 23115316  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  23115315 tcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaa 23115217  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagat 282  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  23115216 ttttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttcttttaagat 23115152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 42735524 - 42735252
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||| ||||||       | ||||| ||||||||| |||| | ||||    
T  42735524 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaa 42735425  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  42735424 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 42735325  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  42735324 ttttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 42937344 - 42937582
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| ||||||||||  || | ||||||||||||||||  |||||||||||| |||||    
T  42937344 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaat 42937441  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  42937442 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacat 42937541  T
Q  250 gagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  42937542 gagatttcttatgattgtttttttcttttaagattttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 55 - 285
Target Start/End: Complemental strand, 10392447 - 10392217
Alignment:
Q  55 ttattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattc 154  Q
    ||||||||| |||||| ||||||||||        ||||||  ||||||||||||| |||||||||||||| |||  |||||||||||| | ||||||||    
T  10392447 ttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattc 10392348  T
Q  155 aaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagat 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  10392347 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagat 10392248  T
Q  255 ttcttaggattgttttttcttttaagatttt 285  Q
    || |||||||| |||||||||||||||||||    
T  10392247 ttattaggatttttttttcttttaagatttt 10392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 41479056 - 41479318
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       ||||||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  41479056 caatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 41479155  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||         ||||||||||| |||    
T  41479156 tcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg-tgg---------gattttctagtaaaa 41479245  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41479246 ttttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 41479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 43959617 - 43959878
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||||| ||||    
T  43959617 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgt-gtattcaatcaagattcttaa 43959715  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||| |||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||          | ||||||    
T  43959716 tcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttg----------tggtgaaa 43959805  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  43959806 ttttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgtttttttcttttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 90 - 271
Target Start/End: Original strand, 4403138 - 4403319
Alignment:
Q  90 tcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    ||||| |||||||||| ||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||  | |||||    
T  4403138 tcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttg 4403237  T
Q  190 atggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||||||  |||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||||| |||||||||||    
T  4403238 atggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgggattgttttt 4403319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 10295549 - 10295366
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgga-t 195  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||| |    
T  10295549 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 10295450  T
Q  196 tttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaa 279  Q
    |||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||| ||||||    
T  10295449 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttttttttaa 10295366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 9288625 - 9288451
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| | |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||| |||    
T  9288625 gtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatt 9288526  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  9288525 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 9288451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 14782303 - 14782129
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  14782303 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 14782204  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  14782203 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 19718049 - 19717875
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| ||||||||||||||||||||  ||||||||||||||  |||||| |||||||    
T  19718049 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggatt 19717950  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  19717949 ttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttgagattgttttt 19717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 44725978 - 44725804
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  44725978 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 44725879  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  44725878 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 44725804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 18958895 - 18958721
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||| |||||||    
T  18958895 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggatt 18958796  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| || |||||| ||  ||||||||||    
T  18958795 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattttttgagattgttttt 18958721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 26856105 - 26856279
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  26856105 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggatt 26856204  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| |  |||| || |||||||||  ||||||||||    
T  26856205 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttcttgagattgttttt 26856279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 92 - 286
Target Start/End: Complemental strand, 4950188 - 4949995
Alignment:
Q  92 ttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgat 191  Q
    |||| |||||||||||| | ||||  ||| ||||||||  ||| | |||||| |||||||||||| |||| || |||| |||||||||| ||||||||||    
T  4950188 ttgtggtattcaatcaaaaattttcctcatttaaaaaag-tcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgat 4950090  T
Q  192 ggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttta 286  Q
    ||| |||||   ||||||||||||||||||||||||||||| | ||| ||| |||||| ||||||||||  ||||||||||||||||| ||||||    
T  4950089 ggaatttgtggaattttctagtgaaattttagcatgaaaaaatatttcatgcaaacataagatttcttaaaattgttttttcttttaaaatttta 4949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 39467636 - 39467462
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||   |||||||||||||    
T  39467636 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 39467537  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    || |  |||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||| ||  ||||||||||    
T  39467536 ttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttttgagattgttttt 39467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 32711529 - 32711358
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  32711529 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 32711430  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    ||||||||||||  |||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||    
T  32711429 tcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 259
Target Start/End: Complemental strand, 43166866 - 43166696
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||  ||| || |||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||    
T  43166866 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 43166767  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||||||||||  |||||| | ||| ||||||| || |||||||| ||| ||||||| ||||||||||||    
T  43166766 gatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 32497563 - 32497727
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||          ||||||    
T  32497563 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggatt 32497652  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || || ||||||||| ||||||| ||||||||||||  ||||||||||    
T  32497653 ttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgttttt 32497727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 16362234 - 16362398
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| || ||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  16362234 gtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 16362333  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||| |||||||| |||| ||||||||||||  ||||||||||    
T  16362334 ttg----------tagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgagattgttttt 16362398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 289
Target Start/End: Complemental strand, 39189940 - 39189793
Alignment:
Q  139 gtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttt 238  Q
    ||||| || ||||||||||||||||| |||||||||||||||  || |||||||||||||| |  |||||||||| |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  239 tatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
     |||||||||||||||||||| ||||||| ||||||||||| | |||||||    
T  39189842 catgaaaacatgagatttcttgggattgt-ttttcttttaaaagtttacta 39189793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 268
Target Start/End: Complemental strand, 18306129 - 18305968
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||          ||||||    
T  18306129 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggatt 18306040  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt 268  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  |||||||    
T  18306039 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 18305968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 139 - 289
Target Start/End: Complemental strand, 13478376 - 13478226
Alignment:
Q  139 gtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttt 238  Q
    ||||| |||||| || |||||||||| ||||||||||||||| |||||| | ||||||||||  |||||| |||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  239 tatg-aaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    |||| ||||||| |||||| |||  | | |||||||||||||||||||||||    
T  13478276 tatgaaaaacataagattttttataact-ttttttcttttaagattttacta 13478226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 7466373 - 7466537
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| ||| |||||||||  ||| |||||||| |||||||||||||||| |||  ||||||||||||||          ||||||    
T  7466373 gtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat----------tggatt 7466462  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  7466463 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 7466537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 42305953 - 42305789
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| |||||||| |||| |||||||| ||||| |||||||||||||| ||||||||||| |||  |||||| |||||||    
T  42305953 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggatt 42305854  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || ||||||||| || ||||||| ||||||||||||  ||||||||||    
T  42305853 ttg----------tagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttcttgagattgttttt 42305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 31623733 - 31623825
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  31623733 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 37857157 - 37857321
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||| ||||||||| |||||||||||||  ||| |||||||| ||| ||||||||||||  || |||||||||||||||  ||||||||||||||    
T  37857157 gtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggatt 37857256  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||          |||| ||||| | || |||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  37857257 ttgt----------agtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 37857321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 4031426 - 4031334
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||| |||| || | ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  4031426 gtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 8410526 - 8410423
Alignment:
Q  137 tggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttaga--ttttctagtgaaattttagcatgaaaaagt 234  Q
    ||||||| ||||||||| |||||| ||| ||||||||| |||||  || |||||||||||||||  ||  |||| |||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  235 cttt 238  Q
    ||||    
T  8410426 cttt 8410423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 9770502 - 9770434
Alignment:
Q  203 gattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||||| |||||||||| ||| ||||| | ||| || |||||||||||||||||||||||| ||||    
T  9770502 gattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattgctttt 9770434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 41070010 - 41070066
Alignment:
Q  124 aaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaat 180  Q
    |||||| |||| ||||||||||||||||||| |||||| ||||||||||| ||||||    
T  41070010 aaaaaaaatcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaat 41070066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 32711346 - 32711305
Alignment:
Q  213 tgaaattttagcatgaaaaagtcttttatgaaaacatgagat 254  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  32711346 tgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 14028294 - 14028248
Alignment:
Q  243 aaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  14028294 aaaacatgatatttctttggattgttatttattttaagattttacta 14028248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 25331089 - 25331361
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  25331089 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 25331188  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  25331189 tcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 25331288  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25331289 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 41881331 - 41881056
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  41881331 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 41881232  T
Q  118 tcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    |||||||||||| | | |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41881231 tcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaa 41881132  T
Q  217 attttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt---ttttcttttaagattttacta 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  41881131 attttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttttcttttaagattttacta 41881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 53275829 - 53276069
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  53275829 ttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaat 53275928  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtctttta-tgaaaaca 248  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| | | |||||     
T  53275929 cattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaaact 53276028  T
Q  249 tgagatttcttaggattgttttttcttttaagattttacta 289  Q
    | |||||| ||||||||||||||||||||||||||||||||    
T  53276029 ttagattttttaggattgttttttcttttaagattttacta 53276069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 55 - 289
Target Start/End: Complemental strand, 34228794 - 34228559
Alignment:
Q  55 ttattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattc 154  Q
    ||||||||| |||||| ||||||||||       ||| ||| |||||||||||| ||| ||||||||||||||||  |||||||||||| |||||||||     
T  34228794 ttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattg 34228695  T
Q  155 aaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagat 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34228694 aaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 34228595  T
Q  255 ttcttaggattgtt-ttttcttttaagattttacta 289  Q
    |||||| ||||||| |||||||||||||||||||||    
T  34228594 ttcttaagattgtttttttcttttaagattttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 1112851 - 1113121
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||| ||||       || |||||||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  1112851 caatcaagactctttccgatttaaaaaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 1112950  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||||| |||    
T  1112951 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaa 1113050  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  1113051 ttttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt-tcttaagatttaacta 1113121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 32951084 - 32950811
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||||||||||||||       ||| ||| |||||||||||||| | ||||    
T  32951084 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaa 32950985  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  32950984 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaa 32950885  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttagga--ttgttttttcttttaagattttacta 289  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||  || |||||||||||||||||||||||    
T  32950884 ttttagcatgaaaaattctttcatgaaaacatgagatttcttaagatttttttttttcttttaagattttacta 32950811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 22201973 - 22202245
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  22201973 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 22202072  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||| ||||||| || ||||||||||||||| | |||||||||||||||||  |||||||||||||||    
T  22202073 tcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaa 22202172  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||| |||||||||    
T  22202173 ttttagcatgaaaaagtctttcatgaaaacattagatttcttagcattgtttttttcttttaaaattttacta 22202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 37046700 - 37046425
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||| ||||||||||       || |||| |||||||||||||| | ||||    
T  37046700 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaa 37046601  T
Q  118 tcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtg-a 215  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||||| |    
T  37046600 tcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaa 37046501  T
Q  216 aattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg--ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  37046500 aattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttttcttttaagattttacta 37046425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 55302801 - 55303077
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| || |||||| |||||| ||||||||||       ||| ||| |||||||||||||| | ||||    
T  55302801 caatcaagactcttttcaatttaaaaaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaa 55302900  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  55302901 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaa 55303000  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-----ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||     |||||||||||||||||||||||    
T  55303001 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttgttttttttcttttaagattttacta 55303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 89 - 289
Target Start/End: Original strand, 42786713 - 42786913
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||| ||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatttt 42786812  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||||||||||||   ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42786813 gatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttttcttttaagattttact 42786912  T
Q  289 a 289  Q
    |    
T  42786913 a 42786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 89 - 287
Target Start/End: Original strand, 1044836 - 1045035
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||    
T  1044836 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagatttt 1044935  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttac 287  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  1044936 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttttcttttaagattttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 30009925 - 30009653
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||| ||| || ||| ||| ||||||       ||| ||| |||||||||||||| | ||||    
T  30009925 caatcaagactctttccaatttaaaaaaagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaa 30009826  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  30009825 tcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaa 30009726  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  30009725 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 12112935 - 12113176
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||| | | ||||||||||||||||  |||| ||||||| |||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaat 12113034  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12113035 cattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12113134  T
Q  250 gagatttcttaggattg-ttttttctttt-aagattttacta 289  Q
    |||||||||| |||||| ||||||||||| ||||||||||||    
T  12113135 gagatttcttgggattgtttttttcttttaaagattttacta 12113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 288
Target Start/End: Complemental strand, 39479605 - 39479332
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| ||||||  |||||||||       ||||||| |||||||||||||| | ||||    
T  39479605 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 39479506  T
Q  118 tcacttaaaaaatat--ctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtga 215  Q
    |||||||||||| |   || |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  39479505 tcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtga 39479406  T
Q  216 aattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttact 288  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  39479405 aattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattgtttttttcttttaagattttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 7007364 - 7007605
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| | ||||||||       ||| ||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||    
T  7007364 ttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7007463  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||  | ||| ||||||||||    
T  7007464 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacat 7007563  T
Q  250 gagatttcttaggattg--ttttttcttttaagattttacta 289  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  7007564 gagatttcttaagattgttttttttcttttaagattttacta 7007605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 24131220 - 24130957
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  24131220 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 24131121  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24131120 tcacttaaaaaaagtctagtggtatt----------caaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 24131031  T
Q  218 ttttagcatg-aaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||||| ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24131030 ttttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 24130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 103 - 287
Target Start/End: Original strand, 41320853 - 41321038
Alignment:
Q  103 aatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtta 202  Q
    |||||||| | ||||||| ||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||      
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T
Q  203 gattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttac 287  Q
    ||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||    
T  41320953 gatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 98 - 289
Target Start/End: Original strand, 3436631 - 3436823
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||||| | ||||||| |||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattt 3436730  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    |||  |||||| ||||||||||||| ||||||||||| ||| |||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  3436731 tgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttttcttttaagattttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 46635890 - 46635624
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||        | |||||||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  46635890 caatcaagactctttccaatttaaaaaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 46635791  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  | |||| ||||| |||||||||||||||||||| ||||||||||||||| |||||      ||||||||  |||||| ||||||||    
T  46635790 tcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaa 46635697  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  46635696 ttttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaaaattttacta 46635624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 28541656 - 28541874
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||| ||||||||||       |||| || |||||||||||||| | ||||    
T  28541656 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaa 28541755  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  28541756 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaa 28541855  T
Q  218 ttttagcatgaaaaagtct 236  Q
    |||||||||||||||||||    
T  28541856 ttttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 50 - 237
Target Start/End: Original strand, 25446041 - 25446227
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||||||||||||| |||||| ||||||||||        |||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||    
T  25446041 ttgtattattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 25446139  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtctt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  25446140 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 245
Target Start/End: Complemental strand, 19741156 - 19740929
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||| ||| ||||||| |||||| ||||||    
T  19741156 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaa 19741057  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  19741056 tcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaa 19740957  T
Q  218 ttttagcatgaaaaagtcttttatgaaa 245  Q
    ||||||| ||||||||||||| ||||||    
T  19740956 ttttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 105 - 288
Target Start/End: Complemental strand, 31314893 - 31314719
Alignment:
Q  105 tcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttaga 204  Q
    |||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||         ||    
T  31314893 tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg-tgg---------ga 31314804  T
Q  205 ttttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttact 288  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31314803 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 40537361 - 40537136
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||| | ||||||||||       ||||||| |||||||||||| | | |||||||||||||||||     |||||||| |||||    
T  40537361 ttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaat-----gtggtattcaaaat 40537267  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||          | ||||||||||||||||||||||||||| ||||||||||    
T  40537266 catttaaatttcgaatgattgtttaataaatctgattttgatggattttg----------tggtgaaattttagcatgaaaaagtctttcatgaaaacat 40537177  T
Q  250 gagatttcttagga-ttgttttttcttttaagattttacta 289  Q
    |||||||||||||| || |||||| ||||||||||||||||    
T  40537176 gagatttcttaggatttttttttttttttaagattttacta 40537136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 89 - 285
Target Start/End: Original strand, 9163105 - 9163292
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| ||||||||||||||||||| ||||| |||||||  ||| ||| |||| |||||||||||||||||||| ||||||||||||||| | |||||    
T  9163105 gtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaatttt 9163204  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttt 285  Q
    ||||||||||||   ||||||||||||||||||||||||||        | ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  9163205 gatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttcttatgattgtttttt-ttttaagatttt 9163292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 101 - 282
Target Start/End: Complemental strand, 27454244 - 27454061
Alignment:
Q  101 tcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttg 199  Q
    |||||||||||| ||||||||||| |||| | | |||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  27454244 tcaatcaagattcttaatcacttacaaaaaagtttagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttg 27454145  T
Q  200 ttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagat 282  Q
    |   |||||||||||||||||| |||||||||||||||| |||||||||| | |||| ||| ||||||| ||||||||||||||    
T  27454144 tggaattttctagtgaaattttggcatgaaaaagtctttcatgaaaacataatatttgttaagattgtttttttcttttaagat 27454061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 5441441 - 5441615
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  5441441 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 5441540  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  5441541 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 5441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 27768093 - 27768267
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  27768093 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 27768192  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  27768193 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 27768267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 37828571 - 37828397
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  37828571 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 37828472  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| |||||||  | |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  37828471 ttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 37828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 54341181 - 54341355
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  54341181 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 54341280  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  54341281 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 54341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 47 - 285
Target Start/End: Complemental strand, 39307472 - 39307234
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||||| |||| |||||       ||||||| |||||||||||||||| || |||| ||||||||  ||| |||||||| |     
T  39307472 gttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcat 39307373  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    ||||||||||||||| || |||| |||||| |||    |||||||| |||||||  |||||||||||||||||||| ||||||||||| | | || ||||    
T  39307372 aatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaa 39307273  T
Q  247 catgagatttcttaggattgttttttcttttaagatttt 285  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39307272 catgagatttcttagaattgttttttcttttaagatttt 39307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 271
Target Start/End: Original strand, 51320908 - 51321132
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||| | ||||||||||       ||||||  |||||||||||||| |||| |||||||||||||  ||| |||||||| ||    
T  51320908 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 51321007  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||   ||||| ||||| ||||||| || |||||||| ||| |||||||    
T  51321008 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaa 51321107  T
Q  247 catgagatttcttaggattgttttt 271  Q
     ||||||||||||  ||||||||||    
T  51321108 gatgagatttcttgagattgttttt 51321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 271
Target Start/End: Complemental strand, 54853645 - 54853463
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||| ||||||||||||||| |||| |||||||||||||  ||| |||||||| ||||| ||||||||||| || |||||||||||||||  ||||||    
T  54853645 gtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggatttt 54853546  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||||||||  |||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  54853545 gatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 54853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 7249899 - 7249795
Alignment:
Q  132 tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaa 231  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7249899 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 7249800  T
Q  232 agtct 236  Q
    |||||    
T  7249799 agtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 23464913 - 23465117
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    |||||||||||||||||||| |       || |||||||||||||| ||||||  |||||||||       || ||||| ||||||||||||| | ||||    
T  23464913 caatcaagactctttccaatataaaaaaagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaa 23465012  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||||||| |  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||| |||    
T  23465013 tcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaa 23465112  T
Q  218 tttta 222  Q
    |||||    
T  23465113 tttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 257
Target Start/End: Complemental strand, 44771020 - 44770862
Alignment:
Q  99 attcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatttt 198  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||||| |||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||    
T  44771020 attcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggatttt 44770921  T
Q  199 gttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 257  Q
    ||  ||||||||||||||||||||  | |||||||||||| ||||  ||||||||||||    
T  44770920 gtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 32322128 - 32322302
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| ||||||||||||   ||| |||||||| |||||||||||||||||||| |||||||||||||||   |||||||||||||    
T  32322128 gtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 32322227  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| |||||||  | ||||| |||||| || |||| ||||||||||||  ||||||||||    
T  32322228 ttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttgagattgttttt 32322302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 37915864 - 37916038
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  37915864 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 37915963  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| | ||||| || ||||||||| || ||||||| || |||||| ||  ||||||||||    
T  37915964 ttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttattgagattgttttt 37916038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 288
Target Start/End: Complemental strand, 36479400 - 36479221
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||| ||||||||| |||||||||||||  ||| |||||||| ||||| |||||||||||||| |||| ||||||||||  ||||||||||||||    
T  36479400 gtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatt 36479301  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||           ||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||  |||||||||||| ||||||||    
T  36479300 tt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgagatt-atttttcttttaaaattttact 36479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 23987251 - 23987415
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| | |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23987251 gtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggatt 23987350  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  23987351 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 23987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 25504887 - 25504696
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||  ||||||        ||||||  ||||||||||||| | ||||    
T  25504887 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaa 25504788  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttc 209  Q
    ||||||||||||  || |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||    
T  25504787 tcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 48261189 - 48261338
Alignment:
Q  122 ttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaatttt 221  Q
    ||||||||  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||||||||  |||||| ||||| ||||||    
T  48261189 ttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt 48261288  T
Q  222 agcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    | || |||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  48261289 aacaagaaaaaatctttcatgaaaatatgagatttcttgagattgttttt 48261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 29649836 - 29649733
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  29649836 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggatt 29649737  T
Q  197 ttgt 200  Q
    ||||    
T  29649736 ttgt 29649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 8711978 - 8712094
Alignment:
Q  172 ttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||||  ||||||||||||||||||  |||||| |||||||||||||||| |||||||||||| || |||||||||||||||||  ||||| ||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattg-tttt 8712076  T
Q  272 tcttttaagattttacta 289  Q
    |||||||| |||||||||    
T  8712077 tcttttaaaattttacta 8712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 272
Target Start/End: Complemental strand, 30967468 - 30967303
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||          ||||||    
T  30967468 gtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggatt 30967379  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt 272  Q
    ||||  |||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||||  |||||||||||    
T  30967378 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgagattgtttttt 30967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  172 ttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||||  |||||||||||||||||| ||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||  ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 49501680 - 49501514
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||          ||||||    
T  49501680 gtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggatt 49501591  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttt--tatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||   ||||| ||||| ||||||| || ||||||||||||  ||| |||| ||||||||||||  ||||||||||    
T  49501590 ttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattgttttt 49501514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 49507745 - 49507579
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||          ||||||    
T  49507745 gtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggatt 49507656  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttt--tatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||   ||||| ||||| ||||||| || ||||||||||||  ||| |||| ||||||||||||  ||||||||||    
T  49507655 ttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattgttttt 49507579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 289
Target Start/End: Original strand, 12913261 - 12913442
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||| ||||| |||| ||||||||  |||  ||||||| |||||||||||||||| ||| |||||||||||||||          ||||||    
T  12913261 gtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggatt 12913350  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||  |||||||||||||||||||| || |||||||| ||| ||||| |||||||||||||| ||| |  |||||||||||| | |||||||    
T  12913351 ttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttctt-ggaattatttttcttttaaaagtttacta 12913442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  137 tggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtct 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||  ||||||||||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  237 tttatgaaaacatgagatttcttaggattgttttt 271  Q
    || || || ||||||||||||||  ||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 11090435 - 11090532
Alignment:
Q  191 tggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||||||  |||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||| | |||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg-tttttctttttaaattttacta 11090532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 97 - 259
Target Start/End: Original strand, 41725162 - 41725321
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||| ||||||||| |||| ||||| |||||||  ||| ||| |||| |||||||||||||||| ||| ||||||||||   ||  |||||||||| |||    
T  41725162 gtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaatt 41725258  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    ||||  |||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||    
T  41725259 ttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 49834982 - 49834890
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  49834982 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 28483936 - 28484099
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||| ||||||||||          ||||||    
T  28483936 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggatt 28484025  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||| | || |||||||||||| ||||||| | ||||||||||| |||| |||||    
T  28484026 ttgtaggattttgtagtgtaatttaa-caagaaaaagtctttcatgaaaagacgagatttcttaagattattttt 28484099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 260
Target Start/End: Complemental strand, 41581965 - 41581795
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| ||||||| | |||| ||||  | ||||||||||  ||| |||||||||| | |||||||||||| |||| ||||||||||||||  ||  ||    
T  41581965 gtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattgga--tt 41581868  T
Q  189 gatggattttgttagattttctagtgaaattttagcatg-aaaaagtcttttatgaaaacatgagatttctta 260  Q
    |||  |||||||  |||||||||||||||||||| |||| ||||| | ||| ||| |||||||||||||||||    
T  41581867 gatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 28370962 - 28371086
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||| | |||| |||||||||| ||  |||  ||||||| ||||||||||||||||  || |||||||||||||||   |||||| || ||||    
T  28370962 tattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattt 28371061  T
Q  198 tgttagattttctagtgaaatttta 222  Q
    |||  ||||||||||||||||||||    
T  28371062 tgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 32684156 - 32684065
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  32684156 gtattcaatcaagacttttcatcatttaaaaaag-tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 271
Target Start/End: Original strand, 5800029 - 5800179
Alignment:
Q  112 ttttaatcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttct 210  Q
    |||| ||||||||||||| | ||| |||||||| ||||||||||||||||| || |||||||||||||||          |||||||||| ||||||| |    
T  5800029 ttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgt 5800118  T
Q  211 agtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    || | ||||||| || |||||||||||| ||||||| || |||||| ||  ||||||||||    
T  5800119 agagtaattttaacaagaaaaagtctttaatgaaaagataagattttttgagattgttttt 5800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 50018288 - 50018391
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||| ||||||| ||||  ||| ||||||||  ||| |||||||| || ||||||||||||| ||| |||||||||||||||   ||||| |||||||    
T  50018288 gtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggatt 50018387  T
Q  197 ttgt 200  Q
    ||||    
T  50018388 ttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 13400887 - 13400785
Alignment:
Q  185 ttttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattt 284  Q
    |||||||| ||||||| ||||||| || ||||| |||  ||| ||||| |||| ||| ||||||||||||||||   ||||||| ||||||||||||| |    
T  13400887 ttttgatgaattttgtgagattttttaatgaaaatttttcataaaaaaatcttctattaaaacatgagatttctatagattgttatttcttttaagatct 13400788  T
Q  285 tac 287  Q
    |||    
T  13400787 tac 13400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 20021424 - 20021495
Alignment:
Q  151 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaatttta 222  Q
    ||||||||||  || ||||||||||||||| |||||||| |||||||| |  |||||| || ||||||||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaatttta 20021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 7249991 - 7249937
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatt 143  Q
    |||||||  ||||||||||||||| ||| ||| ||||||||||||| ||||||||    
T  7249991 gtcttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtatt 7249937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 32684064 - 32684003
Alignment:
Q  210 tagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||  ||||||||||    
T  32684064 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgttttt 32684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 272
Target Start/End: Complemental strand, 36728023 - 36727944
Alignment:
Q  192 ggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt 272  Q
    |||||||||  |||||| ||||||||||||| || |||||| ||||| ||| | ||||||||||| ||  |||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgtttttt 36727944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 19452056 - 19451784
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| ||||| |||||||| | ||||    
T  19452056 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaa 19451957  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  19451956 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 19451857  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19451856 ttttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 49 - 289
Target Start/End: Original strand, 21222130 - 21222371
Alignment:
Q  49 tttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaa 148  Q
    ||||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||||||||||||||  ||||| |||||| ||||    
T  21222130 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaa 21222229  T
Q  149 tcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 248  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||| |||||||||    
T  21222230 tcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaaca 21222329  T
Q  249 tgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  21222330 tgagatttcttaggattgttattttcttttaagattttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 28824620 - 28824349
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    |||||||||||||||| |||||       || |||| ||||||||| |||||||||||||||||       ||||||| |||||||||||||| | ||||    
T  28824620 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 28824521  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||||||||   ||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  28824520 tcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaa 28824422  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  28824421 ttttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 50192767 - 50192526
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaa 148  Q
    |||| ||||||||| ||||||  |||||||||       ||||||| |||||||||||||| | |||||||||||||||| | |||||||||||| ||||    
T  50192767 ttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 50192668  T
Q  149 tcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 248  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  50192667 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 50192568  T
Q  249 tgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  50192567 tgagattttttaggattgtttttttcttttaagattttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 97 - 289
Target Start/End: Complemental strand, 45760178 - 45759985
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| | ||||||||||||||||  |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  45760178 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggatt 45760079  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||  |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45760078 ttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 20 - 289
Target Start/End: Complemental strand, 47654599 - 47654327
Alignment:
Q  20 atcaagactctttccaatttnnnnnnngt-tttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaat 118  Q
    ||||||||||||||||||||       || ||||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||| | | |||||    
T  47654599 atcaagactctttccaatttaaaaaaagtctttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaat 47654500  T
Q  119 cacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||| | |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||| ||||    
T  47654499 cacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaa 47654400  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47654399 ttttagcatgaaaaagtatttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 50 - 289
Target Start/End: Complemental strand, 49198484 - 49198245
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       || |||| ||||||||| |||| | ||||||||||||||||  |  ||||||||| |||||    
T  49198484 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaat 49198386  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  49198385 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 49198286  T
Q  250 gagatttcttaggattgtt-ttttcttttaagattttacta 289  Q
    || |||||||||||||||| |||||||||||||||||||||    
T  49198285 gatatttcttaggattgtttttttcttttaagattttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 29556056 - 29556328
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| ||||||  |||| ||||       |||||||  ||||||||||||| | ||||    
T  29556056 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaa 29556155  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |  ||||||||| |||||    
T  29556156 tcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaa 29556255  T
Q  218 ttttagcatgaaaaagtcttttatgaaa-acatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  29556256 ttttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattgttttttcttttaagatttaacta 29556328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 269
Target Start/End: Original strand, 35279624 - 35279875
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       |  |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  35279624 caatcaagactctttccaatttaaaaaaagacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaa 35279723  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  35279724 tcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 35279823  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttt 269  Q
    ||| | ||||||||||||||| |||||||||||||||||||||| |||||||    
T  35279824 tttcaacatgaaaaagtctttcatgaaaacatgagatttcttagaattgttt 35279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 55 - 288
Target Start/End: Complemental strand, 6304464 - 6304227
Alignment:
Q  55 ttattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagattt-ttaatcacttaaaaaatatctagtggtatttaaaatcatt 153  Q
    ||||||||| |||||| ||||||||||       ||||||| |||||||| ||| |  | ||||||||||||||||  |||||||||||| |||||||||    
T  6304464 ttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 6304365  T
Q  154 caaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgaga 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  6304364 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaa 6304265  T
Q  254 tttcttaggattgtt---ttttcttttaagattttact 288  Q
    ||||||| |||||||   ||||||||||||||||||||    
T  6304264 tttcttatgattgtttttttttcttttaagattttact 6304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 56 - 289
Target Start/End: Complemental strand, 35679338 - 35679102
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||        ||||||||||||||||||||| | ||||||||||||||||  ||  |||||||| |||||||||||    
T  35679338 tattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattca 35679239  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  35679238 aatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatt 35679139  T
Q  256 tcttaggattgt---tttttcttttaagattttacta 289  Q
    ||||| ||||||   ||||||||||||||||||||||    
T  35679138 tcttaagattgtttctttttcttttaagattttacta 35679102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 45535896 - 45536156
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| || ||| ||||||||||       || |||| |||||||||||||| | ||||    
T  45535896 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaa 45535995  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    || |||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  45535996 tcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaa 45536095  T
Q  218 ttttagcatgaaaaagtcttttat------gaaaacatgagatttcttaggattgtttttt 272  Q
    ||||||||||||||||||||| ||      |||||||||||||||||||||||||||||||    
T  45536096 ttttagcatgaaaaagtctttcatgaaaacgaaaacatgagatttcttaggattgtttttt 45536156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 47780695 - 47780935
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||||| ||||||||       ||| ||| |||||||||||||| | ||||||||||||||||  ||||||| |||| |||||    
T  47780695 ttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47780794  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    |||||||| ||  || |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  47780795 cattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacat 47780894  T
Q  250 gagatttcttaggattg-ttttttcttttaagattttacta 289  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  47780895 gagatttcttaagattgtttttttcttttaagattttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 32589129 - 32588936
Alignment:
Q  90 tcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||| | |||||||||||| | || ||||||||||| |  ||| |||||||| |||||||||||||||| ||| |||||||||||||||| |||||||    
T  32589129 tcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttg 32589030  T
Q  190 atggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||     |||||||||||||||||||||||||||    
T  32589029 atggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt-----gattgttttttcttttaagattttact 32588936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 49418036 - 49418295
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| ||||||  |||||||||        |  ||| ||||||||| |||| | ||||    
T  49418036 caatcaagactctttccaatttagaaaaagtcttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaa 49418135  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  49418136 tcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaa 49418235  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttctttt 277  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||| ||| |||||| ||||    
T  49418236 ttttagcatgaaaaaatctttcatgaaaatatgagatttcttagaatttttttttttttt 49418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 730100 - 730314
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||| | ||||    
T  730100 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaa 730199  T
Q  118 tcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaa 216  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  730200 tcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaa 730299  T
Q  217 attttagcatgaaaa 231  Q
    |||||||||||||||    
T  730300 attttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 98 - 288
Target Start/End: Complemental strand, 9577600 - 9577411
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    |||| |||||| | |||| |||||||||||||  ||| ||| |||| |||||||||||||||| ||| |||||||||||||||  |||||||||||||||    
T  9577600 tattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattt 9577501  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  9577500 tgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttgggattgt-ttttcttttaaaattttact 9577411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 136 - 288
Target Start/End: Complemental strand, 31572327 - 31572174
Alignment:
Q  136 gtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtc 235  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  236 ttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttact 288  Q
    ||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  31572227 tttcatgaaatcatgagatttcttagaattgtttttttcttttaagattttact 31572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 48177631 - 48177457
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||| |||||| |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  48177631 gtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 48177532  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  48177531 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 48177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 89 - 285
Target Start/End: Complemental strand, 37014817 - 37014622
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||| ||| || |||||||||||||  ||| ||| |||| ||||||||||||||||| || |||||||| ||||||   |||||    
T  37014817 gtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaatttt 37014718  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagatttt 285  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| | || |||||||||||||||||| ||||| ||||||| ||||||||||    
T  37014717 gatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagattg-tttttctcttaagatttt 37014622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 47 - 271
Target Start/End: Original strand, 6312555 - 6312779
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||| | ||||||||||       ||||||  |||||||||||||| |||| |||| ||||||||  ||| |||||||| ||    
T  6312555 gttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 6312654  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||  |||||| ||||| ||||||| || |||||||||||| |||||||    
T  6312655 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 6312754  T
Q  247 catgagatttcttaggattgttttt 271  Q
     ||||||||||||  ||||||||||    
T  6312755 gatgagatttcttgagattgttttt 6312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 29396557 - 29396383
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  29396557 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 29396458  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  29396457 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 25612188 - 25612362
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  25612188 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggatt 25612287  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||  ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  25612288 ttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 25612362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 47 - 289
Target Start/End: Original strand, 33025493 - 33025726
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagattt-ttaatcacttaaaaaatatctagtggtattta 145  Q
    ||||||| ||||||||| |||||| |||| |||||        |||||| |||||||||||| |  | ||||||||||||||||  ||| |||||||| |    
T  33025493 gttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattca 33025592  T
Q  146 aaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaa 245  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| |||         ||||||||| | |||||||||||||||||||||||| ||||||    
T  33025593 aaatcattcaaattttgaaggattgtttaatacatcagattttg-tgg---------gattttctaataaaattttagcatgaaaaagtctttcatgaaa 33025682  T
Q  246 acatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  33025683 acatgagatttcttatgattgtgttttcttttaagattttacta 33025726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 51701611 - 51701785
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  51701611 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 51701710  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||  ||||||||||    
T  51701711 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattgttttt 51701785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 48524271 - 48524490
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||        || ||| ||||| |||||| | | ||||    
T  48524271 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaa 48524370  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    ||||||||||||  ||| ||| |||| |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  48524371 tcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaa 48524470  T
Q  218 ttttagcatgaaaaagtctt 237  Q
    ||||| ||||||||||||||    
T  48524471 ttttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 271
Target Start/End: Complemental strand, 28387603 - 28387388
Alignment:
Q  56 tattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattca 155  Q
    |||||||| |||||| ||||||||||       ||||||  |||||||||||||| |||| |||| |||||||| |||| |||||||| ||| |||||||    
T  28387603 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattca 28387504  T
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||  |||||| ||||  ||||||| ||  ||||||||||| || |||| ||||||||    
T  28387503 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatt 28387404  T
Q  256 tcttaggattgttttt 271  Q
    ||||  ||||||||||    
T  28387403 tcttgagattgttttt 28387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 15835222 - 15835048
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| || | |||| |||||||| |||| |||||||| ||||||||||||||| | || |||||||||||||||  ||||||||||||||    
T  15835222 gtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggatt 15835123  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    || |  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  15835122 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 15835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 258
Target Start/End: Original strand, 46328073 - 46328234
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||| ||||  ||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||||    
T  46328073 gtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggatt 46328172  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttct 258  Q
    ||||  |||||| ||||| ||||||| || |||||||||||| || |||| || ||||||||    
T  46328173 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 9322669 - 9322495
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||| ||||||| |||| |||| ||||||||  ||  |||||||| |||||||||||||||| ||| |||||||||||||||   |||||||||||||    
T  9322669 gtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggatt 9322570  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    || |  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  9322569 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 9322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 271
Target Start/End: Original strand, 29219318 - 29219481
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattt 197  Q
    ||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||  ||| |||||||||||||||  |||||||||||||||    
T  29219318 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattt 29219417  T
Q  198 tgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||          ||||| ||||||| || |||||||| ||| ||||||| ||||||||||||  ||||||||||    
T  29219418 tg----------tagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgttttt 29219481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 22183322 - 22183457
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       ||||||| ||||||||| |||||| ||||||||||       ||||||| |||||||||||||||| ||||    
T  22183322 caatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaa 22183421  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcatt 153  Q
    ||||||||||||  |||||||||||| |||||||||    
T  22183422 tcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 38536258 - 38536094
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| || |||||| |||  ||| |||||||| ||||| ||||||||||| || |||||||||||||||  ||||||||||||||    
T  38536258 gtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggatt 38536159  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  38536158 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 38536094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 38558476 - 38558312
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| || |||||| |||  ||| |||||||| ||||| ||||||||||| || |||||||||||||||  ||||||||||||||    
T  38558476 gtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggatt 38558377  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||          ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  38558376 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 38558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 45272617 - 45272780
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| ||||||||||||| |||| |||||||| ||||| ||| |||||||||| || ||||||||||||          ||||||    
T  45272617 gtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatttcgaagga-tgtttaataaat----------tggatt 45272705  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||| ||||||| ||||| ||||||| || |||||| |||||||| |||| ||||||||| ||  ||||||||||    
T  45272706 ttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgttttt 45272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 18798522 - 18798614
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||||    
T  18798522 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 97 - 255
Target Start/End: Complemental strand, 5495265 - 5495117
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||| ||||||| || |||| ||||||||||          ||||||    
T  5495265 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggatt 5495176  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 255  Q
    ||||  |||||| ||||| ||||||| || ||||||||| |||||||||| ||||||||    
T  5495175 ttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 49230917 - 49231000
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaat 180  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| |||||||||||||||||||| |||| ||||||||||    
T  49230917 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 271
Target Start/End: Complemental strand, 48668931 - 48668780
Alignment:
Q  110 atttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttc 209  Q
    |||||| |||||||||||||  ||  |||||||| ||||| |||||||||||||| |||||||||||||||          ||||||||||  |||| |     
T  48668931 atttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctg 48668842  T
Q  210 tagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||| ||||||| || |||||||||||| ||||||| ||||||||| || |||||||||||    
T  48668841 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttgggattgttttt 48668780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  139 gtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatttt 198  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 286
Target Start/End: Original strand, 51085865 - 51086014
Alignment:
Q  136 gtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtc 235  Q
    |||||||| ||||| |||||||||| ||| |||| || |||||||  |||||||||| |||||||   ||||||| |||||||||||  ||||     |     
T  51085865 gtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaatatgattttttt 51085964  T
Q  236 ttttatgaaaacatgagatttcttaggattgttttttcttttaagatttta 286  Q
    ||| ||||||| |||||||||  ||||||||||||||||||||||||||||    
T  51085965 tttgatgaaaa-atgagattttctaggattgttttttcttttaagatttta 51086014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  229 aaaagtcttttatgaaaacatgagatttcttaggatt-gttttttcttttaagattttact 288  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 47784410 - 47784542
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||  ||| ||||||||  ||| |||||||| ||||| ||||||| ||| || |||||||||||||||            
T  47784410 gtcttgtggtattcaatcaagactctttgtcatttaaaaaag-tcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat-------- 47784500  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaa 232  Q
      |||||||||| |||||||||||| ||||||||||||||||||    
T  47784501 --tggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 953771 - 953899
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||||||||||       || |||| ||||||||| |||||| ||||||||||       ||||||| |||||| ||||||| | ||||    
T  953771 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaa 953870  T
Q  118 tcacttaaaaaata--tctagtggtattt 144  Q
    |||||||||||| |  |||||||||||||    
T  953871 tcacttaaaaaaaaagtctagtggtattt 953899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 730308 - 730357
Alignment:
Q  240 atgaaaacatgagatttcttaggattgttttttcttttaagattttacta 289  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  730308 atgaaaacatgagatttcttaggtttttttttccttttaagattttacta 730357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 31622626 - 31622536
Alignment:
Q  98 tattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 189  Q
    |||| |||||||| | || |||||||||||||  | | || ||||| ||||||||||||||||| || |||||||||||||||| |||||||    
T  31622626 tattaaatcaagactcttcatcacttaaaaaag-tattgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  156 aatttcgaatgattgtttaataaatcagattttgatggattttgtt-agattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagat 254  Q
    ||||| ||||||||||||| |||||  ||||||||| |||||||||  | |||| ||||| ||||||||||  ||||||||||| ||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  255 ttct 258  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  153 tcaaatttcgaatgattgtttaataaatcagattttgatggattttg 199  Q
    |||||||| |||||||| ||||||||||  |||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 18798615 - 18798676
Alignment:
Q  210 tagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||| ||||||| || |||||||||||| ||||||| |||||||||||   ||||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagattgttttt 18798676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 38781 - 38581
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  38781 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagatttt 38683  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt-ttttcttttaagattttac 287  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38682 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 38583  T
Q  288 ta 289  Q
    ||    
T  38582 ta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 39072 - 38872
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| ||||||||| |||| | |||||||||||||| |  ||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  39072 gtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt 38973  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttcttttaagattttact 288  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38972 gatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttcttttaagattttact 38873  T
Q  289 a 289  Q
    |    
T  38872 a 38872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 89 - 287
Target Start/End: Original strand, 102125 - 102324
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  102125 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt 102224  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattg-ttttttcttttaagattttac 287  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||| |||||| ||||||||||||||    
T  102225 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattgtttttttattttaagattttac 102324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 100202 - 100444
Alignment:
Q  50 ttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaat 149  Q
    |||| ||||||||| |||||| ||||||||||       ||||||| ||| |||||||||| | ||||||||||||||||  |||||||||||| |||||    
T  100202 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 100301  T
Q  150 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacat 249  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||  | |||||||||||||||||| || |||||||||||| ||||||||||    
T  100302 cattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacat 100401  T
Q  250 gagatttcttagga---ttgttttttcttttaagattttacta 289  Q
    ||||||||||||||   || ||||||||||||||||| |||||    
T  100402 gagatttcttaggactgtttttttttcttttaagattgtacta 100444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 787 - 528
Alignment:
Q  18 caatcaagactctttccaatttnnnnnnngttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaa 117  Q
    ||||||||||||||| ||||||       || |||| ||||||||| |||||| ||||||||||       || |||| |||||||||||| | | ||||    
T  787 caatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaa 688  T
Q  118 tcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaa 217  Q
    |||||||||   | | |||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||   ||||||||||||||    
T  687 tcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaa 588  T
Q  218 ttttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttctttt 277  Q
    |||| | |||||||||||||| | |||||||||||||||||||||||| |||||| ||||    
T  587 ttttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatttttttttttttt 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 271
Target Start/End: Complemental strand, 39836 - 39612
Alignment:
Q  47 gttttgtattattcaataaagattatttgtcatttnnnnnnngtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaa 146  Q
    |||||||  |||||||| |||| | ||||||||||       |||||| | |||||||||||||||||| |||||||||||||| ||  |||||||| ||    
T  39836 gttttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaa 39737  T
Q  147 aatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaa 246  Q
    ||||||||||| |||||| |||| ||||||||||  ||||||||||||||||||  |||||| ||||| ||||||| || |||||||||||| |||||||    
T  39736 aatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 39637  T
Q  247 catgagatttcttaggattgttttt 271  Q
     || |||||||||  ||||||||||    
T  39636 gataagatttcttgagattgttttt 39612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 10598 - 10772
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| || | |||| |||||||| |||| |||||||| ||||||||||||||||| || |||||||||||||||   |||||||||||||    
T  10598 gtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggatt 10697  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    || |  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  10698 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 97 - 272
Target Start/End: Original strand, 901 - 1076
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaata-tctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggat 195  Q
    |||||||||||||| |||| ||||||||||||| | ||| |||||||| ||||||||||||||||||||  ||| |||||||||| ||||||||||||||    
T  901 gtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggat 999  T
Q  196 tttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtttttt 272  Q
    |||||  |||||| ||||| ||||||| |  |||||||||||| || |||| ||||||||||||  |||||||||||    
T  1000 tttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttcttgagattgtttttt 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 271
Target Start/End: Complemental strand, 58254 - 58071
Alignment:
Q  89 gtcttgtagtattcaatcaaga-tttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattt 187  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||  |   |||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  58254 gtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattt 58155  T
Q  188 tgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||||||||  |||||| ||||  ||||||| || || ||| ||||| ||||||| ||||||||||||  ||||||||||    
T  58154 tgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttcttgagattgttttt 58071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 13920 - 14084
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  13920 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggatt 14019  T
Q  197 ttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||          ||||  ||||||  | |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  14020 ttgt----------agtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 21407 - 21304
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  21407 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggatt 21308  T
Q  197 ttgt 200  Q
    ||||    
T  21307 ttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 21287 - 21243
Alignment:
Q  227 gaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  21287 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 28510 - 28554
Alignment:
Q  227 gaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 28554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 37084 - 36905
Alignment:
Q  89 gtcttgtagtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 188  Q
    |||||||  ||||||||||||| | ||  ||| || |||||  ||| | |||||| ||||||||| ||||||||||  ||||||||||||||  ||||||    
T  37084 gtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggatttt 36985  T
Q  189 gatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgtt 268  Q
    ||||||||||||  |||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||||  |||||||    
T  36984 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 4238 - 4337
Alignment:
Q  97 gtattcaatcaagatttttaatcacttaaaaaatatctagtggtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 196  Q
    |||||||||||||| |||| |||| ||||||||  ||| |||||||| |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  4238 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  139 gtatttaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaa 232  Q
    |||||||||||||||||||||| ||| || ||||||||||||   |||||||| |||||||| ||||||| |||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 14892 - 14972
Alignment:
Q  191 tggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttt 271  Q
    ||||||||||  |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgttttt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 3798 - 3687
Alignment:
Q  160 tcgaatgattgtttaataaatcagattttgatggattttgttagattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 259  Q
    |||||||||||||||||||||  ||||||||||||||||||  |||||| ||||| ||||||| || ||||| |||||| || |||| || | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  260 aggattgttttt 271  Q
      ||||||||||    
T  3698 gagattgttttt 3687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University