View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3536_low_20 (Length: 305)

Name: NF3536_low_20
Description: NF3536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3536_low_20
NF3536_low_20
[»] chr2 (52 HSPs)
chr2 (10-289)||(26802220-26802499)
chr2 (29-92)||(10288147-10288210)
chr2 (29-92)||(13553144-13553207)
chr2 (15-86)||(44085277-44085348)
chr2 (39-89)||(17112847-17112897)
chr2 (29-91)||(30192362-30192424)
chr2 (29-89)||(3091741-3091801)
chr2 (29-89)||(13850195-13850255)
chr2 (27-90)||(40358120-40358184)
chr2 (45-94)||(7595259-7595308)
chr2 (31-84)||(19520081-19520134)
chr2 (29-90)||(29871363-29871424)
chr2 (29-90)||(34139049-34139110)
chr2 (10-91)||(36383460-36383541)
chr2 (29-90)||(41353508-41353569)
chr2 (10-91)||(44484648-44484729)
chr2 (27-90)||(1416047-1416111)
chr2 (15-83)||(2455242-2455310)
chr2 (45-89)||(5095980-5096024)
chr2 (30-90)||(14957587-14957647)
chr2 (42-90)||(23391071-23391119)
chr2 (29-89)||(34372847-34372907)
chr2 (59-94)||(1489654-1489689)
chr2 (29-92)||(6884907-6884970)
chr2 (43-86)||(8329903-8329946)
chr2 (31-86)||(45693481-45693536)
chr2 (29-87)||(5962640-5962698)
chr2 (36-90)||(20534069-20534123)
chr2 (27-89)||(21805795-21805857)
chr2 (36-90)||(33002818-33002872)
chr2 (51-89)||(36816449-36816487)
chr2 (52-90)||(42607553-42607591)
chr2 (27-85)||(43621957-43622015)
chr2 (29-86)||(5361798-5361854)
chr2 (29-90)||(8352834-8352895)
chr2 (27-92)||(12358311-12358375)
chr2 (29-94)||(20974348-20974413)
chr2 (29-90)||(27307242-27307303)
chr2 (29-90)||(34144562-34144623)
chr2 (29-90)||(35171237-35171298)
chr2 (29-90)||(35792467-35792528)
chr2 (29-94)||(36909854-36909919)
chr2 (18-90)||(1298193-1298265)
chr2 (29-89)||(3196098-3196158)
chr2 (29-89)||(9695072-9695132)
chr2 (29-89)||(17917389-17917449)
chr2 (46-90)||(18075344-18075388)
chr2 (27-94)||(21313492-21313560)
chr2 (29-89)||(23048094-23048154)
chr2 (29-89)||(29893610-29893670)
chr2 (29-92)||(37077786-37077850)
chr2 (29-81)||(37242365-37242417)
[»] chr4 (66 HSPs)
chr4 (29-90)||(39449172-39449232)
chr4 (27-86)||(19879776-19879835)
chr4 (18-89)||(40258205-40258276)
chr4 (31-91)||(44571437-44571497)
chr4 (41-89)||(55960189-55960237)
chr4 (27-90)||(29694062-29694125)
chr4 (29-92)||(31804340-31804403)
chr4 (28-86)||(32303294-32303353)
chr4 (30-89)||(47105911-47105970)
chr4 (45-92)||(48414200-48414247)
chr4 (32-91)||(54801501-54801560)
chr4 (29-91)||(45779302-45779364)
chr4 (35-89)||(46480521-46480575)
chr4 (45-86)||(12074475-12074516)
chr4 (22-90)||(12593615-12593684)
chr4 (31-92)||(20056393-20056454)
chr4 (29-90)||(24235319-24235380)
chr4 (29-94)||(34259810-34259875)
chr4 (29-90)||(37869789-37869850)
chr4 (29-94)||(40629351-40629416)
chr4 (32-89)||(42178064-42178121)
chr4 (29-89)||(18568826-18568886)
chr4 (29-89)||(32901329-32901389)
chr4 (29-93)||(35017149-35017213)
chr4 (31-90)||(8026766-8026825)
chr4 (29-92)||(24209798-24209861)
chr4 (35-90)||(32541723-32541778)
chr4 (29-92)||(40847367-40847430)
chr4 (29-92)||(43864031-43864093)
chr4 (31-90)||(44496007-44496066)
chr4 (29-88)||(45548795-45548854)
chr4 (32-91)||(47014937-47014996)
chr4 (31-90)||(53662441-53662500)
chr4 (27-89)||(9032780-9032842)
chr4 (29-91)||(9472524-9472586)
chr4 (51-89)||(13252537-13252575)
chr4 (29-90)||(22027452-22027514)
chr4 (29-90)||(38864746-38864808)
chr4 (31-93)||(52669622-52669684)
chr4 (27-89)||(53308340-53308402)
chr4 (52-90)||(54591746-54591784)
chr4 (29-86)||(925073-925130)
chr4 (29-90)||(3222988-3223049)
chr4 (29-90)||(9162065-9162126)
chr4 (45-82)||(26739977-26740014)
chr4 (29-89)||(32546367-32546428)
chr4 (33-90)||(33484123-33484180)
chr4 (29-90)||(36444406-36444467)
chr4 (29-89)||(40693633-40693694)
chr4 (29-90)||(44272821-44272882)
chr4 (29-89)||(52263889-52263950)
chr4 (45-90)||(52697482-52697527)
chr4 (29-90)||(53384338-53384399)
chr4 (29-89)||(4972016-4972076)
chr4 (29-89)||(7037495-7037555)
chr4 (29-89)||(8680941-8681001)
chr4 (29-89)||(20632659-20632719)
chr4 (29-92)||(31559535-31559599)
chr4 (10-94)||(39010129-39010213)
chr4 (29-88)||(41262355-41262415)
chr4 (29-93)||(41495009-41495073)
chr4 (18-90)||(44170619-44170691)
chr4 (29-89)||(45176746-45176806)
chr4 (27-91)||(47998592-47998656)
chr4 (31-91)||(51107454-51107514)
chr4 (29-89)||(55996422-55996482)
[»] chr1 (70 HSPs)
chr1 (29-89)||(45350106-45350166)
chr1 (29-90)||(36669381-36669442)
chr1 (27-90)||(586898-586961)
chr1 (31-90)||(26585186-26585245)
chr1 (27-93)||(7371957-7372023)
chr1 (39-88)||(6812114-6812163)
chr1 (50-91)||(26101392-26101433)
chr1 (15-92)||(26501292-26501369)
chr1 (29-90)||(41885720-41885781)
chr1 (50-90)||(41608728-41608768)
chr1 (31-90)||(26547233-26547292)
chr1 (50-89)||(45424063-45424102)
chr1 (29-91)||(27563482-27563544)
chr1 (27-89)||(32938859-32938921)
chr1 (31-89)||(40238438-40238496)
chr1 (29-90)||(7078511-7078572)
chr1 (27-88)||(13362615-13362676)
chr1 (29-90)||(23554750-23554811)
chr1 (45-86)||(25994943-25994984)
chr1 (29-90)||(27352629-27352690)
chr1 (29-86)||(31703489-31703546)
chr1 (29-94)||(34941931-34941996)
chr1 (12-89)||(42615860-42615937)
chr1 (29-90)||(45042260-45042321)
chr1 (31-92)||(51168781-51168842)
chr1 (29-89)||(3919300-3919360)
chr1 (45-89)||(34157806-34157850)
chr1 (31-91)||(35026889-35026948)
chr1 (24-92)||(39128407-39128475)
chr1 (29-89)||(40118726-40118786)
chr1 (29-89)||(43105105-43105165)
chr1 (29-89)||(50528068-50528128)
chr1 (15-90)||(8934593-8934668)
chr1 (29-92)||(36794612-36794675)
chr1 (31-94)||(42299199-42299262)
chr1 (50-89)||(45863753-45863792)
chr1 (29-91)||(2854971-2855033)
chr1 (51-85)||(5043096-5043130)
chr1 (45-91)||(13078841-13078887)
chr1 (29-91)||(30530585-30530647)
chr1 (29-90)||(37515914-37515976)
chr1 (29-90)||(50775167-50775229)
chr1 (29-94)||(2827721-2827786)
chr1 (49-86)||(8845966-8846003)
chr1 (29-90)||(11038261-11038322)
chr1 (29-90)||(11097895-11097956)
chr1 (29-90)||(18610772-18610833)
chr1 (29-90)||(21854475-21854536)
chr1 (29-94)||(22674707-22674772)
chr1 (29-90)||(29489370-29489431)
chr1 (33-90)||(29632433-29632490)
chr1 (29-94)||(35846888-35846953)
chr1 (29-90)||(42843355-42843416)
chr1 (29-90)||(43755689-43755750)
chr1 (29-89)||(46281436-46281497)
chr1 (29-86)||(47113277-47113334)
chr1 (29-86)||(50145812-50145869)
chr1 (30-86)||(835874-835930)
chr1 (49-89)||(7648250-7648290)
chr1 (41-89)||(13355081-13355129)
chr1 (29-89)||(25995460-25995520)
chr1 (39-91)||(31414929-31414981)
chr1 (29-89)||(32821635-32821695)
chr1 (29-93)||(32873337-32873401)
chr1 (32-88)||(32966268-32966324)
chr1 (29-93)||(34157516-34157579)
chr1 (31-91)||(43457832-43457892)
chr1 (31-91)||(46902611-46902671)
chr1 (29-89)||(49621363-49621423)
chr1 (31-90)||(51703465-51703524)
[»] chr8 (32 HSPs)
chr8 (27-90)||(44711977-44712040)
chr8 (29-87)||(43186298-43186356)
chr8 (15-88)||(6806909-6806982)
chr8 (27-84)||(20065621-20065678)
chr8 (18-94)||(29913559-29913635)
chr8 (15-90)||(23952493-23952568)
chr8 (29-92)||(36064027-36064090)
chr8 (33-86)||(12697728-12697781)
chr8 (29-90)||(32725791-32725852)
chr8 (15-91)||(14228705-14228781)
chr8 (35-90)||(33115904-33115960)
chr8 (31-87)||(40614203-40614259)
chr8 (27-90)||(8955697-8955760)
chr8 (29-86)||(3893409-3893466)
chr8 (29-90)||(28927680-28927741)
chr8 (29-89)||(41406867-41406927)
chr8 (29-92)||(3650110-3650173)
chr8 (10-89)||(13884316-13884395)
chr8 (52-90)||(5697676-5697714)
chr8 (15-89)||(14531621-14531695)
chr8 (29-91)||(30927942-30928004)
chr8 (27-93)||(34578386-34578452)
chr8 (29-91)||(37784385-37784447)
chr8 (29-90)||(6004943-6005004)
chr8 (29-90)||(33863259-33863320)
chr8 (45-90)||(40089853-40089898)
chr8 (29-90)||(42012601-42012662)
chr8 (29-93)||(1158346-1158410)
chr8 (50-90)||(2621784-2621824)
chr8 (29-89)||(10344324-10344384)
chr8 (31-86)||(39031224-39031280)
chr8 (29-89)||(40608513-40608573)
[»] chr5 (41 HSPs)
chr5 (29-92)||(582878-582941)
chr5 (29-89)||(27440479-27440539)
chr5 (34-91)||(27005495-27005552)
chr5 (41-90)||(35464606-35464655)
chr5 (29-89)||(38010872-38010932)
chr5 (31-94)||(8787169-8787232)
chr5 (29-92)||(22402637-22402700)
chr5 (27-86)||(34216526-34216585)
chr5 (32-86)||(3167322-3167376)
chr5 (51-89)||(6538870-6538908)
chr5 (52-90)||(7927354-7927392)
chr5 (45-91)||(18004283-18004329)
chr5 (29-90)||(19981996-19982058)
chr5 (45-91)||(21018051-21018097)
chr5 (29-95)||(35098743-35098809)
chr5 (29-86)||(17489351-17489408)
chr5 (29-90)||(31626087-31626148)
chr5 (29-89)||(3263519-3263579)
chr5 (29-89)||(6529019-6529079)
chr5 (27-90)||(18511804-18511868)
chr5 (43-87)||(24077856-24077900)
chr5 (32-92)||(25345337-25345397)
chr5 (29-89)||(41460116-41460176)
chr5 (27-89)||(5821620-5821682)
chr5 (50-89)||(26686881-26686920)
chr5 (50-89)||(26956612-26956651)
chr5 (29-91)||(4954464-4954526)
chr5 (50-92)||(19980437-19980479)
chr5 (29-91)||(27340867-27340929)
chr5 (27-89)||(30420626-30420688)
chr5 (29-90)||(7144576-7144637)
chr5 (24-89)||(19983841-19983905)
chr5 (53-90)||(21353550-21353587)
chr5 (29-90)||(24329993-24330054)
chr5 (31-88)||(30103464-30103521)
chr5 (29-90)||(34693227-34693288)
chr5 (29-89)||(40829414-40829475)
chr5 (29-89)||(15918001-15918061)
chr5 (29-89)||(17063865-17063925)
chr5 (48-88)||(17247797-17247837)
chr5 (50-82)||(43493689-43493721)
[»] chr6 (25 HSPs)
chr6 (29-91)||(3401082-3401144)
chr6 (10-88)||(12501475-12501553)
chr6 (31-86)||(1434677-1434732)
chr6 (29-90)||(11742993-11743054)
chr6 (51-86)||(23775970-23776005)
chr6 (27-89)||(26839511-26839574)
chr6 (31-86)||(29197727-29197782)
chr6 (29-91)||(9851312-9851374)
chr6 (29-91)||(10521124-10521186)
chr6 (15-89)||(12500024-12500098)
chr6 (15-89)||(12507353-12507427)
chr6 (15-89)||(12508803-12508877)
chr6 (29-90)||(17417246-17417307)
chr6 (18-89)||(32784738-32784809)
chr6 (52-86)||(3373776-3373810)
chr6 (45-91)||(26396502-26396548)
chr6 (27-89)||(27102115-27102177)
chr6 (27-89)||(27143937-27143999)
chr6 (29-90)||(3339510-3339571)
chr6 (29-90)||(12044331-12044392)
chr6 (29-89)||(3660364-3660424)
chr6 (55-91)||(9849890-9849926)
chr6 (10-86)||(12277897-12277973)
chr6 (29-89)||(25995442-25995502)
chr6 (29-89)||(26094905-26094965)
[»] chr3 (52 HSPs)
chr3 (29-91)||(29705901-29705963)
chr3 (29-89)||(1295332-1295392)
chr3 (41-89)||(4189737-4189785)
chr3 (27-90)||(29800558-29800621)
chr3 (26-89)||(34663079-34663142)
chr3 (40-86)||(29222422-29222468)
chr3 (31-89)||(38693580-38693638)
chr3 (37-94)||(21239097-21239154)
chr3 (29-90)||(27198171-27198232)
chr3 (31-88)||(40419655-40419712)
chr3 (9-93)||(40499732-40499816)
chr3 (27-91)||(45902401-45902465)
chr3 (29-92)||(33074871-33074934)
chr3 (29-92)||(38944152-38944215)
chr3 (32-90)||(53473609-53473667)
chr3 (29-90)||(7867722-7867783)
chr3 (51-92)||(9582192-9582233)
chr3 (29-90)||(16267908-16267969)
chr3 (29-90)||(36799397-36799458)
chr3 (38-90)||(884533-884585)
chr3 (29-89)||(1207946-1208006)
chr3 (41-89)||(42249405-42249453)
chr3 (29-89)||(48205045-48205105)
chr3 (32-92)||(49031556-49031616)
chr3 (29-92)||(7351649-7351712)
chr3 (32-91)||(27646496-27646555)
chr3 (29-92)||(45150277-45150340)
chr3 (31-90)||(46344413-46344472)
chr3 (31-89)||(14957836-14957894)
chr3 (50-92)||(24489642-24489684)
chr3 (43-89)||(32596188-32596234)
chr3 (51-89)||(32622396-32622434)
chr3 (29-90)||(39901590-39901652)
chr3 (29-91)||(41717261-41717323)
chr3 (29-91)||(42755653-42755715)
chr3 (29-90)||(7225-7286)
chr3 (29-90)||(9557933-9557994)
chr3 (29-90)||(35376562-35376623)
chr3 (29-90)||(53932402-53932463)
chr3 (29-89)||(11327108-11327168)
chr3 (29-89)||(12094400-12094460)
chr3 (29-89)||(13159661-13159721)
chr3 (31-91)||(20096433-20096493)
chr3 (31-86)||(22836207-22836263)
chr3 (29-89)||(41309000-41309060)
chr3 (29-89)||(43441672-43441732)
chr3 (29-89)||(47141611-47141671)
chr3 (51-91)||(48049933-48049973)
chr3 (29-88)||(48789328-48789388)
chr3 (45-89)||(49167697-49167741)
chr3 (27-90)||(50559220-50559284)
chr3 (30-94)||(53133964-53134028)
[»] chr7 (41 HSPs)
chr7 (33-81)||(4963791-4963839)
chr7 (32-89)||(37355132-37355189)
chr7 (29-90)||(43255578-43255639)
chr7 (29-88)||(10014966-10015025)
chr7 (29-92)||(13437195-13437258)
chr7 (29-92)||(35857494-35857557)
chr7 (29-92)||(43079643-43079706)
chr7 (32-86)||(11604696-11604750)
chr7 (32-90)||(12141898-12141956)
chr7 (32-90)||(47530305-47530363)
chr7 (51-89)||(49167888-49167926)
chr7 (45-86)||(40760795-40760836)
chr7 (27-88)||(41798221-41798282)
chr7 (27-91)||(22692082-22692146)
chr7 (43-91)||(24249773-24249821)
chr7 (50-90)||(41227066-41227106)
chr7 (29-89)||(44175545-44175605)
chr7 (31-71)||(49014412-49014452)
chr7 (29-88)||(27688964-27689023)
chr7 (51-90)||(32919013-32919052)
chr7 (48-90)||(2849551-2849593)
chr7 (48-86)||(7458221-7458259)
chr7 (29-86)||(24532953-24533011)
chr7 (29-91)||(34304689-34304751)
chr7 (29-91)||(38990099-38990161)
chr7 (29-90)||(116630-116691)
chr7 (29-89)||(6655626-6655687)
chr7 (29-90)||(18157196-18157257)
chr7 (29-90)||(32933547-32933607)
chr7 (31-88)||(35212968-35213025)
chr7 (29-90)||(38023435-38023496)
chr7 (29-89)||(7807055-7807115)
chr7 (29-89)||(26153646-26153705)
chr7 (29-89)||(28081793-28081853)
chr7 (36-92)||(29355359-29355415)
chr7 (29-89)||(29763830-29763890)
chr7 (29-89)||(32044780-32044840)
chr7 (29-89)||(33050183-33050243)
chr7 (27-91)||(40693537-40693601)
chr7 (41-89)||(42431723-42431771)
chr7 (31-90)||(47012582-47012642)
[»] scaffold0121 (1 HSPs)
scaffold0121 (31-92)||(3935-3997)
[»] scaffold0065 (1 HSPs)
scaffold0065 (18-89)||(38983-39054)
[»] scaffold0522 (1 HSPs)
scaffold0522 (29-89)||(2515-2575)
[»] scaffold0662 (1 HSPs)
scaffold0662 (32-91)||(1076-1135)
[»] scaffold0032 (1 HSPs)
scaffold0032 (45-92)||(35980-36027)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-92)||(249153-249216)
[»] scaffold0154 (1 HSPs)
scaffold0154 (29-91)||(9859-9921)
[»] scaffold0001 (1 HSPs)
scaffold0001 (27-89)||(395861-395923)
[»] scaffold0086 (1 HSPs)
scaffold0086 (27-80)||(17339-17392)
[»] scaffold0018 (1 HSPs)
scaffold0018 (29-90)||(36001-36062)
[»] scaffold0058 (1 HSPs)
scaffold0058 (29-89)||(2943-3003)
[»] scaffold0019 (1 HSPs)
scaffold0019 (31-91)||(72364-72424)
[»] scaffold0011 (1 HSPs)
scaffold0011 (29-89)||(18595-18655)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-89)||(147267-147327)


Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 10 - 289
Target Start/End: Original strand, 26802220 - 26802499
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatatcaacactcactaact 109  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26802220 atgataagaacaacatttaagtataagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcgtttctctatatcaacactcactaact 26802319  T
Q  110 aagatgttctattggttagagcatgtatgagtcaatataaaatcgtcgtaagttctgacatccgtaccgtttgcttttgtatataaacctttgactcatt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26802320 aagatgttctattggttagagcatgtatgagtcaatataaaatcgtcgtaagttctgacatccgtaccgtttgcctttgtatataaacctttgactcatt 26802419  T
Q  210 gcaaatacatttgagaaagtagtaataaaatgtatttacaataaatcaaagacttatatacaaagataatgggtaaagat 289  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802420 gtaaatacatttgagaaagtagtaataaaatgtatttacaataaatcaaagacttatatacaaagataatgggtaaagat 26802499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 10288210 - 10288147
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||||| ||||  |||||||||||||||||| ||||| |||||||||||||||||    
T  10288210 agtatgagagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctctat 10288147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 13553207 - 13553144
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| |||||||| |||||||||||||||| |  ||||| |||||||||||||||||    
T  13553207 agtatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttctctat 13553144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 44085348 - 44085277
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||| ||| | |||||| || | |||||||| |||||||| ||||||||||||||||||||||||||||    
T  44085348 aagaacatcatgtgagtatgtgatagaaaattgtccaaaaattgtcacaaaataattgtataaatatcattt 44085277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 17112847 - 17112897
Alignment:
Q  39 aaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  17112847 aaaaaattgtccaaaaattatcacaaaataattatataaatatcgtttctc 17112897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 30192362 - 30192424
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||| | ||||||||||||||||    
T  30192362 agtatgagagagaaaattgttcaaaaatttttacaaaatgattgaacaaatatcatttctcta 30192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 3091801 - 3091741
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||||||  |||| ||||||||||||| ||||| ||||||||||||||    
T  3091801 agtatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcatttctc 3091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 13850195 - 13850255
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||||||||  |||||| |||||||||||||||||||||    
T  13850195 agtatgagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttctc 13850255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 40358120 - 40358184
Alignment:
Q  27 taagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||||  |||||||||| | |||||| ||||| |||||||||||||||    
T  40358120 taagtatgagagaaaaaattgtcacaaaaattattaaaaaatagttgtagaaatatcatttctct 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 7595308 - 7595259
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||| |||||||||||||||| | ||||||||||||||||||||| ||||    
T  7595308 ttgtacaaaaattatcacaaatttattgtataaatatcatttctccatat 7595259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 19520134 - 19520081
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcat 84  Q
    ||||||| | ||||||||||||||||||||  ||||| ||||||||||||||||    
T  19520134 tatgagaaagaaaattgttcaaaaattatcgtaaaatgattgtataaatatcat 19520081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 29871363 - 29871424
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||||| |||||||||| || ||| ||| |||||||| |||||||||||||||    
T  29871363 agtatgagaaaaaaagttgttcaaaagttgtcataaactaattgtacaaatatcatttctct 29871424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 34139049 - 34139110
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||  ||||||||||||||| ||  |||| |||||||||||||||    
T  34139049 agtatgagagataaaattgtcaaaaaattatcacaaagtagatgtacaaatatcatttctct 34139110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 36383541 - 36383460
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||| ||||||| ||| | ||||||||||| ||| |||| ||||| || |||||||||  ||||| ||||||||||||||||    
T  36383541 atgataagaacatcatgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatctttgtacaaatatcatttctcta 36383460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 41353508 - 41353569
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||| ||||||||||| ||| | |||||| |||||||||||||||    
T  41353508 agtatgagagagaaagttgttaaaaaattatcataaattgattgtacaaatatcatttctct 41353569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 44484648 - 44484729
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||| ||||||| ||| | ||||||||||| ||| |||| |||||||| | |||||||  ||||| ||||||||||||||||    
T  44484648 atgataagaacatcatgtgagtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctcta 44484729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 1416047 - 1416111
Alignment:
Q  27 taagtatgagagaaaaaattgt-tcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||||  |||||||||||| ||||| | | | ||||||||||||||||    
T  1416047 taagtatgagagaaaaaattgtcacaaaaattatcataaaatgaatatttaaatatcatttctct 1416111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 2455310 - 2455242
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatca 83  Q
    |||||||| |||  ||||||||||||||| || ||||||| || ||  |||||||||||||||||||||    
T  2455310 aagaacaaaattagagtatgagagaaaaatttattcaaaagttctccaaaaataattgtataaatatca 2455242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 5095980 - 5096024
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  5095980 ttgtccaaaaattatcacaaaatgattgtacaaatatcatttctc 5096024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 14957647 - 14957587
Alignment:
Q  30 gtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||| | |||||||| || |||||||||||||||||||||  | |||||||||||||    
T  14957647 gtatgagaaagaaaattgtacagaaattatcacaaaataattgttcatatatcatttctct 14957587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 23391119 - 23391071
Alignment:
Q  42 aaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||  ||||||||||||||| |||||||| |||||||||||||||    
T  23391119 aaattgtataaaaattatcacaaattaattgtacaaatatcatttctct 23391071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 34372907 - 34372847
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||||||  ||||||| | | |||||||||||| ||||||||||||||    
T  34372907 agtatgagagagaaaattgtcaaaaaattgttagaaaataattgtagaaatatcatttctc 34372847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 94
Target Start/End: Original strand, 1489654 - 1489689
Alignment:
Q  59 tcacaaaataattgtataaatatcatttctctatat 94  Q
    |||||||||| |||||||||||||||||||||||||    
T  1489654 tcacaaaatagttgtataaatatcatttctctatat 1489689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 6884970 - 6884907
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| ||||  |||| |||||||||| || ||||| |||||||||||||||||    
T  6884970 agtatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttctctat 6884907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 8329903 - 8329946
Alignment:
Q  43 aattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||| ||||||||||||||||||| || ||||||||||||||    
T  8329903 aattgtccaaaaattatcacaaaatagttatataaatatcattt 8329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 45693481 - 45693536
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||| ||||| ||||  ||||||||||| |||||||||||| |||||||||||    
T  45693481 tatgagaaaaaaagttgtcaaaaaattatcataaaataattgtacaaatatcattt 45693536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 5962698 - 5962640
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttc 87  Q
    ||||||||| | ||| |||| |||||||||||||| ||| |||||| ||||||||||||    
T  5962698 agtatgagaaataaagttgtccaaaaattatcacataatgattgtacaaatatcatttc 5962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 20534069 - 20534123
Alignment:
Q  36 gagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||| |||||||||||| ||||||||||||||  ||||  |||||||||||||||    
T  20534069 gagagaaaattgttcaacaattatcacaaaatggttgtgcaaatatcatttctct 20534123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 21805795 - 21805857
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||| ||||||||  |||| || |||| |||| |||||| ||||||||||||||    
T  21805795 taagtatgagagagaaaattgtctaaaagttgtcactaaatgattgtacaaatatcatttctc 21805857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 33002872 - 33002818
Alignment:
Q  36 gagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| || ||||||| |||| ||||  |||||||||||||||||||||    
T  33002872 gagaaaaaattattgaaaaattgtcactaaatggttgtataaatatcatttctct 33002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 36816449 - 36816487
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  36816449 aaaaattatcataaaatagttgtataaatatcatttctc 36816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 42607553 - 42607591
Alignment:
Q  52 aaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  42607553 aaaattgtcacaaaataattgtacaaatatcatttctct 42607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 43621957 - 43622015
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatt 85  Q
    ||||||||||||| ||| |||||||||| || ||| |||||| ||||| ||||||||||    
T  43621957 taagtatgagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 5361854 - 5361798
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||| |||||||| |||||||||| | ||||| |||||| |||||||||||    
T  5361854 agtatgagagagaaaattgt-caaaaattattagaaaatgattgtacaaatatcattt 5361798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 8352895 - 8352834
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||  |||| |||| | |||||| ||||| |||||||||||||||    
T  8352895 agtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctct 8352834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 12358375 - 12358311
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||| |||||| | ||||| || ||||||||| |||||| | |||||||||||||||    
T  12358375 taagtatgagagagaaaattatccaaaa-ttgtcacaaaatgattgtacatatatcatttctctat 12358311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 20974413 - 20974348
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||| ||| |||| ||||| || ||||||| || ||||| ||||||||||||| |||||    
T  20974413 agtatgagagagaaagttgtacaaaagttgtcacaaattagttgtaaaaatatcatttctatatat 20974348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 27307242 - 27307303
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| || ||||||| | |||||| |||||||||||||||    
T  27307242 agtatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctct 27307303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 34144562 - 34144623
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| |||||||| ||||||| |  ||||| |||||||||||||||    
T  34144562 agtatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttctct 34144623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 35171237 - 35171298
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| | |||||| |||||||||  ||||| |||||||||||||||    
T  35171237 agtatgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttctct 35171298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 35792467 - 35792528
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||||| ||||  ||||||||||||||| |  ||||| |||||||||||||||    
T  35792467 agtatgagataaaaagttgtctaaaaattatcacaaagttgttgtacaaatatcatttctct 35792528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 36909854 - 36909919
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||||| |||| ||| |||| ||||| || |||||||||  ||||| |||||||||||||||||||    
T  36909854 agtatgtgagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctctatat 36909919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 1298265 - 1298193
Alignment:
Q  18 aacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||| ||| ||||||||||||| ||||||||  |||||||||  ||||||  || || |||||||||||||||    
T  1298265 aacatcatataagtatgagagagaaaattgtcaaaaaattatagcaaaatggttctacaaatatcatttctct 1298193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 3196098 - 3196158
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| || ||||||| | |||||| ||||||||||||||    
T  3196098 agtatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctc 3196158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 9695072 - 9695132
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||||||||| || |||  ||||| ||||||||||||||    
T  9695072 agtatgagagagaaagttgtccaaaaattatctcataatggttgtacaaatatcatttctc 9695132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 17917449 - 17917389
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||| |  ||||||| | | |||||||||||| ||||||||||||||    
T  17917449 agtatgagagagaaaattatcaaaaaattgttaaaaaataattgtacaaatatcatttctc 17917389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 18075344 - 18075388
Alignment:
Q  46 tgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||| ||||||| ||| |||||||||||||||||||||| |||||    
T  18075344 tgtttaaaaattgtcataaaataattgtataaatatcatatctct 18075388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 21313492 - 21313560
Alignment:
Q  27 taagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||||||||||||||||| | |  |||||||||||| | ||| |||||| |||||||||||||| ||||    
T  21313492 taagtatgagagaaaaaactatcacaaaaattatcaaagaatgattgtacaaatatcatttctcaatat 21313560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 23048094 - 23048154
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| || | ||||||||||| |||| | |||||| ||||||||||||||    
T  23048094 agtatgagagagaaagttatacaaaaattatctcaaattgattgtacaaatatcatttctc 23048154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 29893670 - 29893610
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||| ||||| ||| |||| ||||| |||||||||| || ||||| ||||||||||||||    
T  29893670 agtataagagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 37077850 - 37077786
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||| ||| ||||||||| |||||||||||| |||||| ||||  ||||||||||| |||||    
T  37077850 agtatgaaagataaaattgttacaaaaattatcaaaaaatagttgttcaaatatcatttttctat 37077786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 37242365 - 37242417
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatat 81  Q
    ||||||||||||||| || |  |||| |||||| |||||||||||||||||||    
T  37242365 agtatgagagaaaaatttatcaaaaagttatcataaaataattgtataaatat 37242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 39449232 - 39449172
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  39449232 agtatgagagaaaaaattgt-caaaagttatcacaaaatagttgtataaatatcatttctct 39449172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 19879835 - 19879776
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||| | ||||||||||||||||||| ||||| |||||| |||||||||||    
T  19879835 taagtatgagagagagaattgttcaaaaattatcataaaatgattgtacaaatatcattt 19879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 40258276 - 40258205
Alignment:
Q  18 aacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| ||| ||||||||||||| ||| || |||||||||||||| |||||  ||||||||||||||||||||    
T  40258276 aacatcatataagtatgagagagaaagttattcaaaaattatcataaaatggttgtataaatatcatttctc 40258205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 44571437 - 44571497
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| |||||| |  ||||||||| ||||| |||||||||||||||||||||||||    
T  44571437 tatgagagagaaaattatcaaaaaattattacaaattaattgtataaatatcatttctcta 44571497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 55960237 - 55960189
Alignment:
Q  41 aaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  55960237 aaaattgttgaaaaattataataaaataattgtataaatatcatttctc 55960189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 29694062 - 29694125
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||| |||||| |  |||||||||||||||||||| ||| |||||||||||||||    
T  29694062 taagtatgaaagagaaaattatctaaaaattatcacaaaataatagtagaaatatcatttctct 29694125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 31804340 - 31804403
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| |||||| |  ||||||||||||||| | |||||| |||||||||||||||||    
T  31804340 agtatgagagagaaaattatcaaaaaattatcacaaagtgattgtacaaatatcatttctctat 31804403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 32303294 - 32303353
Alignment:
Q  28 aagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||| ||| |||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  32303294 aagtatgtgaggaaaaattgttacaaaaattatcacaaaatagttgtacaaatatcattt 32303353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 47105970 - 47105911
Alignment:
Q  30 gtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||| ||| |||| ||||| |||||||||| |||||||| ||||||||||||||    
T  47105970 gtatgagagagaaagttgtacaaaagttatcacaaattaattgtacaaatatcatttctc 47105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 48414247 - 48414200
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  48414247 ttgtttaaaatttatcacaaaataattgtataaatatcatttatctat 48414200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 54801501 - 54801560
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||| |||||||| |||||||||| | ||||| |||||| ||||||||||||||||    
T  54801501 atgagagagaaaattgtacaaaaattataataaaatgattgtacaaatatcatttctcta 54801560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 45779302 - 45779364
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| | ||| ||||  ||||||||| |||||||| ||||||||||||||||||||||    
T  45779302 agtatgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcatttctcta 45779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 46480521 - 46480575
Alignment:
Q  35 agagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||    
T  46480521 agagagaaaattgtacaaaaattaccacaaattaattgtacaaatatcatttctc 46480575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 12074516 - 12074475
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  12074516 ttgttcaaaaattatcataaaatagttgtataaatatcattt 12074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 12593615 - 12593684
Alignment:
Q  22 acatttaagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||| |||||||||||||||  ||| || |||||||| ||| ||||||||| ||||||||||||||||||    
T  12593615 acatgtaagtatgagagaaatgattatttcaaaaattgtcaaaaaataattatataaatatcatttctct 12593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 20056454 - 20056393
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||| ||| |||| |||||||||| ||| |||| ||||| |||||||||||||||||    
T  20056454 tatgagagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttctctat 20056393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 24235380 - 24235319
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| |||||||| ||||||| | |||||| |||||||||||||||    
T  24235380 agtatgagagagaaagttgtacaaaaattgtcacaaattgattgtacaaatatcatttctct 24235319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 34259875 - 34259810
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||| ||| |||||||| | || |||||||||  ||||| |||||||||||||||||||    
T  34259875 agtatgagagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctctatat 34259810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 37869789 - 37869850
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  |||| |||| ||||||||||||| ||||||||||||||||    
T  37869789 agtatgagagagaaagttgtctaaaagttattacaaaataattgtttaaatatcatttctct 37869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 40629351 - 40629416
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||| ||| |||| ||||  |||| |||||||| ||||| |||||||||||||||||||    
T  40629351 agtatgagagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctctatat 40629416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 42178064 - 42178121
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||| |||||| |||||||||| ||||| ||| |||||| ||||||||||||||    
T  42178064 atgagagagaaaattattcaaaaattgtcacataatgattgtacaaatatcatttctc 42178121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 18568826 - 18568886
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||| ||||||||| |||| ||||| || |||||||||  ||||||||||||||||||||    
T  18568826 agtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctc 18568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 32901389 - 32901329
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||| ||| |||| |||||||||||| |||||| ||||| ||||||||||||||    
T  32901389 agtatgaaagagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcatttctc 32901329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 35017213 - 35017149
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||||| ||| ||||  |||| || |||||||||| ||||| ||||||||||||||||||    
T  35017213 agtatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctctata 35017149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 8026766 - 8026825
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||| |||| ||||| || ||||||| | ||||||||||||||||||||||    
T  8026766 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtataaatatcatttctct 8026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 24209798 - 24209861
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||||||||  ||||||| ||||||| |  | |||||||||||||||||||||    
T  24209798 agtatgagagagaaaattgtctaaaaattgtcacaaagtggtcgtataaatatcatttctctat 24209861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 32541723 - 32541778
Alignment:
Q  35 agagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||||||| | |||||| ||  | |||||||||||||||    
T  32541723 agagaaaaaattgttcaaaaattataataaaatagttccacaaatatcatttctct 32541778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 40847430 - 40847367
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||||| ||  ||||||| | |||||||||||||| |||||| ||||||||||    
T  40847430 agtatgagagagaaaatggtctaaaaattgttacaaaataattgtacaaatataatttctctat 40847367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 43864093 - 43864031
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||||| |||| |||||||| |  ||||||| ||||| |||||||||||||||||    
T  43864093 agtatgagagaaaaagttgt-caaaaattgtaccaaaatagttgtacaaatatcatttctctat 43864031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 44496007 - 44496066
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| |||||| |  ||||||||||| |||||||||||| || ||||||||||||    
T  44496007 tatgagagagaaaattatctaaaaattatcaaaaaataattgtacaactatcatttctct 44496066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 45548795 - 45548854
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||| ||||||| ||||  |||||||||||||||||  ||||| |||||||||||||    
T  45548795 agtatgaaagaaaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct 45548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 47014996 - 47014937
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||| ||| ||||| |||| || |||||||||| ||||| ||||||||||||||||    
T  47014996 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttctcta 47014937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 53662441 - 53662500
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||| |||| |||||||| | |||||||| ||||| |||||||||||||||    
T  53662441 tatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctct 53662500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 9032842 - 9032780
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||| ||| |||| ||||| || ||||||| | |||||| ||||||||||||||    
T  9032842 taagtatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctc 9032780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 9472524 - 9472586
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||| ||||  ||||||||| | |||||| ||||| ||||||||||||||||    
T  9472524 agtatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctcta 9472586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 13252575 - 13252537
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  13252575 aaaaattatcacaaaatgattatataaatatcatttctc 13252537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 22027452 - 22027514
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||  |||||| |||||||||||||||||| || |||| |||||||    
T  22027452 agtatgagagagaaaattgtcacaaaaaatatcacaaaataattgtacaagtatcgtttctct 22027514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 38864746 - 38864808
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaa-ttatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  ||||| || |||||||||||||||| |||||||||||||||    
T  38864746 agtatgagagagaaagttgtcaaaaaagttgtcacaaaataattgtacaaatatcatttctct 38864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 52669622 - 52669684
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||| ||| |||| ||||| |||||||||| |  ||||| ||||||||||||||||||    
T  52669622 tatgagagagaaagttgtacaaaagttatcacaaattgtttgtacaaatatcatttctctata 52669684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 53308402 - 53308340
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||||| ||| ||||  ||||||||||||||| ||||| || ||||||||||||||    
T  53308402 taagtattagagagaaagttgtcaaaaaattatcacaaattaattatacaaatatcatttctc 53308340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 54591746 - 54591784
Alignment:
Q  52 aaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||||||||||||||| || |||||||||||||||    
T  54591746 aaaattatcacaaaataattatacaaatatcatttctct 54591784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 925073 - 925130
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||| ||||||||  |||| || |||||||||  |||||||||||||||||    
T  925073 agtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcattt 925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 3223049 - 3222988
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| || ||||||| | |||||| |||||||||||||||    
T  3223049 agtatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctct 3222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 9162126 - 9162065
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| ||||| ||||||||  |||| || ||||||||| |||||| |||||||||||||||    
T  9162126 agtattagagagaaaattgtcaaaaagttgtcacaaaatgattgtacaaatatcatttctct 9162065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 26740014 - 26739977
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatc 82  Q
    |||||||||||||||||||||||  |||||||||||||    
T  26740014 ttgttcaaaaattatcacaaaatggttgtataaatatc 26739977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 32546367 - 32546428
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||| ||||  |||||||| ||||||||||| |||  ||||||||||||||    
T  32546367 agtatgagagaaaaagttgtaacaaaaattgtcacaaaataaatgttcaaatatcatttctc 32546428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 33484123 - 33484180
Alignment:
Q  33 tgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||| ||| |||| ||||||||||||||||||  ||||| |||||||||| ||||    
T  33484123 tgagagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatcattactct 33484180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 36444406 - 36444467
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||| |||| |||||| |||||  ||||| |||||||||||||||    
T  36444406 agtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctct 36444467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 40693633 - 40693694
Alignment:
Q  29 agtatgagagaaaaaattgt-tcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||  |||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  40693633 agtatgagagagaaggttgtctcaaaaattgtcaaaaattaattgtataaatatcatttctc 40693694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 44272821 - 44272882
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||| |||| || ||| |||||| ||||| |||||||||||||||    
T  44272821 agtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctct 44272882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 52263889 - 52263950
Alignment:
Q  29 agtatgagagaaaaaattgttc-aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||||  ||||||||||| ||||| |||||||||||||||| ||||    
T  52263889 agtatgagagagaaagttgttataaaaattatcaaaaaatgattgtataaatatcatgtctc 52263950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 52697527 - 52697482
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||    
T  52697527 ttgtttaaaaattattaaaaaatgattgtataaatatcatttctct 52697482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 53384338 - 53384399
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| ||||| |||||||| ||||| |||| ||||| | |||||| |||||||||||||||    
T  53384338 agtataagagagaaaattgtacaaaagttattacaaattgattgtacaaatatcatttctct 53384399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 4972016 - 4972076
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||| |||| ||||  |||||| ||| ||  |||||||||||||    
T  4972016 agtatgagagaaaaaattgttaaaaagttatagcaaaatgattataccaatatcatttctc 4972076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 7037495 - 7037555
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||| ||||| || ||||||| |  ||||| ||||||||||||||    
T  7037495 agtatgagagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 7037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 8681001 - 8680941
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| |||||| ||||||| |||  ||||| ||||||||||||||    
T  8681001 agtatgagagagaaagttgtccaaaaaatatcacataatggttgtacaaatatcatttctc 8680941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 20632659 - 20632719
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| || | ||||| |||||| |||||  ||||||||||||||||||||    
T  20632659 agtatgagagagaaagttatgcaaaagttatcaaaaaatggttgtataaatatcatttctc 20632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 31559599 - 31559535
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||||||||  |||  ||||||| ||||| |||||| |||||||||||||||||    
T  31559599 agtatgagagagaaaattgtcacaactattatcaaaaaatgattgtacaaatatcatttctctat 31559535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 39010129 - 39010213
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||| ||||||| ||||| ||||||||||| |||  |||  |||| || |||||||||  ||||| |||||||||||||| ||||    
T  39010129 atgataagaacatcatttgagtatgagagagaaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctcaatat 39010213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 41262355 - 41262415
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttct 88  Q
    |||| |||||| ||||||||| |||||||| ||| |||||| |||| ||||||||||||||    
T  41262355 agtaagagagagaaaattgttgcaaaaattgtcaaaaaatagttgtttaaatatcatttct 41262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 41495073 - 41495009
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||| ||||| |||||| | ||||| || ||||| |||| ||||| ||||||||||||||||||    
T  41495073 agtataagagataaaattttccaaaagttgtcacataatagttgtacaaatatcatttctctata 41495009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 44170619 - 44170691
Alignment:
Q  18 aacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||| ||| |||||||| |||| ||| ||||  ||||||||| |||||||  ||||| |||||||||||||||    
T  44170619 aacatcatataagtatgtgagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctct 44170691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 45176746 - 45176806
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||| ||| || || ||||||| | |||||||||||||| ||||||||||||||    
T  45176746 agtatgaaagagaaagttattaaaaaattgtaacaaaataattgtacaaatatcatttctc 45176806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 47998656 - 47998592
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||||||| ||||  |||| || | |||||||  ||||| ||||||||||||||||    
T  47998656 taagtatgagagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctcta 47998592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 51107454 - 51107514
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| ||| |||| ||||||||||   ||||| |||||| ||||||||||||||||    
T  51107454 tatgagagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctcta 51107514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 55996482 - 55996422
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||||||  ||||||| | | ||||| |||||| ||||||||||||||    
T  55996482 agtatgagagagaaaattgtcaaaaaattgttagaaaatgattgtacaaatatcatttctc 55996422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 45350106 - 45350166
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  45350106 agtatgagagaaaaaattatctaaaaattatcacaaaataattgtacaaatatcatttctc 45350166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 36669381 - 36669442
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||| |||| |||||||||||||||| | |||||| |||||||||||||||    
T  36669381 agtatgagagaaaaagttgtacaaaaattatcacaaattgattgtacaaatatcatttctct 36669442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 586961 - 586898
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||| ||||  ||||||||||||||| | |||||| |||||||||||||||    
T  586961 taagtatgagagaaaaagttgtctaaaaattatcacaaagtgattgtacaaatatcatttctct 586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 26585186 - 26585245
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||| |||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  26585186 tatgagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttctct 26585245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 7371957 - 7372023
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||||||| |||||||| |||||||| ||| ||| || ||||| ||||||||||||||||||    
T  7371957 taagtatgagagagaaaattgtacaaaaattgtcataaattagttgtacaaatatcatttctctata 7372023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 6812114 - 6812163
Alignment:
Q  39 aaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  6812114 aaaaaattatacaaaaattatcacaaaataattatataaatatcatttct 6812163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 26101433 - 26101392
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  26101433 caaaaattatcacaaaataattgtacaaatatcatttctcta 26101392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 26501369 - 26501292
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||| ||| ||||||||||||| ||| |||| ||||| |||| |||||||  ||||| |||||||||||||||||    
T  26501369 aagaacatcatgtaagtatgagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctctat 26501292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 41885781 - 41885720
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||  ||||||||  ||||| |||||||||||||||||| |||||||||||||||    
T  41885781 agtatgagagtgaaaattgtataaaaactatcacaaaataattgtacaaatatcatttctct 41885720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 41608768 - 41608728
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  41608768 caaaaattatcacaaaataatagtataaatatcatttctct 41608728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 26547292 - 26547233
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||| ||||||||||||| ||||||||||  |||| |||||||||||||||    
T  26547292 tatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcatttctct 26547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 45424063 - 45424102
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  45424063 caaaaattatcacaaaataattgtataaatatcgtttctc 45424102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 27563544 - 27563482
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||||||||  |||||||||  |||||| |||||| ||||||||||||||||    
T  27563544 agtatgagagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcatttctcta 27563482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 32938921 - 32938859
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||||| ||| ||||| ||||||| ||||||| |||||||| ||||||||||||||    
T  32938921 taagtataagagagaaagttgttaaaaaattgtcacaaattaattgtacaaatatcatttctc 32938859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 40238496 - 40238438
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||| |||| || ||| ||||| |||||| ||||||||||||||    
T  40238496 tatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcatttctc 40238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 7078511 - 7078572
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||||||||| || ||||||||||  |||| |||||||||||||||    
T  7078511 agtatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcatttctct 7078572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 13362615 - 13362676
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||||||| ||| ||||| ||||||| |||||||||||||| | |||||| ||||||    
T  13362615 taagtatgagagagaaagttgtttaaaaattgtcacaaaataattgaacaaatattatttct 13362676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 23554811 - 23554750
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||| ||||||||||| |||||  ||||| |||||||||||||||    
T  23554811 agtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcatttctct 23554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 25994943 - 25994984
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  25994943 ttgtccaaaaattatcacaaaataattgtacaaatatcattt 25994984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 27352690 - 27352629
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| ||||||||||||  ||||| |||||||||||||||    
T  27352690 agtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctct 27352629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 31703489 - 31703546
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||| ||| ||||| ||||||| ||| ||||||||||| ||||||||||||    
T  31703489 agtatgagagagaaagttgttaaaaaattgtcaaaaaataattgtctaaatatcattt 31703546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 34941931 - 34941996
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||| ||| ||||  ||||||| ||||||||| || ||| |||||||||||||||||||    
T  34941931 agtatgagagagaaagttgtctaaaaattgtcacaaaatgatagtacaaatatcatttctctatat 34941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 42615937 - 42615860
Alignment:
Q  12 gagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||| || ||||| ||||||||| ||||||| ||||  ||||||||| | ||||| |||||| ||||||||||||||    
T  42615937 gagaataaaaacatataagtatgaaagaaaaagttgtcaaaaaattattaaaaaatgattgtacaaatatcatttctc 42615860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 45042321 - 45042260
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||  ||||||| | | |||||| ||||| |||||||||||||||    
T  45042321 agtatgagagaaaaaattgtcaaaaaattgttagaaaatagttgtacaaatatcatttctct 45042260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 51168781 - 51168842
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||| ||||  |||| |||||||||||| |||||| || ||||||||||||||    
T  51168781 tatgagagaaaaagttgtctaaaagttatcacaaaatgattgtacaagtatcatttctctat 51168842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 3919360 - 3919300
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| |||||||||| |||||||  ||||| ||||||||||||||    
T  3919360 agtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 34157850 - 34157806
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| |||||||||||||||||||||| || ||||||||||||||    
T  34157850 ttgtccaaaaattatcacaaaataattatacaaatatcatttctc 34157806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 35026948 - 35026889
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||||||||||||| || ||||||||| ||||| ||| || ||||||||||||||||    
T  35026948 tatgagagaaaaaattgt-cacaaattatcataaaatgattatacaaatatcatttctcta 35026889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 39128475 - 39128407
Alignment:
Q  24 atttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    |||| ||| ||||||| ||| |||| ||||||||||  ||||||||||||| |||||| ||||||||||    
T  39128475 atttgagtgtgagagagaaagttgtccaaaaattattgcaaaataattgtacaaatataatttctctat 39128407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 40118726 - 40118786
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||| ||||||||||   ||||| |||||| ||||||||||||||    
T  40118726 agtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 40118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 43105165 - 43105105
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||||||  |||||||||   |||||||||||| ||||||||||||||    
T  43105165 agtatgagagagaaaattgtataaaaattatacaaaaataattgtacaaatatcatttctc 43105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 50528068 - 50528128
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||  |||| || ||||||| | |||||| ||||||||||||||    
T  50528068 agtatgagagaaaaaattgtctaaaagttgtcacaaattgattgtacaaatatcatttctc 50528128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 8934593 - 8934668
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||  |||||||||||||||||| | ||||  |||| || |||||||||| ||||| |||||| ||||||||    
T  8934593 aagaacattatttaagtatgagagaaatagttgtcaaaaagttgtcacaaaatagttgtacaaatataatttctct 8934668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 36794675 - 36794612
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||| ||| ||| || | ||||||||||  ||||||||||||| |||||||||||||||||    
T  36794675 agtatgaaagagaaatttatccaaaaattataccaaaataattgtacaaatatcatttctctat 36794612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 42299199 - 42299262
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||| ||||||||||  |||||||||||||||||  ||||| |||||| ||||||| ||||    
T  42299199 tatgagaaaaaaaattgtctaaaaattatcacaaaatggttgtacaaatattatttctccatat 42299262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 45863753 - 45863792
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  45863753 caaaaattatcaaaaaataattgtacaaatatcatttctc 45863792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 2854971 - 2855033
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||||||||| ||||| ||||| || ||| ||||| | |||| ||||||||||||||||    
T  2854971 agtatgagagaaaagattgtacaaaagttgtcataaaatgaatgtacaaatatcatttctcta 2855033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 5043130 - 5043096
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatt 85  Q
    |||||||||||||||||||||||| ||||||||||    
T  5043130 aaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 13078887 - 13078841
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||| |  |||||| |||||||||||||||||||||||    
T  13078887 ttgttcaaaaattgtatcaaaatgattgtataaatatcatttctcta 13078841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 30530585 - 30530647
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||| ||||  |||| || |||||||||  ||||||||||||||||||||||    
T  30530585 agtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttctcta 30530647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 37515976 - 37515914
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtat-aaatatcatttctct 90  Q
    ||||||||||| ||||||||  ||||||||||| |||||| |||||| ||||||||| |||||    
T  37515976 agtatgagagagaaaattgtcaaaaaattatcataaaatagttgtataaaatatcatatctct 37515914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 50775167 - 50775229
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  |||||||| ||| ||||||||||||||||||||||| ||||    
T  50775167 agtatgagagagaaagttgtcacaaaaattgtcaaaaaataattgtataaatatcattactct 50775229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 2827721 - 2827786
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||| ||| |||| ||||||||||  | || | |||||| |||||||||||||||||||    
T  2827721 agtatgagagagaaagttgtacaaaaattataccgaattgattgtacaaatatcatttctctatat 2827786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 8846003 - 8845966
Alignment:
Q  49 tcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  8846003 tcaaaaaatatcaaaaaataattgtataaatatcattt 8845966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 11038322 - 11038261
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||| ||| ||| |||| ||||||||||  ||||||  |||||||||||||||||||||    
T  11038322 agtatgaaagagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttctct 11038261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 11097895 - 11097956
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||||||||| || |||||||||   |||| |||||||||||||||    
T  11097895 agtatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctct 11097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 18610833 - 18610772
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  |||| || |||||||||| ||||| |||||||||||||||    
T  18610833 agtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctct 18610772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 21854475 - 21854536
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| || |  ||||||||||||| |||||||||||||||    
T  21854475 agtatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctct 21854536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 22674772 - 22674707
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||| ||| |||| |||||||| |   |||||| ||||| |||||||||||||||||||    
T  22674772 agtatgagagagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctctatat 22674707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 29489370 - 29489431
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| | ||| ||||||||||||  ||||| |||||||||||||||    
T  29489370 agtatgagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctct 29489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 29632490 - 29632433
Alignment:
Q  33 tgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||| ||||||||  ||||||| | ||||||||| |||| |||||||||||||||    
T  29632490 tgagagagaaaattgtcaaaaaattgttacaaaataaatgtacaaatatcatttctct 29632433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 35846888 - 35846953
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||| | ||| ||||  |||| |||||| |||||||| ||| |||||||||||||||||||    
T  35846888 agtatgagatagaaagttgtctaaaatttatcaaaaaataatagtacaaatatcatttctctatat 35846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 42843355 - 42843416
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| |||||||||||| | ||||| |||||| |||||  ||||| |||||||||||||||    
T  42843355 agtataagagaaaaaattatgcaaaagttatcaaaaaattgttgtacaaatatcatttctct 42843416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 43755689 - 43755750
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||| ||| ||||||||  ||||||||||| |||||  ||||| |||||||||||||||    
T  43755689 agtatgaaagagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcatttctct 43755750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 46281497 - 46281436
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| ||||  |||||||||| |||||||| ||||| ||||||||||||||    
T  46281497 agtatgagagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctc 46281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 47113334 - 47113277
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||| ||| |||| ||||||||||  |||||| |||||| |||||||||||    
T  47113334 agtatgagagagaaagttgtccaaaaattattgcaaaatgattgtacaaatatcattt 47113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 50145812 - 50145869
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||| |||||| ||||||| || |||||||||| ||||| |||||| ||||    
T  50145812 agtatgagagagaaaattattcaaaagttgtcacaaaatagttgtacaaatattattt 50145869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 835930 - 835874
Alignment:
Q  30 gtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||||| ||| |||| |||||||| | ||||||| |||||| |||||||||||    
T  835930 gtatgagagagaaagttgtacaaaaattgtaacaaaatgattgtacaaatatcattt 835874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 7648290 - 7648250
Alignment:
Q  49 tcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||| | |||||||||||||| ||||||||||||||    
T  7648290 tcaaaaattgttacaaaataattgtacaaatatcatttctc 7648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 13355081 - 13355129
Alignment:
Q  41 aaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||| |||||||||| || ||||||| ||||| ||||||||||||||    
T  13355081 aaaattattcaaaaattgtcgcaaaatagttgtaaaaatatcatttctc 13355129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 25995520 - 25995460
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| || ||||||| | |||||| ||||||||||||||    
T  25995520 agtatgagagagaaagttgtacaaaacttgtcacaaattgattgtacaaatatcatttctc 25995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 31414981 - 31414929
Alignment:
Q  39 aaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||||||||||| || |  ||||||| ||||||||||| ||||||||||    
T  31414981 aaaaaattgttcaaaagttgtttcaaaatagttgtataaataacatttctcta 31414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 32821695 - 32821635
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||||||| |||| || ||||||| |  ||||| ||||||||||||||    
T  32821695 agtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttctc 32821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 32873401 - 32873337
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||| |||| ||||| ||||| |||||| |||||   |||| ||||||||||||||||||    
T  32873401 agtatgagataaaagattgtacaaaagttatcataaaatggatgtacaaatatcatttctctata 32873337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 32966324 - 32966268
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||||||||| || ||||||| ||||||| |  ||||| |||||||||||||    
T  32966324 atgagagaaaaaattatttaaaaattgtcacaaagtggttgtacaaatatcatttct 32966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 34157579 - 34157516
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||||| ||| ||||| ||||||||| | |||||  ||||| ||||||||||||||||||    
T  34157579 agtatgagagataaagttgttaaaaaattatta-aaaatggttgtacaaatatcatttctctata 34157516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 43457832 - 43457892
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| ||| |||| ||||| ||||| ||||||  ||||| ||||||||||||||||    
T  43457832 tatgagagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctcta 43457892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 46902671 - 46902611
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| ||| |||| |||||||| |||||||||| || || || |||||||||||||    
T  46902671 tatgagagagaaagttgtccaaaaattgtcacaaaatagttatacaagtatcatttctcta 46902611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 49621423 - 49621363
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| ||||  ||||||||| |||||||  ||||| ||||||||||||||    
T  49621423 agtatgagagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttctc 49621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 51703465 - 51703524
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaa-ttatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||||||||  ||||| |||||||||| | ||||||||||||||||||||||    
T  51703465 tatgagagataaaattgtcaaaaaagttatcacaaa-tgattgtataaatatcatttctct 51703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 44712040 - 44711977
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||||||    
T  44712040 taagtatgagagagaaaattgtcaaaaaattattacaaattaattgtataaatatcatttctct 44711977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 43186356 - 43186298
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttc 87  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  43186356 agtatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6806982 - 6806909
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    |||||| |||| | ||||||||||||||||||||| |||| || ||||||||| |||||| |||||||||||||    
T  6806982 aagaacgacatgtgagtatgagagaaaaaattgtttaaaagttgtcacaaaatgattgtacaaatatcatttct 6806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 20065678 - 20065621
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcat 84  Q
    ||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||    
T  20065678 taagtatgagagagaaaattgtcaaaaaattatcacaaaattattgtataaatatcat 20065621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29913635 - 29913559
Alignment:
Q  18 aacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||| ||| ||| ||| ||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||| ||||    
T  29913635 aacatcatataaatataagagaaaaaattgtttaaaaattatcataaaatagttgtacaaatatcatttctcgatat 29913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 23952568 - 23952493
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| | ||||||| | | |||||||| ||||| | ||||||||||||||||| |||||||||||||||    
T  23952568 aagaacaacatgtgagtatgaaaaagaaaattgtacaaaagtcatcacaaaataattgtacaaatatcatttctct 23952493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 36064090 - 36064027
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| |||||||| ||||| || ||||||||| |||||| |||||||||||||||||    
T  36064090 agtatgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcatttctctat 36064027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 12697728 - 12697781
Alignment:
Q  33 tgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||| ||| ||||||||||||||||| |||||| |||||||||||||||||    
T  12697728 tgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcattt 12697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 32725791 - 32725852
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||  ||||||||||||||| |  ||||| |||||||||||||||    
T  32725791 agtatgagagaaaaaattgtctaaaaattatcacaaagtggttgtacaaatatcatttctct 32725852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 14228781 - 14228705
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||| ||| | ||||||||||| ||| |||| ||||| ||||||||||||| ||||| ||||||||||| ||||    
T  14228781 aagaacatcatgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttttcta 14228705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 33115960 - 33115904
Alignment:
Q  35 agagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||    
T  33115960 agagaaaaaatcgttacaaaaattatcacaaaataattatacaaatatcatttctct 33115904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 40614203 - 40614259
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttc 87  Q
    ||||||||| | ||||||||||||||||||| ||| || ||||||||||||||||||    
T  40614203 tatgagagatataattgttcaaaaattatcataaagtagttgtataaatatcatttc 40614259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 8955697 - 8955760
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| |||| |||||||  ||||||||||||||||| ||||| ||||||| ||||||||    
T  8955697 taagtatgaaagaagaaattgtctaaaaattatcacaaaatgattgtttaaatattatttctct 8955760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 3893409 - 3893466
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||||| ||||||||||||| |  ||||||| ||||| |||||||||||    
T  3893409 agtatgagagaaaaagttgttcaaaaattgtaccaaaatagttgtacaaatatcattt 3893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 28927741 - 28927680
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||| |||| || ||||||| |  ||||| |||||||||||||||    
T  28927741 agtatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctct 28927680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 41406867 - 41406927
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| ||||| ||||||| ||| ||||| |||||| ||||||||||||||    
T  41406867 agtatgagagagaaagttgttaaaaaattgtcaaaaaatgattgtacaaatatcatttctc 41406927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 3650173 - 3650110
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| ||||| ||||||||| ||||| |  ||||| |||||||||||||||||    
T  3650173 agtatgagagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttctctat 3650110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 13884395 - 13884316
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| ||||||| ||| ||||||||||||||||| || ||||||| || | |||||||  ||||| ||||||| ||||||    
T  13884395 atgataagaacatcatgtaagtatgagagaaaaagttattcaaaagttgttacaaaatcgttgtacaaatatcttttctc 13884316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 5697714 - 5697676
Alignment:
Q  52 aaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  5697714 aaaattgtcacaaaataattgtttaaatatcatttctct 5697676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14531695 - 14531621
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||| | ||||||| ||| ||| |||| ||||| |||||| |||||| ||||| ||||||||||||||    
T  14531695 aagaacatcatcttagtatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttctc 14531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 30927942 - 30928004
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||| |||| |||||||| ||||||| |  ||||| ||||||||||||||||    
T  30927942 agtatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttctcta 30928004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 34578386 - 34578452
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||||||| |||||||||||||| || |   |||||  ||||| ||||||||||||||||||    
T  34578386 taagtatgagagataaaattgttcaaaagttgtacaaaaatggttgtacaaatatcatttctctata 34578452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 37784385 - 37784447
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| |||||||| ||||| ||||  ||||||  ||||| ||||||||||||||||    
T  37784385 agtatgagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctcta 37784447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 6005004 - 6004943
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  ||||||| ||||||| || ||||| |||||||||||||||    
T  6005004 agtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcatttctct 6004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 33863259 - 33863320
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||  ||||||||||| |||||  ||||| | |||||||||||||    
T  33863259 agtatgagagataaaattgtctaaaaattatcagaaaatggttgtacatatatcatttctct 33863320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 40089853 - 40089898
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||| |||||||||||||||||||||| || |||||||||| ||||    
T  40089853 ttgtacaaaaattatcacaaaataattataaaaatatcattactct 40089898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 42012601 - 42012662
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  |||| |||||| ||| || |||||||||||||||||||||    
T  42012601 agtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttctct 42012662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 1158346 - 1158410
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||||||||| ||| |||||||||| |||| | ||| |  ||||| ||||||||||||||||||    
T  1158346 agtatgagagagaaagttgttcaaaagttattagaaattggttgtacaaatatcatttctctata 1158410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 2621824 - 2621784
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  2621824 caaaagttatcacaaattagttgtataaatatcatttctct 2621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 10344384 - 10344324
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| |||||||||| | ||||||  |||| ||||||||||||||    
T  10344384 agtatgagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctc 10344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 39031224 - 39031280
Alignment:
Q  31 tatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||| ||||||||| ||||| |||| | |||||||||||| |||||||||||    
T  39031224 tatgagagagaaaattgtttcaaaagttataaaaaaataattgtacaaatatcattt 39031280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 40608573 - 40608513
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||  ||||||| | | ||| | |||||| ||||||||||||||    
T  40608573 agtatgagagaaaaaattgtcaaaaaattgttagaaattgattgtacaaatatcatttctc 40608513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 582878 - 582941
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||||||||| |||| ||||||||||||| ||||| |||||||||||||||||    
T  582878 agtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcatttctctat 582941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 27440539 - 27440479
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||||||||| || ||||||||| |||||| ||||||||||||||    
T  27440539 agtatgagagagaaaattgttcaaaagttgtcacaaaatgattgtacaaatatcatttctc 27440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 27005495 - 27005552
Alignment:
Q  34 gagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||    
T  27005495 gagagataaagttgtacaaaaattatcaaaaaataattgtacaaatatcatttctcta 27005552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 35464606 - 35464655
Alignment:
Q  41 aaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  35464606 aaaattgttcaaaaattatcaaaaaataatcgtacaaatatcatttctct 35464655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 38010932 - 38010872
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||| ||||| |||||||||| | |||||| ||||||||||||||    
T  38010932 agtatgagagagaaaattgtacaaaagttatcacaaattgattgtacaaatatcatttctc 38010872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 8787169 - 8787232
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    ||||||||||||| ||||  |||||||||||| ||||  ||||| |||||||||||||||||||    
T  8787169 tatgagagaaaaacttgtcaaaaaattatcactaaattgttgtacaaatatcatttctctatat 8787232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 22402637 - 22402700
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||||  |||||||||| || ||||||||||| |||  |||||||||||||||||    
T  22402637 agtatgagagaaaatgttgttcaaaagttgtcacaaaataaatgttcaaatatcatttctctat 22402700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 34216526 - 34216585
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||||||  || |||| |||||||||| ||||||||||||| ||||||||||||||    
T  34216526 taagtatgagaacaataattattcaaaaattgtcacaaaataattatataaatatcattt 34216585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 3167376 - 3167322
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||| ||||||||||||||||||||||| | |||||| ||||||||||| |||||    
T  3167376 atgaaagaaaaaattgttcaaaaattataataaaatagttgtataaataacattt 3167322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 6538908 - 6538870
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6538908 aaaaattatcacaaaataattgtacaaatatcatttctc 6538870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 7927392 - 7927354
Alignment:
Q  52 aaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  7927392 aaaattatcacaaaatgattgtataaatatcatttctct 7927354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 18004283 - 18004329
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||    
T  18004283 ttgtccaaaaattatctcaaaattattgtataaatatcatttctcta 18004329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 19981996 - 19982058
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||  |||||||||||||||    
T  19981996 agtatgagagaaaaaattgtcacaaaaattatcaaaaaatgattgttaaaatatcatttctct 19982058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 21018097 - 21018051
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  21018097 ttgtttaaaaattatcataaaataattgtataaatatcatttttcta 21018051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 35098743 - 35098809
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatatc 95  Q
    ||||||||||||||||||||| |||  |||||| |||||  ||||| ||||||||||||||| ||||    
T  35098743 agtatgagagaaaaaattgtttaaatgttatcaaaaaatggttgtacaaatatcatttctctttatc 35098809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 17489408 - 17489351
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||| ||||||||  ||||||||||| |||||| ||||| |||||||||||    
T  17489408 agtatgagagagaaaattgtgtaaaaattatcaaaaaatagttgtacaaatatcattt 17489351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 31626087 - 31626148
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||||| |||| ||||||||||  |||||| |||||| |||||||||||||||    
T  31626087 agtatgagataaaaagttgtacaaaaattataccaaaatgattgtacaaatatcatttctct 31626148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 3263519 - 3263579
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||||||| ||||| || ||||||| |  ||||| ||||||||||||||    
T  3263519 agtatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 6529079 - 6529019
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||| ||||  ||||||| | | |||||||||||| ||||||||||||||    
T  6529079 agtatgagagaaaaagttgtcaaaaaattgttagaaaataattgtacaaatatcatttctc 6529019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 18511804 - 18511868
Alignment:
Q  27 taagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||| ||||||||  |||||||||||||||||| | |||  |||||||||||||||    
T  18511804 taagtatgagagagaaaattgtagcaaaaattatcacaaaatgaatgttcaaatatcatttctct 18511868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 24077856 - 24077900
Alignment:
Q  43 aattgttcaaaaattatcacaaaataattgtataaatatcatttc 87  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  24077856 aattgtttaaaaattatcacataataattatataaatatcatttc 24077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 25345397 - 25345337
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    |||||||| ||| || | |||||||||||| ||| |||||||| |||||||||||||||||    
T  25345397 atgagagataaagttatacaaaaattatcataaattaattgtacaaatatcatttctctat 25345337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 41460176 - 41460116
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| ||||| |||| || ||| ||||| |||||||||||||||||||||    
T  41460176 agtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcatttctc 41460116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 5821620 - 5821682
Alignment:
Q  27 taagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||||| |||||||| |||| |||| | ||| |||||||||||||||    
T  5821620 taagtatgagagaaaaaattgttgcaaaaattgtcactaaatga-tgtttaaatatcatttctc 5821682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 26686920 - 26686881
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  26686920 caaaaattattaaaaaataattgtataaatatcatttctc 26686881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 26956651 - 26956612
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  26956651 caaaaattattaaaaaataattgtataaatatcatttctc 26956612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 4954526 - 4954464
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||| |||| || || || ||||||| |||||||| ||||||||||||||||    
T  4954526 agtatgagagagaaagttgtacataagttgtcacaaattaattgtacaaatatcatttctcta 4954464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 19980479 - 19980437
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  19980479 caaaaattatcataaaatagttgtataaatatgatttctctat 19980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 27340929 - 27340867
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||||||||  ||||||||| | ||| | |||||| ||||||||||||||||    
T  27340929 agtatgagagagaaaattgtcaaaaaattataataaagtgattgtacaaatatcatttctcta 27340867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 30420688 - 30420626
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||| || ||||| |||||||||||| |||||   |||| ||||||||||||||    
T  30420688 taagtatgagagagaagattgtacaaaaattatcataaaatggatgtacaaatatcatttctc 30420626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 7144637 - 7144576
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||| |||| |||||| |||||  ||||| |||||||||||||||    
T  7144637 agtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttctct 7144576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 19983905 - 19983841
Alignment:
Q  24 atttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||| | | ||||  ||||||| ||| |||||||||||| ||||||||||||||    
T  19983905 atttaagtatgagagagatagttgta-aaaaattgtcataaaataattgtacaaatatcatttctc 19983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 21353550 - 21353587
Alignment:
Q  53 aaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||||||||||||||||| || ||||||||||||    
T  21353550 aaattatcacaaaataattgtacaagtatcatttctct 21353587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 24329993 - 24330054
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| || |  ||||||||||||| |||||||||||||||    
T  24329993 agtatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctct 24330054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 30103464 - 30103521
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||| |||||||| ||||||||||   ||||| |||||| |||||||||||||    
T  30103464 tatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 34693227 - 34693288
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| || ||||| ||||||||||   ||||| |||||| |||||||||||||||    
T  34693227 agtatgagagagaagattgtacaaaaattatacaaaaatgattgtacaaatatcatttctct 34693288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 40829475 - 40829414
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||  |||||||||| | |||||  ||||| ||||||||||||||    
T  40829475 agtatgagagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcatttctc 40829414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 15918001 - 15918061
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| || | ||||| || ||||||| |||||||| ||||||||||||||    
T  15918001 agtatgagagataaagttatacaaaagttgtcacaaattaattgtacaaatatcatttctc 15918061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 17063925 - 17063865
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| ||||| |||| || ||| ||||| |||||| ||||||||||||||    
T  17063925 agtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtacaaatatcatttctc 17063865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 17247797 - 17247837
Alignment:
Q  48 ttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||| ||||||||||||||||| | |||||||||||||    
T  17247797 ttcaaaagttatcacaaaataattgcagaaatatcatttct 17247837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 43493721 - 43493689
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatc 82  Q
    |||||||||||| ||||||||||||||||||||    
T  43493721 caaaaattatcataaaataattgtataaatatc 43493689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 3401144 - 3401082
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||    
T  3401144 agtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 3401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 12501553 - 12501475
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    |||| ||||||| ||| |||||||| |||| ||| ||||| ||||||| |||||||||||||||| |||||||||||||    
T  12501553 atgaaaagaacatcatataagtatgtgagagaaagttgtttaaaaattgtcacaaaataattgtacaaatatcatttct 12501475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 1434677 - 1434732
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||||||||  ||||||||||||||| |||||||| |||||||||||    
T  1434677 tatgagagaaaaaattgtcaaaaaattatcacaaattaattgtacaaatatcattt 1434732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 11742993 - 11743054
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||||||  ||||||||||| |||||| ||||| |||||| ||||||||    
T  11742993 agtatgagagaaaaaattgtctaaaaattatcaaaaaatagttgtacaaatattatttctct 11743054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 23775970 - 23776005
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  23775970 aaaaattatcacaaaataattgtataaatatcattt 23776005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 26839511 - 26839574
Alignment:
Q  27 taagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||| |||   |||||||||| |||||||||||||||||||||| ||||||    
T  26839511 taagtatgagagaaaaacttgggacaaaaattattacaaaataattgtataaatatcgtttctc 26839574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 29197782 - 29197727
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||| |||||||| |||||||||||||||||| |||||| |||||| ||||    
T  29197782 tatgagagagaaaattgtccaaaaattatcacaaaatgattgtacaaatattattt 29197727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 9851312 - 9851374
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||||||||||||| |  ||| ||||||||||||| |||||| |||| |||||||||||    
T  9851312 agtatgagagaaaaaattatcaaaatattatcacaaaatgattgtacaaatttcatttctcta 9851374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 10521186 - 10521124
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| |||||| |  |||| |||||||||| |||||||| ||||||||||||||||    
T  10521186 agtatgagagataaaattatcaaaaagttatcacaaagtaattgtacaaatatcatttctcta 10521124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 12500024 - 12500098
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||| |||||||| |||||||| || || ||||||| ||||||||| |||||  ||||||||||||||    
T  12500024 aagaacatcatataagtatgtgagaaaaagttatttaaaaattgtcacaaaatgattgtgcaaatatcatttctc 12500098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 12507353 - 12507427
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||| |||||||| |||||||| || || ||||||| ||||||||| |||||  ||||||||||||||    
T  12507353 aagaacatcatataagtatgtgagaaaaagttatttaaaaattgtcacaaaatgattgtgcaaatatcatttctc 12507427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 12508877 - 12508803
Alignment:
Q  15 aagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||| |||||||| |||||||| || || ||||||| ||||||||| |||||  ||||||||||||||    
T  12508877 aagaacatcatataagtatgtgagaaaaagttatttaaaaattgtcacaaaatgattgtgcaaatatcatttctc 12508803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 17417246 - 17417307
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| |||||||| ||||| ||| |||||| |||||||||||||||    
T  17417246 agtatgagagagaaagttgtccaaaaattgtcacataatgattgtacaaatatcatttctct 17417307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 32784809 - 32784738
Alignment:
Q  18 aacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| ||| ||||||||| ||||||| ||||  |||| || | |||||||||||||| ||||||||||||||    
T  32784809 aacatcatataagtatgaaagaaaaagttgtcaaaaagttgtaacaaaataattgtacaaatatcatttctc 32784738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 3373810 - 3373776
Alignment:
Q  52 aaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||||||| |||||||||||||||||    
T  3373810 aaaattatcacaaaatagttgtataaatatcattt 3373776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 26396502 - 26396548
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  26396502 ttgtttaaaaattattataaaataattgtacaaatatcatttctcta 26396548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 27102177 - 27102115
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||||||||||||||  ||||||||| | |||||  ||||| ||||||||||||||    
T  27102177 taagtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 27143999 - 27143937
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||| ||||||||||||||  ||||||||| | |||||  ||||| ||||||||||||||    
T  27143999 taagtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 3339510 - 3339571
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| || |||||||||  ||||| |||||||||||||||    
T  3339510 agtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctct 3339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 12044392 - 12044331
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  |||| || ||| |||||| |||||||||||||||||||||    
T  12044392 agtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcatttctct 12044331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 3660364 - 3660424
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||||||| ||||| || ||||||| |  ||||| |||||| |||||||    
T  3660364 agtatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatataatttctc 3660424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 9849926 - 9849890
Alignment:
Q  55 attatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||||||||||||||| |||| |||||||||||    
T  9849926 attatcacaaaataattgtagaaatttcatttctcta 9849890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 12277897 - 12277973
Alignment:
Q  10 atgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||| ||||||| ||| ||| | ||||||| |||||||||||||| |  |||  ||||||||||| |||||||||||    
T  12277897 atgataagaacatcatgtaaatttgagagagaaaattgttcaaaattcgtcagtaaataattgtagaaatatcattt 12277973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 25995502 - 25995442
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||||||  ||||||||  ||||| ||||||||||||||    
T  25995502 agtatgagagagaaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttctc 25995442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 26094965 - 26094905
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||||||  ||||||||  ||||| ||||||||||||||    
T  26094965 agtatgagagataaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttctc 26094905  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 29705963 - 29705901
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||| ||| |||||| |  |||||||||||||||||||||||||||||||||||||||||    
T  29705963 agtatgaaagagaaaattatcaaaaaattatcacaaaataattgtataaatatcatttctcta 29705901  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 1295392 - 1295332
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  1295392 agtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

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Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 4189785 - 4189737
Alignment:
Q  41 aaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  4189785 aaaattgttcaaaaattatcacaaaataattctacaaatatcatttctc 4189737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 29800558 - 29800621
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||||||| ||||  ||||||||||||||| || ||||| |||||||||||||||    
T  29800558 taagtatgagagaaaaagttgtctaaaaattatcacaaagtagttgtacaaatatcatttctct 29800621  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 34663079 - 34663142
Alignment:
Q  26 ttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| ||||||||| |||||  |||||||||||||| |||||| ||||||||||||||||||||    
T  34663079 ttaaatatgagagagaaaatcattcaaaaattatcataaaatatttgtataaatatcatttctc 34663142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 29222422 - 29222468
Alignment:
Q  40 aaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  29222422 aaaaattgttcaaaaattatcataaaatgattgtataaatatcattt 29222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 38693580 - 38693638
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||| |||||||| |||||||||||||| |||||||||  ||||||||||||||    
T  38693580 tatgagagagaaaattgtccaaaaattatcacataataattgtgcaaatatcatttctc 38693638  T

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Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 21239097 - 21239154
Alignment:
Q  37 agaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||||||||| |||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  21239097 agaaaaaattattcaaaaattatcataaaatagttgtacaaatatcatttctcgatat 21239154  T

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Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 27198171 - 27198232
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||| |||| |||||| ||||| |||||| |||||||||||||||    
T  27198171 agtatgagagataaaattgtttaaaagttatcaaaaaatgattgtacaaatatcatttctct 27198232  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 40419655 - 40419712
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||| ||||||||  ||||||||||||||||| |||||| |||||||||||||    
T  40419655 tatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 40499816 - 40499732
Alignment:
Q  9 aatgagaagaacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctata 93  Q
    ||||| ||||||||||| |  |||| ||||||||||||||| |||| || ||| ||||||||| || ||||||||||||| ||||    
T  40499816 aatgataagaacaacatgttggtataagagaaaaaattgttaaaaagttgtcataaaataattatacaaatatcatttctttata 40499732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 45902401 - 45902465
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||| |||||||||||||| |||| ||||||| |||||  |||||| |||||||||    
T  45902401 taagtatgagagataaaattgttcaaaatttattacaaaatgattgtgcaaatattatttctcta 45902465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 33074934 - 33074871
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||||| |||| ||||||||||  |||||| |||||| ||||||| |||||||||    
T  33074934 agtatgagagaaaaagttgtacaaaaattataccaaaattattgtacaaatatcctttctctat 33074871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 38944152 - 38944215
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| |||||||| ||||| || ||||||| || ||||| |||||||||||||||||    
T  38944152 agtatgagagagaaaattgtacaaaagttgtcacaaattagttgtacaaatatcatttctctat 38944215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 53473667 - 53473609
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||||||| |||| ||||| |||||||||| | |||||| |||||||||||||||    
T  53473667 atgagagaaaaagttgtacaaaagttatcacaaattgattgtacaaatatcatttctct 53473609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 7867722 - 7867783
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| | ||||||||| |||| || |||||||||| ||||| |||||||||||||||    
T  7867722 agtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcatttctct 7867783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 9582192 - 9582233
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  9582192 aaaaattatcataaagtaattgtataaatatcatttctctat 9582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 16267908 - 16267969
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||||||||||||| | ||||| ||| || |||||||||||||||    
T  16267908 agtatgagagagaaagttgttcaaaaattattagaaaatgattatacaaatatcatttctct 16267969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 36799458 - 36799397
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| | ||||||||| |||| |||||| |||||| ||||| |||||||||||||||    
T  36799458 agtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcatttctct 36799397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 884585 - 884533
Alignment:
Q  38 gaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| | |||||||| |||||||| ||||| |||||||||||||||    
T  884585 gaaaaaattgtaccaaaattataacaaaatagttgtacaaatatcatttctct 884533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 1208006 - 1207946
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||||||| | || ||||| |||| ||||| ||||||||||||||    
T  1208006 agtatgagagataaaattgttcaacagttgtcacataatagttgtacaaatatcatttctc 1207946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 42249453 - 42249405
Alignment:
Q  41 aaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||| | |||||||| |||||||||||| ||||||||||||||||||    
T  42249453 aaaattctccaaaaattgtcacaaaataatagtataaatatcatttctc 42249405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 48205105 - 48205045
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||| ||||||||||   ||||| |||||| ||||||||||||||    
T  48205105 agtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 49031556 - 49031616
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    |||||||||||| ||||| |||| ||||||| |||| |||||| ||||||||||| |||||    
T  49031556 atgagagaaaaagttgtttaaaagttatcacgaaatgattgtacaaatatcatttttctat 49031616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 7351649 - 7351712
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| |||||||| ||||||||||   |||||  ||||| |||||||||||||||||    
T  7351649 agtatgagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctctat 7351712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 27646555 - 27646496
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||| ||| |||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  27646555 atgagagataaagttgtccaaaaattattgcaaaatgattgtacaaatatcatttctcta 27646496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 45150277 - 45150340
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| ||||  |||| || |||||||||| |||||||| ||||||||||||||    
T  45150277 agtatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcatttctctat 45150340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 46344472 - 46344413
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| |||||||| |||||||| | ||||| || ||||| |||||||||||||||    
T  46344472 tatgagagagaaaattgtacaaaaattgtaacaaattagttgtacaaatatcatttctct 46344413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 14957894 - 14957836
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||||||| |||| || ||||||| |  ||||| ||||||||||||||    
T  14957894 tatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 24489684 - 24489642
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||||||||||||||  || ||||||||||||||    
T  24489684 caaaaattatcacaaaataattgttaaattatcatttctctat 24489642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 32596188 - 32596234
Alignment:
Q  43 aattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||| |||||||||| |||||||||||||| ||||||||| ||||    
T  32596188 aattgtccaaaaattattacaaaataattgtacaaatatcatctctc 32596234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 32622396 - 32622434
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  32622396 aaaaattatcaaaaaatgattgtataaatatcatttctc 32622434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 39901652 - 39901590
Alignment:
Q  29 agtatgagagaaaaaattgttc-aaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| | ||| |||||| ||||||||||| ||||| |||||| |||||||||||||||    
T  39901652 agtatgagatagaaagttgttccaaaaattatcaaaaaatgattgtacaaatatcatttctct 39901590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 41717323 - 41717261
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| | ||| ||||| |||| || |||| ||||||||||| ||||||||||||||||    
T  41717323 agtatgagatagaaagttgtttaaaagttgtcactaaataattgtacaaatatcatttctcta 41717261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 42755715 - 42755653
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||||||||| |||| || ||| ||||  |||||| ||||||||||||||||    
T  42755715 agtatgagagagaaaattgtttaaaagttgtcaaaaaaatattgtacaaatatcatttctcta 42755653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 7225 - 7286
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| ||||| || ||| ||||| |||||| |||||||||||||||    
T  7225 agtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcatttctct 7286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 9557933 - 9557994
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| |||||||| |  ||||||  |||||||||||||||||||||    
T  9557933 agtatgagagagaaagttgtacaaaaattgtatcaaaattgttgtataaatatcatttctct 9557994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 35376562 - 35376623
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  ||||||| |||||||||  ||||| |||||||||||||||    
T  35376562 agtatgagagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctct 35376623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 53932402 - 53932463
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||  ||| |||| |||||||| |||||||||  ||||| |||||||||||||||    
T  53932402 agtatgagagtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctct 53932463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 11327168 - 11327108
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| || |||||||||  ||||| ||||||||||||||    
T  11327168 agtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 12094400 - 12094460
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| | | || || ||||||| ||| |||||| ||||||||||||||||||||    
T  12094400 agtatgagagagacattttttaaaaaattgtcataaaatagttgtataaatatcatttctc 12094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 13159721 - 13159661
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| || ||||||| |||||||| | ||||||||||||    
T  13159721 agtatgagagagaaagttgtacaaaagttgtcacaaattaattgtacagatatcatttctc 13159661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 20096433 - 20096493
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| ||| ||||  ||| ||||||| ||||||||| || ||||||||||||||||    
T  20096433 tatgagagagaaagttgtcaaaatattatcataaaataattatacaaatatcatttctcta 20096493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 22836207 - 22836263
Alignment:
Q  31 tatgagagaaaa-aattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||||||| ||||||| ||||||||||| |||||  ||||| |||||||||||    
T  22836207 tatgagagaaaaaaattgttgaaaaattatcataaaatggttgtacaaatatcattt 22836263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 41309060 - 41309000
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||||||||| ||||||| ||||||| |  ||||| ||||||||| ||||    
T  41309060 agtatgagagagaaaattgttaaaaaattgtcacaaagtggttgtacaaatatcatatctc 41309000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 43441732 - 43441672
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||  |||| ||||||||||||| ||||| |||  ||||| ||||||||||||||    
T  43441732 agtatgagaacaaaagttgttcaaaaattgtcacataatggttgtacaaatatcatttctc 43441672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 47141611 - 47141671
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||||||||  ||||||  ||||| ||||||||||||||    
T  47141611 agtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 47141671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 48049973 - 48049933
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||| |||||| ||||||||||||||||||| |||||||||    
T  48049973 aaaagttatcaaaaaataattgtataaatataatttctcta 48049933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 48789388 - 48789328
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||| ||||| ||||  |||||||||||| |||||||||||  |||||||||||||    
T  48789388 agtatgagataaaaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 49167697 - 49167741
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||    
T  49167697 ttgttaaaaaattatcacaaaataggtgtagaaatatcatttctc 49167741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 50559220 - 50559284
Alignment:
Q  27 taagtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||||| ||||||||  ||||| || ||| |||||| ||||| |||||||||||||||    
T  50559220 taagtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttctct 50559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 53133964 - 53134028
Alignment:
Q  30 gtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctatat 94  Q
    |||||||||| ||| ||||| ||||||||| | |||||  || || |||||||||||||||||||    
T  53133964 gtatgagagagaaagttgttaaaaaattattataaaatggttttacaaatatcatttctctatat 53134028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 4963791 - 4963839
Alignment:
Q  33 tgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatat 81  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  4963791 tgagagaaaaaattgttcaaaaattatcacaaaataatcgtaaaaatat 4963839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 37355189 - 37355132
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| ||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  37355189 atgaaagagaaagttgttcaaaaattatcataaaataattgtataaatattatttctc 37355132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 43255578 - 43255639
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| | |||||||| |||||||| |||||||||||||||| |||||||||| ||||    
T  43255578 agtatgagaaagaaaattgtacaaaaattgtcacaaaataattgtacaaatatcattactct 43255639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 10014966 - 10015025
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||||||||| |||| |||| ||||||| |||||| ||||| |||||||||||||    
T  10014966 agtatgagagaaaaagttgtccaaatattatcataaaatagttgtacaaatatcatttct 10015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 13437258 - 13437195
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||||| |||||||||| || |||||||||  ||||  |||||||||||||||||    
T  13437258 agtatgagagaaaaagttgttcaaaagttgtcacaaaatggttgtgcaaatatcatttctctat 13437195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 35857557 - 35857494
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| |||| |||||||||||| ||| |||||||| ||||||||||| |||||    
T  35857557 agtatgagagataaagttgtacaaaaattatcataaattaattgtacaaatatcatttttctat 35857494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 43079643 - 43079706
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| |||| |||||||||||||||| |  ||||| |||||||||||||||||    
T  43079643 agtatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctctat 43079706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 11604696 - 11604750
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||| ||||||||||||||||||||| |||||  ||||| |||||||||||    
T  11604696 atgagagataaaattgttcaaaaattatcataaaatttttgtacaaatatcattt 11604750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 12141956 - 12141898
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||||||| |||||||||| ||||||||||||  ||||| |||||| ||||||||    
T  12141956 atgagagaaaaagttgttcaaaagttatcacaaaatggttgtacaaatatgatttctct 12141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 47530305 - 47530363
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    |||||||| |||||||||||||| || ||| |||||  |||||||||||||||||||||    
T  47530305 atgagagagaaaattgttcaaaagttgtcataaaatggttgtataaatatcatttctct 47530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 49167888 - 49167926
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49167888 aaaaattatcacaaaataattgtacaaatatcatttctc 49167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 40760795 - 40760836
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  40760795 ttgttcaaaagttatcacaaaatagttgtataaatatcattt 40760836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 41798282 - 41798221
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||||||| ||||||||  |||||||||   ||||| ||||||||||||||||||||    
T  41798282 taagtatgagagagaaaattgtctaaaaattatttaaaaattattgtataaatatcatttct 41798221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 22692146 - 22692082
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||| ||||||||| |||| || ||| |||||  ||||| ||||||||||||||||    
T  22692146 taagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcatttctcta 22692082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 24249773 - 24249821
Alignment:
Q  43 aattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| ||||    
T  24249773 aattgttcaaaaattattataaaatgattgtataaatatcatttatcta 24249821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 41227106 - 41227066
Alignment:
Q  50 caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  41227106 caaaagttgtcacaaaataattgtataaatatcatttctct 41227066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 44175605 - 44175545
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| |||||||||||| |||||| |||||| |||||||    
T  44175605 agtatgagagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctc 44175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 49014412 - 49014452
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataatt 71  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  49014412 tatgagagagaaaattgtacaaaaattatcacaaaataatt 49014452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 27688964 - 27689023
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||| ||||| ||||||||| | || || || |||||||||||||||||||||||||||    
T  27688964 agtataagagataaaattgtttacaagttgtcgcaaaataattgtataaatatcatttct 27689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 32919013 - 32919052
Alignment:
Q  51 aaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  32919013 aaaaattgtcacaaaatgattgtataaatatcatttctct 32919052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 2849551 - 2849593
Alignment:
Q  48 ttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||| |||||| |||||||||||| |||||||||||||||    
T  2849551 ttcaaaagttatcaaaaaataattgtacaaatatcatttctct 2849593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 7458221 - 7458259
Alignment:
Q  48 ttcaaaaattatcacaaaataattgtataaatatcattt 86  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  7458221 ttcaaaaattgtcacaaaataattgtacaaatatcattt 7458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 24532953 - 24533011
Alignment:
Q  29 agtatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcattt 86  Q
    ||||||||||||||||||||  |||||||||||| |||||| ||||  |||||||||||    
T  24532953 agtatgagagaaaaaattgtcacaaaaattatcagaaaatagttgttcaaatatcattt 24533011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 34304689 - 34304751
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||||||||  ||||||| ||| |||||| ||||| ||||||||||| ||||    
T  34304689 agtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcatttttcta 34304751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 38990161 - 38990099
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||| ||||||| |||| |||||||||| | ||||||||| || | ||||||||||||||    
T  38990161 agtatgaaagaaaaagttgtccaaaaattatgaaaaaataattatacatatatcatttctcta 38990099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 116691 - 116630
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| |||| | ||| ||  ||||||||| |||||||||||||||||||||    
T  116691 agtatgagagagaaagttgtaccaaagttggcacaaaatagttgtataaatatcatttctct 116630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 6655626 - 6655687
Alignment:
Q  29 agtatgagagaaaaaattgttc-aaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||| |  || ||||||||||||||||| ||| || ||||||||||||||    
T  6655626 agtatgagagaaaaaaattatctaaaaattatcacaaaatgattttacaaatatcatttctc 6655687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 18157196 - 18157257
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||  ||||||||||||||| |  ||||| ||||||||| |||||    
T  18157196 agtatgagagagaaaattgtctaaaaattatcacaaagtggttgtacaaatatcatgtctct 18157257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 32933607 - 32933547
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||||||||  |||| || ||||||| |||||||| |||||||||||||||    
T  32933607 agtatgagagagaaaattgtcaaaaatttgtcacaaa-taattgtacaaatatcatttctct 32933547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 35212968 - 35213025
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttct 88  Q
    ||||||||| ||| |||| |||||||| |  ||||||||||||| |||||||||||||    
T  35212968 tatgagagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttct 35213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 38023435 - 38023496
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  ||||| |||||||||||||||    
T  38023435 agtatgagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctct 38023496  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 7807115 - 7807055
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||||||| ||||  |||| ||||||||||||   |||| ||||||||||||||    
T  7807115 agtatgagagaaaaagttgtaaaaaatttatcacaaaatgggtgtacaaatatcatttctc 7807055  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 26153705 - 26153646
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| |||||||| ||||| || ||| |||||| ||||| ||||||||||||||    
T  26153705 agtatgagagagaaaattgt-caaaagttgtcataaaatagttgtacaaatatcatttctc 26153646  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 28081793 - 28081853
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| ||||  ||||||||| |||||||  ||||| ||||||||||||||    
T  28081793 agtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 29355415 - 29355359
Alignment:
Q  36 gagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    |||| ||||||||| | ||||| |||||||||| ||||| | |||||||||||||||    
T  29355415 gagagaaaattgttaagaaattgtcacaaaatagttgtacagatatcatttctctat 29355359  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 29763890 - 29763830
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||| | ||| |||| ||||| ||||||||||||  ||||| ||||||||||||||    
T  29763890 agtatgagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 32044840 - 32044780
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||| ||||||||  ||||| ||||||| | |||||| ||||||| ||||||||||||||    
T  32044840 agtataagagaaaattttgttaaaaaattgttacaaaagaattgtacaaatatcatttctc 32044780  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 33050243 - 33050183
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| || |||||||||  ||||| ||||||||||||||    
T  33050243 agtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 40693537 - 40693601
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||||| ||| ||||  |||| || ||| |||||| ||||| ||||||||||||||||    
T  40693537 taagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctcta 40693601  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 42431771 - 42431723
Alignment:
Q  41 aaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||| ||||| |||||||||| ||  |||||||||||||||||||    
T  42431771 aaaattgtacaaaagttatcacaaattaggtgtataaatatcatttctc 42431723  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 47012582 - 47012642
Alignment:
Q  31 tatgagagaaaaaattgtt-caaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||||||| ||||||||  |||||||||| | ||||| |||||| |||||||||||||||    
T  47012582 tatgagagataaaattgtcacaaaaattattagaaaatgattgtacaaatatcatttctct 47012642  T

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Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 3935 - 3997
Alignment:
Q  31 tatgagagaaaaaattgt-tcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||| |||||    
T  3935 tatgagagagaaaattatctcaaaaattatcacaaaatgattgtataaatatcatttttctat 3997  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 38983 - 39054
Alignment:
Q  18 aacaacatttaagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||| ||| ||||||||||||| |||||||||||||| || ||||||||||| | || || |||||||||||    
T  38983 aacatcatgtaagtatgagagagaaaattgttcaaaagttgtcacaaaataaatataaaactatcatttctc 39054  T

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Target: scaffold0522 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 2515 - 2575
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| |||||||||||||| ||||  |||| ||||||||||||||    
T  2515 agtatgagagagaaagttgtccaaaaattatcacataatagatgtacaaatatcatttctc 2575  T

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Target: scaffold0662 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 1135 - 1076
Alignment:
Q  32 atgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    |||||||| ||| ||||| |||| || |||||||||| ||||| ||||||||||||||||    
T  1135 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttctcta 1076  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 35980 - 36027
Alignment:
Q  45 ttgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  35980 ttgttcaaaaattgtcacgaaatggttgtataaatatcatttctctat 36027  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 249153 - 249216
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctctat 92  Q
    ||||||||||| ||| |||| ||||| |||||||||| | |||||  |||||||||||||||||    
T  249153 agtatgagagagaaagttgtacaaaagttatcacaaattgattgtgcaaatatcatttctctat 249216  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 9859 - 9921
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||||| ||||||||  ||||||| | | ||||| |||||| ||||||||||||||||    
T  9859 agtatgagagagaaaattgtcaaaaaattgtgaaaaaatgattgtacaaatatcatttctcta 9921  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 395923 - 395861
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||| |||  |||||||  |||||||||||||||| | ||||| ||||||||||||||    
T  395923 taagtatgaaagatgaaattgtcaaaaaattatcacaaaagagttgtagaaatatcatttctc 395861  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 17339 - 17392
Alignment:
Q  27 taagtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaata 80  Q
    |||||||||||||||||||| || |||| |||| |||||||| ||||| |||||    
T  17339 taagtatgagagaaaaaattatttaaaagttattacaaaatagttgtacaaata 17392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 36062 - 36001
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctct 90  Q
    ||||| ||||| ||| ||||  ||||||||||||||| || ||||| |||||||||||||||    
T  36062 agtataagagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctct 36001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 3003 - 2943
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    |||||||||||||||||||| |||||  ||| | |||||  |||||||||||| |||||||    
T  3003 agtatgagagaaaaaattgtacaaaatatataaaaaaatggttgtataaatataatttctc 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 72424 - 72364
Alignment:
Q  31 tatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctcta 91  Q
    ||||||||| |||||||||||||| || |  ||||||  ||||| ||||||||||||||||    
T  72424 tatgagagagaaaattgttcaaaagttgttgcaaaatggttgtacaaatatcatttctcta 72364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 18655 - 18595
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| |||||||||| |  ||||| ||||||||||||||    
T  18655 agtatgagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttctc 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 147267 - 147327
Alignment:
Q  29 agtatgagagaaaaaattgttcaaaaattatcacaaaataattgtataaatatcatttctc 89  Q
    ||||||||||| ||| |||| ||||| || ||||||| |||||||| | ||||||||||||    
T  147267 agtatgagagagaaagttgtacaaaagttgtcacaaattaattgtacagatatcatttctc 147327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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