View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3537_high_46 (Length: 250)

Name: NF3537_high_46
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3537_high_46
NF3537_high_46
[»] chr8 (58 HSPs)
chr8 (1-244)||(45464640-45464883)
chr8 (1-244)||(45558445-45558691)
chr8 (1-240)||(18041041-18041284)
chr8 (1-243)||(33172718-33172964)
chr8 (38-239)||(17502650-17502854)
chr8 (1-243)||(4234573-4234819)
chr8 (1-243)||(24552078-24552325)
chr8 (1-195)||(31590553-31590751)
chr8 (9-243)||(23218371-23218608)
chr8 (1-223)||(22496721-22496942)
chr8 (8-203)||(27232610-27232806)
chr8 (9-203)||(19330847-19331042)
chr8 (9-243)||(22723611-22723850)
chr8 (9-203)||(37651947-37652141)
chr8 (38-243)||(16002490-16002699)
chr8 (9-191)||(22745279-22745462)
chr8 (35-203)||(18261018-18261188)
chr8 (9-177)||(33528985-33529161)
chr8 (9-132)||(22888368-22888493)
chr8 (9-119)||(23350793-23350904)
chr8 (8-75)||(29307108-29307175)
chr8 (9-119)||(33610544-33610655)
chr8 (7-132)||(24240224-24240351)
chr8 (64-244)||(38635224-38635404)
chr8 (35-223)||(11600708-11600901)
chr8 (10-119)||(23150423-23150532)
chr8 (9-110)||(23225660-23225761)
chr8 (9-119)||(23158801-23158911)
chr8 (12-75)||(23151342-23151404)
chr8 (9-75)||(23837890-23837955)
chr8 (9-141)||(5855207-5855339)
chr8 (10-86)||(23242548-23242624)
chr8 (9-76)||(21493976-21494042)
chr8 (35-73)||(20175325-20175363)
chr8 (35-73)||(20220052-20220090)
chr8 (9-76)||(18613056-18613122)
chr8 (89-182)||(15933852-15933946)
chr8 (9-75)||(17285896-17285961)
chr8 (30-76)||(22906783-22906829)
chr8 (30-76)||(30121366-30121412)
chr8 (9-75)||(38534339-38534404)
chr8 (29-76)||(15318712-15318759)
chr8 (29-76)||(15499081-15499128)
chr8 (29-76)||(22088347-22088394)
chr8 (29-76)||(24105766-24105813)
chr8 (30-76)||(3430817-3430863)
chr8 (30-76)||(6773824-6773870)
chr8 (9-75)||(21191099-21191163)
chr8 (30-76)||(24549624-24549670)
chr8 (35-76)||(23511877-23511918)
chr8 (35-96)||(24908420-24908481)
chr8 (35-96)||(24910641-24910702)
chr8 (29-65)||(13661818-13661854)
chr8 (29-65)||(13720481-13720517)
chr8 (29-65)||(16038428-16038464)
chr8 (30-74)||(16878292-16878336)
chr8 (29-65)||(17346199-17346235)
chr8 (29-65)||(17353194-17353230)
[»] chr5 (43 HSPs)
chr5 (1-242)||(21110244-21110486)
chr5 (1-243)||(26559335-26559570)
chr5 (1-244)||(5621299-5621550)
chr5 (1-239)||(19874253-19874497)
chr5 (1-243)||(16834805-16835053)
chr5 (35-240)||(23417737-23417946)
chr5 (9-203)||(29918601-29918797)
chr5 (9-203)||(6457136-6457332)
chr5 (9-188)||(22886167-22886347)
chr5 (9-226)||(23234029-23234249)
chr5 (8-185)||(37983916-37984101)
chr5 (1-106)||(11965964-11966071)
chr5 (9-134)||(21215957-21216084)
chr5 (9-139)||(21222129-21222259)
chr5 (9-119)||(5450332-5450442)
chr5 (35-109)||(32358765-32358839)
chr5 (9-73)||(32965232-32965296)
chr5 (9-185)||(24224866-24225042)
chr5 (15-76)||(7529574-7529634)
chr5 (10-132)||(11763017-11763142)
chr5 (8-75)||(3674552-3674619)
chr5 (20-58)||(23494597-23494635)
chr5 (5-50)||(3420514-3420559)
chr5 (160-195)||(11965913-11965948)
chr5 (9-76)||(17910165-17910231)
chr5 (30-76)||(13019-13065)
chr5 (88-185)||(5450438-5450536)
chr5 (29-76)||(16106316-16106363)
chr5 (29-76)||(17471144-17471191)
chr5 (30-76)||(4199546-4199592)
chr5 (30-76)||(11343347-11343393)
chr5 (30-76)||(18777549-18777595)
chr5 (30-76)||(19500525-19500571)
chr5 (30-76)||(22882640-22882686)
chr5 (157-203)||(24084599-24084645)
chr5 (19-73)||(28902883-28902936)
chr5 (19-73)||(28939278-28939331)
chr5 (30-76)||(43442959-43443005)
chr5 (35-76)||(9729920-9729961)
chr5 (15-75)||(7729110-7729169)
chr5 (29-65)||(23515225-23515261)
chr5 (30-62)||(24616952-24616984)
chr5 (30-62)||(24746211-24746243)
[»] scaffold0165 (2 HSPs)
scaffold0165 (2-244)||(30457-30701)
scaffold0165 (17-244)||(22490-22719)
[»] scaffold0022 (2 HSPs)
scaffold0022 (9-241)||(132308-132540)
scaffold0022 (35-223)||(67508-67691)
[»] chr3 (59 HSPs)
chr3 (9-244)||(11638790-11639028)
chr3 (1-244)||(21166586-21166837)
chr3 (1-223)||(43427021-43427247)
chr3 (10-243)||(31411157-31411393)
chr3 (4-236)||(41662065-41662299)
chr3 (35-223)||(38375240-38375431)
chr3 (23-223)||(10913397-10913601)
chr3 (9-203)||(50313748-50313944)
chr3 (29-196)||(4145603-4145771)
chr3 (36-203)||(6224632-6224800)
chr3 (9-190)||(18970469-18970649)
chr3 (17-203)||(33368458-33368645)
chr3 (11-203)||(8605355-8605548)
chr3 (35-223)||(40038474-40038665)
chr3 (35-243)||(25103534-25103746)
chr3 (46-203)||(17586486-17586644)
chr3 (35-223)||(37914837-37915028)
chr3 (9-130)||(12530996-12531119)
chr3 (115-236)||(17758233-17758354)
chr3 (115-236)||(19059553-19059674)
chr3 (9-181)||(34560411-34560584)
chr3 (9-109)||(13300964-13301063)
chr3 (9-109)||(13311620-13311719)
chr3 (29-149)||(4161768-4161889)
chr3 (9-75)||(19306470-19306538)
chr3 (9-75)||(3575954-3576019)
chr3 (9-78)||(9590253-9590321)
chr3 (9-76)||(14285635-14285701)
chr3 (10-60)||(38810506-38810556)
chr3 (10-75)||(11881712-11881776)
chr3 (15-75)||(12032202-12032261)
chr3 (9-73)||(17205365-17205428)
chr3 (15-76)||(22275850-22275910)
chr3 (9-73)||(11060501-11060564)
chr3 (9-65)||(11476718-11476773)
chr3 (15-62)||(38168604-38168650)
chr3 (10-68)||(14058737-14058794)
chr3 (35-76)||(16933515-16933556)
chr3 (8-76)||(9302663-9302730)
chr3 (111-203)||(14814387-14814479)
chr3 (29-65)||(14842126-14842162)
chr3 (29-76)||(18911645-18911692)
chr3 (29-76)||(23493031-23493078)
chr3 (29-76)||(49233092-49233139)
chr3 (30-76)||(8268291-8268337)
chr3 (30-76)||(8275391-8275437)
chr3 (9-68)||(11403272-11403333)
chr3 (30-76)||(12257368-12257414)
chr3 (30-76)||(13954458-13954504)
chr3 (9-75)||(15879059-15879124)
chr3 (30-76)||(17062206-17062252)
chr3 (30-76)||(27840871-27840917)
chr3 (30-76)||(45861454-45861500)
chr3 (35-76)||(12901658-12901699)
chr3 (35-76)||(15467916-15467957)
chr3 (15-60)||(39657228-39657272)
chr3 (9-72)||(12559733-12559796)
chr3 (29-65)||(44229651-44229687)
chr3 (9-73)||(48422241-48422304)
[»] chr1 (37 HSPs)
chr1 (9-243)||(33397838-33398076)
chr1 (1-243)||(40435776-40436026)
chr1 (1-244)||(5470498-5470744)
chr1 (9-236)||(5767687-5767916)
chr1 (9-203)||(21195536-21195731)
chr1 (35-222)||(75962-76152)
chr1 (1-195)||(18851901-18852100)
chr1 (37-223)||(25094369-25094559)
chr1 (35-203)||(49996826-49996996)
chr1 (13-203)||(8537443-8537635)
chr1 (13-203)||(8602682-8602874)
chr1 (9-188)||(52401178-52401357)
chr1 (9-119)||(22142856-22142965)
chr1 (9-131)||(20838968-20839092)
chr1 (8-141)||(17609524-17609658)
chr1 (10-73)||(19603799-19603862)
chr1 (9-75)||(16646601-16646667)
chr1 (9-81)||(7322928-7323001)
chr1 (20-185)||(17023557-17023721)
chr1 (157-243)||(20194517-20194605)
chr1 (15-75)||(41219361-41219420)
chr1 (9-75)||(51627186-51627251)
chr1 (9-75)||(20177840-20177905)
chr1 (29-75)||(27675460-27675506)
chr1 (9-75)||(37233348-37233413)
chr1 (29-76)||(17005294-17005341)
chr1 (29-76)||(18059315-18059362)
chr1 (29-76)||(20254973-20255020)
chr1 (29-76)||(22228461-22228508)
chr1 (30-76)||(7640494-7640540)
chr1 (19-73)||(16657330-16657383)
chr1 (30-76)||(22036087-22036133)
chr1 (30-76)||(46524029-46524075)
chr1 (35-76)||(19962060-19962101)
chr1 (9-62)||(20954933-20954985)
chr1 (29-66)||(21654634-21654671)
chr1 (30-74)||(13583386-13583430)
[»] chr4 (49 HSPs)
chr4 (1-223)||(54398896-54399122)
chr4 (9-243)||(18235716-18235954)
chr4 (9-243)||(10375023-10375260)
chr4 (4-223)||(10236780-10237001)
chr4 (9-223)||(54362807-54363025)
chr4 (8-203)||(41255888-41256084)
chr4 (9-203)||(15012805-15012999)
chr4 (9-244)||(28428242-28428480)
chr4 (1-227)||(13589579-13589810)
chr4 (35-223)||(12133153-12133344)
chr4 (9-191)||(38765252-38765435)
chr4 (1-243)||(47467858-47468104)
chr4 (1-243)||(50219453-50219698)
chr4 (9-243)||(19559853-19560090)
chr4 (1-243)||(41916253-41916498)
chr4 (1-203)||(40904442-40904647)
chr4 (9-185)||(7964231-7964408)
chr4 (114-244)||(13442301-13442432)
chr4 (1-84)||(13441850-13441935)
chr4 (14-80)||(7185385-7185451)
chr4 (9-132)||(49072294-49072419)
chr4 (35-183)||(24238180-24238330)
chr4 (9-73)||(32460252-32460314)
chr4 (10-75)||(40885057-40885122)
chr4 (15-73)||(14499738-14499795)
chr4 (29-76)||(14996786-14996833)
chr4 (9-76)||(19021135-19021201)
chr4 (9-75)||(12244376-12244440)
chr4 (9-75)||(18493630-18493695)
chr4 (9-75)||(37956532-37956597)
chr4 (9-73)||(15213106-15213171)
chr4 (20-80)||(19821279-19821339)
chr4 (29-76)||(7131622-7131669)
chr4 (29-76)||(37477809-37477856)
chr4 (29-76)||(41063547-41063594)
chr4 (20-75)||(47534582-47534636)
chr4 (30-76)||(8378817-8378863)
chr4 (8-64)||(9652588-9652646)
chr4 (30-76)||(10644863-10644909)
chr4 (30-76)||(15286804-15286850)
chr4 (30-76)||(15293913-15293959)
chr4 (30-76)||(18169621-18169667)
chr4 (35-76)||(18248850-18248891)
chr4 (35-76)||(22351628-22351669)
chr4 (36-76)||(16523489-16523529)
chr4 (36-76)||(19696929-19696969)
chr4 (36-76)||(19707514-19707554)
chr4 (30-74)||(20001366-20001410)
chr4 (30-62)||(54047416-54047448)
[»] chr7 (54 HSPs)
chr7 (9-244)||(13448343-13448582)
chr7 (1-243)||(33560140-33560383)
chr7 (1-243)||(39285684-39285932)
chr7 (1-223)||(45150098-45150325)
chr7 (1-227)||(9723312-9723543)
chr7 (3-243)||(4439276-4439519)
chr7 (1-241)||(4446707-4446950)
chr7 (13-203)||(4485250-4485440)
chr7 (8-174)||(10332018-10332185)
chr7 (35-203)||(31501704-31501874)
chr7 (89-244)||(28390792-28390947)
chr7 (1-223)||(18079005-18079230)
chr7 (10-203)||(14942535-14942730)
chr7 (10-203)||(15370128-15370323)
chr7 (9-244)||(28722600-28722837)
chr7 (9-185)||(34240718-34240902)
chr7 (1-236)||(9250939-9251175)
chr7 (1-236)||(9319074-9319310)
chr7 (163-243)||(8267401-8267482)
chr7 (9-119)||(14268391-14268502)
chr7 (22-223)||(20583087-20583289)
chr7 (144-223)||(46474515-46474594)
chr7 (11-82)||(28392357-28392429)
chr7 (9-141)||(48357239-48357372)
chr7 (9-205)||(16914446-16914644)
chr7 (35-110)||(21675295-21675370)
chr7 (46-183)||(8562890-8563030)
chr7 (17-220)||(13352468-13352675)
chr7 (9-101)||(46474606-46474699)
chr7 (11-185)||(9611860-9612041)
chr7 (11-185)||(9839431-9839612)
chr7 (9-81)||(14935836-14935909)
chr7 (9-81)||(15363429-15363502)
chr7 (9-75)||(16920226-16920291)
chr7 (9-76)||(47480563-47480629)
chr7 (9-75)||(13378193-13378258)
chr7 (35-73)||(44304564-44304602)
chr7 (35-75)||(17223508-17223548)
chr7 (42-94)||(21537339-21537391)
chr7 (15-62)||(3050270-3050316)
chr7 (42-81)||(17923143-17923182)
chr7 (29-76)||(15950348-15950395)
chr7 (29-76)||(18253403-18253450)
chr7 (30-76)||(10264298-10264344)
chr7 (29-75)||(13390046-13390092)
chr7 (30-76)||(15516415-15516461)
chr7 (30-76)||(15928221-15928267)
chr7 (30-76)||(16419149-16419195)
chr7 (35-76)||(10990056-10990097)
chr7 (9-61)||(13275455-13275508)
chr7 (29-65)||(14250455-14250491)
chr7 (36-76)||(26009706-26009746)
chr7 (167-203)||(38424749-38424785)
chr7 (30-74)||(48756758-48756802)
[»] scaffold0004 (2 HSPs)
scaffold0004 (9-243)||(86849-87085)
scaffold0004 (1-243)||(27989-28235)
[»] chr6 (52 HSPs)
chr6 (9-223)||(116570-116787)
chr6 (9-243)||(15889231-15889468)
chr6 (1-233)||(19854616-19854851)
chr6 (10-243)||(22585080-22585308)
chr6 (10-243)||(22589911-22590139)
chr6 (1-236)||(32352508-32352736)
chr6 (1-243)||(34967364-34967610)
chr6 (1-243)||(22461604-22461852)
chr6 (9-243)||(15004433-15004672)
chr6 (19-243)||(23223244-23223473)
chr6 (9-189)||(29157962-29158146)
chr6 (13-204)||(31467099-31467290)
chr6 (1-150)||(18506869-18507022)
chr6 (10-150)||(22582290-22582433)
chr6 (29-190)||(29605935-29606097)
chr6 (9-243)||(21931696-21931939)
chr6 (15-188)||(22848617-22848791)
chr6 (9-78)||(33537882-33537951)
chr6 (35-149)||(17013257-17013373)
chr6 (9-119)||(18629102-18629211)
chr6 (9-110)||(17082694-17082794)
chr6 (8-75)||(17547171-17547239)
chr6 (16-110)||(18381312-18381405)
chr6 (9-65)||(25654811-25654867)
chr6 (88-185)||(18629207-18629305)
chr6 (9-65)||(19171238-19171295)
chr6 (36-141)||(14152908-14153014)
chr6 (9-75)||(16887312-16887377)
chr6 (10-61)||(15079263-15079313)
chr6 (88-185)||(25654675-25654773)
chr6 (37-141)||(14128761-14128866)
chr6 (9-64)||(26519122-26519179)
chr6 (9-60)||(25366738-25366789)
chr6 (9-76)||(16299525-16299591)
chr6 (29-76)||(16555688-16555735)
chr6 (29-76)||(16632244-16632291)
chr6 (7-61)||(17854894-17854949)
chr6 (29-76)||(18838788-18838835)
chr6 (30-76)||(16232543-16232589)
chr6 (30-76)||(19610668-19610714)
chr6 (9-75)||(21623861-21623926)
chr6 (35-76)||(4991729-4991770)
chr6 (35-76)||(9276584-9276625)
chr6 (35-76)||(14625693-14625734)
chr6 (35-76)||(16814566-16814607)
chr6 (35-76)||(19299891-19299932)
chr6 (35-76)||(19629963-19630004)
chr6 (171-243)||(23222399-23222472)
chr6 (10-75)||(25920274-25920338)
chr6 (36-76)||(10489355-10489395)
chr6 (20-64)||(23224213-23224257)
chr6 (30-74)||(23978412-23978456)
[»] chr2 (45 HSPs)
chr2 (9-239)||(6095177-6095411)
chr2 (8-243)||(9637923-9638161)
chr2 (9-243)||(24278252-24278490)
chr2 (37-223)||(25595532-25595721)
chr2 (1-243)||(11010191-11010447)
chr2 (35-220)||(18537271-18537457)
chr2 (9-149)||(16292341-16292484)
chr2 (9-119)||(24885283-24885394)
chr2 (172-244)||(16292484-16292556)
chr2 (9-76)||(22284638-22284704)
chr2 (9-223)||(29114882-29115101)
chr2 (9-119)||(2155321-2155431)
chr2 (10-75)||(2739-2803)
chr2 (9-80)||(43646542-43646618)
chr2 (88-185)||(24885189-24885287)
chr2 (15-76)||(28030763-28030823)
chr2 (9-76)||(16936230-16936296)
chr2 (9-76)||(17006890-17006956)
chr2 (15-73)||(24086953-24087010)
chr2 (9-75)||(25306095-25306160)
chr2 (20-65)||(22256541-22256585)
chr2 (29-76)||(11230891-11230938)
chr2 (29-76)||(17205004-17205051)
chr2 (29-80)||(19660563-19660614)
chr2 (20-75)||(19668641-19668695)
chr2 (29-76)||(24685335-24685382)
chr2 (29-76)||(33128722-33128769)
chr2 (30-76)||(5888198-5888244)
chr2 (9-81)||(16446407-16446480)
chr2 (30-76)||(19688969-19689015)
chr2 (9-75)||(23821299-23821364)
chr2 (9-75)||(23830378-23830443)
chr2 (9-75)||(24294015-24294080)
chr2 (38-72)||(24841577-24841611)
chr2 (30-76)||(25213716-25213762)
chr2 (35-76)||(23777609-23777650)
chr2 (30-75)||(24826260-24826305)
chr2 (30-74)||(3798172-3798216)
chr2 (20-76)||(7507389-7507444)
chr2 (30-74)||(8944489-8944533)
chr2 (30-74)||(12635437-12635481)
chr2 (30-74)||(12641213-12641257)
chr2 (30-74)||(12729035-12729079)
chr2 (30-74)||(34825118-34825162)
chr2 (29-65)||(42177525-42177561)
[»] scaffold0148 (1 HSPs)
scaffold0148 (9-244)||(38049-38288)
[»] scaffold0063 (1 HSPs)
scaffold0063 (9-243)||(43639-43876)
[»] scaffold0193 (2 HSPs)
scaffold0193 (9-203)||(5134-5329)
scaffold0193 (29-76)||(32197-32244)
[»] scaffold0406 (1 HSPs)
scaffold0406 (9-245)||(14526-14766)
[»] scaffold0601 (1 HSPs)
scaffold0601 (35-243)||(422-634)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-203)||(5953-6156)
[»] scaffold0153 (1 HSPs)
scaffold0153 (1-227)||(9001-9234)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-203)||(26503-26706)
[»] scaffold0025 (2 HSPs)
scaffold0025 (11-191)||(86055-86235)
scaffold0025 (9-185)||(53886-54062)
[»] scaffold0598 (1 HSPs)
scaffold0598 (9-203)||(3774-3966)
[»] scaffold0670 (1 HSPs)
scaffold0670 (9-243)||(7191-7429)
[»] scaffold0049 (1 HSPs)
scaffold0049 (8-206)||(32939-33141)
[»] scaffold0452 (1 HSPs)
scaffold0452 (9-243)||(2301-2540)
[»] scaffold0047 (1 HSPs)
scaffold0047 (38-223)||(19472-19660)
[»] scaffold0020 (1 HSPs)
scaffold0020 (9-191)||(108554-108738)
[»] scaffold0385 (1 HSPs)
scaffold0385 (9-239)||(12144-12379)
[»] scaffold0080 (3 HSPs)
scaffold0080 (12-203)||(23207-23398)
scaffold0080 (9-65)||(43362-43418)
scaffold0080 (125-185)||(43436-43496)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-131)||(13370-13489)
[»] scaffold0151 (2 HSPs)
scaffold0151 (14-119)||(21912-22018)
scaffold0151 (115-185)||(22041-22111)
[»] scaffold0357 (1 HSPs)
scaffold0357 (35-185)||(6967-7117)
[»] scaffold0057 (1 HSPs)
scaffold0057 (9-132)||(6452-6577)
[»] scaffold0031 (1 HSPs)
scaffold0031 (9-185)||(96718-96894)
[»] scaffold0387 (3 HSPs)
scaffold0387 (9-110)||(500-602)
scaffold0387 (135-203)||(610-678)
scaffold0387 (15-76)||(6725-6785)
[»] scaffold0133 (1 HSPs)
scaffold0133 (35-149)||(25859-25975)
[»] scaffold0700 (1 HSPs)
scaffold0700 (9-185)||(3077-3254)
[»] scaffold0065 (1 HSPs)
scaffold0065 (48-138)||(67498-67589)
[»] scaffold0010 (2 HSPs)
scaffold0010 (9-75)||(31711-31776)
scaffold0010 (88-185)||(31572-31670)
[»] scaffold0118 (1 HSPs)
scaffold0118 (9-76)||(33972-34038)
[»] scaffold0032 (4 HSPs)
scaffold0032 (9-75)||(93343-93409)
scaffold0032 (9-110)||(104114-104213)
scaffold0032 (29-76)||(107714-107761)
scaffold0032 (29-65)||(12909-12945)
[»] scaffold0138 (1 HSPs)
scaffold0138 (10-75)||(21922-21986)
[»] scaffold0006 (1 HSPs)
scaffold0006 (9-204)||(196771-196966)
[»] scaffold1295 (1 HSPs)
scaffold1295 (9-73)||(795-859)
[»] scaffold0682 (1 HSPs)
scaffold0682 (9-76)||(8081-8147)
[»] scaffold0207 (1 HSPs)
scaffold0207 (9-76)||(11349-11415)
[»] scaffold0066 (2 HSPs)
scaffold0066 (15-78)||(45683-45745)
scaffold0066 (15-78)||(55069-55131)
[»] scaffold0009 (2 HSPs)
scaffold0009 (9-110)||(70114-70215)
scaffold0009 (88-185)||(70010-70108)
[»] scaffold0013 (2 HSPs)
scaffold0013 (37-131)||(6625-6717)
scaffold0013 (9-75)||(36141-36206)
[»] scaffold1932 (1 HSPs)
scaffold1932 (16-119)||(899-1003)
[»] scaffold0521 (1 HSPs)
scaffold0521 (20-75)||(11784-11838)
[»] scaffold0335 (1 HSPs)
scaffold0335 (9-76)||(5098-5164)
[»] scaffold0347 (1 HSPs)
scaffold0347 (8-64)||(4984-5042)
[»] scaffold0150 (1 HSPs)
scaffold0150 (29-75)||(29227-29273)
[»] scaffold0016 (1 HSPs)
scaffold0016 (9-75)||(116049-116114)
[»] scaffold0643 (1 HSPs)
scaffold0643 (10-75)||(174-238)
[»] scaffold0507 (1 HSPs)
scaffold0507 (9-73)||(1031-1095)
[»] scaffold0058 (1 HSPs)
scaffold0058 (15-75)||(69834-69894)
[»] scaffold0361 (1 HSPs)
scaffold0361 (9-76)||(3847-3913)
[»] scaffold0173 (1 HSPs)
scaffold0173 (9-76)||(5883-5949)
[»] scaffold0125 (1 HSPs)
scaffold0125 (9-76)||(43593-43659)
[»] scaffold1272 (1 HSPs)
scaffold1272 (9-75)||(971-1036)
[»] scaffold0483 (1 HSPs)
scaffold0483 (9-75)||(7354-7419)
[»] scaffold0331 (1 HSPs)
scaffold0331 (10-64)||(5331-5385)
[»] scaffold0012 (2 HSPs)
scaffold0012 (35-81)||(180435-180481)
scaffold0012 (157-223)||(180549-180616)
[»] scaffold0367 (1 HSPs)
scaffold0367 (35-76)||(16869-16910)
[»] scaffold0021 (3 HSPs)
scaffold0021 (9-62)||(12754-12806)
scaffold0021 (9-59)||(16604-16653)
scaffold0021 (9-59)||(26135-26184)
[»] scaffold0808 (1 HSPs)
scaffold0808 (9-61)||(1808-1860)
[»] scaffold0231 (2 HSPs)
scaffold0231 (88-183)||(12329-12428)
scaffold0231 (10-64)||(12243-12298)
[»] scaffold0029 (1 HSPs)
scaffold0029 (9-65)||(49375-49430)
[»] scaffold0028 (2 HSPs)
scaffold0028 (9-77)||(80225-80292)
scaffold0028 (29-76)||(131231-131278)
[»] scaffold0892 (1 HSPs)
scaffold0892 (29-76)||(4060-4107)
[»] scaffold0615 (1 HSPs)
scaffold0615 (29-76)||(5751-5798)
[»] scaffold0574 (1 HSPs)
scaffold0574 (29-76)||(9050-9097)
[»] scaffold0467 (1 HSPs)
scaffold0467 (29-76)||(8648-8695)
[»] scaffold0369 (1 HSPs)
scaffold0369 (29-76)||(4375-4422)
[»] scaffold0225 (1 HSPs)
scaffold0225 (29-76)||(22885-22932)
[»] scaffold0175 (1 HSPs)
scaffold0175 (29-76)||(519-566)
[»] scaffold0116 (1 HSPs)
scaffold0116 (16-68)||(34316-34370)
[»] scaffold0026 (1 HSPs)
scaffold0026 (29-76)||(108393-108440)
[»] scaffold0023 (3 HSPs)
scaffold0023 (9-76)||(60742-60808)
scaffold0023 (30-76)||(358-404)
scaffold0023 (36-76)||(153569-153609)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-76)||(164536-164583)
[»] scaffold0473 (1 HSPs)
scaffold0473 (30-76)||(9629-9675)
[»] scaffold0215 (2 HSPs)
scaffold0215 (30-76)||(8912-8958)
scaffold0215 (30-76)||(15810-15856)
[»] scaffold0213 (1 HSPs)
scaffold0213 (30-76)||(29842-29888)
[»] scaffold0183 (1 HSPs)
scaffold0183 (30-76)||(7248-7294)
[»] scaffold0162 (1 HSPs)
scaffold0162 (88-177)||(6621-6711)
[»] scaffold0123 (1 HSPs)
scaffold0123 (9-75)||(11564-11629)
[»] scaffold0077 (1 HSPs)
scaffold0077 (30-76)||(2645-2691)
[»] scaffold0076 (1 HSPs)
scaffold0076 (30-76)||(43641-43687)
[»] scaffold0003 (1 HSPs)
scaffold0003 (30-76)||(7861-7907)
[»] scaffold0327 (1 HSPs)
scaffold0327 (10-75)||(6358-6422)
[»] scaffold0303 (1 HSPs)
scaffold0303 (35-76)||(4003-4044)
[»] scaffold0155 (1 HSPs)
scaffold0155 (35-76)||(23313-23354)
[»] scaffold1500 (1 HSPs)
scaffold1500 (29-65)||(1070-1106)
[»] scaffold0850 (1 HSPs)
scaffold0850 (30-74)||(5124-5168)
[»] scaffold0480 (1 HSPs)
scaffold0480 (15-75)||(8410-8469)
[»] scaffold0257 (1 HSPs)
scaffold0257 (30-74)||(6005-6049)
[»] scaffold0218 (1 HSPs)
scaffold0218 (17-80)||(26939-27002)


Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 45464640 - 45464883
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    |||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45464640 aaattcacatgatgattatttttagtgttttagcaagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 45464739  T
Q  101 agtattttacgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttata 200  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  45464740 agtattttacgttaagtgagtaaaaacattttagaattgtggatgagtgagttgagcccactaaggcattagggttaagcccatttgagaagagcctata 45464839  T
Q  201 taagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45464840 taagttctagactttagagaaaataggacttcatttcatttcac 45464883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 45558445 - 45558691
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgt 99  Q
    ||||||||| ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  45558445 aaattcatggtgaggattatttttattgttttagtgaggaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatcgttgt 45558544  T
Q  100 tagtatttta-cgttaagtgagtaaaaacattttataa-ttgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctt 197  Q
    |||||||||| ||||||||||||| |||||||||| || |||||||||||||  || | |||||||| |||||| ||||||||||||||||| ||||| |    
T  45558545 tagtattttaccgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccactaatgcattatggttaagcccatttgagtagagcct 45558644  T
Q  198 atataagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  45558645 atataagttctaaactttagagaaaataggtcttcatttcatttcac 45558691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18041041 - 18041284
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| |||||||||| |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  18041041 aaattcatggtgaggattatctttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttg 18041140  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| ||||||| |||||||||||||||||||||||| |||| ||||||| |||| || | |||||||||||||||||||||||| ||||||| | ||||     
T  18041141 ttattattttaccgttaagtgagtaaaaacattttagaattagtgaatgggtgagttaagcccactaaggcattagggttaagctcatttgataggagcc 18041240  T
Q  197 tatataagttctagactttagagaaaataggacttcatttcatt 240  Q
    |||||||  ||| | ||||||||||||||||  |||||||||||    
T  18041241 tatataaactcttgtctttagagaaaataggttttcatttcatt 18041284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 33172964 - 33172718
Alignment:
Q  1 aaattcatg-tgaggattatttt-tagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgtt 97  Q
    ||||||||| ||||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||    
T  33172964 aaattcatggtgaggattattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtggtagttagttgtgagccggtaagtgatcgtt 33172865  T
Q  98 gttagtattttacgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    |||| ||||||||  | |||||||| |||||||||| |||| |||||||||||| || |  |||||||||||||| ||||||||||||||||||  |||     
T  33172864 gttattattttaccgttagtgagtagaaacattttagaattagtgaatgagtgagttaagtccactaaggcattaaggttaagcccatttgagagaagcc 33172765  T
Q  197 tatataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    |||||||  | | | ||||||||||||||||  ||||||||||||||    
T  33172764 tatataaacttttgtctttagagaaaataggttttcatttcatttca 33172718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 38 - 239
Target Start/End: Complemental strand, 17502854 - 17502650
Alignment:
Q  38 aaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataa 136  Q
    ||||||||||||||||||||||||||||| |||||||||||||   | |||||||||||||||| |||||||| | |||||||||| ||| |||||| |     
T  17502854 aaccattattttactaagttactagtgtgataattagttgtgaactggtgagtgatcgttgttattattttaccgctaagtgagtagaaatattttagag 17502755  T
Q  137 tt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggacttcat 234  Q
    || ||||||| |||| || | ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||    
T  17502754 ttagtgaatgggtgagttaagcccactaaggctttagggttaagcccatttgagaagagcctatataagttctagactttagagaaaaatagggtttcat 17502655  T
Q  235 ttcat 239  Q
    |||||    
T  17502654 ttcat 17502650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 4234819 - 4234573
Alignment:
Q  1 aaattcatgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgt 99  Q
    |||||||| ||||||||||||||||||||| | | ||||||| |||||||||||||||| |||||||||||||||||||||| || | ||||||||||||    
T  4234819 aaattcatatgaggattatttttagtgtttaaagtgagaaccgttattttactaagttattagtgtggtaattagttgtgagccggtaagtgatcgttgt 4234720  T
Q  100 tagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctt 197  Q
    |||||||||| ||||||||||||| ||| |||||| |||| |||||||| ||| || | |||||||| || |||||||||| | ||||||||| |||| |    
T  4234719 tagtattttaccgttaagtgagtagaaatattttagaattagtgaatgaatgagttaagcccactaaagctttagggttaaactcatttgagaggagcct 4234620  T
Q  198 atataagttctagactttagagaaaataggacttcatt-tcatttca 243  Q
    ||||||  ||  | ||||||||||||||||  |||||| ||||||||    
T  4234619 atataaactcatgtctttagagaaaataggttttcattctcatttca 4234573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 24552078 - 24552325
Alignment:
Q  1 aaattcatgt-gaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    |||||||||| || ||||||||||||||||| | |  |||||||||||||||||||||||||| |||||||||||||| |||| || | || ||||||||    
T  24552078 aaattcatgttgaagattatttttagtgtttcaagtaagaaccattattttactaagttactactgtggtaattagttatgagccggtaagagatcgttg 24552177  T
Q  99 ttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| |||||||| || ||||||||| |||||||||| |||| | |  ||||||  || | |||||||||||||||||||||||||||||||| || |||     
T  24552178 ttattattttactgtcaagtgagtagaaacattttagaattagagtttgagtgggttaagcccactaaggcattagggttaagcccatttgaaaaaagcc 24552277  T
Q  197 tatataagttctagactttaga-gaaaataggacttcatttcatttca 243  Q
    |||||||||||||||||||||| |||||||||  | ||||||||||||    
T  24552278 tatataagttctagactttagaggaaaataggtttacatttcatttca 24552325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 31590751 - 31590553
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  31590751 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttg 31590652  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataa-ttgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagc 195  Q
    |   ||||||| |||||||||| || |||||||||| || |||||||||||||  || | ||||||||||||||||||||| ||||||||||| |||||    
T  31590651 tatttattttaccgttaagtgaatagaaacattttagaatttgtgaatgagtgggttaagcccactaaggcattagggttaggcccatttgagtagagc 31590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 23218608 - 23218371
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||||||| |||||||| | | ||||||| || |||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||    
T  23218608 gtgaggattatttgtagtgtttcaagtgagaaccgttgttttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttattattt 23218509  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || ||||||||||||| |||||| ||| |||| |||| |||||||  | | |||||||| |||||| |||||||||||||||||| |||| ||||| |      
T  23218508 taccgttaagtgagtagaaacatcttagaattagtgattgagtgagctaagcccactaaagcattaaggttaagcccatttgagaggagcctatattaac 23218409  T
Q  206 tctagactttagagaaaataggacttcatttcatttca 243  Q
    ||| | |||||||||||||||   ||||||||||||||    
T  23218408 tcttgtctttagagaaaatagtttttcatttcatttca 23218371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 22496721 - 22496942
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| |||||||||||||||| |||| | | |||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||||||    
T  22496721 aaattcatggtgaggattatttttagagtttcaagtgagaaccattattttaataagttactagtgtggtaattagttgtgagccgagaagtgatcgttg 22496820  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctt 197  Q
    ||| ||| ||| ||||||||||||| |||||||||| ||||   | ||| | | || | |||||||||||||||||||||||||||||||||| || | |    
T  22496821 ttattatgttaccgttaagtgagtagaaacattttagaatt---agtga-taagttaagcccactaaggcattagggttaagcccatttgagaggaacct 22496916  T
Q  198 atataagttctagactttagagaaaa 223  Q
    ||||||||| ||| ||||||||||||    
T  22496917 atataagttttaggctttagagaaaa 22496942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 27232610 - 27232806
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||||||  | | |||||   |||||| |||||    
T  27232610 tgtgaggattatttttagtgtttcagtgagagccattattttactaagttactagtgtggtaaatagttgtgagctggtaagtgacaattgttactattt 27232709  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||| ||| |||||||||| |||||| | ||||||  || | ||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  27232710 taccgttaagtgtgtagaaacattttagaattgtaattgagtgggttaagcccactaaggcattagggttaggcccatttgagaatagcctatataa 27232806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 19330847 - 19331042
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||  ||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| |||||||||||||||    
T  19330847 gtgaggaacatttttagtgtgttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtatttt 19330946  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | ||||||||| ||| |||| ||||| |||| ||| || |||  || | ||||||||| |||||| ||| |||||||||||||| ||| |||||||    
T  19330947 accgttaagtgtgtagaaactttttagaattatgattgggtgggttaagcccactaagacattagagttgagcccatttgagaatagcctatataa 19331042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 22723850 - 22723611
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||| ||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||||| |||| || |  |||||||| |||| |||||    
T  22723850 gtgaggatcatttttagtgtttcaagtgagaaccgttattttactaagttactagtgtggtaattagttttgagccggtaggtgatcgtcgttattattt 22723751  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataag 204  Q
    || ||||||||| ||| |||||||||  |||| || ||||||||| |||| |||| ||||||||| ||||||||||||| ||||||  | | ||||||||    
T  22723750 taccgttaagtgggtagaaacatttttgaattagttaatgagtgagttgagcccattaaggcattaagggttaagcccaattgagataatcctatataag 22723651  T
Q  205 ttctagactttagag-aaaataggacttcatttcatttca 243  Q
    ||||||  ||||||| ||||||||  ||||||||||||||    
T  22723650 ttctagtatttagagaaaaataggttttcatttcatttca 22723611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 37651947 - 37652141
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccatta-ttttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| || ||| |||||||||  || | ||||| ||||||||||||||    
T  37651947 gtgaggattatttttagtattttagtgagaaccattatttttactaagttactagtatgttaaatagttgtgaaccggtaagtgaccgttgttagtattt 37652046  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||  ||| |||||||||| |||||||| || ||| | | |  ||||||||||||||||||| || ||||||||||| ||| |||||||    
T  37652047 taccgttaagt--gtagaaacattttagaattgtgattgggtggaataagtccactaaggcattagggttgagtccatttgagaatagcctatataa 37652141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 243
Target Start/End: Complemental strand, 16002699 - 16002490
Alignment:
Q  38 aaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataa 136  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||| | ||  |||||| ||| |||||||| |||||||||||| |||||||    ||    
T  16002699 aaccattattttactaagtttctagcgtggtaattagttgcgagtcggtaagctatcgttattattattttaccgttaagtgagtagaaacattcctgaa 16002600  T
Q  137 tt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggacttca 233  Q
    || || | ||||||| |||| |||| ||||||||| |||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||||   ||||    
T  16002599 ttagttattgagtgagttgagcccattaaggcattgagggttaaacccatttgagaggagcctatataagttctagtctttagagaaaaatagattttca 16002500  T
Q  234 tttcatttca 243  Q
    ||||||||||    
T  16002499 tttcatttca 16002490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 22745462 - 22745279
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||| ||||||  || ||||||||||||||| ||||||||||||||||||||| ||||||||||  | | ||||| ||||||||||||||    
T  22745462 gtgaggattatttt-agtgttcaagtgagaaccattatttttactaagttactagtgtggtaaatagttgtgagctggtaagtgaccgttgttagtattt 22745364  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaa 191  Q
    || | |||| || ||  |||||||||| ||||| || || |||  || | |||||||||||||||||||| ||||||||||||||    
T  22745363 taccattaaatgtgtggaaacattttagaattgagattgggtgggttaagcccactaaggcattagggttgagcccatttgagaa 22745279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 18261018 - 18261188
Alignment:
Q  35 gagaaccattat-tttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttt 132  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||| || | ||||| |||||||||| ||||| |||||| || ||| ||| |||||    
T  18261018 gagaaccattatgtttactaagtcactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtgttttaccgttaactgtgtagaaatatttt 18261117  T
Q  133 ataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | | |||||| || |||  || | ||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  18261118 agagttgtgattgggtgggttaagcccactaaggcattaggattaagcccatttgagaatagcctatataa 18261188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 33529161 - 33528985
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagt-------cgatgagtgatcgttgtta 101  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||| |||       || | |||||||||| |||    
T  33529161 gtgaggattatttttagtgttttagtgagaaccattattttgctaagttactggtgtagtaattagttgttagtattttaccgttaagtgatcgttatta 33529062  T
Q  102 gtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggtta 177  Q
    |||||||| ||||||| | ||| |||||||||| |||||||  ||||||  || |  ||||||||||||||||||||    
T  33529061 gtattttaccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaaatccactaaggcattagggtta 33528985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 22888493 - 22888368
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||  ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| ||| | |||    
T  22888493 gtgaggaacatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttattattgttt 22888394  T
Q  108 ta-cgttaagtgagtaaaaacatttt 132  Q
    || ||||||||||||| |||||||||    
T  22888393 taccgttaagtgagtacaaacatttt 22888368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 23350904 - 23350793
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||  || | |||||  ||||||||||||||    
T  23350904 gtgaggattatttttagtgttttagtgagaaccattattttactaagttactagtatagtaattagttgagaaccgttaagtgactgttgttagtatttt 23350805  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  23350804 accgttaagtga 23350793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 29307175 - 29307108
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29307175 tgtgaggattatttttagtgttttagtgagaaccattattttactaagttactagtgtggtaattagt 29307108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 33610544 - 33610655
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||  || | ||| | |||||||||||||||    
T  33610544 gtgagtattatttttagtgttttagtgagaaccattattttactatgttactagtgtagtaattagttgtgaaccgttaagtaaccgttgttagtatttt 33610643  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  33610644 accgttaagtga 33610655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 24240351 - 24240224
Alignment:
Q  7 atgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtat 105  Q
    |||||||| ||| ||||||||||| | | ||||||||||||||||||||||||||| || ||||||||| ||||||||| | ||||| |||| ||| |||    
T  24240351 atgtgagggttacttttagtgtttcaagtgagaaccattattttactaagttactattgcggtaattagatgtgagtcggtaagtgaccgttattattat 24240252  T
Q  106 tttac-gttaagtgagtaaaaacatttt 132  Q
    ||||| |||||||||||| |||||||||    
T  24240251 tttactgttaagtgagtagaaacatttt 24240224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 244
Target Start/End: Original strand, 38635224 - 38635404
Alignment:
Q  64 gtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccact 162  Q
    ||||||| ||||||||||  | | ||| | ||||||||||||||||| ||||||||  || |||||||||| |||||||| ||||||  || |  ||||     
T  38635224 gtggtaaatagttgtgagctggtaagtaaccgttgttagtattttactgttaagtg--tataaacattttagaattgtgattgagtgggttaagtccacc 38635321  T
Q  163 aaggcattagggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggacttcatttcatttcac 244  Q
    ||| |||||||||||||| |||||||| ||||| |||||||||| ||||||| |||| ||||||||  | |||||||||||||    
T  38635322 aagacattagggttaagctcatttgagtagagcctatataagttttagacttgagagaaaaataggtttacatttcatttcac 38635404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 11600901 - 11600708
Alignment:
Q  35 gagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttt 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||||| ||| ||||||| ||||||||| ||| ||| ||||     
T  11600901 gagaaccattatttttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttattattattttaccgttaagtgggtagaaatatttg 11600802  T
Q  133 ataattg--tgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
     ||| ||  | | | | ||  || | |||  ||||||||| |||||||||| ||||||||| |||| ||||||||||| || ||||||||||||    
T  11600801 gtaaatggtttagtaaatgggttaagcccgttaaggcattaagggttaagctcatttgagaggagcctatataagttccagtctttagagaaaa 11600708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 23150532 - 23150423
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta 109  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| | |||| ||| | ||  | ||||||||||||||||    
T  23150532 tgaggattatttttagtgttt-agtgagaaacattattttactaagttactagtgtggtaattaatagtgaatcgttaagacaacgttgttagtatttta 23150434  T
Q  110 -cgttaagtga 119  Q
     ||||||||||    
T  23150433 ccgttaagtga 23150423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 23225660 - 23225761
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||||||| || | ||||||||||||||  |  | ||||| |||||||||||||||    
T  23225660 gtgagaattatttttagtgttttagtgagaaccattatttcactaagttacttgtatagtaattagttgtgaaccatttagtgaccgttgttagtatttt 23225759  T
Q  109 ac 110  Q
    ||    
T  23225760 ac 23225761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 23158911 - 23158801
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||||| ||||  || | |||||  |||||| |||||||    
T  23158911 gtgaggattatttttagtgtttaat-gagaaccattattttactaagttattagtgtggtaattagtagtgaaccgttaagtgacagttgttggtatttt 23158813  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  23158812 accgttaagtga 23158801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 23151342 - 23151404
Alignment:
Q  12 aggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||||    
T  23151342 aggattatttttagtgttt-agtgagaaccattattttactaagttactggtgtagtaattagt 23151404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 23837955 - 23837890
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || |||||||||||| |||||||||||||||||| |||||||||    
T  23837955 gtgagaattatttttagtgttt-agtgagaaccattatcttactaagttactagtgtagtaattagt 23837890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 5855339 - 5855207
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| |||||| ||||||||| || ||||||||||||||||||||||||| |||||| | ||||||  |    || | ||| | |||||||||||||||    
T  5855339 gtgagaattattcttagtgttt-agtgagaaccattattttactaagttaccagtgtgcttattagtattttaccgttaagtaaccgttgttagtatttt 5855241  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtg 141  Q
    | ||||||| | ||| ||||||||||||||||||    
T  5855240 accgttaagagtgtagaaacattttataattgtg 5855207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 23242548 - 23242624
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgat 86  Q
    ||||||||||| |||||| || ||   ||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  23242548 tgaggattattattagtgcttaagtatgaaacattattttactaagttactagtgtgataattagttgtgagccgat 23242624  T

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Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 21493976 - 21494042
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||  |||||||||    
T  21493976 gtgagaattatttttagtgttt-agtgagaaccattattttactaagtcactagtgtactaattagtt 21494042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 20175325 - 20175363
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20175325 gagaaccattattttactaagttactagtgtggtaatta 20175363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 20220052 - 20220090
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20220052 gagaaccattattttactaagttactagtgtggtaatta 20220090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 18613122 - 18613056
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  18613122 gtgagaattatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 18613056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 15933946 - 15933852
Alignment:
Q  89 gtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagccc 182  Q
    |||| ||||||||||||||||| |||||| | ||| |||||||||| |||||||  ||||||  || |  |||||||||||||||| ||||||||    
T  15933946 gtgaccgttgttagtattttaccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaagtccactaaggcattaggtttaagccc 15933852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 17285961 - 17285896
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||| |||| || |||||||||||||||||||||||||||| ||  ||||||||    
T  17285961 gtgagaattatttttagcgttt-agtgagaaccattattttactaagttactagggtaataattagt 17285896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 22906783 - 22906829
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  22906783 ttagtgagaacccttattttactaagttactagtgtggtgattagtt 22906829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 30121412 - 30121366
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  30121412 ttagtgagaacccttattttactaagttactagtgtagtaattagtt 30121366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 38534404 - 38534339
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||| |||||||||||||||||||| || || ||||||    
T  38534404 gtgagaattatttttagtgttt-agtgagaaccgttattttactaagttactagagtagtgattagt 38534339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 15318712 - 15318759
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15318712 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 15318759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 15499081 - 15499128
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15499081 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 15499128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 22088347 - 22088394
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  22088347 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 22088394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 24105766 - 24105813
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  24105766 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 24105813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 3430817 - 3430863
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  3430817 ttagtgagaacctttattttactaagttactagtgtagtgattagtt 3430863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 6773824 - 6773870
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  6773824 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 6773870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 21191099 - 21191163
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||||||||| | | ||||||||| || |||||||||||||||| |||||||||    
T  21191099 gtgagaattatttttagtgtttt-gtgggaaccattactt-actaagttactagtgtagtaattagt 21191163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 24549670 - 24549624
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  24549670 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 24549624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 23511918 - 23511877
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  23511918 gagaacccttattttactaagttactagtgtagtgattagtt 23511877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 24908481 - 24908420
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgt 96  Q
    ||||||||||||||||||||||||||||  |||| |||| || |||| || | |||||||||    
T  24908481 gagaaccattattttactaagttactaggatggtgattaattttgagccggtaagtgatcgt 24908420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 24910702 - 24910641
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgt 96  Q
    ||||||||||||||||||||||||||||  |||| |||| || |||| || | |||||||||    
T  24910702 gagaaccattattttactaagttactaggatggtgattaattttgagccggtaagtgatcgt 24910641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 13661818 - 13661854
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  13661818 tttagtgagaacccttattttactaagttactagtgt 13661854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 13720481 - 13720517
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  13720481 tttagtgagaacccttattttactaagttactagtgt 13720517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 16038428 - 16038464
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  16038428 tttagtgagaacccttattttactaagttactagtgt 16038464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 16878292 - 16878336
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  16878292 ttagtgagaacctttattttactaagttactagtgtagtgattag 16878336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 17346235 - 17346199
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  17346235 tttagtgagaacccttattttactaagttactagtgt 17346199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 17353230 - 17353194
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  17353230 tttagtgagaacccttattttactaagttactagtgt 17353194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 9e-85; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 21110486 - 21110244
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21110486 aaattcatgtgagggttatttttagtgtttaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgataagtgatcgttgtt 21110387  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||||| || | ||||||||||||||||||||||||||||| |||| |||| |||    
T  21110386 agtattttatcgttaagtgagtaaaaacattttagaattgggaatgagtgagttaagcccactaaggcattagggttaagcccattggagaggagcctat 21110287  T
Q  200 ataagttctagactttagagaaaataggacttcatttcatttc 242  Q
    ||||   || | ||| |||||||||||| ||||||||||||||    
T  21110286 ataaacccttgtcttaagagaaaataggtcttcatttcatttc 21110244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 26559335 - 26559570
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  26559335 aaattcatgtgaggattatttttagtg--------agaaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatcgttgtt 26559426  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
    | ||||||| |||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||| |||| |||| |||    
T  26559427 aatattttaccgttaagtgagtaaaaacattttagaattgtgaatgagtgagttaagcccactaaggcattagggttaagcccattggagaggagcctat 26559526  T
Q  200 ataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    ||||   || | ||| |||||||||||| |||||||||||||||    
T  26559527 ataaacccttgtcttaagagaaaataggtcttcatttcatttca 26559570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 5621299 - 5621550
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||||    
T  5621299 aaattcatgtgaggattatttttagtgttttagtgagaaccattattttactaagttactagtgtgataattagttgcgagtcggtaagtgatcgttgtt 5621398  T
Q  101 agtattttac--------gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaag 192  Q
    ||||||||||        ||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||| |||| |    
T  5621399 agtattttaccgttaaaggttaagtgagtaaaaacattttagaattgtgaatgagtgagttaagcccactaaggcattagggttaagcccattggagagg 5621498  T
Q  193 agcttatataagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    |  ||||||||   || |  || | |||||||||| ||||||||||||||||    
T  5621499 atattatataaacccttgttttaaaagaaaataggtcttcatttcatttcac 5621550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 19874497 - 19874253
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| |||||||| ||||| |||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  19874497 aaattcatggtgaggattctttttggtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttg 19874398  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagc 195  Q
    ||| ||||||| ||||||||||||| |||||||||| |||| |||||||||||| || | ||||||||||| || |||||||||||||||||||| ||||    
T  19874397 ttattattttaccgttaagtgagtagaaacattttagaattagtgaatgagtgagttaagcccactaaggcaataagggttaagcccatttgagaggagc 19874298  T
Q  196 ttatataagttctagactttagag-aaaataggacttcatttcat 239  Q
     ||||||||||||||||||||||| ||||||||  ||||||||||    
T  19874297 ctatataagttctagactttagagaaaaataggttttcatttcat 19874253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 16834805 - 16835053
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttt-agcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| |||| ||||||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||| |||| || | |||||||||||    
T  16834805 aaattcatggtgagaattatttttagtgtttcgagtgagaaccattattttgctaagttactagtgtggtaattagttatgagccggtaagtgatcgttg 16834904  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatta-gggttaagcccatttgagaagagc 195  Q
    ||| ||||||| ||| ||||||||| |||||||||  |||| |||||||||||| || |  |||||||||||||| |||||||||||||||| || ||||    
T  16834905 ttattattttaccgtcaagtgagtagaaacatttttgaattagtgaatgagtgagttaagtccactaaggcattaggggttaagcccatttgggaggagc 16835004  T
Q  196 ttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
     ||||||| || |||||||||||| ||||||||  ||||||||||||||    
T  16835005 ctatataatttatagactttagagaaaaataggttttcatttcatttca 16835053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 23417946 - 23417737
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || |||| |||||| ||||||| ||||||| ||||||||||||| |||||||||     
T  23417946 gagaaccattattttactaagttactggtgtggtaattagtttttagccgataagtgattgttgttattattttaccgttaagtgagtagaaacattttt 23417847  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggact 230  Q
     |||| || ||||||||| |||| |||| ||||||||| |||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||||  |    
T  23417846 gaattagttaatgagtgagttgagcccattaaggcattaagggttaagcccatttgagaggagcctatataagttctagtctttagagaaaaataggttt 23417747  T
Q  231 tcatttcatt 240  Q
    ||||||||||    
T  23417746 tcatttcatt 23417737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 29918797 - 29918601
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||| |||||||||||||| | | |||| ||||||||||||||||||||||||||| ||| |||||||||| |||| ||||| ||||||||||||||    
T  29918797 gtgaggagtatttttagtgtttcaagtgagagccattattttactaagttactagtgtgataaatagttgtgagccgataagtgaccgttgttagtattt 29918698  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||| ||| |||||||||| |||||||| || |||  || | ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  29918697 taccgttaagtgtgtagaaacattttagaattgtgattgggtgggttaagcccactaaggcattagggttaagcccatttgagaatagcctatataa 29918601  T

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Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 6457332 - 6457136
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    |||||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||| || | ||||| |||||||||||||    
T  6457332 gtgaggattatttt-agtgtttcaagcgagaaccattatttttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtatt 6457234  T
Q  107 ttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    |||| |||||||| ||| |||||||||| |||||||| ||||||  || | || |||||||||||||||||||||| ||||||||| ||| |||||||    
T  6457233 ttaccgttaagtgtgtagaaacattttagaattgtgattgagtgggttaagccaactaaggcattagggttaagcctatttgagaatagcctatataa 6457136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 22886347 - 22886167
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||  || | ||||| |||||||||||||||    
T  22886347 gtgagaattatttttagtgttttagtgagaaacattattttactaagttactagtgtggtaaatagttgtgaaccggtaagtgaccgttgttagtatttt 22886248  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttga 188  Q
    | ||||||||| ||| |||||||||| |||||||| || |||  || | |||||||||| ||||||||| |||||||||||    
T  22886247 atcgttaagtgtgtagaaacattttagaattgtgattgggtgggttaagcccactaaggaattagggttgagcccatttga 22886167  T

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Target: chr5; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 23234029 - 23234249
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | |  |||| |||||| |||||||||||||||||||||||||||||||||| |  | ||||| |||||||| |||||    
T  23234029 gtgaggattatttttagtgtttcaagtaagaatcattatcttactaagttactagtgtggtaattagttgtgagccagtaagtgaccgttgttattattt 23234128  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| || ||||||||| ||| |||||| |||| | |  ||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||      
T  23234129 tactgtgaagtgagtagaaatattttagaattagagtttgagtgagttaagcccactaaggcattagggttaagcccatttgagaagagcctatataaac 23234228  T
Q  206 tctagactttagagaaaatag 226  Q
    ||| | |||||||||||||||    
T  23234229 tcttgtctttagagaaaatag 23234249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 37984101 - 37983916
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagt-------cgatgagtgatcgttgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||       || | ||||| |||||||    
T  37984101 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtagtaattagttgttagtattttaccgttaagtgaccgttgtt 37984002  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    ||||| ||| ||||||| | ||| |||||||||| | |||||  ||||||  || |  ||||||||||||||||||||||||||||    
T  37984001 agtatcttaccgttaagagtgtagaaacattttagagttgtgtttgagtgggttaagtccactaaggcattagggttaagcccatt 37983916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11966071 - 11965964
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  11966071 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttg 11965972  T
Q  99 ttagtatt 106  Q
    ||| ||||    
T  11965971 ttattatt 11965964  T

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Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 21215957 - 21216084
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||| ||||||| |||||||||| || | |||||||||| |||||||||    
T  21215957 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagggtggtaaatagttgtgagccggtaagtgatcgttattagtattt 21216056  T
Q  108 ta-cgttaagtgagtaaaaacattttat 134  Q
    || | ||||||| ||| |||||||||||    
T  21216057 taccattaagtgtgtagaaacattttat 21216084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 21222129 - 21222259
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |    || | ||||| |||||||||||||||    
T  21222129 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagtgtggtaattagtattttaccgttaagtgaccgttgttagtatttt 21222227  T
Q  109 a-cgttaagtgagtaaaaacattttataattg 139  Q
    | ||||||| ||||| |||||||||| |||||    
T  21222228 accgttaagagagtagaaacattttagaattg 21222259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 5450332 - 5450442
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | ||||||||||||||  || | ||||| | |||||||||||||    
T  5450332 gtgaggattatttttagtgttttagtgagaatcattattttactaagttacttgtatagtaattagttgtgaaccgttaagtga-ctttgttagtatttt 5450430  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  5450431 atcgttaagtga 5450442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 32358839 - 32358765
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || | | |||||||||||| |||||||    
T  32358839 gagaaccattattttactaagttactagtgtgataattagttgtgagccggtaactgatcgttgttattatttta 32358765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 32965232 - 32965296
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  32965232 gtgagaattatttttagtgttttagtgagaaccattattttactaagttactagggtagtaatta 32965296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 24224866 - 24225042
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| ||||||||||||||||  | ||||||||||||||| ||| ||||||||||||||| ||||||  |    || | ||||| ||||||||||||||    
T  24224866 gtgagaattatttttagtgtttg-gtgagaaccattatttttactcagttactagtgtggttattagtattttaccgttaagtgaccgttgttagtattt 24224964  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    || ||||||| | || ||||||||||| |||||||  ||||||  || |  ||||||||||||||||| ||||||||||    
T  24224965 taccgttaagagtgtgaaaacattttagaattgtgtttgagtgggttaagtccactaaggcattaggg-taagcccatt 24225042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 7529634 - 7529574
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||| ||||||||||    
T  7529634 attatttttagtgtat-agtgagaaccattattttactaagttactagtgtagtaattagtt 7529574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 11763017 - 11763142
Alignment:
Q  10 tgaggattatttt-tagtgtttt-agcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| ||||||| ||||||||| || |||||||||||||||| |||||||||| ||||||| ||||||||||  |  | |||||||||| ||| | |||    
T  11763017 tgagggttattttgtagtgttttgagtgagaaccattattttattaagttactaatgtggtatttagttgtgaaccagtaagtgatcgtttttattgttt 11763116  T
Q  108 ta-cgttaagtgagtaaaaacatttt 132  Q
    || |||||| |||||||||| |||||    
T  11763117 taccgttaaatgagtaaaaatatttt 11763142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 3674619 - 3674552
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| || |||||||||    
T  3674619 tgtgagaattatttttactgttttagtgagaacccttattttactaaattactagggtagtaattagt 3674552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 23494635 - 23494597
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagtta 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23494635 ttttagtgttttagcgagaaccattattttactaagtta 23494597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 3420514 - 3420559
Alignment:
Q  5 tcatgtgaggattatttttagtgttttagcgagaaccattatttta 50  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  3420514 tcatgtgaggattatttttagtgttttagtgagaaccataatttta 3420559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 11965948 - 11965913
Alignment:
Q  160 actaaggcattagggttaagcccatttgagaagagc 195  Q
    ||||||||||||||||||||||||||||||||||||    
T  11965948 actaaggcattagggttaagcccatttgagaagagc 11965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 17910231 - 17910165
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  17910231 gtgagaattatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 17910165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 13065 - 13019
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  13065 ttagtgagaacccttattttactaagttactagtgtagtaattagtt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 5450438 - 5450536
Alignment:
Q  88 agtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||||||| |||||||||||| |||||| | |||||||||||||| |||| ||  ||||||  || |  |||||||||||||| ||||| |||||||    
T  5450438 agtgatcgttattagtattttaccgttaagagtgtaaaaacattttagaattatgtttgagtgggttaagtccactaaggcattaaggttaggcccatt 5450536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 16106363 - 16106316
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  16106363 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 16106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 17471144 - 17471191
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  17471144 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 17471191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 4199546 - 4199592
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  4199546 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 4199592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 11343393 - 11343347
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  11343393 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 11343347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 18777549 - 18777595
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  18777549 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 18777595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 19500571 - 19500525
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  19500571 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 19500525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 22882640 - 22882686
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  22882640 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 22882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 24084645 - 24084599
Alignment:
Q  157 cccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    |||||| |||||||||||||||| ||||||||||| ||| |||||||    
T  24084645 cccacttaggcattagggttaagtccatttgagaatagcctatataa 24084599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28902936 - 28902883
Alignment:
Q  19 tttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||| || ||||||| |||||||||||||||||||| || |||||||    
T  28902936 tttttagtgttt-agtgagaaccgttattttactaagttactagagtagtaatta 28902883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28939331 - 28939278
Alignment:
Q  19 tttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||| || ||||||| |||||||||||||||||||| || |||||||    
T  28939331 tttttagtgttt-agtgagaaccgttattttactaagttactagagtagtaatta 28939278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 43442959 - 43443005
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  43442959 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 43443005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 9729920 - 9729961
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  9729920 gagaacccttattttactaagttactagtgtagtgattagtt 9729961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 7729169 - 7729110
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||| ||||||||||| || | |||||||||||||||||||||||| | || |||||||||    
T  7729169 attacttttagtgttt-agggggaaccattattttactaagttactggagtagtaattagt 7729110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 23515261 - 23515225
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  23515261 tttagtgagaacccttattttactaagttactagtgt 23515225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 24616984 - 24616952
Alignment:
Q  30 ttagcgagaaccattattttactaagttactag 62  Q
    |||||||||||| ||||||||||||||||||||    
T  24616984 ttagcgagaacccttattttactaagttactag 24616952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 24746243 - 24746211
Alignment:
Q  30 ttagcgagaaccattattttactaagttactag 62  Q
    |||||||||||| ||||||||||||||||||||    
T  24746243 ttagcgagaacccttattttactaagttactag 24746211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 30701 - 30457
Alignment:
Q  2 aattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtta 101  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || | | ||||||||||      
T  30701 aattcatgtgaggattatttttagtgttttagtgagaaccattattttgctaagttactagtgtggtaattagttgtgagccggtaaatgatcgttgtat 30602  T
Q  102 gtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
     |||||||| |||||||||||| |||||||||| |||| |||||||||||  || | ||||||||||||||||||||||||||||||||| ||||| |||    
T  30601 ttattttaccgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccactaaggcattagggttaagcccatttgagtagagcctat 30502  T
Q  200 ataagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||    
T  30501 ataagttatagactttagagaaaataggtcttcatttcatttcac 30457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 22719 - 22490
Alignment:
Q  17 tatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gtta 114  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  22719 tatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatcgttgttagtattttaccgtta 22620  T
Q  115 agtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagactt 214  Q
     ||||||| |||||||||| |||||||||||||||  || | |||| |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  22619 ggtgagtagaaacattttagaattgtgaatgagtgggttaagcccagtaagtcattagggttaagctcatttgagtagagcctatataagttctagactt 22520  T
Q  215 tagagaaaataggacttcatttcatttcac 244  Q
    ||||||||||||| ||||||||||||||||    
T  22519 tagagaaaataggtcttcatttcatttcac 22490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 241
Target Start/End: Complemental strand, 132540 - 132308
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| |||||||||||||||    
T  132540 gtgaggattatttttagtatct-agcgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtatttt 132442  T
Q  109 ac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttc 207  Q
    || |||||||| | | |||||||||| |||||||| |||||| ||| | ||||||||||||||||||||||| ||| ||||| ||||| |||||||||||    
T  132441 accgttaagtgtgcagaaacattttagaattgtgagtgagtggattaagcccactaaggcattagggttaagtccaattgagtagagcctatataagttc 132342  T
Q  208 tagactttagagaaaataggacttcatttcattt 241  Q
    |||||||||||||||||||| |||||||||||||    
T  132341 tagactttagagaaaataggtcttcatttcattt 132308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 67508 - 67691
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||  | | |||||||||||||| ||||||| ||||||||||||| |||||||||     
T  67508 gagaaccattattttactaatttactagtgtggtaattagttttgagctggtaagtgatcgttgttattattttaccgttaagtgagtataaacattttt 67607  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
     |||| || ||||||||| |||| |||| ||       |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||    
T  67608 gaattagttaatgagtgagttgagcccatta-------agggttaagctcatttgagaggagcctatataagttctagtctttagagaaaa 67691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 11639028 - 11638790
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||| || | ||||||||||||   |||||    
T  11639028 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtgataattagttgtgagccggtaagtgatcgttgtatttattt 11638929  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| |||||||||||| |||||||||| |||| |||||||||||  || | ||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  11638928 taccgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccactaagacattagggttaagcccgtttgagaagagcctatataagt 11638829  T
Q  206 tctagactttagagaaaataggacttcatttcatttcac 244  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  11638828 tctagactttagagaaaatagatcttcatttcatttcac 11638790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 21166586 - 21166837
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||||    
T  21166586 aaattcatgtgaggattatttttagtgttttagtgagaaccattattttactaagttactagtgtgataattagttgcgagtcggtaagtgatcgttgtt 21166685  T
Q  101 agtattttac--------gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaag 192  Q
    ||||||||||        ||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||| |||| |    
T  21166686 agtattttaccgttaaaggttaagtgagtaaaaacattttagaattgtgaatgagtgagttaagcccactaaggcattagggttaagcccattggagagg 21166785  T
Q  193 agcttatataagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    |  ||||||||   || |  || | |||||||||| ||||||||||||||||    
T  21166786 atattatataaacccttgttttaaaagaaaataggtcttcatttcatttcac 21166837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 43427021 - 43427247
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||||||    
T  43427021 aaattcatggtgaggtttatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattaattgtgagccggtaagtgatcgttg 43427120  T
Q  99 ttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| |||||||| |||||||||||| |||||||||| |||| |||||||||||| || | |||||||||||||||||||||||||||||||||| ||||     
T  43427121 ttattattttaccgttaagtgagtagaaacattttagaattagtgaatgagtgagttaagcccactaaggcattagggttaagcccatttgagatgagcc 43427220  T
Q  197 tatataagttctagactttagagaaaa 223  Q
    |||||||||||||||||||||||||||    
T  43427221 tatataagttctagactttagagaaaa 43427247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 31411157 - 31411393
Alignment:
Q  10 tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||||    
T  31411157 tgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttattatttt 31411256  T
Q  109 a-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagtt 206  Q
    | ||||||||||||| |||||||||  |||| |||||||||||| || | ||||||||||||||||||||||| |||||||| |||||| |||||||  |    
T  31411257 accgttaagtgagtagaaacatttttgaattagtgaatgagtgagttaagcccactaaggcattagggttaagtccatttgaaaagagcctatataaact 31411356  T
Q  207 ctagactttagagaaaataggacttcatttcatttca 243  Q
    || | ||||||| |||||||  |||||||||||||||    
T  31411357 cttgtctttagataaaatagatcttcatttcatttca 31411393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 41662299 - 41662065
Alignment:
Q  4 ttcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagt 103  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||   |    
T  41662299 ttcatgtgaggattatttttagtgttttagtgagaatcattattttactaagttactagtgtgataattagttgtgagtcggtaagtgatcgttgtattt 41662200  T
Q  104 atttta-cgttaagtgagtaaaaacattttataa-ttgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatat 201  Q
    |||||| ||||||||||||| |||||||||| || |||||||||||||  || | |||||||| | |||||| ||||||||||| ||||||||| |||||    
T  41662199 attttatcgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccactaaagtattaggattaagcccattggagaagagcctatat 41662100  T
Q  202 aagttctagactttagagaaaataggacttcattt 236  Q
    ||   |  | ||| |||||||||||| ||||||||    
T  41662099 aaacccctgtcttaagagaaaataggtcttcattt 41662065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 38375240 - 38375431
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||||| |||||||||     
T  38375240 gagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttagtattttaccgttaagtgagtagaaacattttt 38375339  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
     |||| ||||| |||||| || | || |||||||| || |||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  38375340 gaattagtgaacgagtgagttaagccgactaaggcaataagggttaagcccatttgagaggagcctatataagttctagtctttagagaaaa 38375431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 10913601 - 10913397
Alignment:
Q  23 tagtgttt-tagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgag 120  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||| ||||| |||||    
T  10913601 tagtgtttctagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttagtattttaccgttacgtgag 10913502  T
Q  121 taaaaacattttataatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttaga 218  Q
    || |||||||||  |||| |||||||||||| || | ||||||||||| || || ||||||||| ||||||| |||| |||||||| ||||| |||||||    
T  10913501 tagaaacatttttgaattagtgaatgagtgagttaagcccactaaggcaataagagttaagcccctttgagaggagcctatataagctctagtctttaga 10913402  T
Q  219 gaaaa 223  Q
    |||||    
T  10913401 gaaaa 10913397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 50313944 - 50313748
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||  |  | |||||||||||||||||||     
T  50313944 gtgaggatt-tttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgaaccagtaagtgatcgttgttagtatta 50313846  T
Q  108 ta-cgttaagtgagtaaaaacatttta-taattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||||||| ||||||||||  |||||||||||||||  || |  ||||||||||||||||||||||||||||||||| | || |||||||    
T  50313845 taccgttaagtgagtagaaacattttagaaattgtgaatgagtgggttaagtccactaaggcattagggttaagcccatttgagaggggcctatataa 50313748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 4145603 - 4145771
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaac 127  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||||||| || | ||||| |||||||||||||||| ||||||||| ||| ||||    
T  4145603 tttagtgagaaccattattttactaagttactagtgtggtaaatggttgtgagccggtaagtgaccgttgttagtattttatcgttaagtgtgtagaaac 4145702  T
Q  128 attttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    |||||| | |||||| ||||||  || | ||||||||||||||||||||||||||||||||||| ||||    
T  4145703 attttagagttgtgattgagtgggttaagcccactaaggcattagggttaagcccatttgagaatagct 4145771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 203
Target Start/End: Original strand, 6224632 - 6224800
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttat 134  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| |||||||||||||||| ||||||||| ||| ||||||||||     
T  6224632 agaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgtagaaacattttag 6224731  T
Q  135 aattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    |||||||| |||||| ||| |  ||||||||||||||||||||| | |||||||||| ||| |||||||    
T  6224732 aattgtgattgagtggattaagtccactaaggcattagggttaaactcatttgagaatagcctatataa 6224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 18970649 - 18970469
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||| || | ||| | |||||||||||||||    
T  18970649 gtgatgattatttttagtgttatagtgagaaccattattttactaagttattagtgtggtaaatagttgtgagccgttaagtcaccgttgttagtatttt 18970550  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgaga 190  Q
    | ||||||||  ||| |||||||||| |||||||| | ||||  || | ||||||||||||||||||||||||||| ||||||    
T  18970549 accgttaagt--gtagaaacattttaaaattgtgagtaagtgggttaagcccactaaggcattagggttaagcccaattgaga 18970469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 33368458 - 33368645
Alignment:
Q  17 tatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaa 115  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||  ||| |||||||||  || | |||||||||||||||||||||| ||||||    
T  33368458 tatttttagtgttttagtgagaaccattattttattaagttactagtgtaataaatagttgtgaaccggtaagtgatcgttgttagtattttaccgttaa 33368557  T
Q  116 gtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    ||| ||| |||||||||| |||||||| || |||  || | |||||||||||||||||||| ||| |||||||||  ||| |||||||    
T  33368558 gtgtgtataaacattttagaattgtgattgggtgggttaagcccactaaggcattagggttgagctcatttgagagtagcctatataa 33368645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 8605548 - 8605355
Alignment:
Q  11 gaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta- 109  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| || | ||||| | |||||| |||||||     
T  8605548 gaggattatttt-agtgttttagtgggaaccattattttactaagttactagtgtagtaattagttgtgagccggtaagtgacccttgttattattttac 8605450  T
Q  110 cgttaagtgagtaaaaacatttta-taattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    ||||||||||||| ||||||||||  ||||||| ||||||   || | |||||||||||||||| ||||||| |||||||||| ||| |||||||    
T  8605449 cgttaagtgagtagaaacattttagaaattgtgtatgagtaggttaagcccactaaggcattagagttaagctcatttgagaatagcctatataa 8605355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 40038474 - 40038665
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaaca-tttt 132  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||||  |||||| ||||||||| | | ||||| ||||    
T  40038474 gagaaccattattttactaagttactagtgtggtaattagttttgagccggtaagtgatcgttgttataattttaccgttaagtgcggagaaacattttt 40038573  T
Q  133 ataattgtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
      ||| | |||||||| | || | ||||||||||| || |||||||||||||||||||| || | |||||||||||||| ||||||||||||    
T  40038574 gaaatagcgaatgagttagttaagcccactaaggcaataagggttaagcccatttgagaggaacctatataagttctagtctttagagaaaa 40038665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 25103534 - 25103746
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||| |||||||||||||||||| |||| |||| ||||| || | | ||||||| |||| ||||||| | ||||||||||| |||||||||     
T  25103534 gagaaccattatcttactaagttactagtgtagtaactagtcgtgagccggtaaatgatcgtcgttattattttaccattaagtgagtagaaacattttt 25103633  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggact 230  Q
     |||| || ||||||||| |||| | || ||||||||| ||||||||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  |    
T  25103634 gaattagttaatgagtgagttgagctcattaaggcattaagggttaagcccaattgagaggagcctatataagttctagtctttaaagaaaaataggttt 25103733  T
Q  231 tcatttcatttca 243  Q
    |||||||||||||    
T  25103734 tcatttcatttca 25103746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 17586486 - 17586644
Alignment:
Q  46 ttttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaat 144  Q
    ||||||||||||||||||||||||| |||||||||| || | ||||| |||||||| |||||||| ||||| || | |||||||||||| |||| ||| |    
T  17586486 ttttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttactattttaccgttaaatgtgcaaaaacattttagaattttgatt 17586585  T
Q  145 gagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    |||||| || | ||||||||| ||||||||||||||||| ||||||| ||| |||||||    
T  17586586 gagtgagttaagcccactaagacattagggttaagcccaattgagaatagcatatataa 17586644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 37914837 - 37915028
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||| ||||||||||||||| || || |||| || | |||||||||||||| ||||||| |||||| |||||| |||||||||     
T  37914837 gagaaccattattttactaatttactagtgtggtaactaattttgagccggtaagtgatcgttgttattattttaccgttaaatgagtataaacattttt 37914936  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
     ||||  ||||||||||| || | ||||||||||| || |||||||||| ||||||||| |||| | ||||| || ||| ||||||| ||||    
T  37914937 gaattaatgaatgagtgagttaagcccactaaggcaataagggttaagctcatttgagaggagcctgtataaattatagtctttagataaaa 37915028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 12530996 - 12531119
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagta-ttt 107  Q
    |||||||||||||| ||| ||  || ||||||||||||||||||||||||||| |||||||||| |||||||| || | |||||||||| ||| || |||    
T  12530996 gtgaggattattttcagttttcaagtgagaaccattattttactaagttactattgtggtaatttgttgtgagccggtaagtgatcgttattattatttt 12531095  T
Q  108 tac-gttaagtgagtaaaaacatt 130  Q
    ||| |||||||||||| |||||||    
T  12531096 tactgttaagtgagtagaaacatt 12531119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 17758233 - 17758354
Alignment:
Q  115 agtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagact 213  Q
    |||||||| |||||||||| |||| |||| ||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||  ||| | |     
T  17758233 agtgagtagaaacattttagaattagtgattgagtgagttaagcccactaaggcattagggttaagcccatttgagaagagcctatataaactcttgtc- 17758331  T
Q  214 ttagagaaaataggacttcattt 236  Q
    ||||||||||||||  |||||||    
T  17758332 ttagagaaaataggttttcattt 17758354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 19059553 - 19059674
Alignment:
Q  115 agtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagact 213  Q
    |||||||| |||||||||| |||| |||| ||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||  ||| | |     
T  19059553 agtgagtagaaacattttagaattagtgattgagtgagttaagcccactaaggcattagggttaagcccatttgagaagagcctatataaactcttgtc- 19059651  T
Q  214 ttagagaaaataggacttcattt 236  Q
    ||||||||||||||  |||||||    
T  19059652 ttagagaaaataggttttcattt 19059674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 34560584 - 34560411
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| ||  |||||  |    || | ||||| | |||||||||||||    
T  34560584 gtgagaattatttttagtgttttagtgagaaccattattttattaagttactagtgtagttgttagtattttaccgttaagtgaccattgttagtatttt 34560485  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcc 181  Q
    | ||||||| | ||| |||||||||| |||||||  ||||||  || |  | ||||||||||||||||||||||    
T  34560484 accgttaagagtgtagaaacattttaaaattgtgtttgagtgtgttaagtcaactaaggcattagggttaagcc 34560411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 13300964 - 13301063
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||  ||||| ||||||||| ||||  || | ||||| |||||||||||||||    
T  13300964 gtgaggattatttttagtgttt-agtgagaaccattattttactaagttatgagtgtagtaattagtggtgaaccgtttagtgaccgttgttagtatttt 13301062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 13311620 - 13311719
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||  ||||| ||||||||| ||||  || | ||||| |||||||||||||||    
T  13311620 gtgaggattatttttagtgttt-agtgagaaccattattttactaagttatgagtgtagtaattagtggtgaaccgtttagtgaccgttgttagtatttt 13311718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 4161768 - 4161889
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaac 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||| | |||||||   | | ||||  |||||||||||||||| ||||||||| ||| ||||    
T  4161768 tttagtgagaaccattattttactaagttactaatgtggtaagtggttgtgaactggtaagtggccgttgttagtattttaccgttaagtgtgtagaaac 4161867  T
Q  128 attttataattgtgaatgagtg 149  Q
    |||||| | |||||| ||||||    
T  4161868 attttagagttgtgattgagtg 4161889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 19306538 - 19306470
Alignment:
Q  9 gtgaggattatttttagtgttttagcg--agaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||    
T  19306538 gtgaggattatttttagtgttttagtgtgagaaccattattttactaagttactagtgtagtaattagt 19306470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 3575954 - 3576019
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  3575954 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagtgttgtaattagt 3576019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 9590253 - 9590321
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgt 78  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||||||| || ||||||||||||    
T  9590253 gtgaggattagttttagtgttt-agtgagaaccattattttactaagttactagcgtagtaattagttgt 9590321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 14285701 - 14285635
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||    
T  14285701 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttaccagtgtagtaattagtt 14285635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 38810506 - 38810556
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttact 60  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  38810506 tgaggattatttttagtgttttagtgagaaccattattttgctaagttact 38810556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 11881712 - 11881776
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||    
T  11881712 tgagaattatttttagtgttt-agcgaggaccattattttgctaagttactagtgtagtaattagt 11881776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 12032261 - 12032202
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| || |||||||||    
T  12032261 attatttttagtgttt-agtgagaaccattattttactaagttactagagtagtaattagt 12032202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 17205428 - 17205365
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||| || |||||||    
T  17205428 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagggtagtaatta 17205365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 22275910 - 22275850
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||||||| || |||||||    
T  22275910 attatttttaatgttt-agcgagaacccttattttactaagttactagtgtagtgattagtt 22275850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 11060501 - 11060564
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| |||||||||||||||| || ||||||| |||||||||||||||||||| || |||||||    
T  11060501 gtgagaattatttttagtgttt-agtgagaaccgttattttactaagttactagagtagtaatta 11060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 11476718 - 11476773
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  11476718 gtgagaattatttttaatgttt-agtgagaaccattattttactaagttactagtgt 11476773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 38168650 - 38168604
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactag 62  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  38168650 attatttttagtgttt-agtgagaaccattattttactaagttactag 38168604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 14058737 - 14058794
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggt 68  Q
    |||| |||||||||||||||| || ||||||| |||||||||||||||||||| |||||    
T  14058737 tgagaattatttttagtgttt-agtgagaaccgttattttactaagttactagagtggt 14058794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 16933515 - 16933556
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  16933515 gagaacccttattttactaagttactagtgtggtgattagtt 16933556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 9302663 - 9302730
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| |||||||||| | ||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  9302663 tgtgagaattatttttaatattt-agtgagaacccttattttactaagttactagtgtagtgattagtt 9302730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 14814387 - 14814479
Alignment:
Q  111 gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    |||||||| ||| |||| ||||| |||||||| || |||  || | |||| ||||| ||||||||| |||||||||||||| ||| |||||||    
T  14814387 gttaagtgtgtagaaactttttagaattgtgattgggtgggttaagcccaataaggtattagggttgagcccatttgagaatagcctatataa 14814479  T

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Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 14842126 - 14842162
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14842126 tttagcgagaacccttattttactaagttactagtgt 14842162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 18911692 - 18911645
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  18911692 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 18911645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 23493078 - 23493031
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  23493078 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 23493031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 49233139 - 49233092
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  49233139 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 49233092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 8268291 - 8268337
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  8268291 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 8268337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 8275391 - 8275437
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  8275391 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 8275437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 11403333 - 11403272
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattat--tttactaagttactagtgtggt 68  Q
    ||||||||||||||||||| || || ||||||||||||  |||||| ||||||||| |||||    
T  11403333 gtgaggattatttttagtgcttaagtgagaaccattattatttactgagttactagcgtggt 11403272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 12257368 - 12257414
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  12257368 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 12257414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 13954458 - 13954504
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  13954458 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 13954504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 15879124 - 15879059
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||| || |||||||||||| |||| || |||||||||    
T  15879124 gtgagaattatttttagtgttt-agtgagaaccgttgttttactaagttcctagggtagtaattagt 15879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 17062252 - 17062206
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  17062252 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 17062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 27840917 - 27840871
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  27840917 ttagtgagaacccttattttactaagttaccagtgtagtaattagtt 27840871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 45861500 - 45861454
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  45861500 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 45861454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 12901658 - 12901699
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  12901658 gagaacccttattttactaagttactagtgtcgtgattagtt 12901699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 15467916 - 15467957
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  15467916 gagaacccttattttactaagttactagtgtagtgattagtt 15467957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 39657272 - 39657228
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttact 60  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||    
T  39657272 attatttttagtgttt-agtgagaaccattattttgctaagttact 39657228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12559733 - 12559796
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattt-tactaagttactagtgtggtaatt 72  Q
    ||||||||||||||||||| | ||| ||||||| |||||| |||||||||||||| || ||||||    
T  12559733 gtgaggattatttttagtg-tctagtgagaaccgttatttatactaagttactagagtagtaatt 12559796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 44229687 - 44229651
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  44229687 tttagtgagaacccttattttactaagttactagtgt 44229651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 48422304 - 48422241
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| |||| |||||||| || || ||||||| |||||||||||||||||||| || |||||||    
T  48422304 gtgagaattacttttagtggtt-agtgagaaccgttattttactaagttactagggtagtaatta 48422241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 33398076 - 33397838
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||    
T  33398076 gtgagaattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttattattt 33397977  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || ||||||||||||| |||||||||| |||| |||||||||||| || | ||||||||||||||||||||| ||| |||||||| |||| |||||||||    
T  33397976 taccgttaagtgagtagaaacattttagaattagtgaatgagtgagttaagcccactaaggcattagggttatgcctatttgagaggagcctatataagt 33397877  T
Q  206 tctagactttagag-aaaataggacttcatttcatttca 243  Q
    |||||||||||||| ||||||||  ||||||||||||||    
T  33397876 tctagactttagagaaaaataggttttcatttcatttca 33397838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 40435776 - 40436026
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||| |||||||||  | |||||||||||    
T  40435776 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactattgtggtaattaattgtgagtcagtaagtgatcgttg 40435875  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatccc---actaaggcattagggttaagcccatttgagaaga 193  Q
    ||| ||||||| ||||||||||||| ||| |||||| |||| ||||||||||   || | |||   ||||||||||||||||||||||||||||||||||    
T  40435876 ttattattttaccgttaagtgagtagaaatattttagaattagtgaatgagtaggttaagcccactactaaggcattagggttaagcccatttgagaaga 40435975  T
Q  194 gcttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
    |||||||||||||||||||||||||| |||| |||  ||||||||||||||    
T  40435976 gcttatataagttctagactttagagaaaaagaggctttcatttcatttca 40436026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 5470498 - 5470744
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||||||| |||||||||||||||||||||| | | |||||||||||    
T  5470498 aaattcatgtgaggattatttttagtgttttagtgtaaatcattattttactaagttactattgtggtaattagttgtgagtcggtaaatgatcgttgtt 5470597  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctta 198  Q
    ||||||||| |||||||||| || |||||||||| ||||   |  ||||||  || | |||||||| |||||||||||||||||||||||| ||||| ||    
T  5470598 agtattttaccgttaagtgaatagaaacattttagaattaaagtttgagtgggttaagcccactaaagcattagggttaagcccatttgagtagagccta 5470697  T
Q  199 tataagttctagactttagag-aaaataggacttcatttcatttcac 244  Q
    |||||||| ||||||| |||| ||||||||  | |||||||||||||    
T  5470698 tataagttttagacttgagagaaaaataggtttacatttcatttcac 5470744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 5767687 - 5767916
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||    
T  5767687 gtgaggattatttttagtgtttcaagggagaatcattattttactaagttactagtgtggtaattagttgtgagctgataagtgatcgttgttattattt 5767786  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || ||||||||||||| |||||||||| |||| |||| ||||||| || | |||||||||||||||||||||| ||||||| |||||||| |||||||      
T  5767787 taccgttaagtgagtagaaacattttagaattagtgattgagtgagttaagcccactaaggcattagggttaaacccatttaagaagagcctatataaac 5767886  T
Q  206 tctagactttagagaaaataggacttcattt 236  Q
    ||| | | ||||||||||||||  |||||||    
T  5767887 tcttg-ccttagagaaaataggttttcattt 5767916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 21195731 - 21195536
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||  | | ||||| |||||||||||||||    
T  21195731 gtgaggattatttttagtgttttagtgtgaaccattattttactaagttactagtgtggtaaatagttgtgagctggtaagtgaccgttgttagtatttt 21195632  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | ||||||||| ||| |||||||||| |||||| | || |||| || | |||||||||||||||||||| |||||||||||||| ||| |||||||    
T  21195631 accgttaagtgtgtagaaacattttagaattgtaattgggtgagttaagcccactaaggcattagggttgagcccatttgagaatagcctatataa 21195536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 75962 - 76152
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||||||| ||||||| ||||||||||||| |||||||||     
T  75962 gagaaccattattttactaagttactagtgtggtaattagttttgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaacattttt 76061  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttagagaaa 222  Q
     |||| |||||||||||| || | || |||||||| || |||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  76062 gaattagtgaatgagtgagttaagcctactaaggcaataagggttaagcccatttgagatgagcctatataagttctagtctttagagaaa 76152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 18851901 - 18852100
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||| ||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  18851901 aaattcatggtgacgattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgctaagtgatcgttg 18852000  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagc 195  Q
    ||| ||||||| ||||||||||||| |||||||||  |||| |||||||||||| || | | ||||||||| || ||||||||| |||||||||| ||||    
T  18852001 ttattattttaccgttaagtgagtataaacatttttgaattagtgaatgagtgatttaagctcactaaggctataagggttaagtccatttgagaggagc 18852100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 25094559 - 25094369
Alignment:
Q  37 gaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacattttata 135  Q
    |||||||||||||| | ||||||||||||||||||| |||||||| || | |||| || |||||| |||||||| |||||||||||| ||| |||||  |    
T  25094559 gaaccattattttatttagttactagtgtggtaattcgttgtgagccggtaagtggtctttgttattattttaccgttaagtgagtagaaatatttttga 25094460  T
Q  136 att-gtgaatgagtgaattgatcccactaaggcatta--gggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
    ||| |||||||||||| || | | |||||||||| ||  |||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  25094459 attagtgaatgagtgagttaagctcactaaggcaataaagggttaagcccatttgagagaagcttatataagttctagtctttagagaaaa 25094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 49996826 - 49996996
Alignment:
Q  35 gagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacatttt 132  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||  | | ||||| | ||||||||||||||| |||||||| ||| |||||||||    
T  49996826 gagaaccattatttttactaagttactagtgtggtaaatagttgtgagctggtaagtgacctttgttagtattttaccgttaagtgtgtagaaacatttt 49996925  T
Q  133 ataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | |||||||| || |||  || | |||||||||||||||||||||||||||||||| || ||| |||||||    
T  49996926 agaattgtgattgggtgggttaagcccactaaggcattagggttaagcccatttgaaaatagcctatataa 49996996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 8537443 - 8537635
Alignment:
Q  13 ggattatttttagtgttttagcgagaaccattatttt---actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta 109  Q
    ||||||||||||||||||||| |||||||||||||||   ||||||||||| ||||| ||| |||||||||  || | ||||| ||||||||||||||||    
T  8537443 ggattatttttagtgttttagtgagaaccattatttttttactaagttactggtgtgataaatagttgtgaaccggtaagtgaccgttgttagtatttta 8537542  T
Q  110 c-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | ||||||||  || |||||||||| |||||||| |  |||  || | |||||||||||||||||||| |||||||||||||| ||| |||||||    
T  8537543 ccgttaagtg--tagaaacattttagaattgtgatttggtgggttaagcccactaaggcattagggttgagcccatttgagaatagcatatataa 8537635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 8602682 - 8602874
Alignment:
Q  13 ggattatttttagtgttttagcgagaaccattatttt---actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta 109  Q
    ||||||||||||||||||||| |||||||||||||||   ||||||||||| ||||| ||| |||||||||  || | ||||| ||||||||||||||||    
T  8602682 ggattatttttagtgttttagtgagaaccattatttttttactaagttactggtgtgataaatagttgtgaaccggtaagtgaccgttgttagtatttta 8602781  T
Q  110 c-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | ||||||||  || |||||||||| |||||||| |  |||  || | |||||||||||||||||||| |||||||||||||| ||| |||||||    
T  8602782 ccgttaagtg--tagaaacattttagaattgtgatttggtgggttaagcccactaaggcattagggttgagcccatttgagaatagcatatataa 8602874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 52401357 - 52401178
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    |||||||||||||| ||||||| | | ||||||||||||||| ||||||||||||  ||||||| ||||||||||||| | ||||| |||||||||||||    
T  52401357 gtgaggattatttt-agtgtttcaagtgagaaccattatttttactaagttactatagtggtaaatagttgtgagtcggtaagtgaccgttgttagtatt 52401259  T
Q  107 tta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttga 188  Q
    ||| |||||| |  |||||||||||||| ||||||||  |||||  || |  |||||||||||||| ||||||||||||||||    
T  52401258 ttaccgttaaat--gtaaaaacattttagaattgtgatcgagtgggttaagtccactaaggcattatggttaagcccatttga 52401178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 22142856 - 22142965
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||  |  | ||||| |||||||||||||||    
T  22142856 gtgaggattatttttagtgttt-agtgagaaccattattttactaagttactagtgtggtaattagtagtgaaccattaagtgaccgttgttagtatttt 22142954  T
Q  109 acgttaagtga 119  Q
     ||||||||||    
T  22142955 ccgttaagtga 22142965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 20839092 - 20838968
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||| ||| ||||||||||| | | |||||||||||||||||||||||| |||||| ||||||||| ||||| || | | |||||||| ||| |||||    
T  20839092 gtgagggttacttttagtgtttcaagtgagaaccattattttactaagttattagtgtagtaattagtcgtgagccggtaaatgatcgttattattattt 20838993  T
Q  108 ta-cgttaagtgagtaaaaacattt 131  Q
    || ||||||||||||| ||||||||    
T  20838992 taccgttaagtgagtagaaacattt 20838968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 17609658 - 17609524
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    |||||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||  |    || | ||||| |||||||||||||    
T  17609658 tgtgagaattatttttagtgttt-agtgagaaccattatttttactaagttactagtgtggtaattagtattttaccgttaagtgaccgttgttagtatt 17609560  T
Q  107 tta-cgttaagtgagtaaaaacattttataattgtg 141  Q
    ||| ||||||| | ||| |||||||||| |||||||    
T  17609559 ttaccgttaagagtgtagaaacattttagaattgtg 17609524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 19603862 - 19603799
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  19603862 tgaggattatttttagtgttttagtgagaaacattattttactaagttactagtgtagtaatta 19603799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 16646667 - 16646601
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||    
T  16646667 gtgagaattatttttagtgttttagtgagaaccattattttactaagttactagggtagtaattagt 16646601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 7322928 - 7323001
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgag 81  Q
    |||||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7322928 gtgaggattattgttagtgtttcaagtgagaaccattattttactaagttactagtgtggaaattagttgtgag 7323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 17023721 - 17023557
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtg 118  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||  |    || | ||||| |||||||||||||||| ||||||| |    
T  17023721 ttttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattttaccgttaagag 17023623  T
Q  119 agtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
     ||| |||||||||| ||||| |   |||||  || |  ||||||||| ||||||||||||||||||    
T  17023622 tgtagaaacattttagaattgagttggagtgggttaagtccactaagg-attagggttaagcccatt 17023557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 20194605 - 20194517
Alignment:
Q  157 cccactaaggcatta-gggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
    |||| |||||||||| |||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||   ||||||||||||||    
T  20194605 cccattaaggcattaagggttaagcctatttgagaggagcctatataagttctagactttagagaaaaatagcttttcatttcatttca 20194517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 41219361 - 41219420
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  41219361 attatttttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagt 41219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 51627186 - 51627251
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||| || |||||||||    
T  51627186 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagagtagtaattagt 51627251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 20177905 - 20177840
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||| |||| || || |||||||||||||||||||||||||||| |||||||||    
T  20177905 gtgagaattatttttagagttt-agtgaaaaccattattttactaagttactagtgtagtaattagt 20177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 27675506 - 27675460
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  27675506 tttagtgagaaccattattttactaagttactagtgtagtaattagt 27675460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 37233348 - 37233413
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||| ||| || ||| |||||||||||||||||||||||||||||| ||||||    
T  37233348 gtgagaattatttttagtattt-agtgaggaccattattttactaagttactagtgtggttattagt 37233413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 17005341 - 17005294
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  17005341 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 17005294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 18059315 - 18059362
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  18059315 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 18059362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 20255020 - 20254973
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  20255020 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 20254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 22228508 - 22228461
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  22228508 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 22228461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 7640494 - 7640540
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  7640494 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 7640540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 16657383 - 16657330
Alignment:
Q  19 tttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||| || ||||||| |||||||||||||||||||| || |||||||    
T  16657383 tttttagtgttt-agtgagaaccgttattttactaagttactagagtagtaatta 16657330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 22036133 - 22036087
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  22036133 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 22036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 46524075 - 46524029
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  46524075 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 46524029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 19962060 - 19962101
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  19962060 gagaacccttattttactaagttactagtgtagtgattagtt 19962101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 20954933 - 20954985
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactag 62  Q
    ||||| ||||||||||| |||| || || |||||||||||||||||||||||||    
T  20954933 gtgagaattatttttagcgttt-agtgataaccattattttactaagttactag 20954985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 21654634 - 21654671
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtg 66  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  21654634 tttagtgagaacccttattttactaagttactagtgtg 21654671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 13583386 - 13583430
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  13583386 ttagtgagaacctttattttactaagttactagtgtagtgattag 13583430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 54399122 - 54398896
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||| |||||||||| || | |||||||||||    
T  54399122 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttaccagtgtggtaaatagttgtgagccggtaagtgatcgttg 54399023  T
Q  99 ttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| |||||||| |||||||||||| |||||||||| |||| |||||||||||  || | |||||||||||||||||||||||||||||||||||||||     
T  54399022 ttattattttaccgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccactaaggcattagggttaagcccatttgagaagagcc 54398923  T
Q  197 tatataagttctagactttagagaaaa 223  Q
    ||||||||||||| |||||||||||||    
T  54398922 tatataagttctaaactttagagaaaa 54398896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 18235716 - 18235954
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||| | |||    
T  18235716 gtgaggattatatttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagctggtaagtgatcgttgttattgttt 18235815  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| |||| | ||||| |||||||||| |||| |||||||||||| || | ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  18235816 taccgttaggagagtagaaacattttagaatttgtgaatgagtgagttaagcccactaaggcattagggttaagcccatttgagaagagcctgtataagt 18235915  T
Q  206 tctagactttagag-aaaataggacttcatttcatttca 243  Q
    |||||||||||||| ||||||||  ||||||||||||||    
T  18235916 tctagactttagagaaaaataggttttcatttcatttca 18235954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 10375260 - 10375023
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||||||||||||| | | ||||||||||||||||| |||| |||||||||||||||||||||||| || | ||||| |||||||| ||||     
T  10375260 gtgagaattatttttagtgtttcaagtgagaaccattattttaccaagtaactagtgtggtaattagttgtgagccggtaagtgaccgttgttattattc 10375161  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| |||||||||||| |||||||||| |||| |||||| ||||| || | ||||| ||||||||||||||||||||||||||||||||| |||||||      
T  10375160 taccgttaagtgagtagaaacattttagaattagtgaataagtgagttaagcccacaaaggcattagggttaagcccatttgagaagagcctatataaac 10375061  T
Q  206 tctagactttagagaaaataggacttcatttcatttca 243  Q
    ||| | |||||||||||||||| |||||||||||||||    
T  10375060 tcttgtctttagagaaaataggtcttcatttcatttca 10375023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 10236780 - 10237001
Alignment:
Q  4 ttcatgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttag 102  Q
    ||||||| ||||||||||||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||||     
T  10236780 ttcatgtaaggattatttttagtgtttcaagtgagaaccattattt-actaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttat 10236878  T
Q  103 tattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttata 200  Q
    |||||||| |||||| ||||| |||||||||| |||| |||||| ||||  || | |||||||||||||||||||||| |||| ||||||||||| ||||    
T  10236879 tattttaccgttaagggagtagaaacattttagaattagtgaattagtgggttaagcccactaaggcattagggttaaacccaattgagaagagcctata 10236978  T
Q  201 taagttctagactttagagaaaa 223  Q
    ||||||||||| |||||||||||    
T  10236979 taagttctagattttagagaaaa 10237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 54362807 - 54363025
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||    
T  54362807 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttattattt 54362906  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataag 204  Q
    || ||||||||||||| |||||||||  |||| |||||||||||| || | | || ||||||||| |||||||||| ||||||||| |||| ||||||||    
T  54362907 taccgttaagtgagtagaaacatttttgaattagtgaatgagtgagttaagctcattaaggcattaagggttaagctcatttgagaggagcctatataag 54363006  T
Q  205 ttctagactttagagaaaa 223  Q
    |||||| ||||||||||||    
T  54363007 ttctagtctttagagaaaa 54363025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 41255888 - 41256084
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| ||||||||||||||    
T  41255888 tgtgagaattatttttagtgttttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtattt 41255987  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||| ||| |||||||||| |||||||| ||||||  || | ||||||||||||||||||||||||||| ||||||  ||| |||||||    
T  41255988 taccgttaagtgtgtagaaacattttagaattgtgattgagtgggttaagcccactaaggcattagggttaagcccaattgagagtagcctatataa 41256084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 15012805 - 15012999
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||  || | ||||| |||||||| |||||     
T  15012805 gtgagaattatttttagtgttttagtgagacccattattttactaagttactagtgtggtaaatagttgtgaaccggtaagtgaccgttgttactattta 15012904  T
Q  109 acgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
     ||||||||| |||||||||||||| |||||||| ||||||  || | |||||||||||||||||||||| |||||||||||| ||| |||||||    
T  15012905 ccgttaagtgtgtaaaaacattttagaattgtgattgagtgggttaagcccactaaggcattagggttaaacccatttgagaatagcctatataa 15012999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 28428480 - 28428242
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||| ||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||| |  | |||||| |||||   |||||    
T  28428480 gtgatgattattttcagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgcgagccagtaagtgattgttgtatttattt 28428381  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| |||||||||||| |||||||||| |||| |||||||||||  || | | ||||||||||||||||||||||||||||||| | ||  |||||||||    
T  28428380 taccgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcacactaaggcattagggttaagcccatttgagtatagtctatataagt 28428281  T
Q  206 tctagactttagagaaaataggacttcatttcatttcac 244  Q
    |||| |||||||||||||||||  |||||||||||||||    
T  28428280 tctatactttagagaaaataggttttcatttcatttcac 28428242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13589579 - 13589810
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||| || | |||||||||||    
T  13589579 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtgctaattagttgtgagccggtaagtgatcgttg 13589678  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatta-gggttaagcccatttgagaagagc 195  Q
    ||| ||||||| |||||| |||||| |||||||||  |||| |||||||||||| || | ||| ||||||||||| ||||||||||||||||||| ||||    
T  13589679 ttattattttaccgttaaatgagtagaaacatttttgaattagtgaatgagtgagttaagcccgctaaggcattaggggttaagcccatttgagaggagc 13589778  T
Q  196 ttatataagttctagactttagag-aaaatagg 227  Q
     ||||||| | ||||||||||||| ||||||||    
T  13589779 ctatataa-tcctagactttagagtaaaatagg 13589810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 12133153 - 12133344
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||||||| ||||||| ||||||||||||| |||||||||     
T  12133153 gagaaccattattttactaagttactagtgtggtaattagttttgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaacattttt 12133252  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
     |||| |||||||||||| || |  |||||||||| || |||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  12133253 gaattagtgaatgagtgagttaagtccactaaggcaataagggttaagcccatttgagaggagcctatataagttctagtctttagagaaaa 12133344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 38765435 - 38765252
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| |||||||||||||||    
T  38765435 gtgagaattatttttagtgttttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtatttt 38765336  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaa 191  Q
    | ||||||||| ||| |||||||||| |||||||| ||||||  || | ||||||| | |||||||||| ||||||||||||||    
T  38765335 accgttaagtgtgtagaaacattttagaattgtgattgagtgggttaagcccactacgacattagggttgagcccatttgagaa 38765252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 47467858 - 47468104
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||||  ||| || | |||||| ||||    
T  47467858 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaaattactagtgtggtaattagttaggagccggtaagtgattgttg 47467957  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataa-ttgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| ||||||| ||||||||||||| |||||||||| || |||||||||||||  || | |||||  || |||||||||||||  |||| |||| ||||     
T  47467958 ttattattttaccgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccacagagacattagggttaagatcattggagaggagcc 47468057  T
Q  197 tatataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    |||||||   || | ||||||||||||||||  ||||||||||||||    
T  47468058 tatataaacccttgtctttagagaaaataggttttcatttcatttca 47468104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 50219453 - 50219698
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||| ||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||    
T  50219453 aaattcatggtgatgattatttttagtatttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagctgataagtgatcgctg 50219552  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| ||||||| ||||||| ||||| ||| |||||| ||||  ||| |||||||  | | |||||||||||||||| |||||||| |||||||||||||     
T  50219553 ttattattttatcgttaagagagtagaaatattttagaattaatgattgagtgagctaagcccactaaggcattagagttaagcctatttgagaagagcc 50219652  T
Q  197 tatataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    ||| |||  | | | ||||||||||||||||  ||||||||||||||    
T  50219653 tatgtaaact-ttgtctttagagaaaataggttttcatttcatttca 50219698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 19560090 - 19559853
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||| || | | ||||||||||   | |||    
T  19560090 gtgaggattatttttagtgtttcaagtgagaaccattattttacaaagttactagtgtggtaattagttgtgagccggtaaatgatcgttgtattttttt 19559991  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || ||||||||||||| |||||||||| |||| |||| ||  |||  | |  |||||||||| |||||||||||||||||||||| |||| |||||||      
T  19559990 taccgttaagtgagtagaaacattttagaattagtgattggatgagctaagtccactaaggcgttagggttaagcccatttgagaggagcctatataaac 19559891  T
Q  206 tctagactttagagaaaataggacttcatttcatttca 243  Q
     || | ||||||||||||||||  ||||||||||||||    
T  19559890 ccttgtctttagagaaaataggttttcatttcatttca 19559853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 41916253 - 41916498
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| |||||||||||||||| || | |||||||||||    
T  41916253 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaaattactagtgcggtaattagttgtgagccggtaagtgatcgttg 41916352  T
Q  99 ttagtattttacgttaagtgagtaaaaacattttataa-ttgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctt 197  Q
    ||| |||||||||||||| | ||| |||||||||| || |||||||| | ||  || | ||||||||| ||||| |||||||| ||||||| | || | |    
T  41916353 ttattattttacgttaagagggtagaaacattttagaatttgtgaatcaatgggttaagcccactaagacattaaggttaagcacatttgataggaccct 41916452  T
Q  198 atataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    ||||||  |||   |||||||||||||| |  ||||||||||||||    
T  41916453 atataaactcttctctttagagaaaataagttttcatttcatttca 41916498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 40904442 - 40904647
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | || ||||||||||||||||||||| || ||| ||||||||||||||| ||||   ||| | |||    
T  40904442 aaattcatggtgaggattatttttagtgtttcaagtgaaaaccattattttactaagttattaatgtagtaattagttgtgagccgatatatgaccattg 40904541  T
Q  99 ttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctt 197  Q
    ||| |||||||| |||| ||||||| |||||||||| |||||||| ||||||| || |  ||||||||||||||||||||||| |||||||||| ||| |    
T  40904542 ttattattttaccgttaggtgagtagaaacattttagaattgtgattgagtgagttaagtccactaaggcattagggttaagctcatttgagaatagcct 40904641  T
Q  198 atataa 203  Q
    ||||||    
T  40904642 atataa 40904647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 7964231 - 7964408
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||||  || | |||||||||||||||||||||    
T  7964231 gtgaggattatttttagtgttttagcaagaaccattattttactaagttaccagtgagataattagttgtgaaccgttaagtgatcgttgttagtatttt 7964330  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    | | ||||| | ||| |||||||||| |||| ||  ||||||  || |  |||||||||||||||||||| |||||||    
T  7964331 accattaagagtgtagaaacattttagaattttgtttgagtgggttaagtccactaaggcattagggttaggcccatt 7964408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 13442301 - 13442432
Alignment:
Q  114 aagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagac 212  Q
    ||||| ||| |||||||||| |||| |||||||||||  || |  |||||||| ||||||| ||||||| ||||||| ||||| ||||||||||||||||    
T  13442301 aagtgcgtagaaacattttagaatttgtgaatgagtgggttaagtccactaagacattaggattaagcctatttgagtagagcctatataagttctagac 13442400  T
Q  213 tttagagaaaataggacttcatttcatttcac 244  Q
    ||||||||||||||| ||||||||||||||||    
T  13442401 tttagagaaaataggtcttcatttcatttcac 13442432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13441850 - 13441935
Alignment:
Q  1 aaattcatgtgaggattatttttagtgtttta-gcgagaaccattattttactaa-gttactagtgtggtaattagttgtgagtcg 84  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13441850 aaattcatgtgaggattatttttagtgtttcaagtgagaaccattattttactaaagttactagtgtggtaattagttgtgagtcg 13441935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 7185385 - 7185451
Alignment:
Q  14 gattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtga 80  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7185385 gattatttttattgttttagtgagaaccattattttactaagttactagtgtggtaattagttgtga 7185451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 49072419 - 49072294
Alignment:
Q  9 gtgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||| ||||  || || ||||||||||||||||||||| |||  |||||||||||||| || |  |||||| || ||| |||||    
T  49072419 gtgaggattatttttagtgtcttaggtgataatcattattttactaagttactaatgtaataattagttgtgagccggtaggtgatcattattattattt 49072320  T
Q  108 ta-cgttaagtgagtaaaaacatttt 132  Q
    || ||||||||||||| |||||||||    
T  49072319 taccgttaagtgagtagaaacatttt 49072294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 183
Target Start/End: Complemental strand, 24238330 - 24238180
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| || | ||||||||||  || |||| || ||||||||||||| ||| |||||     
T  24238330 gagaaccattattttactaagttattagtgtgataattagttgtgagccggtaagtgatcgttactattattataccgttaagtgagtagaaatatttt- 24238232  T
Q  134 taattg-tgaatgagtgaattgatcccactaaggcatt-agggttaagccca 183  Q
     ||||| | ||||||||| |||| || | |||| |||| |||||||||||||    
T  24238231 gaattgattaatgagtgagttgaacctattaagacattaagggttaagccca 24238180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 32460252 - 32460314
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||    
T  32460252 gtgagaattatttttagt--tttagtgagaaccattattttactaagttactagtgtagtaatta 32460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 40885057 - 40885122
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||| ||||||||||||||||||| |||||| |||||||| |||||||||||| || |||||||||    
T  40885057 tgagaattatttttagtgttttagtgagaacaattattttgctaagttactagagtagtaattagt 40885122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 14499738 - 14499795
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||| |||||||    
T  14499738 attatttttagtggtt-agtgagaaccattattttactaagttactagtgtagtaatta 14499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 14996833 - 14996786
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  14996833 tttagtgagaacccttattttactaagttactagtgtggtgattagtt 14996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 19021201 - 19021135
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  19021201 gtgagaattatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 19021135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 12244376 - 12244440
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||||||| || |||||||||||||||| |||||||||    
T  12244376 gtgagaattatttttagtgttt-agtgagaaccattactt-actaagttactagtgtagtaattagt 12244440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 18493630 - 18493695
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||||||||||||||| ||| || ||| ||| |||||||||||||||||||| || |||||||||    
T  18493630 gtgaggattatttttagtattt-agtgaggaccgttattttactaagttactagagtagtaattagt 18493695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 37956532 - 37956597
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||||||||||| |||||||||||| ||  ||||||||    
T  37956532 gtgagaattatttttagtgttt-agtgagaaccattattttgctaagttactagggtaataattagt 37956597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 15213106 - 15213171
Alignment:
Q  9 gtgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||||||| ||||| ||  ||||||||||| ||||||||||||| ||||| |||||||    
T  15213106 gtgaggattatttttaatgtttcaggtgagaaccattagtttactaagttaccagtgtagtaatta 15213171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 19821279 - 19821339
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtga 80  Q
    ||||||| |||| | | ||||||||||||| ||||||||||||| | ||||||||||||||    
T  19821279 ttttagtattttggtgggaaccattattttgctaagttactagtatagtaattagttgtga 19821339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 7131622 - 7131669
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  7131622 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 7131669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 37477856 - 37477809
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  37477856 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 37477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 41063547 - 41063594
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  41063547 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 41063594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 47534582 - 47534636
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||| || ||||||    
T  47534582 ttttagtgttt-agtgagaaccattattttgctaagttactagtgtagtcattagt 47534636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 8378863 - 8378817
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  8378863 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 8378817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 9652646 - 9652588
Alignment:
Q  8 tgtgaggattatttttagtgttt-tagcgagaaccatta-ttttactaagttactagtg 64  Q
    |||||||||||||||||||||||  || | ||||||||| |||||||||||||||||||    
T  9652646 tgtgaggattatttttagtgtttcaagtgggaaccattatttttactaagttactagtg 9652588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 10644909 - 10644863
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  10644909 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 10644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 15286804 - 15286850
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15286804 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 15286850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 15293913 - 15293959
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15293913 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 15293959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 18169667 - 18169621
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  18169667 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 18169621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 18248891 - 18248850
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  18248891 gagaacccttattttactaagttactagtgtagtgattagtt 18248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 22351628 - 22351669
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  22351628 gagaacccttattttactaagttactagtgtagtgattagtt 22351669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 16523529 - 16523489
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  16523529 agaacccttattttactaagttactagtgtagtgattagtt 16523489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 19696929 - 19696969
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  19696929 agaacccttattttactaagttactagtgtagtgattagtt 19696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 19707514 - 19707554
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  19707514 agaacccttattttactaagttactagtgtagtgattagtt 19707554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 20001410 - 20001366
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  20001410 ttagtgagaacctttattttactaagttactagtgtagtgattag 20001366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 54047416 - 54047448
Alignment:
Q  30 ttagcgagaaccattattttactaagttactag 62  Q
    |||| ||||||||||||||||||||||||||||    
T  54047416 ttagtgagaaccattattttactaagttactag 54047448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 13448343 - 13448582
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||   |||||    
T  13448343 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattaattgtgagtcggtaagtgatcgttgtgtttattt 13448442  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| |||||||||||| |||||||||| |||| |||||||| ||  || | |||||||||| |||||||||||| ||||||||| ||||| |||||||||    
T  13448443 taccgttaagtgagtagaaacattttagaatttgtgaatgaatgggttaagcccactaaggaattagggttaagaccatttgagtagagcctatataagt 13448542  T
Q  206 tctagactttagagaaaataggacttca-tttcatttcac 244  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  13448543 tctagactttagagaaaataggtcttcattttcatttcac 13448582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 33560383 - 33560140
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  33560383 aaattcatgtgaggattatttttagtgttttagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatggttgtt 33560284  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
    ||||||||| | ||| ||||||| |||||||||| ||||| |||||||||| || | ||||||||| |||||| |||||| |||||  ||| |||| |||    
T  33560283 agtattttaccattaggtgagtagaaacattttagaattgggaatgagtgagttaagcccactaagacattagagttaagtccattgcagaggagcctat 33560184  T
Q  200 ataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    |||   ||| | |||  ||||||||||| |||| ||||||||||    
T  33560183 atacactcttgtcttaggagaaaataggtcttcttttcatttca 33560140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 39285684 - 39285932
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||||||| ||| |||| || | |||||||| ||    
T  39285684 aaattcatggtgaggattaattttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaatttgttatgagccggtaagtgatcgctg 39285783  T
Q  99 ttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatta-gggttaagcccatttgagaagagc 195  Q
    ||| |||||||| ||||||| |||| |||||||||  |||| |||||||||||| || | ||||||||||||||| ||||||||||||||||||| ||||    
T  39285784 ttattattttactgttaagttagtagaaacatttttgaattagtgaatgagtgagttaagcccactaaggcattaggggttaagcccatttgagaggagc 39285883  T
Q  196 ttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
     ||||||||||||| ||||||||| ||||||||  ||||||||||||||    
T  39285884 ctatataagttctaaactttagagaaaaataggttttcatttcatttca 39285932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 45150325 - 45150098
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||  | | |||||||||||    
T  45150325 aaattcatggtgaggattatttttagtgttttagatgagaaccattattttactaagttactagtttgttaattagttgtgagctggtaagtgatcgttg 45150226  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatta-gggttaagcccatttgagaagagc 195  Q
    ||| ||||||| ||||||||||||| |||||||||  |||| |||||||||||| || | || |||||||||||| ||||||||| ||||||||| || |    
T  45150225 ttattattttaccgttaagtgagtagaaacatttttgaattagtgaatgagtgagttaagcctactaaggcattaggggttaagctcatttgagaggaac 45150126  T
Q  196 ttatataagttctagactttagagaaaa 223  Q
     |||||||||||| ||||||||||||||    
T  45150125 ctatataagttctggactttagagaaaa 45150098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 9723312 - 9723543
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||| || | |||||||||||    
T  9723312 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtgctaattagttgtgagccggtaagtgatcgttg 9723411  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatta-gggttaagcccatttgagaagagc 195  Q
    ||| ||||||| |||||| |||||| |||||||||  |||| |||||||||||| || | ||| ||||||||||| ||||||||||||||||||| ||||    
T  9723412 ttattattttaccgttaaatgagtagaaacatttttgaattagtgaatgagtgagttaagcccgctaaggcattaggggttaagcccatttgagaggagc 9723511  T
Q  196 ttatataagttctagactttagag-aaaatagg 227  Q
     ||||||| | ||||||||||||| ||||||||    
T  9723512 ctatataa-tcctagactttagagtaaaatagg 9723543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 243
Target Start/End: Complemental strand, 4439519 - 4439276
Alignment:
Q  3 attcatgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtta 101  Q
    |||||| ||||||||||||||||| ||| | | |||||| |||||||||||||||||||||||||||| ||||||||||| |  | ||||| ||||||||    
T  4439519 attcatatgaggattatttttagtatttcaagtgagaactattattttactaagttactagtgtggtagttagttgtgagcctgtaagtgaccgttgtta 4439420  T
Q  102 gtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttata 200  Q
    |||||||| | ||||| |||||  ||||||||| |||||||||| ||||  ||   ||| ||||||||||||||||||||||||||||||| ||| ||||    
T  4439419 gtattttacccttaagggagtagtaacattttagaattgtgaataagtgggttacgcccgctaaggcattagggttaagcccatttgagaatagcctata 4439320  T
Q  201 taagttctagactttaga-gaaaataggacttcatttcatttca 243  Q
    ||||||||| || ||||| |||||||||  | ||||||||||||    
T  4439319 taagttctaaaccttagaggaaaataggtttacatttcatttca 4439276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 4446950 - 4446707
Alignment:
Q  1 aaattcatgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgt 99  Q
    |||||||| |||| |||||||||||||||| | | |||||| ||||||||||||| |||||||||||||| ||||||||||| || | | ||| ||||||    
T  4446950 aaattcatatgagaattatttttagtgtttcaagtgagaactattattttactaaattactagtgtggtagttagttgtgagccggtaaatgaccgttgt 4446851  T
Q  100 tagtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctta 198  Q
    |||||||||| ||||||| |||||  ||||||||| |||||  ||||||||  ||   ||||||||||||||||||||||||||||||||||| ||| ||    
T  4446850 tagtattttaacgttaagggagtagtaacattttagaattgcaaatgagtgggttacgcccactaaggcattagggttaagcccatttgagaatagccta 4446751  T
Q  199 tataagttctagactttaga-gaaaataggacttcatttcattt 241  Q
    ||||||||||| || ||||| |||||||||  | ||||||||||    
T  4446750 tataagttctaaaccttagaggaaaataggtttacatttcattt 4446707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 4485440 - 4485250
Alignment:
Q  13 ggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cg 111  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||| |  | ||||| |||||||||||||||| ||    
T  4485440 ggattatttttagtattt-agtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccagtaagtgaccgttgttagtattttaccg 4485342  T
Q  112 ttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    ||||| | ||| |||||||||| |||||||| ||||||  || | |||||||||||| |||||||||||||||||||||| ||| |||||||    
T  4485341 ttaagcgtgtagaaacattttaaaattgtgattgagtgggttaagcccactaaggcaatagggttaagcccatttgagaatagcctatataa 4485250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 10332018 - 10332185
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |||||||||| || | ||||| ||||||||||||||    
T  10332018 tgtgaggattatttttagtattttagtgagaactattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtattt 10332117  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattaggg 174  Q
    || ||||||||| ||| |||||||||| |||||||| || |||  || | ||||||||||||||||||    
T  10332118 taccgttaagtgtgtagaaacattttagaattgtgattgggtgggttaagcccactaaggcattaggg 10332185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 203
Target Start/End: Complemental strand, 31501874 - 31501704
Alignment:
Q  35 gagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacatttt 132  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||||| || | ||||| ||||||||||||||||| |||||||| ||| |||||||||    
T  31501874 gagaaccattatttttactaagttactagtgtggtagatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgtagaaacatttt 31501775  T
Q  133 ataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | |||||||| ||||||  || | ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  31501774 agaattgtgattgagtgggttaagcccactaaggcattagggttaagcccatttgagaatagcctatataa 31501704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 244
Target Start/End: Complemental strand, 28390947 - 28390792
Alignment:
Q  89 gtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccattt 186  Q
    |||||||||||   |||||||| ||||||||  ||||||||||||| |||| |||||||||||  || | ||||||||||||||| ||||||||||||||    
T  28390947 gtgatcgttgtatttattttaccgttaagtg--taaaaacattttagaatttgtgaatgagtgggttaagcccactaaggcattacggttaagcccattt 28390850  T
Q  187 gagaagagcttatataagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    ||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28390849 gagtagagcctatataagttctagactttagagaaaataggtcttcatttcatttcac 28390792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18079005 - 18079230
Alignment:
Q  1 aaattcatgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgt 99  Q
    ||||| |||||| ||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||| ||||||||||| || | ||||||||| ||    
T  18079005 aaattaatgtgaagattatttttagtgtttcaagtgagattcattattttactaagttactagtgtggtagttagttgtgagccggtaagtgatcgtggt 18079104  T
Q  100 tagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagct 196  Q
    || ||||| | |||||||||| || ||||||||| ||||| |||||||| ||| || | |||| |||| |||| | |||| |||||| |||||| ||||     
T  18079105 tattatttcaccgttaagtgaatagaaacattttttaattagtgaatgaatgagttaagcccattaagacattaatggttgagccca-ttgagaggagcc 18079203  T
Q  197 tatataagttctagactttagagaaaa 223  Q
    |||||||||||||| ||||||||||||    
T  18079204 tatataagttctagtctttagagaaaa 18079230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 14942730 - 14942535
Alignment:
Q  10 tgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||||||| ||||||| | | ||||||||| ||||| |||||||||||||||||||||||||||||||| || | ||||| | ||||||||||||    
T  14942730 tgaggattatttt-agtgtttcaagtgagaaccatcatttttactaagttactagtgtggtaattagttgtgagccggtaagtgaccattgttagtattt 14942632  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||| ||| |||| ||||| |||||||| || |||  || |  |||||||||||||| ||||||||||||||||||| ||| |||||||    
T  14942631 taccgttaagtgtgtagaaactttttagaattgtgattgggtgggttaagtccactaaggcattaaggttaagcccatttgagaatagcctatataa 14942535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 15370323 - 15370128
Alignment:
Q  10 tgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||||||||||| ||||||| | | ||||||||| ||||| |||||||||||||||||||||||||||||||| || | ||||| | ||||||||||||    
T  15370323 tgaggattatttt-agtgtttcaagtgagaaccatcatttttactaagttactagtgtggtaattagttgtgagccggtaagtgaccattgttagtattt 15370225  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || ||||||||| ||| |||| ||||| |||||||| || |||  || |  |||||||||||||| ||||||||||||||||||| ||| |||||||    
T  15370224 taccgttaagtgtgtagaaactttttagaattgtgattgggtgggttaagtccactaaggcattaaggttaagcccatttgagaatagcctatataa 15370128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 28722837 - 28722600
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||  ||| ||||||||  || ||| ||||||||||| ||||||||||||| ||||||| ||||||| |  || | ||||| ||||||||||||||    
T  28722837 gtgaggaacattcttagtgttcaagtgaggaccattatttttactaagttactagagtggtaaatagttgtaaaccggtaagtgaccgttgttagtattt 28722738  T
Q  108 tac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagtt 206  Q
    ||| ||||| || ||| |||| ||||| |||||||| |||||| ||| | ||||||||||||||| |||||||| |||||||| ||||| | ||||||||    
T  28722737 taccgttaaatgtgtagaaac-ttttagaattgtgattgagtggattaagcccactaaggcattaaggttaagctcatttgagtagagcctgtataagtt 28722639  T
Q  207 ctagactttagag-aaaataggacttcatttcatttcac 244  Q
     ||||||| |||| ||||||||  | |||||||||||||    
T  28722638 ttagacttgagagaaaaataggtttacatttcatttcac 28722600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 34240718 - 34240902
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagt-------cgatgagtgatcgttgtta 101  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||| | |||       || | |||| |||||||||    
T  34240718 gtgaggattatttttagtgttttagtgagaactattattttactaagttactagtgtagtaatgagttattagtattttaccgttaagtggtcgttgtta 34240817  T
Q  102 gtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||||| ||||||| | ||| |||||||||| |||||||  ||||||  || |  ||||||||||||||||||||||||||||    
T  34240818 gtattttaccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaaatccactaaggcattagggttaagcccatt 34240902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9251175 - 9250939
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||| ||||||||||||||||| |   ||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||        
T  9251175 aaattcatggtgatgattatttttagtgtttcaattgagaatcattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatc---a 9251079  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| ||||||| ||||||| ||||| |||||||||| | ||  ||| |||||||  | | |||||||||||||||||||||||| ||||| ||||||||     
T  9251078 ttattattttaccgttaagagagtagaaacattttagatttaatgattgagtgagctaagcccactaaggcattagggttaagctcattttagaagagca 9250979  T
Q  197 tatataagttctagactttagagaaaataggacttcattt 236  Q
    | |||||  ||| | |||| |||||||||||  |||||||    
T  9250978 tgtataaactcttgtcttttgagaaaataggttttcattt 9250939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 9319074 - 9319310
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||| ||||||||||||||||| |   ||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||        
T  9319074 aaattcatggtgatgattatttttagtgtttcaattgagaatcattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatc---a 9319170  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| ||||||| ||||||| ||||| |||||||||| | ||  ||| |||||||  | | |||||||||||||||||||||||| ||||| ||||||||     
T  9319171 ttattattttaccgttaagagagtagaaacattttagatttaatgattgagtgagctaagcccactaaggcattagggttaagctcattttagaagagca 9319270  T
Q  197 tatataagttctagactttagagaaaataggacttcattt 236  Q
    | |||||  ||| | |||| |||||||||||  |||||||    
T  9319271 tgtataaactcttgtcttttgagaaaataggttttcattt 9319310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 8267401 - 8267482
Alignment:
Q  163 aaggcattagggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  8267401 aaggcattagggttaagcccatttgagaggagcctatataagttctagactttagagaaaaataggttttcatttcatttca 8267482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 14268391 - 14268502
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||  |    || | ||||||||||||| |||||||    
T  14268391 gtgaggattatttttagagttttagtgagaaccattattttactaagttactagtgtggttattagtattttaccgttaagtgatcgttgttggtatttt 14268490  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  14268491 accgttaagtga 14268502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 20583087 - 20583289
Alignment:
Q  22 ttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtga 119  Q
    ||||||||  || ||||||||||||||| |||||||| ||||  |||||| |||||| ||  || | ||||| || |||||||||||||| ||||||||     
T  20583087 ttagtgttcaagtgagaaccattatttttactaagttgctagaatggtaaatagttgggaaccggtaagtgaccgatgttagtattttaccgttaagtgt 20583186  T
Q  120 gtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagactttagag 219  Q
    ||| |||| ||||| | |||||| ||||||  || |  |||||||||||||||| |||| |||||||||| ||||| |||||||||| ||||||| | ||    
T  20583187 gtagaaac-ttttagacttgtgattgagtgggttaagtccactaaggcattaggattaaacccatttgagtagagcctatataagttttagacttgaaag 20583285  T
Q  220 aaaa 223  Q
    ||||    
T  20583286 aaaa 20583289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 46474594 - 46474515
Alignment:
Q  144 tgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||    
T  46474594 tgagtgaattaaacccactaaggcattagggttaagctcatttgagaagagcctatataagttttagactttggagaaaa 46474515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 28392429 - 28392357
Alignment:
Q  11 gaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagt 82  Q
    |||||||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  28392429 gaggattatttttagtgtttcaagtgagaaccattattttactaaattactagtgtggtaattagttgtgagt 28392357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 48357372 - 48357239
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||  |    || | ||||||||||||| ||||||    
T  48357372 gtgagaattatttttagtgttt-agcgagaaccattatttttactaagttactagtgtggttattagtattttaccgttaagtgatcgttgttggtattt 48357274  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtg 141  Q
    || ||||||| | ||| |||||||||| |||||||    
T  48357273 taccgttaagagtgtagaaacattttagaattgtg 48357239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 16914446 - 16914644
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||| ||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||  |    || | |||||  |||||||||||||    
T  16914446 gtgagaattaattttagtgttt-agtgagaaccattatttttactaagttactagtgtggttattagtattttaccgttaagtgactgttgttagtattt 16914544  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttga-gaagagcttatataagt 205  Q
    || ||||||| | ||| |||||||||| |||||||  ||||||  || |  ||||||||| |||||| ||||||||||| || ||| ||| |||||||||    
T  16914545 taccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaagtccactaaggaattaggattaagcccattagaggaatagcctatataagt 16914644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 21675295 - 21675370
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac 110  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||  | | |||||||||||||| ||||||||    
T  21675295 gagaaccattattttaccaagttactagtgtggtaattagttgtaagctggtaagtgatcgttgttattattttac 21675370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 8562890 - 8563030
Alignment:
Q  46 ttttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt--acgttaagtgagtaaaaacattttataattgtgaa 143  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||| || ||| ||||||   ||||||||||||| ||||||| |  | | || ||    
T  8562890 ttttactaagttactagtgtggtaattagttgtgagccggtaagtgatcattattattatttttaccgttaagtgagtagaaacattatgaattggttaa 8562989  T
Q  144 tgagtgaattgatcccactaaggcatt-agggttaagccca 183  Q
    ||||||  |||| |||| |||| |||| |||||||||||||    
T  8562990 tgagtgtgttgaacccattaagacattaagggttaagccca 8563030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 13352675 - 13352468
Alignment:
Q  17 tatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgtta 114  Q
    |||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| || | ||||| || | ||| ||||||| | |||    
T  13352675 tatttttagtgtttgaagtgagaaccatt-ttttactaagttactagtgtggtaattagttgtgagccggtaagtgaccgatattattattttaccatta 13352577  T
Q  115 agtgagtaaaaacattttataattg--tgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctaga 211  Q
    ||||||||  |||||||  | | ||  | | | | ||  || | |||| ||||| ||| |||||||| ||||||||||| |||| ||||||||||||||     
T  13352576 agtgagtagtaacatttcgtgaatggtttagtaaatgggttaagcccattaaggaattaagggttaatcccatttgagaggagcctatataagttctagt 13352477  T
Q  212 ctttagaga 220  Q
    |||||||||    
T  13352476 ctttagaga 13352468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 46474699 - 46474606
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtta 101  Q
    |||| |||||||||||| |||| | | |||||| |||||||||||||||||||||||| ||||||||||||||| || |  |||||||||||||    
T  46474699 gtgatgattatttttagcgtttcaagggagaactattattttactaagttactagtgtagtaattagttgtgagccggtacgtgatcgttgtta 46474606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 9612041 - 9611860
Alignment:
Q  11 gaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagt-------cgatgagtgatcgttgttagt 103  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||| |  |||||||||| |||       || | ||||| |||| |||||    
T  9612041 gaggattatttttagtgttt-agtgagaaccgttattttactaagttactagtgagacaattagttgttagtatcttaccgttaagtgaccgttattagt 9611943  T
Q  104 atttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||| ||||  ||||||| |||||||||| |||||||  |||||   || |  ||||||||| ||||||||| ||||||||    
T  9611942 attttaccgttgcgtgagtagaaacattttagaattgtgtttgagttggttaagtccactaaggaattagggttgagcccatt 9611860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 9839612 - 9839431
Alignment:
Q  11 gaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagt-------cgatgagtgatcgttgttagt 103  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||| |  |||||||||| |||       || | ||||| |||| |||||    
T  9839612 gaggattatttttagtgttt-agtgagaaccgttattttactaagttactagtgagacaattagttgttagtatcttaccgttaagtgaccgttattagt 9839514  T
Q  104 atttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||| ||||  ||||||| |||||||||| |||||||  |||||   || |  ||||||||| ||||||||| ||||||||    
T  9839513 attttaccgttgcgtgagtagaaacattttagaattgtgtttgagttggttaagtccactaaggaattagggttgagcccatt 9839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 14935909 - 14935836
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgag 81  Q
    |||||||||||||| ||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14935909 gtgaggattatttt-agtgtttcaagtgagaaccattatttttactaagttactagtgtggtaattagttgtgag 14935836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 15363502 - 15363429
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgag 81  Q
    |||||||||||||| ||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15363502 gtgaggattatttt-agtgtttcaagtgagaaccattatttttactaagttactagtgtggtaattagttgtgag 15363429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 16920291 - 16920226
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||| || |||||||||    
T  16920291 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagggtagtaattagt 16920226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 47480563 - 47480629
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||| || |||||||    
T  47480563 gtgagaattatttttaatgttt-agtgagaaccattattttactaagttactagtgtagtgattagtt 47480629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 13378258 - 13378193
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||||||| || |||||||||    
T  13378258 gtgagaattatttttagtgtttaat-gagaaccattattttactaagttactagggtagtaattagt 13378193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 44304564 - 44304602
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44304564 gagaaccattattttactaagttactagtgtggtaatta 44304602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 17223508 - 17223548
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17223508 gagaaccattattttactaagttactagtgtagtaattagt 17223548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 21537339 - 21537391
Alignment:
Q  42 attattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatc 94  Q
    ||||| |||||||||||||||||||||||||||||||||| || | |||||||    
T  21537339 attatcttactaagttactagtgtggtaattagttgtgagccggtaagtgatc 21537391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 3050316 - 3050270
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactag 62  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  3050316 attatttttagtgttt-agtgagaaccattattttactaagttactag 3050270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 17923182 - 17923143
Alignment:
Q  42 attattttactaagttactagtgtggtaattagttgtgag 81  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  17923182 attattttactaagttactagtgtggtaattagttttgag 17923143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 15950348 - 15950395
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15950348 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 15950395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 18253403 - 18253450
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  18253403 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 18253450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 10264344 - 10264298
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  10264344 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 10264298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 13390092 - 13390046
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||||||||||||||| || |||| ||||    
T  13390092 tttagtgagaaccattattttactaagttactagggtagtaagtagt 13390046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 15516415 - 15516461
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15516415 ttagggagaacccttattttactaagttactagtgtagtgattagtt 15516461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 15928267 - 15928221
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15928267 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 15928221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 16419195 - 16419149
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  16419195 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 16419149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 10990097 - 10990056
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  10990097 gagaacccttattttactaagttactagtgtagtgattagtt 10990056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 13275508 - 13275455
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccatta-ttttactaagttacta 61  Q
    ||||| ||||||||||||||||||| ||||||| ||| |||| |||||||||||    
T  13275508 gtgagaattatttttagtgttttagtgagaaccgttatttttgctaagttacta 13275455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 14250455 - 14250491
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  14250455 tttagtgagaacccttattttactaagttactagtgt 14250491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 26009706 - 26009746
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  26009706 agaacccttattttactaagttactagtgtagtgattagtt 26009746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 38424785 - 38424749
Alignment:
Q  167 cattagggttaagcccatttgagaagagcttatataa 203  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  38424785 cattagggttaagcccatttgagaatagcctatataa 38424749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 48756758 - 48756802
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  48756758 ttagtgagaacctttattttactaagttactagtgtagtgattag 48756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 87085 - 86849
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||| ||||| | | |||||||||||||| ||||||||| |||||||||||||||||||||| || | |||||||||||||| |||||    
T  87085 gtgaggattatttttaatgtttcaagtgagaaccattatttcactaagttaatagtgtggtaattagttgtgagccggtaagtgatcgttgttattattt 86986  T
Q  108 tac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagtt 206  Q
    ||| |||||||||||| |||||||||| ||||||| |||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||       
T  86985 taccgttaagtgagtataaacattttagaattgtggatgagtgagttaagcccactaaggcattagggttaagcccatttgagaagagcctatataaacc 86886  T
Q  207 ctagactttagagaaaataggacttcatttcatttca 243  Q
     | |  |||||||||||||||  ||||||||||||||    
T  86885 attgtttttagagaaaataggttttcatttcatttca 86849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 28235 - 27989
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||  || | |||||||||||    
T  28235 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgaaccggtaagtgatcgttg 28136  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||||||||||| ||||||||||||| |||||||||| ||||  ||| | ||||| || | ||||||||||| |||||||||||| ||||||||| ||||     
T  28135 ttagtattttaccgttaagtgagtagaaacattttagaattaatgattaagtgagttaagcccactaaggccttagggttaagcacatttgagaggagcc 28036  T
Q  197 tatataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    |||||||   || | ||| ||||||||||||  | ||||||||||||    
T  28035 tatataaacccttgtcttaagagaaaataggtttacatttcatttca 27989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 116570 - 116787
Alignment:
Q  9 gtgaggattatttttagtgttttagcga-gaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| |   | ||||||||||||||||||||||||||| ||||||||||||||||| || | |||||| ||||||| |||||    
T  116570 gtgaggattatttttagtgtttcaaataagaaccattattttactaagttactagtatggtaattagttgtgagccggtaagtgattgttgttattattt 116669  T
Q  108 tac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    ||| |||||||||||| |||||||||| |||| |||||||| ||| || | ||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  116670 taccgttaagtgagtagaaacattttagaattagtgaatgactgagttaaacccactaagacattagggttaagcccatttgagaggagcctatataagt 116769  T
Q  206 tctagactttagagaaaa 223  Q
    ||||||||||||||||||    
T  116770 tctagactttagagaaaa 116787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 15889231 - 15889468
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||||||||||||| || | |||||||||||||| |||||    
T  15889231 gtgaggattatttttagtgttttaagtgagaatcattattttacttagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttactattt 15889330  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || |||||||||| || |||||||||| |||| |||| ||||||| || | |||||||||||||||||||||||||||||||||| || | |||||||      
T  15889331 taccgttaagtgattagaaacattttagaattagtgattgagtgagttaagcccactaaggcattagggttaagcccatttgagaggatcctatataaac 15889430  T
Q  206 tctagactttagagaaaataggacttcatttcatttca 243  Q
    ||| | ||||||||||||| ||  ||||||||||||||    
T  15889431 tcttgtctttagagaaaatgggttttcatttcatttca 15889468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 19854851 - 19854616
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||     
T  19854851 aaattcatgcgtggattatttttagtgtttttgtgagaaccattattttactaagttactagtgtggtaattagttatgagccggtaagtgatcgttgta 19854752  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataa-ttgtg-aatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagctt 197  Q
      ||||||| ||||||||||||| |||||||||| || ||||| ||| |||    | | ||||||||||||||||||||||||||||||||| ||||| |    
T  19854751 tttattttaccgttaagtgagtataaacattttagaatttgtgaaataagtaggctaagcccactaaggcattagggttaagcccatttgagtagagcct 19854652  T
Q  198 atataagttctagactttagagaaaataggacttca 233  Q
    ||||||||| |||||||||||||||||||| |||||    
T  19854651 atataagttatagactttagagaaaataggtcttca 19854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 22585080 - 22585308
Alignment:
Q  10 tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||| | | |||||| |||||||||||||||||||||||| ||||||||||||||| || | |||||||||||||| ||||||    
T  22585080 tgaggattatttttagtgtttcaagtgagaactattattttactaagttactagtgtagtaattagttgtgagccggtaagtgatcgttgttattatttt 22585179  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttc 207  Q
    | ||||||||||||||||||||||||       |||| ||||| || | |||||||||||||||||||||||| |||||||||||||| |||||||  ||    
T  22585180 accgttaagtgagtaaaaacatttta-------gaattagtgagttaagcccactaaggcattagggttaagctcatttgagaagagcctatataaactc 22585272  T
Q  208 tagactttagagaaaataggacttcatttcatttca 243  Q
    | | |||||||||||||||   ||||||||||||||    
T  22585273 ttgtctttagagaaaatagattttcatttcatttca 22585308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 22589911 - 22590139
Alignment:
Q  10 tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||| | | |||||| |||||||||||||||||||||||| ||||||||||||||| || | |||||||||||||| ||||||    
T  22589911 tgaggattatttttagtgtttcaagtgagaactattattttactaagttactagtgtagtaattagttgtgagccggtaagtgatcgttgttattatttt 22590010  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagttc 207  Q
    | ||||||||||||||||||||||||       |||| ||||| || | |||||||||||||||||||||||| |||||||||||||| |||||||  ||    
T  22590011 accgttaagtgagtaaaaacatttta-------gaattagtgagttaagcccactaaggcattagggttaagctcatttgagaagagcctatataaactc 22590103  T
Q  208 tagactttagagaaaataggacttcatttcatttca 243  Q
    | | |||||||||||||||   ||||||||||||||    
T  22590104 ttgtctttagagaaaatagattttcatttcatttca 22590139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 32352736 - 32352508
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  32352736 aaattcatgtgaggattatttttagtt--------agaaccattattttactaagttattagtgtggtaattaattgtgagtcggtaagtgatcgttgtt 32352645  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||| || | ||||||| |  || ||||||||||||||| ||||||||| |||    
T  32352644 agtattttaccgttaagtgagtagaaacattttataattgtgtatgagtgagttaagcccactaggatatcagggttaagcccattggagaagagcctat 32352545  T
Q  200 ataagttctagactttagagaaaataggacttcattt 236  Q
    ||||   || | ||| |||||||||||| ||||||||    
T  32352544 ataaacccttgtcttaagagaaaataggtcttcattt 32352508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 34967610 - 34967364
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||| ||||||||||||| ||| | | ||||||||||||||||||||||||||||||| ||  ||||||||||  || | |||||||||||    
T  34967610 aaattcatggtgaagattatttttagtatttcaagtgagaaccattattttactaagttactagtgtagtggttagttgtgaaccggtaagtgatcgttg 34967511  T
Q  99 ttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| |||||||| |||||||||||| |||||||||  |||| || ||||||||| || | |||||||||||||||||||||||||||||||||| ||||     
T  34967510 ttattattttactgttaagtgagtagaaacatttttcaattagtaaatgagtgagttaagcccactaaggcattagggttaagcccatttgagatgagcc 34967411  T
Q  197 tatataagttctagactttagagaaaataggacttcatttcatttca 243  Q
    |||||||  ||| | ||||||||||||||||  ||||||||||||||    
T  34967410 tatataaactcttgtctttagagaaaataggttttcatttcatttca 34967364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 22461604 - 22461852
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttt-agcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| |||||||||||||||||||||  || |||||||||||||||||||||||||||||||  || ||||   |||| || | ||||||| |||    
T  22461604 aaattcatggtgaggattatttttagtgtttcgagtgagaaccattattttactaagttactagtgtaatatttagaaatgagccgttaagtgatcattg 22461703  T
Q  99 ttagtattttacg-ttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagct 196  Q
    ||| ||||||||  ||||||||||| |||||||||  |||| |||||||||||| || | ||||||||||||||||||||||||||||||| || ||||     
T  22461704 ttattattttactattaagtgagtagaaacatttttgaattagtgaatgagtgagttaagcccactaaggcattagggttaagcccatttgggaggagca 22461803  T
Q  197 tatataagttctagactttagagaaaa--taggacttcatttcatttca 243  Q
    ||||||| |||||||||||||||||||  ||||  ||||||||||||||    
T  22461804 tatataatttctagactttagagaaaaattaggttttcatttcatttca 22461852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 15004433 - 15004672
Alignment:
Q  9 gtgaggattattttt--agtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtat 105  Q
    |||||||||||||||  ||||||| | | ||||||||||||||||||||||||||||||||  ||||||||||||| || | |||||||||||||| |||    
T  15004433 gtgaggattatttttttagtgtttcaagtgagaaccattattttactaagttactagtgtgccaattagttgtgagccggtaagtgatcgttgttattat 15004532  T
Q  106 ttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || | ||||| ||||||| |||||||||| |||| |||| ||||||| || | ||||||||||| |||||||||||||||||||||| || | |||||||    
T  15004533 ttaaccgttatgtgagtagaaacattttagaattagtgattgagtgagttaagcccactaaggcgttagggttaagcccatttgagatgaacctatataa 15004632  T
Q  204 gttctagactttagagaaaataggacttcatttcatttca 243  Q
      ||| | ||||||||||||||||  ||||||||||||||    
T  15004633 actcttgtctttagagaaaataggttttcatttcatttca 15004672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 23223473 - 23223244
Alignment:
Q  19 tttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaag 116  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||||||||  || ||||  ||| | |||||||||||| ||||||| ||||||     
T  23223473 tttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaatttattatgagctgataattgatcgttgttattattttaccgttaaa 23223374  T
Q  117 tgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctagactt 214  Q
    |||||| |||||||||  |||| || ||||||||| |||| |||| ||||||||| |||||||||||||||||||| |||| |||||||||||||| |||    
T  23223373 tgagtagaaacatttttgaattagttaatgagtgagttgagcccattaaggcattaagggttaagcccatttgagaggagcatatataagttctagtctt 23223274  T
Q  215 tagag-aaaataggacttcatttcatttca 243  Q
    ||||| ||||||||  ||||||||||||||    
T  23223273 tagagaaaaataggttttcatttcatttca 23223244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 29157962 - 29158146
Alignment:
Q  9 gtgaggattatttt-tagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    |||||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||| ||||    
T  29157962 gtgaggattattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagtggtgagccggtaagtgatcgttgttactatt 29158061  T
Q  107 tta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgag 189  Q
    ||| ||||||||||||| ||| |||||| |||| |||| ||||||| || | |||||||||||||||||||||||||||||||||    
T  29158062 ttaccgttaagtgagtagaaatattttagaattagtgattgagtgagttaagcccactaaggcattagggttaagcccatttgag 29158146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 31467099 - 31467290
Alignment:
Q  13 ggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cg 111  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||| ||    
T  31467099 ggattatttttagtattt-agtgagaaccattattttactaagttactagtgtggtaaatagttatgagtcggtaagtgatcgttgttagtattttaccg 31467197  T
Q  112 ttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataag 204  Q
    ||||||| ||| ||| |||||| ||||| || ||||||  || | ||||||||| ||||||||||||||||||||||||| ||  ||||||||    
T  31467198 ttaagtgtgtagaaatattttagaattgagattgagtggtttaagcccactaagacattagggttaagcccatttgagaatagtctatataag 31467290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 18506869 - 18507022
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  18506869 aaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccagtaagtgatcgttg 18506968  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtga 150  Q
    ||| ||||||| ||||||||||||| |||||||||  |||| ||||||||||||    
T  18506969 ttattattttaccgttaagtgagtataaacatttttgaattagtgaatgagtga 18507022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 22582290 - 22582433
Alignment:
Q  10 tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||| | | |||||| |||||||||||||||||||||||| ||||||||||||||| || | |||||||||||||| ||||||    
T  22582290 tgaggattatttttagtgtttcaagtgagaactattattttactaagttactagtgtagtaattagttgtgagccggtaagtgatcgttgttattatttt 22582389  T
Q  109 a-cgttaagtgagtaaaaacattttataatt-gtgaatgagtga 150  Q
    | |||||||||||||||||||||||| |||| |||| |||||||    
T  22582390 accgttaagtgagtaaaaacattttagaattagtgattgagtga 22582433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 29606097 - 29605935
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaac 127  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||| || | ||||| | |||||||||||||| ||||||||| ||| ||||    
T  29606097 tttagtgagaaccattattttaccaagttactagtgtggtaaatagttgtgagccggtaagtgaccattgttagtattttaccgttaagtgtgtagaaac 29605998  T
Q  128 attttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgaga 190  Q
    |||||| ||| |||| |||||   || | |||||||||||||||||||||| |||||||||||    
T  29605997 attttagaatcgtgattgagtaggttaagcccactaaggcattagggttaaacccatttgaga 29605935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 21931939 - 21931696
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcg---ttgttagta 104  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||   || ||| ||    
T  21931939 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtagtaattagttgtgagccggtaagtgatcgttattattatta 21931840  T
Q  105 tttta-cgttaagtgagtaaaaacattttataattg--tgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttata 200  Q
    ||||| ||| |||||||||||||||||||  || ||  | | | | ||  || | |||| ||||||||| ||||||||||||| |||||| |||| ||||    
T  21931839 ttttaccgtgaagtgagtaaaaacattttgcaaatggtttagtaaatgggttaagcccattaaggcattaagggttaagcccaattgagaggagcctata 21931740  T
Q  201 taagttctagactttagag-aaaataggacttcatttcatttca 243  Q
    ||| |||||| |||||||| ||||||||  ||||||||||||||    
T  21931739 taaattctagtctttagagaaaaataggttttcatttcatttca 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 22848791 - 22848617
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgtt 113  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||| || | ||| | | | |||||||||||| ||||    
T  22848791 attatttttggtgtcttagtgagaaccattattttactaagttactattgtggtaaatagttgtgagccggtaagtaaccatagttagtattttaccgtt 22848692  T
Q  114 aagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttga 188  Q
    ||||| ||| ||| |||||| |||||||| || |||  || | |||||||||||||||||||| |||||||||||    
T  22848691 aagtgtgtagaaagattttagaattgtgattgggtgggttaagcccactaaggcattagggttgagcccatttga 22848617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 33537882 - 33537951
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgt 78  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  33537882 gtgaggattatttttagtgttttagtgagaaccattattttgctaagttactagtgtagtaattagttgt 33537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 17013257 - 17013373
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| || | ||||| |||||||| |||||||   ||||||||||| ||||||||||    
T  17013257 gagaaccattattttactaagttacttgtgtggtaattagtcgtgagccggtaagtgaccgttgttattattttattattaagtgagtagaaacatttta 17013356  T
Q  134 taatt-gtgaatgagtg 149  Q
     |||| |||||||||||    
T  17013357 gaattagtgaatgagtg 17013373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 18629102 - 18629211
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||   || | | ||| |||||||||||||||    
T  18629102 gtgaggattatttttagtgttttagtgagaaccat--ttttactaagttactagtgtagtaattagttgtgtaccgttaaatgaccgttgttagtatttt 18629199  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  18629200 accgttaagtga 18629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 17082694 - 17082794
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||  ||||| ||||||||| ||||  || | ||||| |||||||||||||||    
T  17082694 gtgaggattattttaagtgttt-agtgagaaccattattttactaagttatgagtgtagtaattagtggtgaaccgtttagtgaccgttgttagtatttt 17082792  T
Q  109 ac 110  Q
    ||    
T  17082793 ac 17082794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 17547171 - 17547239
Alignment:
Q  8 tgtgaggattatttttagtgttttagcgagaaccatta-ttttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  17547171 tgtgaagattatttttagtgttttagggagaaccattatttttactaagttactagtgtagtaattagt 17547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 18381312 - 18381405
Alignment:
Q  16 ttatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac 110  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||  |    |||| ||||||||||| |||||||||||    
T  18381312 ttatttttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagtattttaccgataagtgatcgttgctagtattttac 18381405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 25654867 - 25654811
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  25654867 gtgaggattatttttagtgttttagtgagaaccattattttgcaaagttactagtgt 25654811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 18629207 - 18629305
Alignment:
Q  88 agtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||||||| |||||||||||| ||| |||||||| |||||||||| |||||||  ||||||  || |  |||||||||||||||||||| |||||||    
T  18629207 agtgatcgttattagtattttaccgttgagtgagtagaaacattttagaattgtgtttgagtgggttaagtccactaaggcattagggttaggcccatt 18629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 19171295 - 19171238
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgt 65  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  19171295 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgt 19171238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 14153014 - 14152908
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttat 134  Q
    |||||||||||||||||||||||||||||| |||||||||  |    || | ||||| |||| ||||||||||| |||| ||| |||| ||||||||||     
T  14153014 agaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttattagtattttaccgttgagttagtagaaacattttac 14152915  T
Q  135 aattgtg 141  Q
    |||||||    
T  14152914 aattgtg 14152908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 16887312 - 16887377
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||| |||| || |||||||||    
T  16887312 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttgctagagtagtaattagt 16887377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 15079263 - 15079313
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttacta 61  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  15079263 tgaggattatttttagtgttt-agtgagaaccgttattttactaagttacta 15079313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 25654773 - 25654675
Alignment:
Q  88 agtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||||||| |||||||||||| |||||| | ||| |||||||||| |||||||  ||||||  || |  |||||||||||||| ||||| |||||||    
T  25654773 agtgatcgttattagtattttaccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaagtccactaaggcattaaggttaggcccatt 25654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 14128866 - 14128761
Alignment:
Q  37 gaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttata 135  Q
    ||||||||||||||||||||||||||||| |||||| ||  |    || | ||||  |||| ||||||||||| |||||||| |||| |||||||||| |    
T  14128866 gaaccattattttactaagttactagtgtagtaattggtattttaccgttaagtggccgttattagtattttaccgttaagttagtagaaacattttaca 14128767  T
Q  136 attgtg 141  Q
    ||||||    
T  14128766 attgtg 14128761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 26519122 - 26519179
Alignment:
Q  9 gtgaggattatttttagtgtttt-agcgagaaccatta-ttttactaagttactagtg 64  Q
    ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  26519122 gtgagaattatttttagtgttttaagtgagaaccattatttttactaagttactagtg 26519179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 25366738 - 25366789
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccatta-ttttactaagttact 60  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  25366738 gtgaggattatttttagtg-tttagtgagaaccattatttttactaagttact 25366789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 16299525 - 16299591
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| || || || ||||||| ||||||||||||||||||||||| || |||||||    
T  16299525 gtgagaattatttttaatggtt-agtgagaacccttattttactaagttactagtgtagtgattagtt 16299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 16555688 - 16555735
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  16555688 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 16555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 16632244 - 16632291
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  16632244 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 16632291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17854894 - 17854949
Alignment:
Q  7 atgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttacta 61  Q
    |||||||||||||||||||| ||  | | |||||||||||||||||||||||||||    
T  17854894 atgtgaggattatttttagtattgcaagtgagaaccattattttactaagttacta 17854949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 18838788 - 18838835
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  18838788 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 18838835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 16232589 - 16232543
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  16232589 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 16232543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 19610714 - 19610668
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  19610714 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 19610668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 21623926 - 21623861
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||| |||| || ||||| ||||||||||||| |||||||| || |||||||||    
T  21623926 gtgagaattatttttagcgttt-agtgagaatcattattttactacgttactagggtagtaattagt 21623861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 4991770 - 4991729
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  4991770 gagaacccttattttactaagttactagtgttgtgattagtt 4991729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 9276625 - 9276584
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  9276625 gagaacccttattttactaagttactagtgtagtgattagtt 9276584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 14625693 - 14625734
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  14625693 gagaacctttattttactaagttactagtgtagtgattagtt 14625734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 16814566 - 16814607
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  16814566 gagaacccttattttactaagttactagtgtagtgattagtt 16814607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 19299932 - 19299891
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  19299932 gagaacccttattttactaagttactagtgtagtgattagtt 19299891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 19630004 - 19629963
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  19630004 gagaacccttattttactaagttactagtgtagtgattagtt 19629963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 23222472 - 23222399
Alignment:
Q  171 agggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
    ||||||||||| |||||||| |||| |||||||||| ||  |||||||| ||||||||  ||||||| ||||||    
T  23222472 agggttaagccgatttgagaggagcctatataagttataatctttagagaaaaataggttttcattttatttca 23222399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 25920338 - 25920274
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||||||||| ||| ||  |||||||||||||| ||||||||||||  | |||||||||    
T  25920338 tgaggattatttttagtattt-agtaagaaccattattttgctaagttactaggatagtaattagt 25920274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 10489395 - 10489355
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  10489395 agaacccttattttactaagttactagtgtagtgattagtt 10489355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 23224213 - 23224257
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtg 64  Q
    |||||||||||||| ||||| | |||||||||||| |||||||||    
T  23224213 ttttagtgttttagtgagaatcgttattttactaaattactagtg 23224257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 23978456 - 23978412
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  23978456 ttagtgagaacctttattttactaagttactagtgtagtgattag 23978412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 6095411 - 6095177
Alignment:
Q  9 gtgaggattatttt-tagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||| |||||||| ||||| || | |||||||||||||| ||||    
T  6095411 gtgaggattattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtgataattagtggtgagccggtaagtgatcgttgttattatt 6095312  T
Q  107 tta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataag 204  Q
    ||| |||||||||||||||||||||||| |||| |||| ||||||| || | ||||||||||||||||||||||| |||||||||| |||||| |||||     
T  6095311 ttaccgttaagtgagtaaaaacattttagaattagtgattgagtgagttaagcccactaaggcattagggttaagtccatttgagaggagcttgtataaa 6095212  T
Q  205 ttctagactttagagaaaataggacttcatttcat 239  Q
     ||| | ||||||||||||||||  ||||||||||    
T  6095211 ctcttgtctttagagaaaataggttttcatttcat 6095177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 9638161 - 9637923
Alignment:
Q  8 tgtgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||| || | | |||||||||||| ||||    
T  9638161 tgtgaggattatttttagtgtttcaattgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaaatgatcgttgttattatt 9638062  T
Q  107 tta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataag 204  Q
    ||| ||||||||||||| |||||||||| |||| |||||  ||||| || | |||||||||||||||||||||||| ||||||||| |||| |||||||     
T  9638061 ttaccgttaagtgagtagaaacattttagaattagtgaacaagtgagttaagcccactaaggcattagggttaagctcatttgagaggagcctatataaa 9637962  T
Q  205 ttctagactttagagaaaataggacttcatttcatttca 243  Q
     ||| | |||||| |||||||||  ||||||||||||||    
T  9637961 ctcttgtctttagcgaaaataggttttcatttcatttca 9637923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 24278490 - 24278252
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||| ||| || | | |||||||||||| |||||    
T  24278490 gtgaggattatttttagtgtttcaagtgagaaccattattttaccaagttactagtgtggtaattagttgcgagccggtaaatgatcgttgttattattt 24278391  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || ||||||||||||| |||||||||| |||| |||||||||||  || | |||||||||||||||||| |||  |||||||||||||||  ||||||||    
T  24278390 tatcgttaagtgagtagaaacattttagaatttgtgaatgagtgggttaagcccactaaggcattagggataaagccatttgagaagagccgatataagt 24278291  T
Q  206 tctagactttagagaaaa-taggacttcatttcatttca 243  Q
    |||||||||||||||||| ||||  | ||||||||||||    
T  24278290 tctagactttagagaaaagtaggtttacatttcatttca 24278252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 25595721 - 25595532
Alignment:
Q  37 gaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttata 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||||||  |    
T  25595721 gaaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatctttgttagtattttaccgttaagtgagtagaaacatttttga 25595622  T
Q  136 att-gtgaatgagtgaattgatcccactaagg-cattagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
    ||| |||||||||||| || | ||||||||||  || |||||||||||||||||||| |||| |||||||||| ||| ||||||||||||    
T  25595621 attagtgaatgagtgagttaagcccactaaggtaataagggttaagcccatttgagaggagcctatataagttatagtctttagagaaaa 25595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 11010447 - 11010191
Alignment:
Q  1 aaattcatg-tgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaat--------tagttgtgagtcgatgagt 90  Q
    ||||||||| |||||||||| |||||||||| | | |||||||||||||||||||||||||||||||||||||        |||||||||| || | |||    
T  11010447 aaattcatggtgaggattatatttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaatgtggtaattagttgtgagccggtaagt 11010348  T
Q  91 gatcgttgttagtattttac-gttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattaggg-ttaagcccatttg 187  Q
    ||||||||||| |||||||| |||||||||||| ||||||||   |||| |||||||||||| || | |||||||||||||||||| |||||||||||||    
T  11010347 gatcgttgttattattttaccgttaagtgagtagaaacatttatgaatttgtgaatgagtgagttaagcccactaaggcattaggggttaagcccatttg 11010248  T
Q  188 agaagagcttatataagttctagactttagag-aaaataggacttcatttcatttca 243  Q
    ||| |||| |||||||||||||| |||||||| |||||||   ||||||||||||||    
T  11010247 agaggagcctatataagttctagtctttagagaaaaatagattttcatttcatttca 11010191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 220
Target Start/End: Complemental strand, 18537457 - 18537271
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    ||||||||||||||||||||||||||||||||||||||| || |||| || | | |||||||||||| ||||||| ||||||||||||| |||||||||     
T  18537457 gagaaccattattttactaagttactagtgtggtaatta-ttttgagccggtaaatgatcgttgttattattttaccgttaagtgagtagaaacattttt 18537359  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataagttctagactttagaga 220  Q
     |||| || ||||||||| ||||  ||||||| ||||| |||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  18537358 gaattagttaatgagtgagttga-gccactaaagcattaagggttaagcccatttgagaggagcctatataagttctagtctttagaga 18537271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16292341 - 16292484
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||| || | ||||||||||||   |||||    
T  16292341 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtgttaattagttgtgagccggtaagtgatcgttgtatttattt 16292440  T
Q  108 ta-cgttaagtgagtaaaaacattttataa-ttgtgaatgagtg 149  Q
    || ||||||||||||| |||||||||| || |||||||||||||    
T  16292441 taccgttaagtgagtagaaacattttagaatttgtgaatgagtg 16292484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 24885394 - 24885283
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||  || | ||||| |||||||||||||||    
T  24885394 gtgaggattatctttagtgttttagtgagaaccattattttactaagttactagtgtagtaattagttgtgaaccgttaagtgaccgttgttagtatttt 24885295  T
Q  109 ac-gttaagtga 119  Q
    || |||||||||    
T  24885294 actgttaagtga 24885283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 16292484 - 16292556
Alignment:
Q  172 gggttaagcccatttgagaagagcttatataagttctagactttagagaaaataggacttcatttcatttcac 244  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16292484 gggttaagccaatttgagtagagcatatataagttctagactttagagaaaataggtcttcatttcatttcac 16292556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 22284704 - 22284638
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22284704 gtgagaattatttttagtgttt-agcgagaaccattattttactaagttactagtgtagtaattagtt 22284638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 29115101 - 29114882
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||| ||| ||||||||||| | | ||||||||||||||||||||||||||||||| || |||||| ||||| |  | |||||||||| ||| |||||    
T  29115101 gtgagggttacttttagtgtttcaagtgagaaccattattttactaagttactagtgtagtgattagtcgtgagccagtaagtgatcgttattattattt 29115002  T
Q  108 ta-cgttaagtgagtaaaaacattttataattg--tgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataa 203  Q
    || |||| ||||||||  |||||||  | | ||  | | | | ||  || | |||  ||||||||| |||||||||||||||||| | |||| |||||||    
T  29115001 taccgttcagtgagtagtaacatttcgtgaatggtttagtaaatgggttaagccctttaaggcattaagggttaagcccatttgaaaggagcctatataa 29114902  T
Q  204 gttctagactttagagaaaa 223  Q
    ||||||| ||||||||||||    
T  29114901 gttctagtctttagagaaaa 29114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 2155321 - 2155431
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||  |    |||| ||||| ||||| |||||||||    
T  2155321 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagtattttaccgataagtgaccgttgctagtatttt 2155419  T
Q  109 a-cgttaagtga 119  Q
    | ||||||||||    
T  2155420 accgttaagtga 2155431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 2739 - 2803
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||| |||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||    
T  2739 tgagaattatttttagtgttt-agtgataaccattattttactaagttactagtgtagtaattagt 2803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 43646618 - 43646542
Alignment:
Q  9 gtgaggattatttttagtgtttt-----agcgagaaccattattttactaagttactagtgtggtaattagttgtga 80  Q
    |||||||||||||||||||||||     || ||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  43646618 gtgaggattatttttagtgtttttttttagtgagaaccattattttaccaagttactagtgtagtaattaattgtga 43646542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 24885287 - 24885189
Alignment:
Q  88 agtgatcgttgttagtattttacg-ttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||||||| ||||||||||||  || |||||||| |||||||||| |||||||  ||||||  || |  ||||||||||||||| ||||||||||||    
T  24885287 agtgatcgttattagtattttaccattgagtgagtagaaacattttagaattgtgtttgagtgggttaagtccactaaggcattagagttaagcccatt 24885189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 28030763 - 28030823
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||| | ||||||||||    
T  28030763 attatttttaatgttt-agtgagaaccattattttactaagttactagtatagtaattagtt 28030823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 16936296 - 16936230
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  16936296 gtgagaattatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 16936230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 17006956 - 17006890
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  17006956 gtgagaattatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 17006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24086953 - 24087010
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    |||||||||||||||| || | |||||||||||||||||||||||||| || |||||||    
T  24086953 attatttttagtgttt-agtgggaaccattattttactaagttactagagtagtaatta 24087010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 25306160 - 25306095
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || |||||| ||||||||||||||||||||  || |||||||||    
T  25306160 gtgagaattatttttagtgttt-agtgagaactattattttactaagttactaaagtagtaattagt 25306095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 22256585 - 22256541
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||||||||| || |||||||||||||||||||||||||||||||    
T  22256585 ttttagtgttt-agtgagaaccattattttactaagttactagtgt 22256541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 11230891 - 11230938
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  11230891 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 11230938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 17205051 - 17205004
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||||||||||||| ||||||||||||| || |||||||    
T  17205051 tttagtgagaaccattattttaccaagttactagtgtagtgattagtt 17205004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 19660614 - 19660563
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagttgtga 80  Q
    ||||| ||||||| |||||||||||||||||| |||  ||||||||||||||    
T  19660614 tttagtgagaaccgttattttactaagttacttgtgcagtaattagttgtga 19660563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 19668641 - 19668695
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||| || ||||||||||||||||||||||||||||  | |||||||||    
T  19668641 ttttagtgttt-agtgagaaccattattttactaagttactagaatagtaattagt 19668695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 24685335 - 24685382
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  24685335 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 24685382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 33128769 - 33128722
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  33128769 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 33128722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 5888198 - 5888244
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  5888198 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 5888244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 16446480 - 16446407
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattatttt-actaagttactagtgtggtaattagttgtgag 81  Q
    |||||||||||||| ||||||| | | ||||||||||||||| |||| |||||||||||||||| | ||||||||    
T  16446480 gtgaggattatttt-agtgtttcaagtgagaaccattatttttactatgttactagtgtggtaaatggttgtgag 16446407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 19688969 - 19689015
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  19688969 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 19689015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 23821299 - 23821364
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||| ||||||||| |||||||||||| ||  ||||||||    
T  23821299 gtgagaattatttttagtgttt-agtgagaatcattattttgctaagttactagggtaataattagt 23821364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 23830378 - 23830443
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||| ||||||||| |||||||||||| ||  ||||||||    
T  23830378 gtgagaattatttttagtgttt-agtgagaatcattattttgctaagttactagggtaataattagt 23830443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 24294015 - 24294080
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||| ||||||||||| || ||||||| ||||||| |||||||||||| || |||||||||    
T  24294015 gtgagaattacttttagtgttt-agtgagaacctttattttgctaagttactagggtagtaattagt 24294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 24841611 - 24841577
Alignment:
Q  38 aaccattattttactaagttactagtgtggtaatt 72  Q
    ||||||||||||||||||||||||||| |||||||    
T  24841611 aaccattattttactaagttactagtgcggtaatt 24841577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 25213762 - 25213716
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  25213762 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 25213716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 23777609 - 23777650
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  23777609 gagaacccttattttactaagttactagtgtagtgattagtt 23777650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 24826260 - 24826305
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||| ||||||| ||||||||||||||||||||||| || ||||||    
T  24826260 ttagtgagaacccttattttactaagttactagtgtagtgattagt 24826305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 3798172 - 3798216
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  3798172 ttagtgagaacctttattttactaagttactagtgtagtgattag 3798216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 7507389 - 7507444
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||||||| || ||||||| |||||||| |||||||||||||| || |||||||    
T  7507389 ttttagtgttt-agtgagaacccttattttaataagttactagtgtagtgattagtt 7507444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 8944533 - 8944489
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  8944533 ttagtgagaacctttattttactaagttactagtgtagtgattag 8944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 12635437 - 12635481
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  12635437 ttagtgagaacctttattttactaagttactagtgtagtgattag 12635481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 12641213 - 12641257
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  12641213 ttagtgagaacctttattttactaagttactagtgtagtgattag 12641257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 12729079 - 12729035
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  12729079 ttagtgagaacctttattttactaagttactagtgtagtgattag 12729035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 34825162 - 34825118
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  34825162 ttagtgagaacctttattttactaagttactagtgtagtgattag 34825118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 42177525 - 42177561
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42177525 tttagtgagaacccttattttactaagttactagtgt 42177561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 38288 - 38049
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  38288 gtgagaattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttagtattt 38189  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || |||||||||| || |||||||||| |||| | |  ||||||  || | |||||||||||||||||||||| |||||||||||||||  |||||||||    
T  38188 taccgttaagtgaatataaacattttagaattagagtttgagtgggttaagcccactaaggcattagggttaaacccatttgagaagagtctatataagt 38089  T
Q  206 tctagactttagag-aaaataggacttcatttcatttcac 244  Q
    | ||||||| |||| ||||||||  | |||||||||||||    
T  38088 tttagacttcagagaaaaataggtttacatttcatttcac 38049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 43639 - 43876
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||    ||||    
T  43639 gtgaggattatttttagtgtttcaagtgagaacctttattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgtattaattt 43738  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataagt 205  Q
    || ||||||||||||| |||||||||| |||| |||| || ||||  | | |||||||||||||||||||||||||||||||||| |||| |||||||      
T  43739 taccgttaagtgagtagaaacattttagaattagtgattgggtgagctaagcccactaaggcattagggttaagcccatttgagaggagcctatataaac 43838  T
Q  206 tctagactttagagaaaataggacttcatttcatttca 243  Q
     || | ||||||||||||||||  ||||||||||||||    
T  43839 ccttgtctttagagaaaataggttttcatttcatttca 43876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 5329 - 5134
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| |||||||||||||||    
T  5329 gtgaagattagttttagtcttttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtatttt 5230  T
Q  109 ac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    || |||||||| ||| | |||||||| |||||| | ||||||  || |||||||||||||||||||||| |||| ||||||||| ||| |||||||    
T  5229 actgttaagtgggtagacacattttagaattgtaattgagtgggttaatcccactaaggcattagggttgagccaatttgagaatagcctatataa 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 32197 - 32244
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  32197 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 32244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 14766 - 14526
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||   |||||    
T  14766 gtgaggattatttttaatgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaggtgatcgttgtatttattt 14667  T
Q  108 ta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagccc-atttgagaagagcttatataagt 205  Q
    || |||||||||||| ||||||||||  |||||||||||||||  || | ||||||||| |||||||||||||||| ||||||| ||| | |||||||||    
T  14666 taccgttaagtgagt-aaaacattttcgaattgtgaatgagtgggttaagcccactaagacattagggttaagcccaatttgagtagaacctatataagt 14568  T
Q  206 tctagactttagag--aaaataggacttcatttcatttcact 245  Q
    | ||||||| ||||  ||||||||  | ||||||||||||||    
T  14567 tttagacttgagagaaaaaataggtttacatttcatttcact 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 422 - 634
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttacg-ttaagtgagtaaaaacatttta 133  Q
    ||||||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||||||| ||||||||  ||||||||||| |||||||||     
T  422 gagaaccgttatttttctaagttactattgtggtaattagttatgagccagtaagtgatcgttgttattattttactattaagtgagtagaaacattttt 521  T
Q  134 taatt-gtgaatgagtgaattgatcccactaaggcattag-ggttaagcccatttgagaagagcttatataagttctagactttagag-aaaataggact 230  Q
     |||| |||||||||||| || | ||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  |    
T  522 gaattagtgaatgagtgagttaagcccactaagacattagaggttaagcccatttgagaggagcctatataagttctagactttagagaaaaataggttt 621  T
Q  231 tcatttcatttca 243  Q
    |||||| ||||||    
T  622 tcattttatttca 634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6156 - 5953
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||  |||||||||||||||| || |||||||| || |||||||||||||||||||||||| |||||||||| || | ||||| |||||||    
T  6156 aaattcatgtgacaattatttttagtgtttcagtgagaaccactactttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgtt 6057  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
    || |||||| | ||||||| ||| |||||||||| | |||| | ||||||  || | |||||||||||||||||||||||| |||||||||| ||| |||    
T  6056 agcattttaccattaagtgtgtagaaacattttagagttgtaattgagtgggttaagcccactaaggcattagggttaagctcatttgagaatagcctat 5957  T
Q  200 ataa 203  Q
    ||||    
T  5956 ataa 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9234 - 9001
Alignment:
Q  1 aaattcat-gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttg 98  Q
    |||||||| |||||||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| ||    
T  9234 aaattcatagtgaggattatttttagtttttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtaatcgctg 9135  T
Q  99 ttagtatttta-cgttaagtgagtaaaaacattttataa-ttgtgaatg---agtgaattgatcccactaaggcattagggttaagcccatttgagaaga 193  Q
    ||| ||||||| ||||||||||||| ||| |||||| || || ||| ||   ||||| || | |||||||||| ||||||||||||||||||||||| ||    
T  9134 ttattattttaccgttaagtgagtagaaatattttagaatttatgattgagtagtgagttaagcccactaaggtattagggttaagcccatttgagagga 9035  T
Q  194 gcttatataagttctagactttagagaaaatagg 227  Q
    || |||||||   || | ||||||||||||||||    
T  9034 gcctatataaacccttgtctttagagaaaatagg 9001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 26503 - 26706
Alignment:
Q  1 aaattcatgtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgtt 100  Q
    ||||||||||||  |||||||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||||||| || | |||||  ||||||    
T  26503 aaattcatgtgacaattatttttagtgtttcagtgagaaccattactttactaagttactagtgtggtaaatagttgtgagccggtaagtgacagttgtt 26602  T
Q  101 agtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttat 199  Q
    || |||||| | ||||||| ||| |||||||||| | |||| | ||||||  || | |||||||||||||||||||||||| |||||||||| ||| |||    
T  26603 agcattttaccattaagtgtgtagaaacattttaaagttgtaattgagtgggttaagcccactaaggcattagggttaagctcatttgagaatagcctat 26702  T
Q  200 ataa 203  Q
    ||||    
T  26703 ataa 26706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 86235 - 86055
Alignment:
Q  11 gaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta- 109  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || | ||||| | |||||||||||| |     
T  86235 gaggattatttttagtgttttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggtaagtgacccttgttagtatttgac 86136  T
Q  110 cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaa 191  Q
    ||||||||| ||| ||| |||||| |||||||| ||||||   | | |||||||||| |||| |||||||||||||||||||    
T  86135 cgttaagtgtgtagaaatattttagaattgtgattgagtgggctaagcccactaaggaatta-ggttaagcccatttgagaa 86055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 54062 - 53886
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||||  |    || | ||||| ||||||||||||||    
T  54062 gtgagaattatttttagtgttt-agtgagaaccattatttttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattt 53964  T
Q  108 tac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
     || |||||| | ||| |||||||||| ||||| |   |||||| || |  ||||||||| ||||||||||||| ||||    
T  53963 cacagttaagagtgtagaaacattttagaattgagttggagtgagttaagtccactaagg-attagggttaagctcatt 53886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 3966 - 3774
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| || ||||||| || | |||||||||||||||||||||    
T  3966 gtgaggattatttttagtgttttagtgtgaaccattattttactaagttactagtgtggtaaataattgtgagccggtaagtgatcgttgttagtatttt 3867  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    | ||||||||  ||| ||| |||||| |||||||| || |||   | | |||||||||||||||||||| |||||||||||||  ||| |||||||    
T  3866 accgttaagt--gtagaaatattttagaattgtgattgggtgggat-agcccactaaggcattagggttgagcccatttgagagtagcctatataa 3774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 7191 - 7429
Alignment:
Q  9 gtgaggattatttt-tagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||| |||||||| ||||| || | |||||||||||||| ||||    
T  7191 gtgaggattattttgtagtgtttcacgtgagaaccattattttactaagttactagtgtgctaattagtggtgagccggtaagtgatcgttgttattatt 7290  T
Q  107 tta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataag 204  Q
    ||| ||||||||||||| |||||||||| |||| ||||  |||||| ||    |||||||||||||||||||||| | |||||||| |||| |||||||     
T  7291 ttaccgttaagtgagtagaaacattttagaattagtgatggagtgagttatatccactaaggcattagggttaagtcgatttgagaggagcctatataaa 7390  T
Q  205 ttctagactttagagaaaataggacttcatttcatttca 243  Q
     | |   |||||||||||||| |  ||||||||||||||    
T  7391 ctattttctttagagaaaatatgttttcatttcatttca 7429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 32939 - 33141
Alignment:
Q  8 tgtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatt 106  Q
    ||||||||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||| ||||||| || | |||||||||||||| ||||    
T  32939 tgtgaggattatttttagtgtttcaagtaagaaccattattttactaagttactagtatggtaattaattgtgagccggtaagtgatcgttgttattatt 33038  T
Q  107 tta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataa 203  Q
    ||| ||||||||||||| ||| |||||  |||| |||||||||||| || | ||| |||||||||| |||||||||| ||||||| | |||  |||||||    
T  33039 ttaccgttaagtgagtagaaatatttttgaattagtgaatgagtgagttaagcccgctaaggcattaagggttaagcacatttgaaaggagtctatataa 33138  T
Q  204 gtt 206  Q
    |||    
T  33139 gtt 33141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 2301 - 2540
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||| ||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||| |  |||||| ||||| ||| |||||    
T  2301 gtgatgattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtagtaattagttgtgagccagtgagtggtcgttattattattt 2400  T
Q  108 tacgttaagtgagtaaaaacattttataattg--tgaatgagtgaattgatcccactaaggcatt-agggttaagcccatttgagaagagcttatataag 204  Q
      ||||||||||||| ||||||||| ||||||  | | | | ||  || | |||| |||| |||| ||||||||||||| |||||| |||  ||||||||    
T  2401 accgttaagtgagtagaaacattttgtaattggtttagtaaatgggttaagcccattaagacattaagggttaagcccaattgagaggagactatataag 2500  T
Q  205 ttctagactttagag-aaaataggacttcatttcatttca 243  Q
    |||||| |||||||| ||||||||  ||||||||||||||    
T  2501 ttctagtctttagagaaaaataggttttcatttcatttca 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 223
Target Start/End: Original strand, 19472 - 19660
Alignment:
Q  38 aaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttataa 136  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||| |||||||||  ||    
T  19472 aaccattattttgctaagttgctaatgtggtaattagttgtgagccggtgagtggtcgttgttagtattttaccgttaagtgagtagaaacatttttgaa 19571  T
Q  137 tt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
    || ||||  |||||| || | ||||| ||||| || |||||||||||||||||||| |||| |||||||||| ||| ||||||| ||||    
T  19572 ttagtgaccgagtgagttaagcccacaaaggcaataagggttaagcccatttgagaggagcctatataagttatagtctttagaaaaaa 19660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 108738 - 108554
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||  ||||||||||||| | | |||||||||||||||| |||||| ||| |||||||| |||||||||| || | ||||| ||||||||||||||    
T  108738 gtgaggagcatttttagtgtttcaagtgagaaccattattttattaagttgctattgtggtaaatagttgtgagccggtaagtgaccgttgttagtattt 108639  T
Q  108 t-acgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaa 191  Q
    |  ||||||||| ||| |||| ||||| |||||||| ||||||  || | ||||||||||||||| ||||||| |||||||||||    
T  108638 tgtcgttaagtgtgtagaaactttttagaattgtgattgagtgggttaagcccactaaggcattatggttaagaccatttgagaa 108554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 12144 - 12379
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||| || | |||||||| | ||||||||||| |||||||||||| ||||||||||||||||| |||| || | | ||||| || ||| |||||    
T  12144 gtgaggattacttgtggtgttttaagtgagaaccattagtttactaagttattagtgtggtaattagttttgagccggtaaatgatccttattattattt 12243  T
Q  108 ta-cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggc-attagggttaagcccatttgagaagagcttatataag 204  Q
    || | |||||||||||||||||||||  |||| | |||||| ||| || | || |||||||| || |||||||||| |||||||||  ||| ||||||||    
T  12244 tacctttaagtgagtaaaaacatttttgaattagggaatgaatgagttaagccgactaaggcaataagggttaagctcatttgagagaagcctatataag 12343  T
Q  205 ttctagactttagag-aaaataggacttcatttcat 239  Q
    |||||| |||||||| ||||||||  ||||||||||    
T  12344 ttctagtctttagagaaaaataggttttcatttcat 12379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 23207 - 23398
Alignment:
Q  12 aggattatttttagtgttttagcgagaaccatta-ttttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac 110  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| | | |||||| ||     | ||||| |||||||||||||||||    
T  23207 aggattatttttactgttttagtgagaaccattaattttactaagttactagtgtgttgaatagttgcgaactagtaagtgaccgttgttagtattttac 23306  T
Q  111 -gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
     ||||||||  || |||||||||| |||||||| || |||   | | |||||||||||||||||||| |||||||||||||| ||| |||||||    
T  23307 cgttaagtg--tagaaacattttagaattgtgattgggtgggataagcccactaaggcattagggttgagcccatttgagaatagcctatataa 23398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 43362 - 43418
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgt 65  Q
    |||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  43362 gtgacgattatttttagtggattagtgagaaccattattttactaagttactagtgt 43418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 43436 - 43496
Alignment:
Q  125 aacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    ||||||||| |||||||  ||||||  |||| ||||||||||||||| |||||||||||||    
T  43436 aacattttaaaattgtgtgtgagtgggttgaacccactaaggcattacggttaagcccatt 43496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 13489 - 13370
Alignment:
Q  14 gattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cg 111  Q
    ||||| ||||||||||| | | |||||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||| ||| ||||||| ||    
T  13489 gattagttttagtgtttcaagtgagaaccattattttactaagttactagtgcggtaattagttgtgagccggtaagtgatcgttattattattttaccg 13390  T
Q  112 ttaagtgagtaaaaacattt 131  Q
    ||||||||||| ||||||||    
T  13389 ttaagtgagtagaaacattt 13370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 21912 - 22018
Alignment:
Q  14 gattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgt 112  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||  || | |||||  ||||||||||||||| |||    
T  21912 gattatttttagcgttttagcgataaccattattttactaagttactagtgtagtaattagttgtgaaccgttaagtgactgttgttagtattttaccgt 22011  T
Q  113 taagtga 119  Q
    |||||||    
T  22012 taagtga 22018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 22041 - 22111
Alignment:
Q  115 agtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    ||||| || |||||||||| |||||||  ||||||  || |  ||||||||||||||||||||||||||||    
T  22041 agtgaatagaaacattttagaattgtgtttgagtgggttaagtccactaaggcattagggttaagcccatt 22111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 7117 - 6967
Alignment:
Q  35 gagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattttac-gttaagtgagtaaaaacatttt 132  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||| || | ||||| | ||| ||||||||||| ||||||||  || |||||||||    
T  7117 gagaaccattatttttactaagttactagagtggtaaatagttgtgagccggtaagtgaccattgctagtattttaccgttaagtg--tagaaacatttt 7020  T
Q  133 ataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    | |||||||| ||||||  || | |||||||||||||||| ||||||||||||    
T  7019 agaattgtgattgagtgggttaagcccactaaggcattagagttaagcccatt 6967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 6577 - 6452
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||  |||||||||||||  || | |||||||||| ||| |||||    
T  6577 gtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtaataattagttgtgaaccggtaagtgatcgttattattattt 6478  T
Q  108 ta-cgttaagtgagtaaaaacatttt 132  Q
    || |||| |||||||| |||||||||    
T  6477 tatcgttgagtgagtagaaacatttt 6452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 96718 - 96894
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    ||||| || |||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||| ||  || | ||||| ||||||||||| |||    
T  96718 gtgagaatcatttttagtgttttagtgagaaccattatcttact-agttactagtgtggtaaatagttgagaaccgctaagtgaccgttgttagtaattt 96816  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    | ||||||| | ||| ||||| |||| |||||||  ||| ||| || |  ||||||||||||||| ||||||||||||    
T  96817 accgttaagagtgtagaaacaatttaaaattgtgtttgaatgagttaagtccactaaggcattagagttaagcccatt 96894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 500 - 602
Alignment:
Q  9 gtgaggattatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||||| |||| || | |||| ||||||||||| |||    
T  500 gtgaggattatttttagtgtttcaagagagaaccattattttactaagttactagtgtagtaattagttatgagccggtaagtggtcgttgttagtgttt 599  T
Q  108 tac 110  Q
    |||    
T  600 tac 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 610 - 678
Alignment:
Q  135 aattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataa 203  Q
    |||||||| ||||||  || | ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  610 aattgtgattgagtgggttaagcccactaaggcattagggttaagcccatttgagaatagcctatataa 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 6725 - 6785
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  6725 attatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 6785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 25975 - 25859
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacatttta 133  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| || | ||||| |||||||| |||||||   ||||||||||| ||||||||||    
T  25975 gagaaccattattttactaagttacttgtgtggtaattagtcgtgagccggtaagtgaccgttgttattattttattattaagtgagtagaaacatttta 25876  T
Q  134 taatt-gtgaatgagtg 149  Q
     |||| |||||||||||    
T  25875 gaattagtgaatgagtg 25859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 3254 - 3077
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| ||  |    || ||||||| |||||||||||||||    
T  3254 gtgatgattatttttagtgttttagttagaaccatcattttactaagttactagtgtagtaattcgtattttaccgttgagtgaacgttgttagtatttt 3155  T
Q  109 a-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    | |||||||    || ||| |||||| |||||||  ||||||  || |  |||||||||||||||||||| |||||||    
T  3154 accgttaagaatctagaaatattttagaattgtgtttgagtgggttaagtccactaaggcattagggttaggcccatt 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 67498 - 67589
Alignment:
Q  48 ttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttataatt 138  Q
    |||||||||||||| ||||||||||||||||||| || | |||||| ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  67498 ttactaagttactaatgtggtaattagttgtgagccggtaagtgattgttgttattattttaccgttaagagagtagaaacattttataatt 67589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 31776 - 31711
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  31776 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagtgtggtaattagt 31711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 31670 - 31572
Alignment:
Q  88 agtgatcgttgttagtattttacg-ttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    ||||| |||||||||||||||||  ||||| | ||| |||||||||| |||||||  ||||||  || |  |||||||||  |||||||||||||||||    
T  31670 agtgaccgttgttagtattttaccattaagagtgtagaaacattttagaattgtgtttgagtgggttaagtccactaaggatttagggttaagcccatt 31572  T

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Target: scaffold0118 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 33972 - 34038
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  33972 gtgagaattatttttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagtt 34038  T

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Target: scaffold0032 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 93343 - 93409
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||||| || |||||||||    
T  93343 gtgagaattatttttagttttttagtgagaaccattattttactaagttactagagtagtaattagt 93409  T

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Target: scaffold0032; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 104114 - 104213
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttt 108  Q
    |||||||||||||||| ||||| || ||||||| ||||||| ||||||||||||  | ||||||||| ||||  || | ||||| |||||||||||||||    
T  104114 gtgaggattatttttactgttt-agtgagaaccgttatttt-ctaagttactagcatagtaattagtggtgaaccgttaagtgaccgttgttagtatttt 104211  T

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Target: scaffold0032; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 107714 - 107761
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  107714 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 107761  T

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Target: scaffold0032; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 12909 - 12945
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  12909 tttagtgagaacccttattttactaagttactagtgt 12945  T

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Target: scaffold0138 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 21922 - 21986
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  21922 tgaggataatttttagtgttt-agcgagaaccattattttactaagttactagagtagtaattagt 21986  T

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Target: scaffold0006 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 196771 - 196966
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatttt-actaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||| ||||||||| || ||||||||||||||| ||||| ||||||||||||| ||||||  |    || | | ||| ||||||||||||||    
T  196771 gtgagaattattcttagtgttt-agtgagaaccattatttttactaaattactagtgtggttattagtattttaccgttaactga-cgttgttagtattt 196868  T
Q  108 tac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatttgagaagagcttatataag 204  Q
    ||| |||||| | ||| |||||||||| |||||||  ||||||  || |  ||||||||| |||||||||||||||||| ||||| | | ||||||||    
T  196869 taccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaagtccactaaggaattagggttaagcccattagagaataacctatataag 196966  T

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Target: scaffold1295 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 859 - 795
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||    
T  859 gtgagaattatttttagtgttttagtgagaaccattattttgctaagttactagggtagtaatta 795  T

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Target: scaffold0682 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 8081 - 8147
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  8081 gtgagaattattgttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagtt 8147  T

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Target: scaffold0207 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 11415 - 11349
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  11415 gtgagaattattgttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagtt 11349  T

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Target: scaffold0066 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 45745 - 45683
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgt 78  Q
    |||||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||||    
T  45745 attatttttagtgttt-agtgggaaccattattttactaagttactagtgtagtaattagttgt 45683  T

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Target: scaffold0066; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 55131 - 55069
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgt 78  Q
    |||||||||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||    
T  55131 attatttttagtgttt-agtgggaaccattattttactaagtttctagtgtagtaattagttgt 55069  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 70215 - 70114
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattatt-ttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtattt 107  Q
    ||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| ||  || | | ||| ||||||||||| ||    
T  70215 gtgagaattatttttagtgttt-agcgagaaccactattcttactaagttactagtgtggtaaatagttgagaaccgttaaatgaccgttgttagtactt 70117  T
Q  108 tac 110  Q
    |||    
T  70116 tac 70114  T

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Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 70108 - 70010
Alignment:
Q  88 agtgatcgttgttagtattttac-gttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggttaagcccatt 185  Q
    |||||||||||||||||||| || |||||| | ||| |||||||||| |||||||  ||||||  || |  ||||||||| ||||||||||||||||||    
T  70108 agtgatcgttgttagtatttcaccgttaagagtgtagaaacattttagaattgtgtttgagtgggttaagtccactaaggaattagggttaagcccatt 70010  T

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Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 6625 - 6717
Alignment:
Q  37 gaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattt 131  Q
    ||||||||||||||||||||||||||    ||||||||| ||||| || | |||||||||| ||| ||||||| ||||||||||||| ||||||||    
T  6625 gaaccattattttactaagttactag---agtaattagtcgtgagccggtaagtgatcgttattattattttaccgttaagtgagtagaaacattt 6717  T

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Target: scaffold0013; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 36206 - 36141
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||| |||||||||||||| || || |||||||||||||| ||||||||||||| |||||||||    
T  36206 gtgaggaatatttttagtgttt-agtgaaaaccattattttaccaagttactagtgtagtaattagt 36141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 899 - 1003
Alignment:
Q  16 ttatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgtta 114  Q
    ||||||||||||||| |  |||||||||||||||| |||||||  ||||| ||||||||| ||||  || | ||||| ||||||||| |||||| |||||    
T  899 ttatttttagtgtttgaatgagaaccattattttattaagttatgagtgtagtaattagtggtgaaccgtttagtgaccgttgttagcattttaccgtta 998  T
Q  115 agtga 119  Q
    |||||    
T  999 agtga 1003  T

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Target: scaffold0521 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 11838 - 11784
Alignment:
Q  20 ttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  11838 ttttagtgttt-agtgagaaccattattttactaagttactagtgtagtaattagt 11784  T

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Target: scaffold0335 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 5098 - 5164
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| | ||||||||||    
T  5098 gtgagaattatttttaatgttt-agtgagaaccattattttactaagttactagtatagtaattagtt 5164  T

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Target: scaffold0347 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 5042 - 4984
Alignment:
Q  8 tgtgaggattatttttagtg-ttttagcgagaaccatta-ttttactaagttactagtg 64  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  5042 tgtgaggattatttttagtgtttttagcgagaaccattatttttactaagttattagtg 4984  T

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Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 29273 - 29227
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  29273 tttagtgagaaccattattttactaagttactagtgtagtaattagt 29227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 116049 - 116114
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| |||||||||||||||| || ||||||||||||||| ||||||||||||| | |||||||||    
T  116049 gtgagaattatttttagtgttt-agtgagaaccattattttgctaagttactagtttagtaattagt 116114  T

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Target: scaffold0643 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 238 - 174
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||| |||||||||||||||| || ||||||| |||||||||||||||||||| || |||||||||    
T  238 tgagaattatttttagtgttt-agtgagaaccgttattttactaagttactagggtagtaattagt 174  T

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Target: scaffold0507 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 1031 - 1095
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaatta 73  Q
    ||||| |||||||||||||||||||  ||| |||||||||| |||||||||||| || |||||||    
T  1031 gtgagaattatttttagtgttttagtcagagccattattttgctaagttactagggtagtaatta 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 69834 - 69894
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||||||||||||||| |  |||| |||||||||||||||||||| || |||||||||    
T  69834 attatttttagtgttttagtggaaaccgttattttactaagttactagagtagtaattagt 69894  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 3913 - 3847
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || || |||||||||||||||||||||||||| | ||||||||||    
T  3913 gtgagaattatttttaatgttt-agtgacaaccattattttactaagttactagtatagtaattagtt 3847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 5949 - 5883
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||||||||||| || |||||||    
T  5949 gtgagaattatttttaatgttt-agtgagaacccttattttactaagttactagtgtagtgattagtt 5883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 43659 - 43593
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||| ||||| || |||||| |||||||||||||||||||||||| || |||||||    
T  43659 gtgagaattatttttaatgttt-agtgagaactattattttactaagttactagtgtagtgattagtt 43593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1036 - 971
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||||| ||||| |||||||| |||||| |||||||| |||||| |||||||||    
T  1036 gtgagaattatttttagtg-tttagtgagaaccactattttgctaagttattagtgtagtaattagt 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 7419 - 7354
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||| ||||||||||||| ||||| |||||||| |||||| |||||||| |||||| |||||||||    
T  7419 gtgagaattatttttagtg-tttagtgagaaccactattttgctaagttattagtgtagtaattagt 7354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 5331 - 5385
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtg 64  Q
    |||| |||||||||| ||||| || | ||||||||||||||||||||||||||||    
T  5331 tgagtattatttttactgtttaagtgggaaccattattttactaagttactagtg 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 180435 - 180481
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagttgtgag 81  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||    
T  180435 gagaatcattgttttactaagttactagtatggtaattagttgtgag 180481  T

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Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 180549 - 180616
Alignment:
Q  157 cccactaaggcattag-ggttaagcccatttgagaagagcttatataagttctagactttagagaaaa 223  Q
    |||| ||||||||||  ||||||||  |||||||| |||| |||||||||||||| ||||||||||||    
T  180549 cccattaaggcattaaaggttaagcttatttgagaggagcctatataagttctagtctttagagaaaa 180616  T

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Target: scaffold0367 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 16869 - 16910
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  16869 gagaacccttattttactaagttactagtgtggtgattagtt 16910  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 12806 - 12754
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactag 62  Q
    ||||| |||||||||||||||| || ||||||| ||||||||||||||||||||    
T  12806 gtgagaattatttttagtgttt-agtgagaaccgttattttactaagttactag 12754  T

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Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 16653 - 16604
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttac 59  Q
    ||||| |||||||||||||||| || ||||||| |||||||||||||||||    
T  16653 gtgagaattatttttagtgttt-agtgagaacctttattttactaagttac 16604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 26184 - 26135
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttac 59  Q
    ||||| |||||||||||||||| || ||||||| |||||||||||||||||    
T  26184 gtgagaattatttttagtgttt-agtgagaaccgttattttactaagttac 26135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 1808 - 1860
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttacta 61  Q
    ||||| ||||||||||| ||||||| ||||||| ||||||| |||||||||||    
T  1808 gtgagaattatttttagggttttagtgagaaccgttattttgctaagttacta 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 183
Target Start/End: Original strand, 12329 - 12428
Alignment:
Q  88 agtgatcgttgttagtatttta--cgttaagtgagtaaaaacattttataatt-gtgaatgagtgaattgatcccactaaggcatt-agggttaagccca 183  Q
    |||||||||| ||| ||||||   ||||||||||||| |||||||||  |||| || |||||||||||||| |||| |||| |||| |||||||||||||    
T  12329 agtgatcgttattattatttttaccgttaagtgagtagaaacatttttgaattggttaatgagtgaattgagcccattaagacattaagggttaagccca 12428  T

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Target: scaffold0231; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 12243 - 12298
Alignment:
Q  10 tgaggattatttttagtgttttagc-gagaaccattattttactaagttactagtg 64  Q
    ||||||||||||||||||||| ||  |||||||||| |||||||||||| ||||||    
T  12243 tgaggattatttttagtgtttcaggtgagaaccattgttttactaagttgctagtg 12298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 49375 - 49430
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| |||||||||| ||||| || || ||||||||||||||||||||||||||||    
T  49375 gtgagaattatttttaatgttt-agtgaaaaccattattttactaagttactagtgt 49430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 80292 - 80225
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagttg 77  Q
    |||| ||||||||||||||| | || |||||||||||||||||||||||||| || | || ||||||||    
T  80292 gtgatgattatttttagtgtat-agtgagaaccattattttactaagttactggtatagtgattagttg 80225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 131278 - 131231
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  131278 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 131231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 4107 - 4060
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  4107 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 4060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 5751 - 5798
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  5751 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 5798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 9050 - 9097
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  9050 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 9097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 8695 - 8648
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  8695 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 8648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 4422 - 4375
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  4422 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 4375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 22932 - 22885
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||||||||| |||||||||||||||||||| || || |||||||    
T  22932 tttagcgagaacccttattttactaagttactagggtagtgattagtt 22885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 519 - 566
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  519 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34316 - 34370
Alignment:
Q  16 ttatttttagtgttttagcgagaaccattatt--ttactaagttactagtgtggt 68  Q
    |||||||||||| || || |||||||||||||  |||||||||||||||||||||    
T  34316 ttatttttagtgcttaagtgagaaccattattatttactaagttactagtgtggt 34370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 108440 - 108393
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  108440 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 60742 - 60808
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| |||||||||||| ||| || || |||| ||||||||||||||||||||||| || |||||||    
T  60742 gtgagaattatttttagtattt-agtgacaacccttattttactaagttactagtgtagtgattagtt 60808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 358 - 404
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  358 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 153569 - 153609
Alignment:
Q  36 agaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  153569 agaacccttattttactaagttactagtgtagtgattagtt 153609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 164536 - 164583
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  164536 tttagtgagaacccttattttactaagttactagtgtagtgattagtt 164583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 9629 - 9675
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  9629 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 9675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 8912 - 8958
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  8912 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 8958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 15810 - 15856
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  15810 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 15856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 29888 - 29842
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  29888 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 29842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 7294 - 7248
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  7294 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 7248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 6621 - 6711
Alignment:
Q  88 agtgatcgttgttagtatttta-cgttaagtgagtaaaaacattttataattgtgaatgagtgaattgatcccactaaggcattagggtta 177  Q
    |||||||||| ||||||||||| ||||||| | ||| |||||||||| |||||||  ||||||  || |  ||||||||| ||||||||||    
T  6621 agtgatcgttattagtattttaccgttaagagtgtagaaacattttagaattgtggttgagtgggttaagtccactaaggtattagggtta 6711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 11629 - 11564
Alignment:
Q  9 gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||||||||||||| ||||| || ||| |||||||||||||||||||| ||  || |||||||||    
T  11629 gtgaggattatttttaatgttt-agtgagtaccattattttactaagttaataaggtagtaattagt 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 2691 - 2645
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  2691 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 2645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 43687 - 43641
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  43687 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 43641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 7907 - 7861
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||||    
T  7907 ttagtgagaacccttattttactaagttactagtgtagtgattagtt 7861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 6422 - 6358
Alignment:
Q  10 tgaggattatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    ||||||| ||||||||||||| || | |||  ||||||||||||||||||||| || |||||||||    
T  6422 tgaggatcatttttagtgttt-agtgggaaatattattttactaagttactagagtagtaattagt 6358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 4003 - 4044
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  4003 gagaacccttattttactaagttactagtgtagtgattagtt 4044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 23313 - 23354
Alignment:
Q  35 gagaaccattattttactaagttactagtgtggtaattagtt 76  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  23313 gagaacccttattttactaagttactagtgtagtgattagtt 23354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 1070 - 1106
Alignment:
Q  29 tttagcgagaaccattattttactaagttactagtgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  1070 tttagtgagaacccttattttactaagttactagtgt 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0850
Description:

Target: scaffold0850; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 5124 - 5168
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  5124 ttagtgagaacctttattttactaagttactagtgtagtgattag 5168  T

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Target: scaffold0480 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 8410 - 8469
Alignment:
Q  15 attatttttagtgttttagcgagaaccattattttactaagttactagtgtggtaattagt 75  Q
    |||||||||||||||| || ||||| | ||||||||||||||||||||  | |||||||||    
T  8410 attatttttagtgttt-agagagaatcgttattttactaagttactagaatagtaattagt 8469  T

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Target: scaffold0257 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 6049 - 6005
Alignment:
Q  30 ttagcgagaaccattattttactaagttactagtgtggtaattag 74  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||    
T  6049 ttagtgagaacctttattttactaagttactagtgtagtgattag 6005  T

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Target: scaffold0218 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 27002 - 26939
Alignment:
Q  17 tatttttagtgtttta-gcgagaaccattattttactaagttactagtgtggtaattagttgtga 80  Q
    |||||||||||||| | | ||||| |||||||| ||||||||||||||||| ||| |||||||||    
T  27002 tatttttagtgtttcaagtgagaatcattattt-actaagttactagtgtgataaatagttgtga 26939  T

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