View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3537_high_56 (Length: 239)
Name: NF3537_high_56
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3537_high_56 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25897490 - 25897270
Alignment:
| Q |
1 |
cctcctctctaacacgtagagaggctgcagcagttaaaccttctggccatgtcaacctttccaaatactcacatttcatcaactatcctttcaccacaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25897490 |
cctcctctctaacacgtagagaggctgcagcagttaaaccttctggccatgtcaacctttccaaatactcacatttcatcaactatcctttcaccacaac |
25897391 |
T |
|
| Q |
101 |
accttgcaagaacagaatccgtagcaatatcataagggctcaagtttcaggtgataaaccatgtttcttttcaaaccattttcttcttattttagtgtgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25897390 |
accttgcaagaacagaatccgtagcaatatcataagggctcaagtttcaggtgataaaccatgtttcttttcaaaccattttcttcttattttagtgtgt |
25897291 |
T |
|
| Q |
201 |
gtgaatgttaaacatgtatgt |
221 |
Q |
| |
|
||||||||||||||||||||| |
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|
| T |
25897290 |
gtgaatgttaaacatgtatgt |
25897270 |
T |
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