View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3537_high_62 (Length: 226)
Name: NF3537_high_62
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3537_high_62 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 42472038 - 42471834
Alignment:
| Q |
7 |
gaatgtttgtgtttaagagtgtgttcctagcattattctttggaataaacactaattttgtgttgtatggttccaaacagtttatgtcaaccaaattaca |
106 |
Q |
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| T |
42472038 |
gaatgtttgtgtttaagagtgtgttcctagcattattctttggaataaacactaattttgtgttgtatggttccaaacagtttatgtcaaccaaattaca |
42471939 |
T |
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| Q |
107 |
tgtgaagtttgatagaagcttggaggtgaagagcacgccaccaacagttacgcgtgttcatggattgataaactgtttgttgatactaactagtccatca |
206 |
Q |
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| T |
42471938 |
tgtgaagtttgatagaagcttggaggtgaagagcacgccaccaacagttacgcgtgttcatggattgataaactgtttgttgatactaactagtccatca |
42471839 |
T |
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| Q |
207 |
agtgt |
211 |
Q |
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||||| |
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| T |
42471838 |
agtgt |
42471834 |
T |
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