View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3537_low_31 (Length: 335)
Name: NF3537_low_31
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3537_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 11752624 - 11752299
Alignment:
| Q |
1 |
acctaaggtggtctatgtatcacttctctatttataatacggagaccaaatctgataatggtgaaaatatgaagaccaaaactgcatttaagccaaactt |
100 |
Q |
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| T |
11752624 |
acctaaggtggtctatgtatcgcttctctatttataatagggagaccaaatctgataatggtgaaaatatgaagaccaaaactgcatttaagccaaagtt |
11752525 |
T |
|
| Q |
101 |
aaaatagcttatggttatctcataagttaattctaacaaattacttatgctcatagataagttccaatagttcaatctaaatgtctcataagtatttaat |
200 |
Q |
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| T |
11752524 |
aaaatagcttatagtcatgtcataagttatttctaacaaattacttatgctcatagataagttccaatagttcaatctaaatgtctcataagtatttaat |
11752425 |
T |
|
| Q |
201 |
tttcagcttacatagtatcaaaaagttgta---------aaaacagtttacctataaaatcaagaatgacacgaccatcactgtctctaccaaaaggttt |
291 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11752424 |
tttcagcttacatagtatcaaaaagttgtaaaaaaaaaaaaaacagtttacctataaaatcaagaatgacacgaccatcactgtctctaccaaaaggttt |
11752325 |
T |
|
| Q |
292 |
gtggaaaaagccttgaccatatggtg |
317 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
11752324 |
gtggaaaaagccttgaccatatggtg |
11752299 |
T |
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