View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3537_low_5 (Length: 631)

Name: NF3537_low_5
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3537_low_5
NF3537_low_5
[»] chr8 (29 HSPs)
chr8 (122-448)||(8759728-8760055)
chr8 (452-623)||(19176659-19176830)
chr8 (452-623)||(9930026-9930197)
chr8 (452-623)||(12571868-12572040)
chr8 (452-620)||(41681139-41681306)
chr8 (452-623)||(13224646-13224816)
chr8 (452-623)||(33328163-33328334)
chr8 (452-621)||(11656460-11656630)
chr8 (456-623)||(44831614-44831781)
chr8 (452-623)||(31133225-31133396)
chr8 (452-623)||(9178005-9178175)
chr8 (452-596)||(13225034-13225179)
chr8 (452-607)||(44831252-44831408)
chr8 (452-596)||(19176295-19176440)
chr8 (500-621)||(33743290-33743411)
chr8 (452-607)||(11656841-11656997)
chr8 (452-607)||(41681518-41681674)
chr8 (452-596)||(9928914-9929059)
chr8 (452-596)||(12572246-12572391)
chr8 (452-607)||(33742927-33743082)
chr8 (452-605)||(34540934-34541088)
chr8 (452-573)||(31133639-31133760)
chr8 (452-623)||(4630161-4630326)
chr8 (452-596)||(33328535-33328680)
chr8 (452-555)||(11336959-11337062)
chr8 (468-573)||(4629818-4629923)
chr8 (452-585)||(10918131-10918264)
chr8 (458-588)||(8073956-8074085)
chr8 (526-588)||(43958264-43958326)
[»] scaffold0295 (2 HSPs)
scaffold0295 (452-623)||(4798-4969)
scaffold0295 (452-561)||(5222-5331)
[»] chr7 (27 HSPs)
chr7 (452-623)||(19830425-19830596)
chr7 (452-623)||(19590530-19590701)
chr7 (452-623)||(37786772-37786943)
chr7 (452-621)||(35289272-35289441)
chr7 (452-623)||(29100220-29100391)
chr7 (452-621)||(2659211-2659380)
chr7 (452-621)||(32004985-32005154)
chr7 (452-623)||(4641445-4641616)
chr7 (456-623)||(38858652-38858819)
chr7 (452-621)||(34534162-34534331)
chr7 (453-616)||(23953105-23953268)
chr7 (455-616)||(4478076-4478237)
chr7 (452-607)||(19590909-19591065)
chr7 (452-607)||(38859025-38859181)
chr7 (452-596)||(2658844-2658989)
chr7 (452-606)||(32004619-32004774)
chr7 (463-573)||(29099866-29099976)
chr7 (452-605)||(37787153-37787307)
chr7 (452-596)||(34533796-34533941)
chr7 (452-589)||(38160956-38161093)
chr7 (452-563)||(35288908-35289019)
chr7 (452-607)||(23952735-23952892)
chr7 (452-585)||(28583444-28583577)
chr7 (452-588)||(28584326-28584462)
chr7 (452-607)||(19830804-19830959)
chr7 (452-607)||(4641828-4641981)
chr7 (535-623)||(35579256-35579344)
[»] chr5 (45 HSPs)
chr5 (452-623)||(18183338-18183509)
chr5 (452-623)||(2865124-2865295)
chr5 (452-623)||(5819298-5819469)
chr5 (452-623)||(8647443-8647614)
chr5 (452-623)||(19359141-19359312)
chr5 (452-623)||(15708976-15709146)
chr5 (452-623)||(24362205-24362376)
chr5 (452-623)||(8460935-8461106)
chr5 (452-623)||(29455111-29455282)
chr5 (466-623)||(164560-164717)
chr5 (452-619)||(14215616-14215783)
chr5 (452-623)||(15372242-15372413)
chr5 (453-607)||(24361843-24361997)
chr5 (452-607)||(18182975-18183131)
chr5 (453-607)||(24325218-24325372)
chr5 (452-607)||(5818934-5819090)
chr5 (452-612)||(14463901-14464060)
chr5 (452-573)||(19359555-19359676)
chr5 (452-607)||(8647822-8647978)
chr5 (452-607)||(2864759-2864915)
chr5 (452-623)||(16018594-16018763)
chr5 (463-623)||(24331929-24332092)
chr5 (469-623)||(25000112-25000266)
chr5 (452-596)||(8461326-8461471)
chr5 (452-607)||(14215246-14215402)
chr5 (452-607)||(29454745-29454901)
chr5 (452-609)||(25000471-25000629)
chr5 (452-596)||(164196-164340)
chr5 (452-589)||(7349420-7349557)
chr5 (452-607)||(24331564-24331722)
chr5 (452-609)||(16018969-16019127)
chr5 (452-567)||(4222147-4222262)
chr5 (452-606)||(15371876-15372030)
chr5 (453-585)||(6019177-6019309)
chr5 (452-573)||(7348564-7348685)
chr5 (452-607)||(15709353-15709508)
chr5 (452-587)||(4623153-4623286)
chr5 (452-585)||(4219668-4219800)
chr5 (465-586)||(4624631-4624752)
chr5 (452-586)||(6018319-6018452)
chr5 (500-589)||(13814131-13814224)
chr5 (529-573)||(14462686-14462730)
chr5 (123-171)||(31152010-31152057)
chr5 (577-623)||(16752711-16752757)
chr5 (546-623)||(28495211-28495288)
[»] chr6 (37 HSPs)
chr6 (452-623)||(10900299-10900470)
chr6 (452-623)||(15828010-15828181)
chr6 (452-623)||(20741105-20741276)
chr6 (452-623)||(11276951-11277122)
chr6 (452-623)||(18257142-18257313)
chr6 (452-607)||(2319677-2319832)
chr6 (452-623)||(31470685-31470856)
chr6 (452-621)||(1149802-1149972)
chr6 (452-621)||(12935528-12935697)
chr6 (452-623)||(11444992-11445163)
chr6 (452-623)||(28472642-28472812)
chr6 (452-623)||(29859831-29860001)
chr6 (452-623)||(2322588-2322758)
chr6 (452-616)||(10899944-10900109)
chr6 (452-623)||(18505288-18505459)
chr6 (452-607)||(12935162-12935318)
chr6 (452-623)||(23074004-23074164)
chr6 (452-607)||(23075512-23075668)
chr6 (452-610)||(4811377-4811535)
chr6 (452-607)||(11445371-11445527)
chr6 (452-607)||(22219737-22219893)
chr6 (452-573)||(18504924-18505045)
chr6 (452-596)||(31470320-31470465)
chr6 (452-564)||(18257565-18257677)
chr6 (452-596)||(20741496-20741644)
chr6 (452-589)||(29033439-29033577)
chr6 (452-616)||(11276595-11276760)
chr6 (452-589)||(29035040-29035177)
chr6 (452-583)||(3835135-3835266)
chr6 (465-588)||(18296163-18296285)
chr6 (452-573)||(15827643-15827766)
chr6 (452-573)||(4811675-4811796)
chr6 (452-535)||(1149470-1149553)
chr6 (123-174)||(2911250-2911301)
chr6 (540-622)||(35163557-35163639)
chr6 (484-589)||(835431-835535)
chr6 (583-623)||(32836367-32836407)
[»] chr1 (39 HSPs)
chr1 (452-623)||(18984124-18984295)
chr1 (452-623)||(50970647-50970818)
chr1 (452-623)||(29869625-29869796)
chr1 (452-616)||(5540194-5540358)
chr1 (452-616)||(29306958-29307122)
chr1 (452-623)||(5962947-5963118)
chr1 (452-623)||(15173101-15173272)
chr1 (452-623)||(33144288-33144459)
chr1 (452-616)||(15646571-15646735)
chr1 (452-623)||(9018978-9019149)
chr1 (452-623)||(21856412-21856583)
chr1 (452-621)||(26859431-26859599)
chr1 (452-623)||(8678911-8679081)
chr1 (452-623)||(17433221-17433392)
chr1 (452-623)||(39154024-39154195)
chr1 (452-616)||(29307317-29307482)
chr1 (452-609)||(17433597-17433755)
chr1 (452-564)||(8678546-8678658)
chr1 (452-607)||(26859064-26859220)
chr1 (452-605)||(50970283-50970437)
chr1 (452-596)||(4636366-4636511)
chr1 (452-573)||(5539821-5539942)
chr1 (452-616)||(9019338-9019503)
chr1 (452-573)||(18984538-18984659)
chr1 (452-573)||(29870038-29870159)
chr1 (455-607)||(33143925-33144078)
chr1 (452-607)||(21856047-21856203)
chr1 (452-573)||(39154439-39154560)
chr1 (452-607)||(15173478-15173633)
chr1 (452-564)||(15646197-15646309)
chr1 (452-587)||(52268295-52268430)
chr1 (507-621)||(4636033-4636146)
chr1 (452-573)||(5962583-5962704)
chr1 (452-563)||(52269177-52269288)
chr1 (452-607)||(17112287-17112442)
chr1 (472-547)||(47827033-47827108)
chr1 (452-533)||(2733416-2733497)
chr1 (452-522)||(47826969-47827039)
chr1 (546-623)||(9833522-9833599)
[»] chr2 (37 HSPs)
chr2 (452-621)||(11090526-11090695)
chr2 (452-623)||(22374325-22374496)
chr2 (452-623)||(40027145-40027316)
chr2 (452-623)||(40815714-40815885)
chr2 (452-621)||(28616618-28616788)
chr2 (452-623)||(239358-239528)
chr2 (452-620)||(14432147-14432315)
chr2 (452-623)||(18451200-18451371)
chr2 (452-623)||(26538102-26538273)
chr2 (452-623)||(1978113-1978284)
chr2 (452-623)||(43058338-43058509)
chr2 (453-623)||(3025472-3025641)
chr2 (452-616)||(26538454-26538619)
chr2 (452-616)||(8425736-8425900)
chr2 (452-588)||(20444754-20444890)
chr2 (452-607)||(40815350-40815506)
chr2 (452-573)||(22374744-22374865)
chr2 (452-588)||(35781067-35781203)
chr2 (452-596)||(7446347-7446490)
chr2 (452-607)||(7446730-7446886)
chr2 (452-607)||(18450835-18450991)
chr2 (452-573)||(40027559-40027680)
chr2 (452-588)||(20440436-20440571)
chr2 (452-607)||(28616998-28617154)
chr2 (452-588)||(35779713-35779849)
chr2 (452-562)||(11090950-11091060)
chr2 (454-596)||(239747-239890)
chr2 (452-573)||(1978528-1978649)
chr2 (438-564)||(28847123-28847251)
chr2 (452-596)||(43058728-43058872)
chr2 (452-588)||(8972242-8972378)
chr2 (452-589)||(15551504-15551641)
chr2 (452-606)||(8425360-8425514)
chr2 (463-606)||(3025848-3025991)
chr2 (452-607)||(14432525-14432681)
chr2 (452-587)||(15552459-15552593)
chr2 (452-623)||(28143400-28143570)
[»] chr3 (60 HSPs)
chr3 (452-623)||(5136985-5137156)
chr3 (452-623)||(23644467-23644638)
chr3 (452-623)||(39555946-39556117)
chr3 (452-623)||(41046705-41046876)
chr3 (452-623)||(31779021-31779192)
chr3 (452-623)||(25853596-25853767)
chr3 (452-621)||(20840565-20840734)
chr3 (452-623)||(24300925-24301096)
chr3 (452-623)||(37726934-37727105)
chr3 (452-616)||(43973446-43973610)
chr3 (452-623)||(22425182-22425353)
chr3 (452-621)||(32535330-32535503)
chr3 (452-623)||(27393946-27394117)
chr3 (453-596)||(48452995-48453138)
chr3 (452-623)||(30104487-30104657)
chr3 (452-623)||(17464860-17465032)
chr3 (452-623)||(26837725-26837895)
chr3 (471-623)||(26274936-26275087)
chr3 (452-607)||(25853239-25853395)
chr3 (452-607)||(37727314-37727470)
chr3 (452-607)||(43973824-43973980)
chr3 (452-596)||(4275759-4275904)
chr3 (452-596)||(20840956-20841101)
chr3 (452-588)||(25612381-25612517)
chr3 (452-607)||(27393666-27393822)
chr3 (452-607)||(39555583-39555739)
chr3 (452-573)||(17464496-17464617)
chr3 (452-573)||(30098182-30098303)
chr3 (452-607)||(31778658-31778814)
chr3 (452-609)||(29801798-29801956)
chr3 (452-573)||(32534964-32535085)
chr3 (452-607)||(5137365-5137521)
chr3 (452-568)||(29801361-29801477)
chr3 (452-586)||(23228414-23228547)
chr3 (452-573)||(23644884-23645005)
chr3 (452-589)||(50116812-50116949)
chr3 (452-607)||(22424819-22424975)
chr3 (452-607)||(26837365-26837521)
chr3 (452-573)||(26274572-26274693)
chr3 (463-587)||(32697106-32697229)
chr3 (452-588)||(51474737-51474874)
chr3 (472-596)||(41047094-41047218)
chr3 (468-607)||(24300577-24300717)
chr3 (452-588)||(37220562-37220698)
chr3 (452-591)||(25420542-25420681)
chr3 (452-585)||(45965943-45966076)
chr3 (452-561)||(51473433-51473542)
chr3 (466-575)||(18010162-18010271)
chr3 (453-588)||(25419150-25419285)
chr3 (452-533)||(37222030-37222111)
chr3 (510-589)||(23227319-23227398)
chr3 (452-574)||(32695708-32695830)
chr3 (122-175)||(3469132-3469185)
chr3 (452-624)||(49407801-49407972)
chr3 (552-623)||(55192222-55192293)
chr3 (563-623)||(29801532-29801592)
chr3 (540-623)||(37075781-37075864)
chr3 (583-617)||(33412383-33412417)
chr3 (583-623)||(27199838-27199878)
chr3 (535-623)||(27200062-27200150)
[»] chr4 (61 HSPs)
chr4 (452-623)||(11153516-11153687)
chr4 (452-623)||(12234334-12234505)
chr4 (452-623)||(33109689-33109860)
chr4 (452-623)||(46193774-46193945)
chr4 (452-617)||(25447611-25447776)
chr4 (452-623)||(15523603-15523774)
chr4 (452-623)||(25937675-25937846)
chr4 (452-616)||(38962195-38962359)
chr4 (452-623)||(2118665-2118835)
chr4 (452-623)||(4219562-4219733)
chr4 (452-623)||(22434547-22434716)
chr4 (452-623)||(23494448-23494619)
chr4 (452-623)||(54995437-54995607)
chr4 (452-623)||(22170306-22170476)
chr4 (452-623)||(48526201-48526371)
chr4 (452-623)||(51020802-51020973)
chr4 (452-623)||(45082437-45082606)
chr4 (452-609)||(46193410-46193568)
chr4 (452-596)||(25447252-25447397)
chr4 (452-607)||(22434184-22434340)
chr4 (452-607)||(45082808-45082964)
chr4 (452-563)||(23494872-23494983)
chr4 (452-607)||(4219943-4220099)
chr4 (452-607)||(20470895-20471051)
chr4 (452-607)||(48526565-48526721)
chr4 (452-606)||(15523240-15523395)
chr4 (452-573)||(12234748-12234869)
chr4 (452-573)||(54995074-54995195)
chr4 (515-623)||(12503805-12503913)
chr4 (452-573)||(18751604-18751725)
chr4 (452-573)||(25938090-25938211)
chr4 (452-573)||(33109883-33110004)
chr4 (452-607)||(11153151-11153307)
chr4 (465-588)||(43243685-43243807)
chr4 (452-573)||(2118298-2118419)
chr4 (452-561)||(18763951-18764060)
chr4 (452-589)||(20958264-20958399)
chr4 (452-596)||(51021191-51021335)
chr4 (463-588)||(44892552-44892677)
chr4 (468-589)||(48713749-48713870)
chr4 (465-585)||(43281198-43281317)
chr4 (464-607)||(12503453-12503597)
chr4 (452-588)||(48293599-48293735)
chr4 (452-588)||(48294946-48295083)
chr4 (452-583)||(16690941-16691072)
chr4 (454-585)||(20957196-20957327)
chr4 (452-564)||(35363028-35363141)
chr4 (452-588)||(44890522-44890658)
chr4 (452-583)||(48708300-48708431)
chr4 (452-573)||(10258306-10258427)
chr4 (505-588)||(43242328-43242411)
chr4 (18-78)||(2703245-2703305)
chr4 (452-583)||(16691481-16691611)
chr4 (556-623)||(18751971-18752038)
chr4 (452-517)||(16318251-16318316)
chr4 (508-588)||(44220781-44220861)
chr4 (466-555)||(55189547-55189636)
chr4 (535-623)||(17504061-17504149)
chr4 (583-623)||(17504329-17504369)
chr4 (453-588)||(30597925-30598059)
chr4 (583-623)||(35193443-35193483)
[»] scaffold0951 (2 HSPs)
scaffold0951 (452-621)||(1672-1841)
scaffold0951 (452-607)||(2051-2207)
[»] scaffold0273 (2 HSPs)
scaffold0273 (452-623)||(4576-4747)
scaffold0273 (486-607)||(4242-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (452-623)||(134042-134213)
[»] scaffold1223 (2 HSPs)
scaffold1223 (452-623)||(758-928)
scaffold1223 (452-573)||(1160-1281)
[»] scaffold0007 (3 HSPs)
scaffold0007 (452-623)||(64307-64478)
scaffold0007 (452-562)||(64735-64845)
scaffold0007 (452-623)||(205738-205908)
[»] scaffold0432 (2 HSPs)
scaffold0432 (452-623)||(10242-10412)
scaffold0432 (452-554)||(9937-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (466-623)||(10640-10797)
scaffold0417 (452-573)||(11042-11163)
[»] scaffold0176 (2 HSPs)
scaffold0176 (453-614)||(18841-19001)
scaffold0176 (452-544)||(19069-19161)
[»] scaffold0027 (2 HSPs)
scaffold0027 (452-623)||(42528-42698)
scaffold0027 (452-616)||(42174-42339)
[»] scaffold0113 (1 HSPs)
scaffold0113 (452-573)||(28662-28783)
[»] scaffold0157 (2 HSPs)
scaffold0157 (515-623)||(16564-16672)
scaffold0157 (464-607)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (452-589)||(572-709)
[»] scaffold0057 (2 HSPs)
scaffold0057 (452-588)||(61862-61998)
scaffold0057 (455-521)||(61036-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (463-588)||(465-589)
[»] scaffold0168 (1 HSPs)
scaffold0168 (502-589)||(7691-7778)
[»] scaffold0076 (1 HSPs)
scaffold0076 (452-550)||(8451-8549)


Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-107; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 122 - 448
Target Start/End: Complemental strand, 8760055 - 8759728
Alignment:
Q  122 caaatgtagtgagggtccaggcccacaaggagctatatgtgggtccgtccctgcccatttgagttggcttgatggtattgattaggatttggggatatgc 221  Q
    ||||||||||||||||||||||| |||||||||||||||||   |||| ||||||||||||  |||| ||| |||||||| ||| || ||||| ||| ||    
T  8760055 caaatgtagtgagggtccaggcc-acaaggagctatatgtgtacccgttcctgcccatttggattggtttggtggtattggttaagacttgggaatacgc 8759957  T
Q  222 ttcttctcaaggtttaagatttgattaaaccttgatgtcaatataggtgggttaatctaatttcttnnnnnnnn--caacatttgataagcacataaaaa 319  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| |||||           ||||||||||||||||||||||||    
T  8759956 ttcttctcaaggtctaagattcgattaaaccctgatgtcaatataggtgggttaatctagtttctaaaaaaaaaaacaacatttgataagcacataaaaa 8759857  T
Q  320 tacgtctaaattaaatctcacatccaagaatgcactaatatcatttgtcaaaaaattaaaacagaatgcacaaatacttgtttttaagcggaagaaggta 419  Q
    | |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8759856 ttcgtctacattaaatctcacattcaagaatgcactaatatcatttgtcaaaaaattaaaacagaatgcactaatacttgtttttaagcggaagaaggta 8759757  T
Q  420 ctaatgttggagagcaacattagaatata 448  Q
    |||||||||||||||||||||||||||||    
T  8759756 ctaatgttggagagcaacattagaatata 8759728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 19176830 - 19176659
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176830 aattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 19176731  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||||    
T  19176730 ttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 9930197 - 9930026
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  9930197 aattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgcat 9930098  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  9930097 ttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 12571868 - 12572040
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12571868 aattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 12571967  T
Q  552 ttttcgtcct-accccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  12571968 ttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 452 - 620
Target Start/End: Original strand, 41681139 - 41681306
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681139 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 41681238  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctat 620  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||    
T  41681239 ttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 13224646 - 13224816
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||    
T  13224646 aattacacttttggtcttcgtgttttggcctactcacgaaactggtct-gcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaat 13224744  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13224745 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 33328163 - 33328334
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33328163 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat 33328262  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||| | ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  33328263 ttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 452 - 621
Target Start/End: Original strand, 11656460 - 11656630
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  11656460 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgcat 11656559  T
Q  552 ttttcgtcctaccccccattttattctcc-aaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||| ||||    
T  11656560 ttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 456 - 623
Target Start/End: Complemental strand, 44831781 - 44831614
Alignment:
Q  456 acacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttt 555  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  44831781 acacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgcattttt 44831682  T
Q  556 cgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
     |||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  44831681 ggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 31133225 - 31133396
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  31133225 aattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgcat 31133324  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| | ||||||    
T  31133325 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 9178175 - 9178005
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9178175 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat 9178076  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| || || |||||||||||||||| |||||||||||||||| | | ||||||||||||| ||||||||    
T  9178075 ttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 13225179 - 13225034
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13225179 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 13225080  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  13225079 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 13225034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 44831252 - 44831408
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44831252 aattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgcat 44831351  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  44831352 ttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 19176295 - 19176440
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176295 aattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 19176394  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||| ||| || ||||| |  ||||| ||||||||||||||    
T  19176395 ttttcgtccgacctcctattttcaaactccagaaacgcagagaaat 19176440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 500 - 621
Target Start/End: Complemental strand, 33743411 - 33743290
Alignment:
Q  500 tgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataat 599  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataac 33743312  T
Q  600 agttttagacctaccccctatg 621  Q
    |||||||||||||| |||||||    
T  33743311 agttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 11656997 - 11656841
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11656997 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 11656898  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||||  ||||||||    
T  11656897 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 41681674 - 41681518
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681674 aattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 41681575  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||||||||  | ||||| |  ||||| ||||||||||||||  |||||||||    
T  41681574 ttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttag 41681518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 9928914 - 9929059
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928914 aattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 9929013  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| ||  |||| |  ||||| ||||||||||||||    
T  9929014 ttttcgtcctacctccttttttcaaactccagaaacgcagagaaat 9929059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 12572391 - 12572246
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12572391 aattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 12572292  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  12572291 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 12572246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 33742927 - 33743082
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  33742927 aattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttgatgcat 33743025  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| || | ||| |||||||||||||| | ||||||||    
T  33743026 ttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 605
Target Start/End: Complemental strand, 34541088 - 34540934
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  34541088 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgcat 34540989  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttt 605  Q
    ||||||||||||| || ||||| |  ||  | |||||||||||||| ||||||||    
T  34540988 ttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 31133760 - 31133639
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31133760 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgcat 31133661  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    |||||||| |||| || |||||    
T  31133660 ttttcgtcatacctcctatttt 31133639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 4630326 - 4630161
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || || ||||||||||| |||||||||||| ||||| |||  ||||||||||||| | |||||||||||||||||      ||||||||    
T  4630326 aattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgcat 4630233  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  4630232 ttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 33328680 - 33328535
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| ||||||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33328680 aattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgcat 33328581  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||| ||| |||||||| |  ||||| ||||||||||||||    
T  33328580 ttttcgtcccacctcccattttcaaactccagaaacgcagagaaat 33328535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 555
Target Start/End: Complemental strand, 11337062 - 11336959
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||| ||||||||||| |||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  11337062 aattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttgcat 11336963  T
Q  552 tttt 555  Q
    ||||    
T  11336962 tttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 573
Target Start/End: Original strand, 4629818 - 4629923
Alignment:
Q  468 ctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccc 567  Q
    ||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||| ||    
T  4629818 ctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgcatttttcgtcttacctcc 4629917  T
Q  568 catttt 573  Q
     |||||    
T  4629918 tatttt 4629923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 452 - 585
Target Start/End: Original strand, 10918131 - 10918264
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || | ||||||||||||||  |||||||||||| ||||||||||   |||||||||| |||||  ||||||||| |||||||||||||||||    
T  10918131 aattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgcat 10918230  T
Q  552 ttttcgtcctaccccccattttattctccaaaaa 585  Q
    ||||| || ||||||||||||||| |||||||||    
T  10918231 ttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 8074085 - 8073956
Alignment:
Q  458 acttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcg 557  Q
    |||| ||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||| |||||||||||||| ||    
T  8074085 acttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgttgcattttacg 8073987  T
Q  558 tcctaccccccattttattctccaaaaacgc 588  Q
    ||  | |||||||||||  ||||||||||||    
T  8073986 tcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  526 tccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 160; Significance: 6e-85; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 4798 - 4969
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4798 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 4897  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4898 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 561
Target Start/End: Complemental strand, 5331 - 5222
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  5331 aattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgcat 5232  T
Q  552 ttttcgtcct 561  Q
    ||||||||||    
T  5231 ttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 6e-85; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 19830425 - 19830596
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830425 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 19830524  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  19830525 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 19590530 - 19590701
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590530 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 19590629  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  19590630 ttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 37786772 - 37786943
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37786772 aattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcat 37786871  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  37786872 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 35289441 - 35289272
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35289441 aattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgcat 35289342  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35289341 ttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 29100391 - 29100220
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29100391 aattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcat 29100292  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29100291 tttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 2659380 - 2659211
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2659380 aattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 2659281  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  2659280 ttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 32005154 - 32004985
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  32005154 aattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgcat 32005055  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  32005054 ttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 4641445 - 4641616
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  4641445 aattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgcat 4641544  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||    
T  4641545 ttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 456 - 623
Target Start/End: Original strand, 38858652 - 38858819
Alignment:
Q  456 acacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttt 555  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38858652 acacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgcattttt 38858751  T
Q  556 cgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
     |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  38858752 ggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 34534331 - 34534162
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| |||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34534331 aattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 34534232  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||||||| ||||||    
T  34534231 ttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 453 - 616
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 552  Q
    |||||| || ||||||||||||||||  ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  553 tttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 455 - 616
Target Start/End: Complemental strand, 4478237 - 4478076
Alignment:
Q  455 tacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttt 554  Q
    ||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  ||||||||||||||||||||||||||||||    
T  4478237 tacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgcatttt 4478138  T
Q  555 tcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4478137 tcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 19591065 - 19590909
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591065 aattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 19590966  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  19590965 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 38859181 - 38859025
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38859181 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgcat 38859082  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  38859081 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 2658844 - 2658989
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  2658844 aattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcat 2658943  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    |||||||| |||| || ||||| |  ||||||||||||||||||||    
T  2658944 ttttcgtcatacctcctattttcaaactccaaaaacgcagagaaat 2658989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 452 - 606
Target Start/End: Original strand, 32004619 - 32004774
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32004619 aattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 32004718  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttta 606  Q
    |||||| |||||| || ||||| |  ||||| |||||||||||||| | |||||||    
T  32004719 ttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 463 - 573
Target Start/End: Original strand, 29099866 - 29099976
Alignment:
Q  463 tggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta 562  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29099866 tggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta 29099965  T
Q  563 ccccccatttt 573  Q
    || || |||||    
T  29099966 cctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 605
Target Start/End: Complemental strand, 37787307 - 37787153
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  37787307 aattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgcat 37787208  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttt 605  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||    
T  37787207 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 34533796 - 34533941
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||| |||||||||||||||||||||||    
T  34533796 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgcat 34533895  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||| ||||||||| || ||||| |  ||||||||||||||||||||    
T  34533896 tttccgtcctacctcctattttcaaactccaaaaacgcagagaaat 34533941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 38160956 - 38161093
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||| |||||||||||||||||||| |  || |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  38160956 aattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttgcat 38161055  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  38161056 ttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 452 - 563
Target Start/End: Original strand, 35288908 - 35289019
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35288908 aattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 35289007  T
Q  552 ttttcgtcctac 563  Q
    ||||||||||||    
T  35289008 ttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 23952735 - 23952892
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcc-tactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 550  Q
    |||||||||| |||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23952735 aattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgca 23952834  T
Q  551 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||||  | ||||| |  | ||| |||||||||||||| ||||||||||    
T  23952835 tttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 585
Target Start/End: Original strand, 28583444 - 28583577
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||| || | ||||  ||||||||||||||| || ||||| |||||||||||||||||||| ||||||    
T  28583444 aattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgcat 28583543  T
Q  552 ttttcgtcctaccccccattttattctccaaaaa 585  Q
    |||||||||||||||||||||||| |||||||||    
T  28583544 ttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 28584462 - 28584326
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | ||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  28584462 aattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgtat 28584363  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  28584362 ttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 19830959 - 19830804
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  19830959 aattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttgcat 19830860  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||| |||||||| || ||||| |  ||||| |||| ||||||||| | ||||||||    
T  19830859 tttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 4641981 - 4641828
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||   ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4641981 aattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 4641885  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
     |||||||||||  || ||||| |  ||| | |||||||||||||| | ||||||||    
T  4641884 atttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 535 - 623
Target Start/End: Complemental strand, 35579344 - 35579256
Alignment:
Q  535 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||| ||| ||||| |||| ||| |||| || |||||   ||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  35579344 tatcatgttttttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 18183509 - 18183338
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183509 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 18183410  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18183409 ttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 2865295 - 2865124
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2865295 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcat 2865196  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  2865195 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 5819469 - 5819298
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5819469 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 5819370  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  5819369 ttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 8647443 - 8647614
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8647443 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 8647542  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  8647543 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 19359141 - 19359312
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19359141 aattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcat 19359240  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  19359241 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 15708976 - 15709146
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15708976 aattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 15709075  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
     |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15709076 atttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 24362376 - 24362205
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  24362376 aattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgcat 24362277  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || ||||||||||    
T  24362276 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 8460935 - 8461106
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||| ||||| ||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8460935 aattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 8461034  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  8461035 ttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 29455282 - 29455111
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29455282 aattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 29455183  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||| | ||||||    
T  29455182 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 466 - 623
Target Start/End: Complemental strand, 164717 - 164560
Alignment:
Q  466 tcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 565  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  164717 tcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccc 164618  T
Q  566 cccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||    
T  164617 cccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 452 - 619
Target Start/End: Complemental strand, 14215783 - 14215616
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14215783 aattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat 14215684  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccccta 619  Q
    |||||||| || |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  14215683 ttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 15372413 - 15372242
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15372413 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat 15372314  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| || ||||  ||||||||||| ||||||||||||||||||| | ||||||||||||||| | ||||||    
T  15372313 tttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 453 - 607
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 552  Q
    ||||||||| |||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  553 tttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 18182975 - 18183131
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18182975 aattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 18183074  T
Q  552 ttttcgtcctacccccca-ttttattctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || | |||||| | ||| |||||||||||||| | ||||||||    
T  18183075 ttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 453 - 607
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 552  Q
    ||||||||| |||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  553 tttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 5818934 - 5819090
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5818934 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcat 5819033  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||| |||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  5819034 ttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 612
Target Start/End: Complemental strand, 14464060 - 14463901
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | ||||||||||||||||||||||||||||||  | ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  14464060 aattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgcat 14463961  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagaccta 612  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| | |||||||||||||    
T  14463960 ttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 19359676 - 19359555
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19359676 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttggat 19359577  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  19359576 ttttcgtcctacctcctatttt 19359555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 8647978 - 8647822
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647978 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 8647879  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||| ||||  | ||||| |  ||||| |||||||||||||| | ||||||||    
T  8647878 ttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 2864759 - 2864915
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2864759 aattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcat 2864858  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  2864859 ttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 16018594 - 16018763
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| ||||||||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  16018594 aattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttttattgcat 16018692  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||| ||||||| ||||||||||||||||||||||   ||| |||| | ||||||||||||||||||||||||    
T  16018693 tttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 463 - 623
Target Start/End: Complemental strand, 24332092 - 24331929
Alignment:
Q  463 tggtcctcgtgttttggcctactcacgaaactggtcttgccctttt-aaaacagaacaaaacggtccttcaattatcattttt-gttgcattttt-cgtc 559  Q
    ||||| || ||||||||| |||||||||||||| || |||| |||| ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  24332092 tggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttcgtc 24331993  T
Q  560 ctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  24331992 ctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 469 - 623
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  469 tcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacccccc 568  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  569 attttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||| |||||||| | ||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 8461471 - 8461326
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  8461471 aattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgctgcat 8461372  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    |||||||| |||| || ||||| |  ||||| ||||||||||||||    
T  8461371 ttttcgtcatacctcctattttcaaactccagaaacgcagagaaat 8461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 14215246 - 14215402
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  14215246 aattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgcat 14215345  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  14215346 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 29454745 - 29454901
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||| ||||| ||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  29454745 aatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttgctgcat 29454844  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  29454845 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 452 - 609
Target Start/End: Complemental strand, 25000629 - 25000471
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  25000629 aattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttgcat 25000530  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagac 609  Q
    ||||||||| ||| || ||||| |  |||||||||||||||||||| | ||||||||||    
T  25000529 ttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 164196 - 164340
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| |||||||||||    
T  164196 aattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgttgcat 164294  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  164295 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 164340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 589
Target Start/End: Complemental strand, 7349557 - 7349420
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||  ||||||| |||||||||||||||||     
T  7349557 aattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgcac 7349458  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    ||||| |||||||||||||||| | |||||||||||||    
T  7349457 ttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 24331564 - 24331722
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatc--atttttgttgc 549  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  24331564 aattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgttgc 24331663  T
Q  550 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||| ||||| | || ||||| |  ||||| |||||||||||||| | ||||||||    
T  24331664 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 452 - 609
Target Start/End: Complemental strand, 16019127 - 16018969
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||| ||||||||||| ||||| ||| ||||||||| |||| |||| ||| ||||||||||||||||||||| ||    
T  16019127 aattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgtat 16019028  T
Q  552 ttttcgtcctacccccca-ttttattctccaaaaacgcagagaaataatagttttagac 609  Q
    ||||||||||||| || | |||||  ||||| |||||||||||||| | ||||||||||    
T  16019027 ttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 4222262 - 4222147
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||| ||||||    
T  4222262 aattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgcat 4222163  T
Q  552 ttttcgtcctaccccc 567  Q
    ||||||||||||||||    
T  4222162 ttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 452 - 606
Target Start/End: Original strand, 15371876 - 15372030
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||| |||||| |||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15371876 aattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 15371974  T
Q  552 ttttcgtcctaccccccattt-tattctccaaaaacgcagagaaataatagtttta 606  Q
    ||||||||| ||| || ||||  |  ||| | |||||||||||||| |||||||||    
T  15371975 ttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagtttta 15372030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 453 - 585
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat- 551  Q
    |||||| || ||||| || ||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  552 ttttcgtcctaccccccattttattctccaaaaa 585  Q
    ||||||||||||| |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 7348564 - 7348685
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  ||||||  |||||||||||||||||     
T  7348564 aattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgcac 7348663  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||||||||||||    
T  7348664 ttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 15709508 - 15709353
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| | ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||| | ||||||||| ||||||||    
T  15709508 aattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgcat 15709410  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| || ||||||||||| | ||||||||    
T  15709409 ttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 4623153 - 4623286
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||| | ||||||||||| ||||| ||||  |||||||||||||||||  |||||||||||||||||||| | ||||    
T  4623153 aattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggcat 4623252  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacg 587  Q
    ||| |||||||  ||||||||||| |||||||||||    
T  4623253 tttccgtccta--ccccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 452 - 585
Target Start/End: Original strand, 4219668 - 4219800
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | ||||||||||||||||||    
T  4219668 aattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgcat 4219767  T
Q  552 ttttcgtcctaccccccattttattctccaaaaa 585  Q
    ||||||||||| |||||||||||| |||||||||    
T  4219768 ttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 465 - 586
Target Start/End: Complemental strand, 4624752 - 4624631
Alignment:
Q  465 gtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 564  Q
    |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  || |||||||||||||| |||||||||||||||||||||    
T  4624752 gtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctacc 4624653  T
Q  565 ccccattttattctccaaaaac 586  Q
    ||||||||||| || |||||||    
T  4624652 ccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 6018319 - 6018452
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||   | |||||||||||||||||||||||     
T  6018319 aattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgcag 6018417  T
Q  552 ttttcgtcctaccccccattttattctccaaaaac 586  Q
    |||| ||||||||| | |||||   ||||||||||    
T  6018418 ttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 589
Target Start/End: Complemental strand, 13814224 - 13814131
Alignment:
Q  500 tgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    |||||||||||| ||||||||||| ||| |     ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  13814224 tgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 529 - 573
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  529 ttcaattatcatttttgttgcatttttcgtcctaccccccatttt 573  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 31152057 - 31152010
Alignment:
Q  123 aaatgtagtgagggtccaggcccacaaggagctatatgtgggtccgtcc 171  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  31152057 aaatgtagtgaggg-ccaggcccacatggagctatatgtgggtccgtcc 31152010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 577 - 623
Target Start/End: Original strand, 16752711 - 16752757
Alignment:
Q  577 ctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 623
Target Start/End: Complemental strand, 28495288 - 28495211
Alignment:
Q  546 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| |||| |||||||| || |||||   ||||| || ||||||||||| ||||||||||||||||| | ||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacctacctcatatgct 28495211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 4e-80; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 10900470 - 10900299
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900470 aattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 10900371  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  10900370 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 15828181 - 15828010
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15828181 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcat 15828082  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15828081 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 20741105 - 20741276
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  20741105 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgcat 20741204  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  20741205 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 11277122 - 11276951
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11277122 aattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcat 11277023  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  11277022 ttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 18257142 - 18257313
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257142 aattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 18257241  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  18257242 ttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 2319677 - 2319832
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319677 aattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 2319776  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2319777 ttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 31470856 - 31470685
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470856 aattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 31470757  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||| ||||||    
T  31470756 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 1149972 - 1149802
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  1149972 aattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgcat 1149873  T
Q  552 ttttcgtcctaccccccattttattctcca-aaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  1149872 ttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 12935697 - 12935528
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||    
T  12935697 aattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttacat 12935598  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||||||||||    
T  12935597 ttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 11444992 - 11445163
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  11444992 aattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgcat 11445091  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||    
T  11445092 ttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 28472642 - 28472812
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  28472642 aattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgcat 28472741  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  28472742 ttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 29859831 - 29860001
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  29859831 aattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgcat 29859930  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29859931 ttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 2322758 - 2322588
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2322758 aattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 2322659  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||| | |||||||||||| |||||||||||    
T  2322658 ttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 452 - 616
Target Start/End: Original strand, 10899944 - 10900109
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899944 aattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 10900043  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | |||||||||||||||||    
T  10900044 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 18505459 - 18505288
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  18505459 aattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgcat 18505360  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| | ||||||| | ||| ||||||||||    
T  18505359 ttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 12935162 - 12935318
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935162 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 12935261  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  12935262 ttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 23074004 - 23074164
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||           |||    
T  23074004 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-----------cat 23074092  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  23074093 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 23075668 - 23075512
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23075668 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 23075569  T
Q  552 ttttcgtcctacccccca-ttttattctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||| ||||| || | |||||  ||||||||| |||||||||| | ||||||||    
T  23075568 ttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 452 - 610
Target Start/End: Original strand, 4811377 - 4811535
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||  || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  4811377 aattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttcat 4811476  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacc 610  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  4811477 ttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 11445527 - 11445371
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11445527 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 11445428  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||| | |||||||||||||| | ||||||||    
T  11445427 ttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 22219893 - 22219737
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219893 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 22219794  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||| ||||| || ||||| |  ||||| |||| ||||||||| | ||||||||    
T  22219793 ttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 18504924 - 18505045
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| |||    
T  18504924 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttcat 18505023  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  18505024 ttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 31470320 - 31470465
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  31470320 aattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgcat 31470419  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  31470420 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 31470465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 18257677 - 18257565
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  18257677 aattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttacat 18257578  T
Q  552 ttttcgtcctacc 564  Q
    |||||||||||||    
T  18257577 ttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 20741644 - 20741496
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat---ttttgttg 548  Q
    |||||||||  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   |||| |||    
T  20741644 aattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttttttttg 20741545  T
Q  549 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  20741544 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 20741496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 29033439 - 29033577
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||     
T  29033439 aattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgcac 29033538  T
Q  552 ttttcgtcctaccccccattttatt-ctccaaaaacgca 589  Q
     |||| |||||||||||||||| || |||||||||||||    
T  29033539 atttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 452 - 616
Target Start/End: Original strand, 11276595 - 11276760
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||| | | |||| |||||||||| ||||||| ||||||| || | ||||||||||||||||||||| |||||||||||| ||||||||||| |||    
T  11276595 aattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgtttcat 11276694  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||| || ||||| |  |||||||||||||||||||| | |||||||| ||||||||    
T  11276695 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 452 - 589
Target Start/End: Complemental strand, 29035177 - 29035040
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||| | ||||||||||||||||||    
T  29035177 aattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgcat 29035078  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    ||||||||| |||| ||||||| | |||||||||||||    
T  29035077 ttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 452 - 583
Target Start/End: Complemental strand, 3835266 - 3835135
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||  |||||||| ||||||||||||| ||||| ||||  |||||||||||||||||  |||||| ||||||||||||||| ||||    
T  3835266 aattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggcat 3835167  T
Q  552 ttttcgtcctaccccccattttattctccaaa 583  Q
    |||||||||||||||||||||||| |||||||    
T  3835166 ttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 465 - 588
Target Start/End: Original strand, 18296163 - 18296285
Alignment:
Q  465 gtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 564  Q
    |||||||||||||| | ||||||| ||| || | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |    
T  18296163 gtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgcatttttcgtccta-c 18296261  T
Q  565 ccccattttattctccaaaaacgc 588  Q
    ||||||||||| ||||||||||||    
T  18296262 ccccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 15827643 - 15827766
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaa--acggtccttcaattatcatttttgttgc 549  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||||  |||||||||||| |||||||||||||||    
T  15827643 aattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgttgc 15827742  T
Q  550 atttttcgtcctaccccccatttt 573  Q
    ||||||||||||||| || |||||    
T  15827743 atttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 4811796 - 4811675
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| || |||||||||||||||||||||| ||||||| || |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  4811796 aattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 4811697  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||| || |||| || |||||    
T  4811696 ttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 535
Target Start/End: Original strand, 1149470 - 1149553
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaatt 535  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1149470 aattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 2911301 - 2911250
Alignment:
Q  123 aaatgtagtgagggtccaggcccacaaggagctatatgtgggtccgtccctg 174  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  2911301 aaatgtagtgagggcccaggcccacatggagctatacgtgggtccgtccctg 2911250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 622
Target Start/End: Complemental strand, 35163639 - 35163557
Alignment:
Q  540 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgc 622  Q
    ||||| ||||| |||| |||||||| || |||||   |||||||||| ||||||||| | |||||||| ||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 589
Target Start/End: Original strand, 835431 - 835535
Alignment:
Q  484 ctcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaa 583  Q
    ||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||| |||||  ||| ||||||||||| |||||   |||||||    
T  835431 ctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactatcattttt-ttgcagctttagtcctaccccctattttcacctccaaa 835529  T
Q  584 aacgca 589  Q
    ||||||    
T  835530 aacgca 835535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 623
Target Start/End: Complemental strand, 32836407 - 32836367
Alignment:
Q  583 aaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  32836407 aaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 4e-80; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 18984124 - 18984295
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984124 aattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 18984223  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  18984224 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 50970818 - 50970647
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970818 aattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 50970719  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  50970718 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 29869625 - 29869796
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29869625 aattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgcat 29869724  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29869725 ttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 5540358 - 5540194
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5540358 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttgcat 5540259  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  5540258 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 452 - 616
Target Start/End: Original strand, 29306958 - 29307122
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29306958 aattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 29307057  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  29307058 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 5963118 - 5962947
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  5963118 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgcat 5963019  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  5963018 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 15173101 - 15173272
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  15173101 aattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgcat 15173200  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15173201 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 33144459 - 33144288
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  33144459 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgcat 33144360  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  33144359 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 15646735 - 15646571
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646735 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 15646636  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  15646635 ttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 9018978 - 9019149
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  9018978 aattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgcat 9019077  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  9019078 ttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 21856583 - 21856412
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  21856583 aattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgcat 21856484  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  21856483 ttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 26859599 - 26859431
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||||||||||||| ||||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26859599 aattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgcat 26859500  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26859499 ttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 8679081 - 8678911
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  8679081 aattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgcat 8678982  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| || ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  8678981 ttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 17433221 - 17433392
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| |||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17433221 aattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat 17433320  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  17433321 ttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 39154024 - 39154195
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| || ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39154024 aattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgcat 39154123  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||| | ||||||||||    
T  39154124 ttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 29307482 - 29307317
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307482 aattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 29307383  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | |||||||||||||||||    
T  29307382 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 452 - 609
Target Start/End: Complemental strand, 17433755 - 17433597
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433755 aattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 17433656  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagac 609  Q
    ||||||||||||| || ||||| |  || || |||||||||||||| | ||||||||||    
T  17433655 ttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 8678546 - 8678658
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8678546 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcat 8678645  T
Q  552 ttttcgtcctacc 564  Q
    |||||||||||||    
T  8678646 ttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 26859064 - 26859220
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26859064 aattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 26859163  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| |  ||||| |  ||||| |||||||||||| ||||||||||||    
T  26859164 ttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttag 26859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 452 - 605
Target Start/End: Original strand, 50970283 - 50970437
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  50970283 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgcat 50970382  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttt 605  Q
    |||||||||||||  | ||||| |  ||||| |||||||||||||| | ||||||    
T  50970383 ttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 4636511 - 4636366
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4636511 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgcat 4636412  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||| ||| || ||||| |  ||||| ||||||||||||||    
T  4636411 ttttcgtcccacctcctattttcaaactccagaaacgcagagaaat 4636366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 5539821 - 5539942
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5539821 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgtat 5539920  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  5539921 ttttcgtcctacctcctatttt 5539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 9019503 - 9019338
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  9019503 aattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 9019404  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||| || ||||| |  | ||| |||||||||||||||| |||||||||||| ||||    
T  9019403 ttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 18984659 - 18984538
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984659 aattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 18984560  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  18984559 ttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 29870159 - 29870038
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29870159 aattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 29870060  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  29870059 ttttcgtcctacctcctatttt 29870038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 455 - 607
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  455 tacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttt 554  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  555 tcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||||| || ||||| |  ||| | |||||||||||||| | ||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 21856047 - 21856203
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856047 aattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 21856146  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||| ||||| | || ||||| |  ||||| |||||||||||||| | ||||||||    
T  21856147 ttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 39154560 - 39154439
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  39154560 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgcat 39154461  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  39154460 ttttcgtcctacctcctatttt 39154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 15173633 - 15173478
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  15173633 aattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 15173535  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||| | |||||||||||||| | ||||||||    
T  15173534 ttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 15646197 - 15646309
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15646197 aattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgcat 15646296  T
Q  552 ttttcgtcctacc 564  Q
    |||||||||||||    
T  15646297 ttttcgtcctacc 15646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 52268295 - 52268430
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||     
T  52268295 aattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgcac 52268394  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacg 587  Q
    |||||||||||||||||||||| | |||||||||||    
T  52268395 ttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 507 - 621
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  507 ttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagtttta 606  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| | |||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  607 gacctaccccctatg 621  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 5962583 - 5962704
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||||||||| ||| ||| ||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  5962583 aattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgcat 5962682  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||| ||||| || |||||    
T  5962683 ttttcgttctacctcctatttt 5962704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 563
Target Start/End: Complemental strand, 52269288 - 52269177
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| | |||||| ||||  |||  |||||||||||||||||||||||  ||| |||| |||||||||||||||||     
T  52269288 aattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttgcac 52269189  T
Q  552 ttttcgtcctac 563  Q
    ||||||||||||    
T  52269188 ttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 17112287 - 17112442
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  |||||||||||||||||||| ||||||    
T  17112287 aattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttattgcat 17112385  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| ||||||||| |||| ||||||||||    
T  17112386 ttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 472 - 547
Target Start/End: Complemental strand, 47827108 - 47827033
Alignment:
Q  472 tgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 547  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 533
Target Start/End: Complemental strand, 2733497 - 2733416
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaa 533  Q
    ||||| |||| ||||||| ||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  2733497 aattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 522
Target Start/End: Original strand, 47826969 - 47827039
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaa 522  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826969 aattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 623
Target Start/End: Complemental strand, 9833599 - 9833522
Alignment:
Q  546 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| |||| ||||||||||| |||||   ||||| ||||||| |||||||| | |||||| |||||| ||||||||    
T  9833599 ttgcagttttagtcctaccccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 6e-79; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 452 - 621
Target Start/End: Original strand, 11090526 - 11090695
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090526 aattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 11090625  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  11090626 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 22374325 - 22374496
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374325 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 22374424  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || |||||||    
T  22374425 ttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 40027145 - 40027316
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027145 aattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 40027244  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  40027245 tttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 40815885 - 40815714
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40815885 aattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgcat 40815786  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  40815785 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 452 - 621
Target Start/End: Original strand, 28616618 - 28616788
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28616618 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcaa 28616717  T
Q  552 ttttcgtcctaccccccattttattctcc-aaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||    
T  28616718 ttttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 239358 - 239528
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  239358 aattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 239456  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  239457 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 452 - 620
Target Start/End: Original strand, 14432147 - 14432315
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  14432147 aattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgcat 14432246  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctat 620  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  14432247 ttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 18451371 - 18451200
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  18451371 aattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgcat 18451272  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18451271 ttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 26538102 - 26538273
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26538102 aattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgcat 26538201  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||    
T  26538202 ttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 1978113 - 1978284
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1978113 aattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 1978212  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| |||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  1978213 tttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 43058338 - 43058509
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43058338 aattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 43058437  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  43058438 ttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 453 - 623
Target Start/End: Original strand, 3025472 - 3025641
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 552  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  553 tttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||    
T  3025572 tttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 26538619 - 26538454
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26538619 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 26538520  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    |||||||||||||||||||||| |  | ||| |||||||||||||| | |||||||||||||||||    
T  26538519 ttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 8425900 - 8425736
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| || ||||||||| |||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  8425900 aattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgcat 8425801  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  8425800 ttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 20444754 - 20444890
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  20444754 aattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgcag 20444853  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||||||||||||||||||| ||||||||||||    
T  20444854 ttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 40815350 - 40815506
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  40815350 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgcat 40815449  T
Q  552 ttttcgtcctacccccca-ttttattctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || | |||||  ||||| |||||||||||||| | ||||||||    
T  40815450 ttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 22374865 - 22374744
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374865 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 22374766  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  22374765 ttttcgtcctacctcctatttt 22374744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 35781203 - 35781067
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35781203 aattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgcat 35781104  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  35781103 ttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 7446347 - 7446490
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||||||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  7446347 aattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgcat 7446446  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaat 596  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  7446447 ttttcgtcata-cccccattttattctccaaaaacgcagagaaat 7446490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 7446886 - 7446730
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || || ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446886 aattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 7446787  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  |||||||||||||||||||| | ||||||||    
T  7446786 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 18450835 - 18450991
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18450835 aattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcat 18450934  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||| |||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  18450935 ttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 40027680 - 40027559
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40027680 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcat 40027581  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  40027580 ttttcgtcctacctcctatttt 40027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 20440571 - 20440436
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||     
T  20440571 aattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgcag 20440472  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    ||||||||||| |||||| ||||| ||||||||||||    
T  20440471 ttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 28617154 - 28616998
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28617154 aattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 28617055  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||| |||| || ||||| |  ||||| |||||||||||||||  ||||||||    
T  28617054 ttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 35779713 - 35779849
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| | ||||||||||| ||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  35779713 aattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcat 35779812  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  35779813 tttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 562
Target Start/End: Complemental strand, 11091060 - 11090950
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  11091060 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttgtat 11090961  T
Q  552 ttttcgtccta 562  Q
    |||||||||||    
T  11090960 ttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 454 - 596
Target Start/End: Complemental strand, 239890 - 239747
Alignment:
Q  454 ttacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 553  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttt 239791  T
Q  554 ttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    |||||| |||| || ||||| |  ||||| ||||||||||||||    
T  239790 ttcgtcatacctcctattttcaaactccagaaacgcagagaaat 239747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 1978649 - 1978528
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1978649 aattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgcat 1978550  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    |||| |||||||| || |||||    
T  1978549 tttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 438 - 564
Target Start/End: Complemental strand, 28847251 - 28847123
Alignment:
Q  438 attagaatataggc--aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaatt 535  Q
    |||| |||||||||  ||||||| || ||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  28847251 attataatataggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaatt 28847152  T
Q  536 atcatttttgttgcatttttcgtcctacc 564  Q
    |||||||||||||||||||||||||||||    
T  28847151 atcatttttgttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 43058872 - 43058728
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  43058872 aattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttgttgcat 43058774  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  43058773 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 43058728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 8972242 - 8972378
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| |||||||||||||||||||||||    
T  8972242 aattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgcat 8972341  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    ||||||| |||||||| ||||||| ||||||||||||    
T  8972342 ttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 15551504 - 15551641
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| ||||||||||||||||||    
T  15551504 aattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgcat 15551603  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    ||||||||| |||| ||||||||| |||||||||||||    
T  15551604 ttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 452 - 606
Target Start/End: Original strand, 8425360 - 8425514
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8425360 aattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgcat 8425458  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttta 606  Q
    ||||||||||||| || ||||| |  ||||| ||| |||||||||| | |||||||    
T  8425459 ttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 463 - 606
Target Start/End: Complemental strand, 3025991 - 3025848
Alignment:
Q  463 tggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta 562  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  3025991 tggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgcatttttcgtccta 3025893  T
Q  563 ccccccatttt-attctccaaaaacgcagagaaataatagtttta 606  Q
    || || ||||| |  ||||| ||| |||||||||| | |||||||    
T  3025892 cctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 14432681 - 14432525
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| ||| |||||||||| |||||||||||||    
T  14432681 aattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgcat 14432582  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||| ||||||| || ||||| |  ||| | |||||||||||||| | ||||||||    
T  14432581 ttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 15552593 - 15552459
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |  ||||||||||||||||||||| || ||  ||||||||||||||||||||||  ||| |||||||||||||||||||| ||    
T  15552593 aattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgtat 15552495  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacg 587  Q
    |||||||||||||| |||||||   |||||||||||    
T  15552494 ttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 28143570 - 28143400
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||| ||||| |||||||||  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||  |||| | || |||||| ||| |||||     
T  28143570 aatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt-ttgcag 28143472  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| |||||||  || |||||   ||||| |||||||||||||| | ||||||||||||||||||||||||    
T  28143471 ttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 9e-78; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 5136985 - 5137156
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136985 aattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 5137084  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  5137085 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 23644467 - 23644638
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23644467 aattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttgcat 23644566  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23644567 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 39556117 - 39555946
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  39556117 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgcat 39556018  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  39556017 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 41046705 - 41046876
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046705 aattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 41046804  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  41046805 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 31779192 - 31779021
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779192 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 31779093  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||| |||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||    
T  31779092 ttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 25853767 - 25853596
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||||||||||||  ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  25853767 aattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 25853668  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25853667 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 452 - 621
Target Start/End: Original strand, 20840565 - 20840734
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  20840565 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgcat 20840664  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||||||||||||||||||||||||  |||||||||||||| | ||||||||||||||||||||||    
T  20840665 ttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 24301096 - 24300925
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||| |||||||||||||||| | |||||||||||||||||    
T  24301096 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgcat 24300997  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  24300996 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 37726934 - 37727105
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| || || |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37726934 aattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcat 37727033  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  37727034 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 452 - 616
Target Start/End: Original strand, 43973446 - 43973610
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973446 aattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 43973545  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43973546 ttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 22425353 - 22425182
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  22425353 aattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgcat 22425254  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  22425253 ttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 452 - 621
Target Start/End: Complemental strand, 32535503 - 32535330
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatc-----atttttgt 546  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     ||||||||    
T  32535503 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatttttgt 32535404  T
Q  547 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32535403 tgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 27394117 - 27393946
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  27394117 aattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgttgcat 27394018  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||| | |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  27394017 tttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 453 - 596
Target Start/End: Original strand, 48452995 - 48453138
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 552  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  553 tttcgtcctaccccccattttattctccaaaaacgcagagaaat 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaat 48453138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 30104487 - 30104657
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  30104487 aattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgcat 30104586  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| ||||||||||||| || |||||||||||||||| | ||||||||||||||||||||||||    
T  30104587 ttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 17465032 - 17464860
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||||||||| || |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17465032 aattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcat 17464933  T
Q  552 -ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
     |||| ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||    
T  17464932 ttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 26837895 - 26837725
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| |||| |||||||||||||| ||||| |||||||||||||||||    
T  26837895 aattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgcat 26837797  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||||||||||    
T  26837796 tttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 26275087 - 26274936
Alignment:
Q  471 gtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccat 570  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  26275087 gtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 26274989  T
Q  571 tttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  26274988 tttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 25853239 - 25853395
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25853239 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcat 25853338  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||| ||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  25853339 ttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 37727470 - 37727314
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727470 aattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 37727371  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  37727370 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 43973980 - 43973824
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43973980 aattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 43973881  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| || | ||| |||||||||||||| | ||||||||    
T  43973880 ttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 4275904 - 4275759
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4275904 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgcat 4275805  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  4275804 ttttcgtcctacctcctattttcaaactccataaacgcagagaaat 4275759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 20841101 - 20840956
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20841101 aattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 20841002  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  20841001 ttttcgtcctacctcctattttcaaactccataaacgcagagaaat 20840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 25612517 - 25612381
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||| ||| || ||||||||||||||||||||    
T  25612517 aattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgcat 25612418  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25612417 ttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 27393666 - 27393822
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27393666 aattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 27393765  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||||||||||||||| ||||| |  | ||| |||||||||||||| | ||||||||    
T  27393766 ttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 39555583 - 39555739
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  39555583 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 39555682  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||| ||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  39555683 ttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 17464496 - 17464617
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17464496 aattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 17464595  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  17464596 ttttcgtcctacctcctatttt 17464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 30098303 - 30098182
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30098303 aattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcat 30098204  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  30098203 ttttcgtcctacctcctatttt 30098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 31778658 - 31778814
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  31778658 aattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgcat 31778757  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  31778758 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 609
Target Start/End: Complemental strand, 29801956 - 29801798
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29801956 aattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcat 29801857  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagac 609  Q
    ||||||||| ||| || ||||| |  ||||| |||||||||||||| | | ||||||||    
T  29801856 ttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 32534964 - 32535085
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32534964 aattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 32535063  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  32535064 ttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 5137521 - 5137365
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5137521 aattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcat 5137422  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    |||| |||||| | || ||||| |  ||||| |||||||||||||| | ||||||||    
T  5137421 ttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 568
Target Start/End: Original strand, 29801361 - 29801477
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29801361 aattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat 29801460  T
Q  552 ttttcgtcctacccccc 568  Q
    |||||||| ||||||||    
T  29801461 ttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 23228547 - 23228414
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  |||||||||||||||||||| ||||||    
T  23228547 aattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttattgcat 23228449  T
Q  552 ttttcgtcctaccccccattttattctccaaaaac 586  Q
    ||||||||||||| |||||||||| ||||||||||    
T  23228448 ttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 23645005 - 23644884
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23645005 aattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 23644906  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||| ||||||| || |||||    
T  23644905 ttttcatcctacctcctatttt 23644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 589
Target Start/End: Complemental strand, 50116949 - 50116812
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||||||| |||| |||||||||||||||||     
T  50116949 aattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgcaa 50116850  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    |||||||||||||||||||||| | |||||||||||||    
T  50116849 ttttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 22424819 - 22424975
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| |||||||||  ||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22424819 aattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 22424918  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| ||| |||||||||| | ||||||||    
T  22424919 ttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 26837365 - 26837521
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||| || ||||||||||||||||||| ||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  26837365 aattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgcat 26837464  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  26837465 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 26274572 - 26274693
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || || |||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26274572 aattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 26274671  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    |||||||| |||| || |||||    
T  26274672 ttttcgtcatacctcctatttt 26274693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 463 - 587
Target Start/End: Complemental strand, 32697229 - 32697106
Alignment:
Q  463 tggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta 562  Q
    ||||||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  32697229 tggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgcatttttcgtccta 32697130  T
Q  563 ccccccattttattctccaaaaacg 587  Q
    | ||||||||||| |||||||||||    
T  32697129 c-ccccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 51474874 - 51474737
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  |||||| | ||||||||||||||||||    
T  51474874 aattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgcat 51474775  T
Q  552 ttttcgtcctacccccca-ttttattctccaaaaacgc 588  Q
    |||||||||||||||| | |||||| ||||||||||||    
T  51474774 ttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 472 - 596
Target Start/End: Complemental strand, 41047218 - 41047094
Alignment:
Q  472 tgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatt 571  Q
    ||||||||||||||||||||||||||  || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctatt 41047120  T
Q  572 tt-attctccaaaaacgcagagaaat 596  Q
    || |  ||||| ||||||||||||||    
T  41047119 ttcaaactccagaaacgcagagaaat 41047094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 607
Target Start/End: Original strand, 24300577 - 24300717
Alignment:
Q  468 ctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccc 567  Q
    ||||||||||||| || |||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||| ||    
T  24300577 ctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgcaattttcgtcccacctcc 24300676  T
Q  568 catttt-attctccaaaaacgcagagaaataatagttttag 607  Q
     ||||| |  ||||| |||||||||||||| | ||||||||    
T  24300677 tattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 37220562 - 37220698
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  |||||||| |||||||||||||||||     
T  37220562 aattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttgcac 37220661  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  37220662 ttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 591
Target Start/End: Complemental strand, 25420681 - 25420542
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||||||||||||| |||||||||||||    
T  25420681 aattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgcat 25420582  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcaga 591  Q
    |||||||| ||||||||||||||| || |||||| |||||    
T  25420581 ttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 452 - 585
Target Start/End: Original strand, 45965943 - 45966076
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||  |  || ||| ||||||||||| |||||||  ||||||| |||||||||| ||||||||    
T  45965943 aattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttgcat 45966042  T
Q  552 ttttcgtcctaccccccattttattctccaaaaa 585  Q
    ||||||| ||| |||||||||| | |||||||||    
T  45966043 ttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 452 - 561
Target Start/End: Original strand, 51473433 - 51473542
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||  |||||||  |||||||||||||||||     
T  51473433 aattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgcac 51473532  T
Q  552 ttttcgtcct 561  Q
    |||| |||||    
T  51473533 ttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 466 - 575
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  466 tcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 565  Q
    ||||| |||||| | |||||||||||| ||||   ||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||| |||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  566 cccattttat 575  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 453 - 588
Target Start/End: Original strand, 25419150 - 25419285
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtcc-ttcaattatca-tttttgttgca 550  Q
    |||| |||| ||||| ||||||||| || ||||||||||| | ||  |||||||||||||||||||||||| |||| ||||||||||| ||||| |||||    
T  25419150 attatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatttttttttgca 25419249  T
Q  551 tttttcgtcctaccccccattttattctccaaaaacgc 588  Q
     |||| |||||  |||||||||||  ||||||||||||    
T  25419250 gttttagtccttacccccatttta--ctccaaaaacgc 25419285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 533
Target Start/End: Complemental strand, 37222111 - 37222030
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaa 533  Q
    |||||||||| |||||||||||||||| ||||||||| ||| ||||| |||| |||||||||||||||||||  ||||||||    
T  37222111 aattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 589
Target Start/End: Original strand, 23227319 - 23227398
Alignment:
Q  510 aaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    ||||||||||||   ||||| ||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  23227319 aaacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 574
Target Start/End: Original strand, 32695708 - 32695830
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||| | |||||||||||| |||||| || |  || | ||||||||||||||||||  ||||| | ||||| ||||||||||||     
T  32695708 aattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgcaa 32695807  T
Q  552 ttttcgtcctaccccccatttta 574  Q
    |||| |||||  ||| |||||||    
T  32695808 ttttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 3469185 - 3469132
Alignment:
Q  122 caaatgtagtgagggtccaggcccacaaggagctatatgtgggtccgtccctgc 175  Q
    |||||||||||||||  |||||||||| ||||||||| ||||||||||||||||    
T  3469185 caaatgtagtgagggctcaggcccacatggagctatacgtgggtccgtccctgc 3469132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 624
Target Start/End: Original strand, 49407801 - 49407972
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | |   ||||||  ||     
T  49407801 aattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttgta-cag 49407899  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgcta 624  Q
    |||| ||| |||| || |||||   |||||||||||||||||||| | | |||||||||||||||||||||||    
T  49407900 ttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 552 - 623
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| |||||||| || |||||   ||||| |||||||||||||| | ||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 623
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  563 ccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||| |||||| |||||||||| | |||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 623
Target Start/End: Original strand, 37075781 - 37075864
Alignment:
Q  540 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| |||||||||||||| |  |||||||||||||||||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 617
Target Start/End: Complemental strand, 33412417 - 33412383
Alignment:
Q  583 aaacgcagagaaataatagttttagacctaccccc 617  Q
    |||||||||||||| ||||||||||||||||||||    
T  33412417 aaacgcagagaaatgatagttttagacctaccccc 33412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 623
Target Start/End: Original strand, 27199838 - 27199878
Alignment:
Q  583 aaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  27199838 aaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 623
Target Start/End: Complemental strand, 27200150 - 27200062
Alignment:
Q  535 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||| ||| ||||| |||| ||| |||| || |||||   ||||| |||||||||||||| | || |||||||||||||| ||||||    
T  27200150 tatcatgttttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 2e-75; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 11153687 - 11153516
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  11153687 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgcat 11153588  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  11153587 ttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 12234334 - 12234505
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12234334 aattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 12234433  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12234434 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 33109689 - 33109860
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33109689 aattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 33109788  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||    
T  33109789 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 46193945 - 46193774
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46193945 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcat 46193846  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||    
T  46193845 ttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 452 - 617
Target Start/End: Complemental strand, 25447776 - 25447611
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25447776 aattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcat 25447677  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccc 617  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  25447676 ttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 15523774 - 15523603
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  15523774 aattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgcat 15523675  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  15523674 ttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 25937675 - 25937846
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937675 aattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 25937774  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| |||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  25937775 tttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 38962359 - 38962195
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962359 aattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 38962260  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  38962259 ttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 2118835 - 2118665
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||| |  |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  2118835 aattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgcat 2118736  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2118735 ttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 4219562 - 4219733
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||| |||||||||||||||||||||||||||    
T  4219562 aattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgcat 4219661  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  4219662 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 22434716 - 22434547
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22434716 aattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgttgcat 22434618  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  22434617 ttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 23494448 - 23494619
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  23494448 aattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgcat 23494547  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| | ||||||    
T  23494548 ttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 54995607 - 54995437
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  54995607 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgcat 54995509  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||    
T  54995508 ttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 22170476 - 22170306
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| |||||| |||||| || || |||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  22170476 aattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttgcat 22170378  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  22170377 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 48526201 - 48526371
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||| ||||||||||| |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48526201 aattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 48526300  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||    
T  48526301 ttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 51020802 - 51020973
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||| |||||||||  | |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51020802 aattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgcat 51020901  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  51020902 ttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 45082437 - 45082606
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||| ||| ||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45082437 aattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcat 45082535  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| | | ||||||||||||||||||||||    
T  45082536 ttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 452 - 609
Target Start/End: Original strand, 46193410 - 46193568
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46193410 aattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgcat 46193509  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagac 609  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||||    
T  46193510 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 25447252 - 25447397
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25447252 aattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 25447351  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  25447352 ttttcgtcctacctcctattttcaaactccataaacgcagagaaat 25447397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 22434184 - 22434340
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22434184 aattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgtat 22434283  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  22434284 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 45082964 - 45082808
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45082964 aattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 45082865  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||| | |||||||||||||| | ||||||||    
T  45082864 ttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 452 - 563
Target Start/End: Complemental strand, 23494983 - 23494872
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494983 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 23494884  T
Q  552 ttttcgtcctac 563  Q
    ||||||||||||    
T  23494883 ttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 4220099 - 4219943
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  4220099 aattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgcat 4220000  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  || ||||||||||||||||||| ||||||||    
T  4219999 ttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 20471051 - 20470895
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20471051 aattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 20470952  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  20470951 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 48526721 - 48526565
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48526721 aattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgcat 48526622  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||| ||||||||| | ||||||||    
T  48526621 ttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 452 - 606
Target Start/End: Original strand, 15523240 - 15523395
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  15523240 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttgcat 15523339  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttta 606  Q
    ||||||||||||| || ||||| |  ||| | |||||||||||||| | |||||||    
T  15523340 ttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 12234869 - 12234748
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234869 aattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 12234770  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  12234769 ttttcgtcctacctcctatttt 12234748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 54995074 - 54995195
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54995074 aattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 54995173  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  54995174 ttttcgtcctacctcctatttt 54995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 515 - 623
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  515 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacc 614  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  615 ccctatgct 623  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 18751604 - 18751725
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18751604 aattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgcat 18751703  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||| ||| || |||||    
T  18751704 ttttcgtcccacctcctatttt 18751725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 25938211 - 25938090
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25938211 aattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgcat 25938112  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    |||| |||||||| || |||||    
T  25938111 tttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 33110004 - 33109883
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33110004 aattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcat 33109905  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  33109904 ttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 607
Target Start/End: Original strand, 11153151 - 11153307
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  11153151 aattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttgcat 11153250  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  | ||| |||||||||||||| | ||||||||    
T  11153251 ttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 465 - 588
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  465 gtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 564  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||||||     
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac- 43243709  T
Q  565 ccccattttattctccaaaaacgc 588  Q
    ||||||||||| ||||||||||||    
T  43243708 ccccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 2118298 - 2118419
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  2118298 aattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgcat 2118397  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  2118398 ttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 561
Target Start/End: Complemental strand, 18764060 - 18763951
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  18764060 aattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgcat 18763961  T
Q  552 ttttcgtcct 561  Q
    ||||||||||    
T  18763960 ttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 589
Target Start/End: Complemental strand, 20958399 - 20958264
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  20958399 aattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgcat 20958300  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    |||| |||||| |||||||||||| |||||||||||||    
T  20958299 tttt-gtccta-cccccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 51021335 - 51021191
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  51021335 aattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgttgcat 51021237  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 596  Q
    ||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  51021236 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 51021191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 463 - 588
Target Start/End: Complemental strand, 44892677 - 44892552
Alignment:
Q  463 tggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta 562  Q
    |||||||||||||||| ||||||||||||| ||||  |||| ||||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||    
T  44892677 tggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgcatttttcgtccta 44892578  T
Q  563 ccccccattttattctccaaaaacgc 588  Q
    ||| ||||||||| ||||||||||||    
T  44892577 ccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 468 - 589
Target Start/End: Complemental strand, 48713870 - 48713749
Alignment:
Q  468 ctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccc 567  Q
    |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |    
T  48713870 ctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctcccctc 48713771  T
Q  568 cattttattctccaaaaacgca 589  Q
    |||||||| |||||||||||||    
T  48713770 cattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 465 - 585
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  465 gtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 564  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  565 ccccattttattctccaaaaa 585  Q
    ||||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 464 - 607
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  464 ggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 563  Q
    ||||||||||||||| | |||||||||||||| ||  ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  564 cccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    | || ||||| |  ||||| |||||||||||||| | ||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 48293599 - 48293735
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| ||||||||||| || || || |  ||||||||| |||||||  || ||||||||||||||||||||||||    
T  48293599 aattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgcat 48293698  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    ||||| |||| ||| ||||||||||||||||||||||    
T  48293699 ttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 48295083 - 48294946
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||| ||||||||||  |||||||||||| ||||||||||  ||||||||| |||||||  ||| |||||||||||||||||||||||    
T  48295083 aattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgcat 48294984  T
Q  552 tttt-cgtcctaccccccattttattctccaaaaacgc 588  Q
    |||| ||||||||||||||||||||  |||||||||||    
T  48294983 ttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 583
Target Start/End: Original strand, 16690941 - 16691072
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||| ||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||   ||||||||||||||||||||||||||    
T  16690941 aattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgcat 16691040  T
Q  552 ttttcgtcctaccccccattttattctccaaa 583  Q
    |||||||||||||||| ||||||| |||||||    
T  16691041 ttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 454 - 585
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  454 ttacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 553  Q
    ||||| || ||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  554 ttcgtcctaccccccattttattctccaaaaa 585  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 35363141 - 35363028
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaa-caaaacggtccttcaattatcatttttgttgca 550  Q
    |||||||||| || ||||||||||||||||||||||||||||||||  ||| ||||||||| | || |||||||||| ||||||||||||||||||||||    
T  35363141 aattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttgca 35363042  T
Q  551 tttttcgtcctacc 564  Q
    |||||||| |||||    
T  35363041 tttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 44890522 - 44890658
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||  ||||||||||||    
T  44890522 aattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttgcat 44890621  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    ||||| || ||||||||||||||| ||| ||||||||    
T  44890622 ttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 583
Target Start/End: Original strand, 48708300 - 48708431
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||  |||||||||||||  ||||||| || || ||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  48708300 aattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttgcat 48708399  T
Q  552 ttttcgtcctaccccccattttattctccaaa 583  Q
    || |  ||||||| | |||||||| |||||||    
T  48708400 ttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 10258427 - 10258306
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||  ||||  ||  ||||||||||||||||||||||     
T  10258427 aattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttgttgcag 10258328  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    |||| ||| ||||||| |||||    
T  10258327 ttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  505 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2703305 - 2703245
Alignment:
Q  18 cattttcgtgctggtttagggtttatgtgttaattaggtttcattcctcaattgaaataat 78  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2703305 cattttcgtgctggtttagggtttatgtgttaattaagtttcattcctcaattgaaataat 2703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 452 - 583
Target Start/End: Complemental strand, 16691611 - 16691481
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||  |||||||| ||||||||||||| ||||| ||||  |||||| || |||||||  |||||| |||||| |||||||||||||    
T  16691611 aattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgttgcat 16691513  T
Q  552 ttttcgtcctaccccccattttattctccaaa 583  Q
    |||||||| |||| |||||||||| |||||||    
T  16691512 ttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 556 - 623
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  556 cgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 517
Target Start/End: Complemental strand, 16318316 - 16318251
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaa 517  Q
    |||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  16318316 aattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  508 taaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||||||||||  |||||||| |||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 555
Target Start/End: Original strand, 55189547 - 55189636
Alignment:
Q  466 tcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttt 555  Q
    ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| ||||||||||||||||| | |||||||    
T  55189547 tcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgctacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 535 - 623
Target Start/End: Original strand, 17504061 - 17504149
Alignment:
Q  535 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||| ||| ||||| |||| |||||||| || |||||   ||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  17504061 tatcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 623
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  583 aaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 588
Target Start/End: Complemental strand, 30598059 - 30597925
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactgg-tcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||||| |||||||||||||||| || ||||||| || ||| |||  | |||||||| | ||||||||  |||| | |||||| ||||||||||||     
T  30598059 attacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttgttgcac 30597962  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||| |||||| |||| ||||||   |||||||||||    
T  30597961 ttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 623
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  583 aaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 142; Significance: 3e-74; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 452 - 621
Target Start/End: Original strand, 1672 - 1841
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  1672 aattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgcat 1771  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatg 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1772 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 452 - 607
Target Start/End: Complemental strand, 2207 - 2051
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2207 aattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 2108  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  2107 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 140; Significance: 5e-73; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 4747 - 4576
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4747 aattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgcat 4648  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  4647 ttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 486 - 607
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  486 cacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaa 584  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  585 acgcagagaaataatagttttag 607  Q
    | |||||||||| | ||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 140; Significance: 5e-73; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 134213 - 134042
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  134213 aattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttgcat 134114  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  134113 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 758 - 928
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  758 aattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttgcat 856  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  857 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 1281 - 1160
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1281 aattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 1182  T
Q  552 ttttcgtcctaccccccatttt 573  Q
     |||||||||||| || |||||    
T  1181 ctttcgtcctacctcctatttt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 136; Significance: 1e-70; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 64307 - 64478
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||| | |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  64307 aattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 64406  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  64407 ttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 452 - 562
Target Start/End: Complemental strand, 64845 - 64735
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  64845 aattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgcat 64746  T
Q  552 ttttcgtccta 562  Q
    |||||||||||    
T  64745 ttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 205908 - 205738
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | ||||||   ||||| || |||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || |||||| ||| |||||     
T  205908 aattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttgcag 205810  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||| |||||||  || |||||   ||||||||||||||||||||   ||||||||||||||||||||||||    
T  205809 ttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 128; Significance: 7e-66; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 10412 - 10242
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10412 aattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 10313  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||  ||||||||| | ||||||| ||||||||||||||||    
T  10312 ttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 452 - 554
Target Start/End: Original strand, 9937 - 10039
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||||| || ||||||||||||||| ||||| ||||||||||| |||||||||||||| | ||||||||| |||||||||||||||| ||||||| |||    
T  9937 aattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttacat 10036  T
Q  552 ttt 554  Q
    |||    
T  10037 ttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 466 - 623
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  466 tcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 565  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  566 cccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
     ||||||||||||||||||| |||||||||| | |||||||||| |||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 11163 - 11042
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11163 aattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcat 11064  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    ||||||||||||| || |||||    
T  11063 ttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 453 - 614
Target Start/End: Original strand, 18841 - 19001
Alignment:
Q  453 attacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 552  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18841 attacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatt 18940  T
Q  553 tttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacc 614  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  18941 tttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 452 - 544
Target Start/End: Complemental strand, 19161 - 19069
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 544  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19161 aattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 452 - 623
Target Start/End: Complemental strand, 42698 - 42528
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    ||||| |||| ||| ||||||||||||| ||||||| ||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  42698 aattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttcat 42599  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 623  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  42598 ttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 452 - 616
Target Start/End: Original strand, 42174 - 42339
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| | || |||||||||||| ||| ||||||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  42174 aattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgcat 42273  T
Q  552 ttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagacctacccc 616  Q
    |||| ||| |||| || ||||| |  || || |||||||||||||| | |||||||||||||||||    
T  42274 tttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 28783 - 28662
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  28783 aattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcag 28684  T
Q  552 ttttcgtcctaccccccatttt 573  Q
    |||||||||| |||||||||||    
T  28683 ttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 6e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 515 - 623
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  515 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctacc 614  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  615 ccctatgct 623  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 464 - 607
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  464 ggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 563  Q
    ||||||||||||||| | |||||||||||||| ||  ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  564 cccccatttt-attctccaaaaacgcagagaaataatagttttag 607  Q
    | || ||||| |  ||||| |||||||||||||| | ||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 572 - 709
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  572 aattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgtat 671  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    ||||||||  ||| ||||||| || |||||||||||||    
T  672 ttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 61998 - 61862
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 551  Q
    |||||||||| || |||||||||||||| |||||||||||| ||||| | ||||||||||| |||||||||   || ||||| |||||||||||||  ||    
T  61998 aattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttatat 61899  T
Q  552 ttttcgtcctaccccccattttattctccaaaaacgc 588  Q
    |||||||||||||||||||||| | ||||||||||||    
T  61898 ttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 61036 - 61102
Alignment:
Q  455 tacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaa 521  Q
    ||||||| || ||||||||||||||||||||||||||| || || |||| |||||||| ||||||||    
T  61036 tacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 463 - 588
Target Start/End: Original strand, 465 - 589
Alignment:
Q  463 tggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccta 562  Q
    ||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  465 tggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtccta 564  T
Q  563 ccccccattttattctccaaaaacgc 588  Q
     | |||||||||| ||| ||||||||    
T  565 -cacccattttatcctcaaaaaacgc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 502 - 589
Target Start/End: Complemental strand, 7778 - 7691
Alignment:
Q  502 cccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 589  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7778 cccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

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Target: scaffold0076 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 452 - 550
Target Start/End: Complemental strand, 8549 - 8451
Alignment:
Q  452 aattacacttatggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 550  Q
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T  8549 aattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgca 8451  T

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