View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3537_low_55 (Length: 246)
Name: NF3537_low_55
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3537_low_55 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 26930704 - 26930919
Alignment:
| Q |
13 |
cataggagtatgatcaaatatggtcccctttgaaggttgtttggggggccaaactgacataagccttcccctttttcacgccttgtccttactgtcttcc |
112 |
Q |
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| T |
26930704 |
cataggagtatgatcaaatatggtcccctttgaaggttgtttggggggccaaactgacataagccttcccctttttcacgccttgtccttactgtcttcc |
26930803 |
T |
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| Q |
113 |
ctagctagtatacggtctcagcattaaacacaaaaactttgttgcttcccaaaagtgaagtatatggaggaaccattgctcaccaattcactctcactct |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26930804 |
ctagctagtatacggtctcagcattaaacacaaaaactttgttgcttcccaaaagtgaagtatatggaggaaccattgctcaccaattcactctcactct |
26930903 |
T |
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| Q |
213 |
cactcttcactcccct |
228 |
Q |
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||||||||||| |||| |
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| T |
26930904 |
cactcttcacttccct |
26930919 |
T |
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