View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3537_low_64 (Length: 238)

Name: NF3537_low_64
Description: NF3537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3537_low_64
NF3537_low_64
[»] chr8 (34 HSPs)
chr8 (18-233)||(45464329-45464545)
chr8 (189-238)||(33610371-33610420)
chr8 (187-238)||(23223336-23223387)
chr8 (177-233)||(39446072-39446128)
chr8 (177-233)||(24968659-24968714)
chr8 (189-233)||(31590821-31590865)
chr8 (189-232)||(23351035-23351078)
chr8 (176-238)||(18040916-18040978)
chr8 (189-238)||(22735207-22735256)
chr8 (189-238)||(23159035-23159084)
chr8 (189-238)||(23218681-23218729)
chr8 (189-238)||(33173027-33173076)
chr8 (177-229)||(22496605-22496657)
chr8 (189-233)||(24908616-24908660)
chr8 (189-233)||(24910837-24910881)
chr8 (189-233)||(33529290-33529334)
chr8 (187-238)||(17502988-17503038)
chr8 (176-227)||(22745543-22745594)
chr8 (189-231)||(5855419-5855461)
chr8 (180-238)||(20175139-20175197)
chr8 (180-238)||(20219866-20219924)
chr8 (189-231)||(26012299-26012341)
chr8 (177-231)||(37651814-37651867)
chr8 (189-238)||(22314910-22314959)
chr8 (189-238)||(22723950-22723999)
chr8 (189-238)||(24240416-24240464)
chr8 (189-233)||(25297023-25297068)
chr8 (189-233)||(25759043-25759088)
chr8 (177-238)||(27232425-27232485)
chr8 (177-233)||(38534534-38534591)
chr8 (189-229)||(15934060-15934100)
chr8 (189-238)||(29307297-29307347)
chr8 (197-238)||(19330733-19330774)
chr8 (189-225)||(45558317-45558353)
[»] chr4 (23 HSPs)
chr4 (60-175)||(19462202-19462318)
chr4 (189-238)||(7185207-7185256)
chr4 (189-238)||(15212956-15213005)
chr4 (189-238)||(49072519-49072568)
chr4 (189-238)||(13589465-13589514)
chr4 (177-238)||(30231832-30231893)
chr4 (177-238)||(37956356-37956417)
chr4 (177-238)||(41916128-41916189)
chr4 (177-238)||(14902085-14902148)
chr4 (189-238)||(10375336-10375385)
chr4 (189-238)||(27961830-27961879)
chr4 (189-238)||(47467718-47467767)
chr4 (176-231)||(18277242-18277297)
chr4 (176-222)||(54362609-54362655)
chr4 (189-238)||(10236665-10236713)
chr4 (177-238)||(18235582-18235643)
chr4 (189-238)||(19560190-19560238)
chr4 (176-229)||(41255704-41255757)
chr4 (169-238)||(50219321-50219389)
chr4 (189-231)||(15012634-15012676)
chr4 (189-238)||(18493455-18493505)
chr4 (189-223)||(38765522-38765556)
chr4 (176-229)||(13438391-13438443)
[»] chr6 (29 HSPs)
chr6 (177-238)||(33537696-33537757)
chr6 (189-238)||(17082520-17082569)
chr6 (189-238)||(18506728-18506777)
chr6 (187-238)||(17547048-17547099)
chr6 (187-229)||(19171394-19171436)
chr6 (193-238)||(15004289-15004334)
chr6 (189-238)||(21932039-21932088)
chr6 (189-238)||(22848868-22848917)
chr6 (189-238)||(25654991-25655040)
chr6 (189-238)||(32352828-32352877)
chr6 (177-238)||(18628914-18628977)
chr6 (177-233)||(23223589-23223645)
chr6 (179-232)||(116438-116491)
chr6 (189-238)||(15079088-15079137)
chr6 (189-238)||(15889109-15889158)
chr6 (189-238)||(22461490-22461539)
chr6 (189-238)||(33325549-33325598)
chr6 (189-229)||(29157850-29157890)
chr6 (191-226)||(16887204-16887239)
chr6 (197-238)||(4176988-4177029)
chr6 (189-238)||(22582140-22582189)
chr6 (189-238)||(22584930-22584979)
chr6 (189-238)||(22589761-22589810)
chr6 (189-238)||(35135354-35135403)
chr6 (190-238)||(14128961-14129008)
chr6 (177-229)||(31466925-31466976)
chr6 (177-238)||(14153111-14153172)
chr6 (189-226)||(34967675-34967712)
chr6 (189-229)||(21265744-21265784)
[»] scaffold0149 (1 HSPs)
scaffold0149 (177-238)||(32729-32790)
[»] scaffold0022 (1 HSPs)
scaffold0022 (177-238)||(67344-67405)
[»] scaffold0012 (1 HSPs)
scaffold0012 (176-229)||(180255-180308)
[»] chr7 (29 HSPs)
chr7 (177-238)||(45146191-45146252)
chr7 (189-238)||(33560474-33560523)
chr7 (189-233)||(45150395-45150439)
chr7 (189-238)||(9723198-9723247)
chr7 (177-238)||(21675107-21675168)
chr7 (189-229)||(31502032-31502072)
chr7 (189-231)||(16914325-16914367)
chr7 (192-238)||(20582955-20583001)
chr7 (177-238)||(13275633-13275694)
chr7 (189-238)||(13352785-13352834)
chr7 (189-238)||(17923314-17923363)
chr7 (177-238)||(18078879-18078940)
chr7 (169-238)||(34240525-34240593)
chr7 (177-231)||(8562695-8562749)
chr7 (189-238)||(14268244-14268294)
chr7 (180-238)||(44304378-44304436)
chr7 (177-238)||(49047004-49047066)
chr7 (189-238)||(9251266-9251315)
chr7 (190-231)||(48357452-48357493)
chr7 (175-231)||(9612175-9612231)
chr7 (175-231)||(9839746-9839802)
chr7 (189-229)||(14935990-14936029)
chr7 (189-229)||(15363583-15363622)
chr7 (178-228)||(39285560-39285610)
chr7 (189-238)||(4485553-4485601)
chr7 (189-238)||(9318934-9318983)
chr7 (189-238)||(18150673-18150722)
chr7 (189-238)||(46474773-46474822)
chr7 (177-229)||(21537172-21537223)
[»] chr5 (23 HSPs)
chr5 (177-238)||(3674743-3674804)
chr5 (173-238)||(11762852-11762916)
chr5 (177-238)||(11966135-11966196)
chr5 (177-238)||(21215796-21215857)
chr5 (189-238)||(37984224-37984273)
chr5 (189-233)||(21110581-21110625)
chr5 (189-232)||(3420370-3420413)
chr5 (197-238)||(5621168-5621209)
chr5 (176-233)||(16596355-16596412)
chr5 (177-238)||(19349892-19349953)
chr5 (189-238)||(23467312-23467361)
chr5 (177-229)||(22886428-22886480)
chr5 (190-238)||(23233905-23233953)
chr5 (189-238)||(26559193-26559244)
chr5 (176-231)||(7729307-7729362)
chr5 (187-233)||(19874567-19874613)
chr5 (176-238)||(23418100-23418162)
chr5 (190-238)||(22662029-22662078)
chr5 (189-229)||(6457465-6457505)
chr5 (197-233)||(32965067-32965103)
chr5 (189-228)||(433320-433359)
chr5 (189-228)||(16834692-16834731)
chr5 (189-238)||(24084693-24084741)
[»] chr3 (36 HSPs)
chr3 (189-238)||(39657401-39657450)
chr3 (189-238)||(14081353-14081402)
chr3 (189-238)||(38375063-38375112)
chr3 (189-238)||(38810331-38810380)
chr3 (175-238)||(11060314-11060377)
chr3 (188-230)||(13311445-13311487)
chr3 (189-238)||(4161592-4161640)
chr3 (189-230)||(13300790-13300831)
chr3 (189-238)||(17758064-17758113)
chr3 (189-238)||(19059384-19059433)
chr3 (197-238)||(21166455-21166496)
chr3 (177-238)||(25103346-25103406)
chr3 (189-238)||(31411034-31411083)
chr3 (189-238)||(40940003-40940052)
chr3 (189-229)||(17586275-17586315)
chr3 (189-231)||(33368328-33368370)
chr3 (189-238)||(6224445-6224493)
chr3 (189-234)||(6713217-6713262)
chr3 (189-238)||(8605675-8605723)
chr3 (189-238)||(17140367-17140416)
chr3 (189-229)||(18970754-18970795)
chr3 (189-238)||(43426908-43426956)
chr3 (175-238)||(9150171-9150235)
chr3 (202-238)||(10913716-10913752)
chr3 (189-233)||(55193517-55193561)
chr3 (189-231)||(15521827-15521870)
chr3 (189-228)||(47784082-47784121)
chr3 (190-229)||(54652263-54652302)
chr3 (189-238)||(12487118-12487168)
chr3 (197-238)||(34560656-34560697)
chr3 (177-238)||(47984762-47984822)
chr3 (177-238)||(47994049-47994109)
chr3 (177-238)||(48003336-48003396)
chr3 (177-238)||(48012622-48012682)
chr3 (189-233)||(11403438-11403482)
chr3 (190-238)||(12559562-12559610)
[»] scaffold0561 (1 HSPs)
scaffold0561 (177-233)||(2302-2358)
[»] scaffold0095 (1 HSPs)
scaffold0095 (177-233)||(33034-33090)
[»] chr1 (15 HSPs)
chr1 (177-233)||(19603974-19604030)
chr1 (177-238)||(16646792-16646853)
chr1 (189-233)||(22828763-22828807)
chr1 (175-238)||(36355596-36355659)
chr1 (177-233)||(38033009-38033065)
chr1 (189-231)||(17609737-17609779)
chr1 (189-238)||(33398149-33398198)
chr1 (189-229)||(52401438-52401478)
chr1 (189-238)||(8537320-8537367)
chr1 (189-238)||(8602559-8602606)
chr1 (189-235)||(18851788-18851833)
chr1 (189-238)||(5470361-5470410)
chr1 (189-238)||(5767565-5767614)
chr1 (189-226)||(22142693-22142730)
chr1 (192-228)||(21195812-21195848)
[»] chr2 (16 HSPs)
chr2 (177-232)||(19433138-19433193)
chr2 (189-235)||(24885524-24885570)
chr2 (189-230)||(68858-68899)
chr2 (189-238)||(723245-723294)
chr2 (189-238)||(19660758-19660807)
chr2 (189-238)||(19667404-19667453)
chr2 (189-233)||(6095488-6095532)
chr2 (189-233)||(9638239-9638283)
chr2 (177-229)||(24278599-24278651)
chr2 (177-233)||(25595856-25595911)
chr2 (189-238)||(43646717-43646764)
chr2 (189-238)||(16292192-16292241)
chr2 (189-238)||(22579219-22579271)
chr2 (179-228)||(7322396-7322445)
chr2 (189-226)||(24293864-24293901)
chr2 (189-232)||(16446611-16446654)
[»] scaffold0057 (1 HSPs)
scaffold0057 (189-233)||(6678-6722)
[»] scaffold0610 (1 HSPs)
scaffold0610 (188-238)||(9431-9481)
[»] scaffold0006 (1 HSPs)
scaffold0006 (189-231)||(196649-196691)
[»] scaffold0406 (1 HSPs)
scaffold0406 (189-238)||(14841-14890)
[»] scaffold0342 (1 HSPs)
scaffold0342 (189-238)||(13146-13195)
[»] scaffold0049 (1 HSPs)
scaffold0049 (177-238)||(32779-32840)
[»] scaffold0025 (1 HSPs)
scaffold0025 (177-238)||(86361-86422)
[»] scaffold0123 (1 HSPs)
scaffold0123 (189-229)||(11762-11802)
[»] scaffold0193 (1 HSPs)
scaffold0193 (189-232)||(5407-5450)
[»] scaffold0010 (1 HSPs)
scaffold0010 (177-231)||(31855-31909)
[»] scaffold0385 (1 HSPs)
scaffold0385 (189-238)||(11996-12044)
[»] scaffold0357 (1 HSPs)
scaffold0357 (189-238)||(7216-7265)
[»] scaffold0315 (1 HSPs)
scaffold0315 (189-238)||(11871-11920)
[»] scaffold0231 (1 HSPs)
scaffold0231 (189-238)||(12059-12108)
[»] scaffold0165 (1 HSPs)
scaffold0165 (189-238)||(30791-30840)
[»] scaffold0058 (1 HSPs)
scaffold0058 (177-238)||(69644-69705)
[»] scaffold0013 (1 HSPs)
scaffold0013 (189-238)||(6446-6495)
[»] scaffold0634 (1 HSPs)
scaffold0634 (197-229)||(6255-6287)
[»] scaffold0130 (1 HSPs)
scaffold0130 (197-229)||(26372-26404)
[»] scaffold0808 (1 HSPs)
scaffold0808 (191-238)||(1637-1683)
[»] scaffold0151 (1 HSPs)
scaffold0151 (189-228)||(21734-21773)
[»] scaffold0026 (1 HSPs)
scaffold0026 (189-228)||(89210-89249)
[»] scaffold1092 (1 HSPs)
scaffold1092 (177-238)||(2502-2561)
[»] scaffold0387 (1 HSPs)
scaffold0387 (189-238)||(325-375)
[»] scaffold0047 (1 HSPs)
scaffold0047 (177-226)||(19290-19340)
[»] scaffold0032 (1 HSPs)
scaffold0032 (189-238)||(103939-103989)
[»] scaffold0004 (1 HSPs)
scaffold0004 (189-231)||(87190-87232)
[»] scaffold0700 (1 HSPs)
scaffold0700 (174-231)||(3334-3391)
[»] scaffold0669 (1 HSPs)
scaffold0669 (189-229)||(2874-2912)
[»] scaffold0483 (1 HSPs)
scaffold0483 (177-238)||(7493-7554)
[»] scaffold0205 (1 HSPs)
scaffold0205 (189-238)||(8769-8818)
[»] scaffold0162 (1 HSPs)
scaffold0162 (189-238)||(6395-6444)
[»] scaffold0153 (1 HSPs)
scaffold0153 (193-238)||(9296-9340)
[»] scaffold0017 (1 HSPs)
scaffold0017 (189-222)||(13646-13679)
[»] scaffold0001 (1 HSPs)
scaffold0001 (189-238)||(83997-84046)
[»] scaffold0218 (1 HSPs)
scaffold0218 (187-223)||(27152-27188)


Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 45464329 - 45464545
Alignment:
Q  18 gtcttatcatgctttgacaggtttaaggtttggcannnnnnnatacttgttgcaatataaatcatgttatcgtaatactaacatttt-gttggtgttttg 116  Q
    |||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  45464329 gtcttatcatgctttgacaggtttaaggtttggcatttttgtatacttgttgtaatataaatcatgttatcgtaatactaacatttttgttggtgttttg 45464428  T
Q  117 ttgccagcccctttgaacacaaatcccacatccgaacttgagagaattgtcaatgatctctgtaacagttcaattttcgctagatttatttttaattgtt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  45464429 ttgccagcccctttgaacacaaatcccacatccgaacttgagagaattgtcaatgatctctgtaacagcccaattttcgctagatttatttttaattgtt 45464528  T
Q  217 ttaatatgtgtttatat 233  Q
    |||||||||||||||||    
T  45464529 ttaatatgtgtttatat 45464545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 33610371 - 33610420
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33610371 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 33610420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 23223336 - 23223387
Alignment:
Q  187 caattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23223336 caattttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 23223387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 39446072 - 39446128
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  39446072 tgtaacagcccaattttcgctagatttatttttaattgttttattatgtgtttatat 39446128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 24968659 - 24968714
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  24968659 tgtaacagctcgattttcgctagatttatttt-aattgttttaatatgtgtttatat 24968714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 31590865 - 31590821
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  31590865 attttcgctagaattatttttaattgttttaatatgtgtttatat 31590821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 23351078 - 23351035
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttata 232  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  23351078 attttcgctagatttatttttaattgttttaatatgtggttata 23351035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 18040916 - 18040978
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||  | |||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  18040916 ctgtaacagcccgattttcgctagaattatttttaattgttttaatatgtatttatatgtgct 18040978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 22735207 - 22735256
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  22735207 attttcgttagatttatttttaattgttttattatgtgtttatatgtgct 22735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 23159084 - 23159035
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  23159084 attttcgttagatttatttttaattgttttattatgtgtttatatgtgct 23159035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 23218729 - 23218681
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  23218729 attttcgctagatt-atttttaattgttttaatatgtgtttatatgtgct 23218681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 33173076 - 33173027
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  33173076 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgct 33173027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 22496605 - 22496657
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||| ||||||    
T  22496605 tgtaacagtccgattttcgctagaattatttttaattgttttaatacgtgttt 22496657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24908660 - 24908616
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  24908660 attttcgttagatttatttttaattattttaatatgtgtttatat 24908616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24910881 - 24910837
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  24910881 attttcgttagatttatttttaattattttaatatgtgtttatat 24910837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 33529334 - 33529290
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  33529334 attttcgctatatttatttataattgttttaatatgtgtttatat 33529290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 17503038 - 17502988
Alignment:
Q  187 caattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  17503038 caattttcgctagatttatttttaattg-tttaatatgtgtttttatgtgct 17502988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 22745594 - 22745543
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgt 227  Q
    |||||||||  | ||||||||||||||||||||||||||||||| |||||||    
T  22745594 ctgtaacagcccgattttcgctagatttatttttaattgttttattatgtgt 22745543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 5855461 - 5855419
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  5855461 atttttgctagatttatttttaattgttttattatgtgtttat 5855419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 20175139 - 20175197
Alignment:
Q  180 aacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| || |||||||||||||||| ||| |||||||||||| ||||||||| ||||||    
T  20175139 aacagctcgattttcgctagatttaatttcaattgttttaatgtgtgtttatttatgct 20175197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 20219866 - 20219924
Alignment:
Q  180 aacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| || |||||||||||||||| ||| |||||||||||| ||||||||| ||||||    
T  20219866 aacagctcgattttcgctagatttaatttcaattgttttaatgtgtgtttatttatgct 20219924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 26012341 - 26012299
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  26012341 attttcgttagatttatttttaattgttttattatgtgtttat 26012299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 37651814 - 37651867
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||    
T  37651814 tgtaacagttcgattttcgttagattta-ttttaattgttttattatgtgtttat 37651867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 22314959 - 22314910
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||||||| |||||||||||||||| ||||||||| ||||||    
T  22314959 atttttgctagatttaattttaattgttttaatgtgtgtttatttatgct 22314910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 22723999 - 22723950
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  22723999 attttcgctagacttatttttaattattttaatatgtgtttgtatgtgct 22723950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 24240464 - 24240416
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  24240464 attttcgctagatttatttt-aattgttttaatatgtgtttttatgtgct 24240416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25297068 - 25297023
Alignment:
Q  189 attttcgctagatttattttt-aattgttttaatatgtgtttatat 233  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  25297068 attttcgctagatttattttttaattgttttattatgtgtttatat 25297023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25759088 - 25759043
Alignment:
Q  189 attttcgctagatttattttt-aattgttttaatatgtgtttatat 233  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  25759088 attttcgctagatttattttttaattgttttattatgtgtttatat 25759043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 27232425 - 27232485
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  |||||||| ||||||||||||||||||| |||||||||||||| ||| ||||    
T  27232425 tgtaacagcccaattttcactagatttatttttaattg-tttaatatgtgtttttatgtgct 27232485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 38534591 - 38534534
Alignment:
Q  177 tgtaacagttcaattttcgctagatttattttt-aattgttttaatatgtgtttatat 233  Q
    ||||||||| | ||||| ||||||||||||||| |||||||||| |||||||||||||    
T  38534591 tgtaacagtccgatttttgctagatttattttttaattgttttattatgtgtttatat 38534534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 15934100 - 15934060
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  15934100 attttcgctagatttatttttaattattttattatgtgttt 15934060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 29307347 - 29307297
Alignment:
Q  189 attttcgctagatttattttt-aattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||| ||||    
T  29307347 attttcgttagatttattttttaattgttttaatatttgtttatatgtgct 29307297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 19330733 - 19330774
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||| |||||||||||||||||||||||| ||| ||||    
T  19330733 tagatttagttttaattgttttaatatgtgtttctatgtgct 19330774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 45558317 - 45558353
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgt 225  Q
    |||||||||| | ||||||||||||||||||||||||    
T  45558317 attttcgctataattatttttaattgttttaatatgt 45558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 19462202 - 19462318
Alignment:
Q  60 atacttgttgcaatataaatcatgttatcgtaatactaacatttt-gttggtgttttgttgccagcccctttgaacacaaatcccacatccgaacttgag 158  Q
    ||||||| || |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  19462202 atacttgctgtaatataaatcatgttatcgtaatactgacatttttgttggtgttttgttgctagcccctttgaacccaaatcccacatccgaacttgag 19462301  T
Q  159 agaattgtcaatgatct 175  Q
    ||  |||||||||||||    
T  19462302 agggttgtcaatgatct 19462318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 7185207 - 7185256
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7185207 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 7185256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 15212956 - 15213005
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15212956 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 15213005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 49072568 - 49072519
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49072568 attttcgctagatttatttttaattgttttaatatgtgtttatatctgct 49072519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 13589465 - 13589514
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  13589465 attttcgctagaattatttttaattgttttaatatgtgtttatatgtgct 13589514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 30231832 - 30231893
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  30231832 tgtaacagtccgattttcactagatttatttttaattgttttattatgtgtttatatgtgct 30231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 37956356 - 37956417
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  37956356 tgtaacagcccaatttttgctagatttatttttaattgttttaatacgtgtttatatgtgct 37956417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 41916128 - 41916189
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | ||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  41916128 tgtaacagtccgatttttgctagaattatttttaattgttttaatatgtgtttatatgtgct 41916189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 14902148 - 14902085
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttt--taattgttttaatatgtgtttatatatgct 238  Q
    |||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  14902148 tgtaacagctcgattttcgctagatttattttattaattgttttaatatgtgtttatatgtgct 14902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 10375385 - 10375336
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  10375385 attttcgttagaattatttttaattgttttaatatgtgtttatatgtgct 10375336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 27961879 - 27961830
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  27961879 atttttgctagatttatttttaattgttttattatgtgtttatatgtgct 27961830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 47467718 - 47467767
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  47467718 attttcgctagaattatttttaattgttttaatatgtgtttttatgtgct 47467767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 18277297 - 18277242
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    |||||||||  | ||||| ||||||||||||||||||||||||| |||||||||||    
T  18277297 ctgtaacagcccgatttttgctagatttatttttaattgttttattatgtgtttat 18277242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 54362609 - 54362655
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaata 222  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||    
T  54362609 ctgtaacagcccaattttcgctagatttatttttaattattttaata 54362655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 10236665 - 10236713
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  10236665 attttcgttagatttatttt-aattgttttaatatgtgtttatttatgct 10236713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 18235582 - 18235643
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||| | |||||||||| ||||||  |||||||||||||||||| |||||||||| ||||    
T  18235582 tgtaacggctcaattttcgatagattattttttaattgttttaatacgtgtttatatgtgct 18235643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 19560238 - 19560190
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  19560238 attttcgctagatt-atttttaattgttttaatatgtatttatatgtgct 19560190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 41255704 - 41255757
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||  | ||||||| ||||||||||||||||||||| |||||||||||    
T  41255704 ctgtaacagcccgattttcgttagatttatttttaattgtttaaatatgtgttt 41255757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 50219321 - 50219389
Alignment:
Q  169 atgatctctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||| ||||||||| || | |||||||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  50219321 atgagctctgtaactgtccgattttcgctagaattatttt-aattgttttaatacgtgtttatatgtgct 50219389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 15012634 - 15012676
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  15012634 attttcgttagatttatttttaattgtttaaatatgtttttat 15012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 18493455 - 18493505
Alignment:
Q  189 attttcgctagatttatttttaatt-gttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||| ||||    
T  18493455 attttcgctagatttatttttaattacttttattatgtgtttatatgtgct 18493505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 38765556 - 38765522
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatat 223  Q
    |||||||||| ||||||||||||||||||||||||    
T  38765556 attttcgctacatttatttttaattgttttaatat 38765522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 13438391 - 13438443
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||| ||| | |||||||||||| ||||||| ||||||||||||||||||||    
T  13438391 ctgtaatagtccgattttcgctagaattatttt-aattgttttaatatgtgttt 13438443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 33537696 - 33537757
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33537696 tgtaacagttcgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 33537757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 17082520 - 17082569
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17082520 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 17082569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 18506728 - 18506777
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18506728 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 18506777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 17547048 - 17547099
Alignment:
Q  187 caattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  17547048 caattttcgctagatttatttttaattgttttaatatgtgcttatatgtgct 17547099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 19171436 - 19171394
Alignment:
Q  187 caattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19171436 caattttcgctagatttatttttaattgttttaatatgtgttt 19171394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 15004289 - 15004334
Alignment:
Q  193 tcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  15004289 tcgctagatttatttttaattgttttaatatgtgtttatatgtgct 15004334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 21932088 - 21932039
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  21932088 atttttgctagatttatttttaattgttttaatatgtgtttatatgtgct 21932039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 22848917 - 22848868
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22848917 attttcgttagatttatttttaattgttttaatatgtgtttatatgtgct 22848868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 25655040 - 25654991
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  25655040 atttttgctagatttatttttaattgttttaatatgtgtttatatgtgct 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 32352877 - 32352828
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32352877 attttcgctatatttatttttaattgttttaatatgtgtttatatgtgct 32352828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 18628914 - 18628977
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttt--taattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  18628914 tgtaacagcccaattttcgctagatttatttttttaattgttttaatatgtgtttatatgtgct 18628977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 23223645 - 23223589
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  23223645 tgtaacagcccaattttcgttagaattatttttaattgttttaatatgtgtttatat 23223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 116438 - 116491
Alignment:
Q  179 taacagttcaattttcgctagatttatttttaattgttttaatatgtgtttata 232  Q
    |||||| || |||||||||||| ||||||||||||||||||||| |||||||||    
T  116438 taacagctcgattttcgctagaattatttttaattgttttaatacgtgtttata 116491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 15079088 - 15079137
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  15079088 attttcgctagatttatttttaattgttttattatgtggttatatgtgct 15079137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 15889109 - 15889158
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  15889109 attttcgttagaattatttttaattgttttaatatgtgtgtatatatgct 15889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 22461490 - 22461539
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  22461490 attttcgctagaattatttttaatcgttttaatatgtgtttatatgtgct 22461539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 33325598 - 33325549
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  33325598 attttcgctagatttatttttatttgttttattatgtgtttatatgtgct 33325549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 29157850 - 29157890
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  29157850 attttcgctagaattatttttaattgttttaatatgtgttt 29157890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 16887204 - 16887239
Alignment:
Q  191 tttcgctagatttatttttaattgttttaatatgtg 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  16887204 tttcgctagatttatttttaattgttttaatatgtg 16887239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 4176988 - 4177029
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  4176988 tagatttatttttaattgtttttatgtgtgtttatatatgct 4177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 22582140 - 22582189
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||| ||||    
T  22582140 attttcgctagatttattcttaattcttttaatatgtgtttttatgtgct 22582189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 22584930 - 22584979
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||| ||||    
T  22584930 attttcgctagatttattcttaattcttttaatatgtgtttttatgtgct 22584979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 22589761 - 22589810
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||| ||||    
T  22589761 attttcgctagatttattcttaattcttttaatatgtgtttttatgtgct 22589810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 35135354 - 35135403
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||| ||||    
T  35135354 attttcgttagatttatttttatttgttttattatgtgtttatatgtgct 35135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 14129008 - 14128961
Alignment:
Q  190 ttttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||||    
T  14129008 tttttgctagatttatttttaattg-tttaatatgtgtttctatatgct 14128961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 31466925 - 31466976
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||||| | ||||||| |||||||||||||||||| ||||||||||||||    
T  31466925 tgtaacagtccgattttcgttagatttatttttaattg-tttaatatgtgttt 31466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 14153172 - 14153111
Alignment:
Q  177 tgtaacagttcaatttt-cgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| ||||||| || |||||||||||||||||| ||||||| |||||| ||||||||    
T  14153172 tgtaacagtccaatttttcgttagatttatttttaattg-tttaataagtgtttttatatgct 14153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 34967712 - 34967675
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtg 226  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  34967712 attttcgctagaattattttcaattgttttaatatgtg 34967675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 21265784 - 21265744
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||| |||||||||||||||||| | |||||||    
T  21265784 attttcgctagagttatttttaattgttttattgtgtgttt 21265744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 32729 - 32790
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32729 tgtaacagtccgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 32790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 67344 - 67405
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  67344 tgtaacagtccgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 67405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 180255 - 180308
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  180255 ctgtaacagttcgattttcgctagatttatttttaattgttttaatatgtgttt 180308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 45146252 - 45146191
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45146252 tgtaatagttcgattttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 45146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 33560523 - 33560474
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33560523 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 33560474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 45150439 - 45150395
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45150439 attttcgctagatttatttttaattgttttaatatgtgtttatat 45150395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 9723198 - 9723247
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  9723198 attttcgctagaattatttttaattgttttaatatgtgtttatatgtgct 9723247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 21675107 - 21675168
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  21675107 tgtaacagcccaattttcgctagaattatttttaattgttttaatgtgtgtttatatgtgct 21675168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 31502072 - 31502032
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31502072 attttcgctagatttatttttaattgttttaatatgtgttt 31502032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 16914325 - 16914367
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  16914325 attttcgctagatttatttttaattgttttattatgtgtttat 16914367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 20582955 - 20583001
Alignment:
Q  192 ttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20582955 ttcgctagatttatttttaattgttttaatatgtgtttttatgtgct 20583001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 13275694 - 13275633
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||| || |||||||||||||||||||||||||||||   ||||||||||||| ||||    
T  13275694 tgtaacagctcgattttcgctagatttatttttaattgtttatttatgtgtttatatgtgct 13275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 13352834 - 13352785
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  13352834 atttttgctagatttatttttaattgttttaatatttgtttatatgtgct 13352785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 17923363 - 17923314
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  17923363 attttcgctagatttaattttaattgttttaatgtgtgtttatttatgct 17923314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 18078879 - 18078940
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||| || |||||||||||| ||||||||||||||||| || ||||||||| ||||||    
T  18078879 tgtaacagctcgattttcgctagaattatttttaattgtttttatgtgtgtttatttatgct 18078940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 34240525 - 34240593
Alignment:
Q  169 atgatctctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||  ||||||||| ||| |||||||| |||||||||||||||||||||||| ||||    
T  34240525 atgatctgtgtaacagcccaattttcgttagttttatttt-aattgttttaatatgtgtttatatgtgct 34240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 8562695 - 8562749
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||| |||||||||||| ||||| |||||||| ||||||| |||||||||    
T  8562695 tgtaacagtccaattttcgctaaatttaattttaatttttttaatgtgtgtttat 8562749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 14268244 - 14268294
Alignment:
Q  189 attttcgctagatttatttt-taattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  14268244 attttcgttagatttattttttaattgttttaatatgtgtttatatgtgct 14268294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 44304378 - 44304436
Alignment:
Q  180 aacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| || |||||||||||||||| ||| |||||||||||| ||||||||| ||||||    
T  44304378 aacagctcgattttcgctagatttaatttcaattgttttaatgtgtgtttatttatgct 44304436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 49047004 - 49047066
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttt-taattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  ||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  49047004 tgtaacagcccaatttttgctagatttattttttaattgttttattatgtgtttatatgtgct 49047066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 9251315 - 9251266
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||| ||||    
T  9251315 attttcgctagaattatttttaattgttttaatatatgtttttatgtgct 9251266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 48357493 - 48357452
Alignment:
Q  190 ttttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  48357493 ttttcgctagatttatttttaatcgttttattatgtgtttat 48357452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 9612231 - 9612175
Alignment:
Q  175 tctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||||  | ||||||| |||||||||||||||||| |||| |||||||||||    
T  9612231 tctgtaacagcccgattttcgttagatttatttttaattgctttattatgtgtttat 9612175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 9839802 - 9839746
Alignment:
Q  175 tctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||||  | ||||||| |||||||||||||||||| |||| |||||||||||    
T  9839802 tctgtaacagcccgattttcgttagatttatttttaattgctttattatgtgtttat 9839746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 14936029 - 14935990
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  14936029 attttcgctagatttatttt-aattgttttaatatgtgttt 14935990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 15363622 - 15363583
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  15363622 attttcgctagatttatttt-aattgttttaatatgtgttt 15363583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 39285560 - 39285610
Alignment:
Q  178 gtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    |||||||| | ||||||||| ||  ||||||||||||||||||||||||||    
T  39285560 gtaacagtccgattttcgctggaaatatttttaattgttttaatatgtgtt 39285610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 4485601 - 4485553
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  4485601 attttcgctagatttgttttaaattgtttt-atatgtgtttttatatgct 4485553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 9318934 - 9318983
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||| |||||||||||||||||||||| ||||| ||| ||||    
T  9318934 attttagctagaattatttttaattgttttaatatatgtttttatgtgct 9318983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 18150673 - 18150722
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||| |||| |||||||||||||| | ||||||||| ||||||    
T  18150673 attttcgctagttttaattttaattgttttattgtgtgtttatttatgct 18150722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 46474822 - 46474773
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||| | ||||||||| ||||||||| |||||||||||| ||||    
T  46474822 attttcgctataattatttttagttgttttaacatgtgtttatatgtgct 46474773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 21537172 - 21537223
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||| || |||||||||||||||| |||||||| |||| ||||||||||    
T  21537172 tgtaacagctcgattttcgctagattta-ttttaattattttcatatgtgttt 21537223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 3674804 - 3674743
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  3674804 tgtaacagtccgattttcgctagatttatttttaattgttttattatgtgtttatatgtgct 3674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 11762852 - 11762916
Alignment:
Q  173 tctctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  11762852 tctctgtaacagtccaattttcgctagattta-ttttaattgttttaatatgtgtttctatgtgct 11762916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 11966196 - 11966135
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  11966196 tgtaacagtccgattttcactagaattatttttaattgttttaatatgtgtttatatgtgct 11966135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 21215796 - 21215857
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21215796 tgtaacagcccaaatttcgctagatttatttttaattgttttaatatgtgtttttatgtgct 21215857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 37984273 - 37984224
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  37984273 attttcgctagatttatttttaattgtttaaatatgtgtttatatgtgct 37984224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 21110625 - 21110581
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  21110625 attttcgctagatttatttttaattgttttattatgtgtttatat 21110581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 3420370 - 3420413
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttata 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  3420370 attttcactagatttatttttaattgttttaatatgtgtttata 3420413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 5621168 - 5621209
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  5621168 tagatttatttttaattgttttaatatgtgtttatatgtgct 5621209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 16596412 - 16596355
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||| | ||||| ||||||||||||||||| |||||||||| ||||||||||    
T  16596412 ctgtaacagtccgatttttgctagatttatttttaactgttttaatacgtgtttatat 16596355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 19349953 - 19349892
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||| || |||||||||||||||||||| |||||||||| |||| |||||||| ||||    
T  19349953 tgtaacagctcgattttcgctagatttattttgaattgttttattatgagtttatatgtgct 19349892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 23467361 - 23467312
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  23467361 attttcgttagatttatttttaattgttttattatgtgtttatatgtgct 23467312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 22886480 - 22886428
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||||  ||||||||| |||||||||||||||| ||||||||||||||||    
T  22886480 tgtaacagcccaattttcgttagatttatttttaatggttttaatatgtgttt 22886428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 23233905 - 23233953
Alignment:
Q  190 ttttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  23233905 ttttcgttagaattatttttaattgttttaatatgtgtttatatgtgct 23233953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 26559193 - 26559244
Alignment:
Q  189 attttcgctagatttatttttaattgtttta--atatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  26559193 attttcgctagatttatttttaattgttttaatatatgtgtttatatgtgct 26559244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 7729362 - 7729307
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    |||||||||  ||||||||||||||||||||||||||| ||||| | |||||||||    
T  7729362 ctgtaacagcccaattttcgctagatttatttttaattattttattgtgtgtttat 7729307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 19874613 - 19874567
Alignment:
Q  187 caattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  19874613 caattttcgctggaattatttttaattattttaatatgtgtttatat 19874567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 23418162 - 23418100
Alignment:
Q  176 ctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||  | ||||| |||| | |||||||||||||||||||||||||||||||| ||||    
T  23418162 ctgtaacagcccgatttttgctaaaattatttttaattgttttaatatgtgtttatatgtgct 23418100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 22662029 - 22662078
Alignment:
Q  190 ttttcgctagatttatttt-taattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  22662029 ttttcgctagatttattttttaattgttttattatgtgtttatatgtgct 22662078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 6457505 - 6457465
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  6457505 attttcgttagaattatttttaattgttttaatatgtgttt 6457465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 32965067 - 32965103
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32965067 tagatttatttttaattgttttaataagtgtttatat 32965103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 433359 - 433320
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  433359 attttcgctagatttatttttaattgttttattacgtgtt 433320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 16834692 - 16834731
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  16834692 attttcgctagaaatatttttaattgttttaatatgtgtt 16834731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 24084741 - 24084693
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| ||||    
T  24084741 attttcgctagatttatttt-aattattttattatgtgtttatatgtgct 24084693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 39657450 - 39657401
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39657450 attttcgctagatttatttttaattgttttaatatgtgtttatatgtgct 39657401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 14081402 - 14081353
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  14081402 attttcgctagatttatttttaattgttttattatgtgtttatatgtgct 14081353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 38375063 - 38375112
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  38375063 attttcgctagaattatttttaattgttttaatatgtgtttatatgtgct 38375112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 38810331 - 38810380
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  38810331 attttcgttagatttatttttaattgttttattatgtgtttatatatgct 38810380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 11060314 - 11060377
Alignment:
Q  175 tctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||  | |||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  11060314 tctgtaacagcccgattttcactagatttatttttaattgttttattatgtgtttatatgtgct 11060377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 13311445 - 13311487
Alignment:
Q  188 aattttcgctagatttatttttaattgttttaatatgtgttta 230  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  13311445 aatttttgctagatttatttttaattgttttaatatgtgttta 13311487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 4161592 - 4161640
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4161592 attttcgctagatttatttt-aattgttttaatatgtgtttttatatgct 4161640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 13300790 - 13300831
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttta 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  13300790 atttttgctagatttatttttaattgttttaatatgtgttta 13300831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 17758064 - 17758113
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  17758064 atttttgctagaattatttttaattgttttaatatgtgtttatatgtgct 17758113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 19059384 - 19059433
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  19059384 atttttgctagaattatttttaattgttttaatatgtgtttatatgtgct 19059433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 21166455 - 21166496
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  21166455 tagatttatttttaattgttttaatatgtgtttatatgtgct 21166496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 25103346 - 25103406
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  25103346 tgtaacagtccgattttcgctagatttatttt-aattgttttaatatgtgtttttatgtgct 25103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 31411034 - 31411083
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  31411034 atttttgctagaattatttttaattgttttaatatgtgtttatatgtgct 31411083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 40940052 - 40940003
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  40940052 attttcactagatttatttttaattgttttattatgtgtttatatgtgct 40940003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 17586275 - 17586315
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  17586275 attttcgctagaattatttttaattgttttaatatgtgttt 17586315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 33368328 - 33368370
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  33368328 attttcgttagatttatttttaattgttttattatgtgtttat 33368370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 6224445 - 6224493
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  6224445 attttcactagatttatttt-aattgttttaatatgtgtttttatatgct 6224493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 6713217 - 6713262
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatata 234  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||    
T  6713217 atttccgctaaatttatttttaattgttttgatatgtgtttatata 6713262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 8605723 - 8605675
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  8605723 attttcgctagatttatttt-aattgttttaatatgtgtttttatgtgct 8605675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 17140416 - 17140367
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||| ||||    
T  17140416 atttttgctatatttatttttaattgttttattatgtgtttatatttgct 17140367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 18970795 - 18970754
Alignment:
Q  189 attttcgctagatttattttt-aattgttttaatatgtgttt 229  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  18970795 attttcgctagatttattttttaattgttttaatatgtgttt 18970754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 43426908 - 43426956
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  43426908 attttcgctagaattatttttaattg-tttaatatgtgtttatatgtgct 43426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 9150235 - 9150171
Alignment:
Q  175 tctgtaacagttcaattttcgctagatttattttt-aattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||  ||||||| |||| | |||||||| |||||||||||||||||||||||| ||||    
T  9150235 tctgtaacagcccaatttttgctaaaattattttttaattgttttaatatgtgtttatatgtgct 9150171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 10913752 - 10913716
Alignment:
Q  202 ttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10913752 ttatttttaattgttttaatatgtgtttacatatgct 10913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 55193561 - 55193517
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||    
T  55193561 attttcgcaagatttatttttaatcgttttattatgtgtttatat 55193517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 15521870 - 15521827
Alignment:
Q  189 attttcgctagatttattttt-aattgttttaatatgtgtttat 231  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  15521870 attttcgctagatttattttttaattgttttaatatgcgtttat 15521827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 47784082 - 47784121
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  47784082 attttcgctagatttatttttaattgttttattacgtgtt 47784121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 54652302 - 54652263
Alignment:
Q  190 ttttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  54652302 ttttcactagatttatttttaattgttttattatgtgttt 54652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 12487118 - 12487168
Alignment:
Q  189 attttcgctagatttatttttaattg-ttttaatatgtgtttatatatgct 238  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||| ||||    
T  12487118 atttttgctagatttatttttaattgtttttattatgtgtttatatgtgct 12487168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 34560697 - 34560656
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||    
T  34560697 tagatttatttttaattgttttattatgtgtttttatgtgct 34560656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 47984822 - 47984762
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||| ||||| |||||||||| ||||||| ||||||||||||||| ||||    
T  47984822 tgtaacagtccgatttccgctatatttattttttattgttt-aatatgtgtttatatgtgct 47984762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 47994109 - 47994049
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||| ||||| |||||||||| ||||||| ||||||||||||||| ||||    
T  47994109 tgtaacagtccgatttccgctatatttattttttattgttt-aatatgtgtttatatgtgct 47994049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 48003396 - 48003336
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||| ||||| |||||||||| ||||||| ||||||||||||||| ||||    
T  48003396 tgtaacagtccgatttccgctatatttattttttattgttt-aatatgtgtttatatgtgct 48003336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 48012682 - 48012622
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||| ||||| |||||||||| ||||||| ||||||||||||||| ||||    
T  48012682 tgtaacagtccgatttccgctatatttattttttattgttt-aatatgtgtttatatgtgct 48012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 11403482 - 11403438
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||||||| |||||||||||  ||||||| |||||||||    
T  11403482 attttcgctagattaatttttaattgccttaatatatgtttatat 11403438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 12559562 - 12559610
Alignment:
Q  190 ttttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||| | || ||||| ||||||||||||| ||||    
T  12559562 ttttcgctagatttattttaattttttttattatgtgtttatatgtgct 12559610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 2302 - 2358
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  2302 tgtaacagcccaattttcgctagaattatttttaattgttttaatatgtgtttatat 2358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 33034 - 33090
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33034 tgtaacagcccaattttcgctagatttatttttaattgttttattatgtgtttatat 33090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 19604030 - 19603974
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  19604030 tgtaacagtccgattttcgctagatttatttttaattgttttattatgtgtttatat 19603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 16646853 - 16646792
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  16646853 tgtaacagtccgattttccctagatttatttttaattattttaatatgtgtttatatgtgct 16646792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22828763 - 22828807
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  22828763 attttcgctagatttatttttaattgttttattatgtgtttatat 22828807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 36355596 - 36355659
Alignment:
Q  175 tctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||  | ||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  36355596 tctgtaacagcccgattttcgctagatttatttttaattgttttaatacatgtttatatgtgct 36355659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 38033009 - 38033065
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||| | |||||||||| |||||||||||||||||||| || ||||||||||    
T  38033009 tgtaacagtccgattttcgctaaatttatttttaattgttttagtacgtgtttatat 38033065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 17609779 - 17609737
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  17609779 attttcgcgagatttatttttaattgttttattatgtgtttat 17609737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 33398198 - 33398149
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||| ||||    
T  33398198 attttcgctagaattattcttaattgttttaatatgtgtatatatgtgct 33398149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 52401478 - 52401438
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  52401478 attttcgttagatttatttttaattgttttgatatgtgttt 52401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 8537320 - 8537367
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||||||||||||||  |||||||||||| ||||    
T  8537320 attttcgttagatttatttttaattgtttta--atgtgtttatatgtgct 8537367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 8602559 - 8602606
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||||||||||||||  |||||||||||| ||||    
T  8602559 attttcgttagatttatttttaattgtttta--atgtgtttatatgtgct 8602606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 18851788 - 18851833
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatat 235  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||    
T  18851788 attttcgctagaattatttttaattg-ttcaatatgtgtttatatat 18851833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 5470361 - 5470410
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||| || |||||||||||||||||||||| ||||| ||| ||||    
T  5470361 attttcgctggagttatttttaattgttttaatatatgtttttatgtgct 5470410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 5767565 - 5767614
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||| ||||||| ||||||||||||| |||||||||| ||||    
T  5767565 atttttgctagaattattttaaattgttttaataagtgtttatatgtgct 5767614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 22142693 - 22142730
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtg 226  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  22142693 attttcgttagatttatttttaattgttttattatgtg 22142730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 21195848 - 21195812
Alignment:
Q  192 ttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  21195848 ttcgttagatttatttttaattgttttattatgtgtt 21195812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 19433138 - 19433193
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttata 232  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  19433138 tgtaacagttcgattttcgctagatttatttttaattgttttattatgtgcttata 19433193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 24885570 - 24885524
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatat 235  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24885570 attttcgctagatttatttttaattgttttattatgtgtttatatat 24885524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 68899 - 68858
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttta 230  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  68899 attttcgctagatttatttttaattgttttattatgtgttta 68858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 723294 - 723245
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||| || |||||||||| ||||    
T  723294 attttcgctagatttatttttaattgttttattacgtgtttatatgtgct 723245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 19660807 - 19660758
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  19660807 attttcgctagatttatttttaattgttttaatatgcatttatatgtgct 19660758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 19667453 - 19667404
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  19667453 attttcgctagatttatttttacttgttttaatatgtgcttatatgtgct 19667404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 6095532 - 6095488
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  6095532 attttcgctagaattattttaaattgttttaatatgtgtttatat 6095488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 9638283 - 9638239
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    |||||||||| | ||||||||||||||||||||||||||||||||    
T  9638283 attttcgctaaaattatttttaattgttttaatatgtgtttatat 9638239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 24278651 - 24278599
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||| ||| ||||||||| || ||||||||||||||||||||||||||||    
T  24278651 tgtaacaattcgattttcgcttgaattatttttaattgttttaatatgtgttt 24278599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 25595911 - 25595856
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||||  |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  25595911 tgtaacagcccaattttcgctagaattatttt-aattgttttaatatgtgtttatat 25595856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 43646764 - 43646717
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  43646764 attttcgctagatttatttttaattgtttta--atgtgtttatatgtgct 43646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 16292192 - 16292241
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||| ||||    
T  16292192 attttcgctagatttattttcaattgttttaacatgtgtttttatgtgct 16292241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 22579219 - 22579271
Alignment:
Q  189 attttcgctagatttatttt---taattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||   ||||||||||| ||||||||||||| ||||    
T  22579219 attttcgctagatttattttttttaattgttttattatgtgtttatatgtgct 22579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 7322445 - 7322396
Alignment:
Q  179 taacagttcaattttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    |||||| || |||||||||||||||| |||||||||||||| || |||||    
T  7322445 taacagctcgattttcgctagatttaattttaattgttttattacgtgtt 7322396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 24293864 - 24293901
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtg 226  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  24293864 attttcgttagatttatttttaattgtttttatatgtg 24293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 16446654 - 16446611
Alignment:
Q  189 attttcgctagatttatttttaa-ttgttttaatatgtgtttata 232  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  16446654 attttcgctagatttatttttaaattgtttta-tatgtgtttata 16446611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 6722 - 6678
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatat 233  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  6722 attttcgatagatttatttttaattgttttaatatgtgtttatat 6678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 9431 - 9481
Alignment:
Q  188 aattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  9431 aattttcgctagatttatttttatttgttttattatgtgtttatatgtgct 9481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 196649 - 196691
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  196649 attttcgctagatttatttttaattgttttattatgtgtttat 196691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 14890 - 14841
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  14890 attttcgctagaattttttttaattgttttaatatgtgtttatatgtgct 14841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 13195 - 13146
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  13195 attttcgctagatttatttctaattgttttaatacgtgtttatatgtgct 13146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 32779 - 32840
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| ||| ||||||||| |||| ||||||||||||| |||||||||||||||||| ||||    
T  32779 tgtaagagtccaattttcggtagaattatttttaattgatttaatatgtgtttatatgtgct 32840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 86422 - 86361
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  ||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||    
T  86422 tgtaacagcccaattttcgttagatttatttttaattgttttattatgtgtttttatgtgct 86361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 11802 - 11762
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  11802 attttcgctagatttatttttaattgttttattatgtgttt 11762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 5450 - 5407
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttata 232  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  5450 attttcgttagatttatttttaattgttttaatacgtgtttata 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 31909 - 31855
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    ||||||| | ||||||||||||||||||||||||||| ||||| | |||||||||    
T  31909 tgtaacaatccaattttcgctagatttatttttaattattttattgtgtgtttat 31855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 11996 - 12044
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  11996 attttcgctagatt-atttttaattgttttaatatgtctttatatgtgct 12044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 7265 - 7216
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||| ||||    
T  7265 attttcgctagagttatttttaattgttttattatgtgtttttatgtgct 7216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 11871 - 11920
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||||||||||||| || ||||||||| ||||||    
T  11871 attttcgttagatttatttttaattgtttttatgtgtgtttatttatgct 11920  T

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Target: scaffold0231 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 12059 - 12108
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||| ||||    
T  12059 attttcgttagatttatttttaattgttttaatacgtgttgatatgtgct 12108  T

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Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 30840 - 30791
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||| ||||    
T  30840 atttttgctagattaatttttaattgttttaatatgtgtttttatgtgct 30791  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 69644 - 69705
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||| ||| |||||| |||||||||||||| ||||||||| |||||| |||||| ||||    
T  69644 tgtaacaattcgattttctctagatttatttttcattgttttattatgtggttatatgtgct 69705  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 6446 - 6495
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||||||||| || ||||||| | ||||||    
T  6446 attttcgctagatttatttttaattgtttttatgtgtgtttgtttatgct 6495  T

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Target: scaffold0634 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 6287 - 6255
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||||||||||||||||    
T  6287 tagatttatttttaattgttttaatatgtgttt 6255  T

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Target: scaffold0130 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 26372 - 26404
Alignment:
Q  197 tagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||||||||||||||||    
T  26372 tagatttatttttaattgttttaatatgtgttt 26404  T

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Target: scaffold0808 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 1637 - 1683
Alignment:
Q  191 tttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  1637 tttcgctagatttatttttaattg-tttattatgtgtttatatgtgct 1683  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 21734 - 21773
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  21734 atttttgctagatttatttttaattgttttaataggtgtt 21773  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 89210 - 89249
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtt 228  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  89210 attttcgctagatttatttttaattgttttattacgtgtt 89249  T

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Target: scaffold1092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 2502 - 2561
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||||| |||||||||| |||   |||||||||||||| ||||||||||||| ||||    
T  2502 tgtaacagttcgattttcgctaaatta--ttttaattgttttattatgtgtttatatgtgct 2561  T

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Target: scaffold0387 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 325 - 375
Alignment:
Q  189 attttcgctagatttatttt-taattgttttaatatgtgtttatatatgct 238  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||| ||||    
T  325 attttcgttagatttattttttaattgttttaatatgtgtttctatgtgct 375  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 19290 - 19340
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaa-ttgttttaatatgtg 226  Q
    ||||||||| | ||||||||||||||||||||||| ||||||| |||||||    
T  19290 tgtaacagtccgattttcgctagatttatttttaatttgttttcatatgtg 19340  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 103939 - 103989
Alignment:
Q  189 attttcgctagattta-tttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  103939 attttcgctagatttattttttaattattttaataagtgtttatatgtgct 103989  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 87232 - 87190
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    |||||||||||| |||||||||||||||||||| ||| |||||    
T  87232 attttcgctagaattatttttaattgttttaatgtgtttttat 87190  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 3391 - 3334
Alignment:
Q  174 ctctgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttat 231  Q
    |||||||||||  | ||||||| ||||| |||||||||||| |||| |||||||||||    
T  3391 ctctgtaacagcccgattttcgttagatctatttttaattggtttattatgtgtttat 3334  T

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Target: scaffold0669 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 2874 - 2912
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgttt 229  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  2874 attttcgctagatttatttttaattgttt--atatgtgttt 2912  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 7554 - 7493
Alignment:
Q  177 tgtaacagttcaattttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||||||  ||||||||| ||||||||||||||||| |||||   ||||||||| ||||||    
T  7554 tgtaacagcccaattttcgttagatttatttttaattattttacggtgtgtttatttatgct 7493  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 8818 - 8769
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||||||||||||||||| ||||| | || ||||||||| ||||||    
T  8818 attttcgctagatttatttttatttgttattatgtgtgtttatttatgct 8769  T

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Target: scaffold0162 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 6395 - 6444
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||| | ||||||||||||| |||||| ||||||||||||| ||||    
T  6395 attttcgccaaatttatttttaatagttttattatgtgtttatatgtgct 6444  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 9340 - 9296
Alignment:
Q  193 tcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  9340 tcgctagaattatttt-aattgttttaatatgtgtttatatgtgct 9296  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 13679 - 13646
Alignment:
Q  189 attttcgctagatttatttttaattgttttaata 222  Q
    ||||| ||||||||||||||||||||||||||||    
T  13679 atttttgctagatttatttttaattgttttaata 13646  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 83997 - 84046
Alignment:
Q  189 attttcgctagatttatttttaattgttttaatatgtgtttatatatgct 238  Q
    ||||| |||| ||||| |||||||||||||||| ||||||||| ||||||    
T  83997 atttttgctatatttaattttaattgttttaatgtgtgtttatttatgct 84046  T

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Target: scaffold0218 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 27188 - 27152
Alignment:
Q  187 caattttcgctagatttatttttaattgttttaatat 223  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  27188 caattttcgctagatttaattttaattgtttttatat 27152  T

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