View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3538_high_39 (Length: 237)
Name: NF3538_high_39
Description: NF3538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3538_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 42973757 - 42973979
Alignment:
| Q |
2 |
cattttgaacttgtatacatgttaatacgtaaatgctcaaaatacttcaagtttttcatctgagagtatgttatcatggaaacatcacaggagagatttc |
101 |
Q |
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| T |
42973757 |
cattttgaacttgtatacattttaatacgtaaatgctcaaaatactttaagtttttcatctgagagtatgttatcatggaaacatcacaggagagatttc |
42973856 |
T |
|
| Q |
102 |
tcgtaacaactttactatgttatctcattgtattattagcacatcttgcgctttttatttgtgatcatatacgaaattaggtgacagtttcggtctgatc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
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| T |
42973857 |
tcgtaacaactttactatgttatctcattgtattattagcacatcttgcgctttttatttgtgaacatatacgaaattaggtgatagtttcggtctgatc |
42973956 |
T |
|
| Q |
202 |
tttcctagatatgaaactagtga |
224 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
42973957 |
tttcctagatatgaaactagtga |
42973979 |
T |
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