View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3539_low_42 (Length: 250)

Name: NF3539_low_42
Description: NF3539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3539_low_42
NF3539_low_42
[»] chr8 (29 HSPs)
chr8 (16-106)||(7319220-7319310)
chr8 (111-165)||(22534722-22534776)
chr8 (111-165)||(4182627-4182681)
chr8 (111-165)||(10717126-10717180)
chr8 (111-165)||(10718448-10718502)
chr8 (111-165)||(22270948-22271002)
chr8 (111-165)||(22272270-22272324)
chr8 (111-165)||(36588227-36588281)
chr8 (111-165)||(38456730-38456784)
chr8 (111-165)||(38658486-38658540)
chr8 (109-165)||(1376938-1376994)
chr8 (109-165)||(1385555-1385611)
chr8 (111-163)||(45517962-45518014)
chr8 (111-165)||(22533322-22533376)
chr8 (111-165)||(28996839-28996893)
chr8 (111-165)||(28997993-28998047)
chr8 (111-161)||(3483638-3483688)
chr8 (111-165)||(4183979-4184033)
chr8 (111-165)||(30124223-30124277)
chr8 (111-165)||(34904509-34904563)
chr8 (111-161)||(41847184-41847234)
chr8 (111-165)||(297119-297172)
chr8 (111-161)||(1420446-1420496)
chr8 (111-165)||(14197830-14197884)
chr8 (111-165)||(38455452-38455506)
chr8 (111-161)||(39440426-39440476)
chr8 (111-165)||(45516402-45516456)
chr8 (209-250)||(22534637-22534678)
chr8 (109-165)||(3030399-3030455)
[»] chr6 (21 HSPs)
chr6 (111-165)||(34998141-34998195)
chr6 (111-165)||(20393268-20393322)
chr6 (111-165)||(21953211-21953265)
chr6 (111-165)||(34995119-34995173)
chr6 (111-165)||(20391219-20391273)
chr6 (111-165)||(20897497-20897551)
chr6 (111-165)||(21165251-21165305)
chr6 (111-161)||(1974156-1974206)
chr6 (111-165)||(16995456-16995510)
chr6 (111-165)||(18810537-18810591)
chr6 (111-161)||(1171655-1171705)
chr6 (111-165)||(1972405-1972459)
chr6 (111-165)||(3276372-3276426)
chr6 (111-165)||(3279499-3279553)
chr6 (111-165)||(17517309-17517363)
chr6 (111-161)||(29291364-29291414)
chr6 (220-250)||(17000192-17000222)
chr6 (111-161)||(17000281-17000331)
chr6 (111-161)||(17516167-17516217)
chr6 (111-153)||(20895963-20896005)
chr6 (119-165)||(26421843-26421889)
[»] chr4 (29 HSPs)
chr4 (111-165)||(17371845-17371899)
chr4 (111-165)||(3879091-3879145)
chr4 (113-165)||(45618292-45618344)
chr4 (111-165)||(33137228-33137282)
chr4 (111-165)||(17281576-17281630)
chr4 (111-165)||(17370078-17370132)
chr4 (111-165)||(19674419-19674473)
chr4 (111-165)||(22204060-22204114)
chr4 (111-165)||(42359346-42359400)
chr4 (125-165)||(40198593-40198633)
chr4 (111-165)||(3880496-3880550)
chr4 (111-161)||(19675624-19675674)
chr4 (111-153)||(32698004-32698046)
chr4 (111-157)||(35054667-35054713)
chr4 (111-165)||(54121700-54121754)
chr4 (111-164)||(16573383-16573436)
chr4 (111-160)||(32699319-32699368)
chr4 (109-165)||(17326734-17326790)
chr4 (111-147)||(47360950-47360986)
chr4 (111-158)||(41933823-41933870)
chr4 (99-157)||(41935078-41935137)
chr4 (111-165)||(16574368-16574422)
chr4 (111-165)||(29060882-29060936)
chr4 (111-161)||(34659711-34659761)
chr4 (111-165)||(44705304-44705358)
chr4 (111-165)||(45619731-45619785)
chr4 (119-165)||(55542579-55542625)
chr4 (111-156)||(38166500-38166545)
chr4 (129-165)||(47359537-47359573)
[»] scaffold0562 (1 HSPs)
scaffold0562 (111-165)||(9927-9981)
[»] scaffold0001 (2 HSPs)
scaffold0001 (111-165)||(119598-119652)
scaffold0001 (111-165)||(120985-121039)
[»] chr7 (27 HSPs)
chr7 (111-165)||(17066430-17066484)
chr7 (111-165)||(32197909-32197963)
chr7 (111-165)||(41693650-41693704)
chr7 (111-165)||(5610161-5610215)
chr7 (111-165)||(24197103-24197157)
chr7 (111-165)||(31848144-31848198)
chr7 (111-165)||(32544774-32544828)
chr7 (112-165)||(43869912-43869965)
chr7 (111-165)||(11217071-11217125)
chr7 (111-165)||(12385707-12385761)
chr7 (111-165)||(13418955-13419009)
chr7 (111-165)||(24195612-24195666)
chr7 (111-165)||(41694955-41695009)
chr7 (97-165)||(31846977-31847045)
chr7 (111-165)||(5611507-5611561)
chr7 (111-165)||(12933424-12933478)
chr7 (111-165)||(28462628-28462682)
chr7 (111-161)||(32196689-32196739)
chr7 (111-165)||(35212073-35212127)
chr7 (111-165)||(38742186-38742240)
chr7 (111-165)||(40576771-40576825)
chr7 (111-165)||(42254963-42255017)
chr7 (111-158)||(31489942-31489989)
chr7 (125-159)||(554264-554298)
chr7 (111-165)||(32543485-32543539)
chr7 (111-165)||(43066006-43066060)
chr7 (111-156)||(39619800-39619845)
[»] chr2 (24 HSPs)
chr2 (111-165)||(25979251-25979305)
chr2 (111-165)||(1777474-1777528)
chr2 (111-165)||(1778790-1778844)
chr2 (111-165)||(2412428-2412482)
chr2 (119-165)||(20245305-20245351)
chr2 (111-165)||(25977875-25977929)
chr2 (111-165)||(30843649-30843703)
chr2 (111-165)||(8809601-8809656)
chr2 (111-146)||(12068364-12068399)
chr2 (111-165)||(4040216-4040270)
chr2 (111-165)||(11087054-11087108)
chr2 (111-165)||(25283272-25283326)
chr2 (119-165)||(36837778-36837824)
chr2 (209-250)||(24749515-24749556)
chr2 (111-165)||(8810703-8810757)
chr2 (111-165)||(11088680-11088734)
chr2 (111-165)||(19604919-19604973)
chr2 (111-165)||(23861757-23861811)
chr2 (103-152)||(24754171-24754221)
chr2 (220-250)||(25977984-25978014)
chr2 (119-161)||(29794321-29794363)
chr2 (111-165)||(43824168-43824222)
chr2 (111-160)||(12067002-12067051)
chr2 (109-158)||(19603741-19603790)
[»] chr1 (34 HSPs)
chr1 (111-165)||(9774888-9774942)
chr1 (111-165)||(20722477-20722531)
chr1 (111-165)||(46073890-46073944)
chr1 (111-165)||(46075050-46075104)
chr1 (109-165)||(17976764-17976820)
chr1 (109-165)||(17977559-17977615)
chr1 (109-165)||(27816720-27816776)
chr1 (111-165)||(27264216-27264270)
chr1 (100-165)||(27815434-27815500)
chr1 (111-165)||(34934747-34934801)
chr1 (111-165)||(35721106-35721160)
chr1 (111-165)||(35911888-35911942)
chr1 (111-165)||(37395638-37395692)
chr1 (111-165)||(37396840-37396894)
chr1 (111-165)||(11711254-11711307)
chr1 (111-165)||(20723688-20723742)
chr1 (119-165)||(26863873-26863919)
chr1 (111-165)||(27262913-27262967)
chr1 (111-165)||(39163024-39163078)
chr1 (111-165)||(9774042-9774096)
chr1 (111-165)||(11710558-11710612)
chr1 (111-165)||(23469969-23470023)
chr1 (111-165)||(24609924-24609978)
chr1 (111-165)||(30724015-30724069)
chr1 (111-165)||(35722285-35722339)
chr1 (111-165)||(47038871-47038925)
chr1 (111-161)||(48334136-48334186)
chr1 (111-164)||(50164408-50164461)
chr1 (111-155)||(45979506-45979550)
chr1 (111-165)||(24422520-24422574)
chr1 (111-165)||(24427369-24427423)
chr1 (119-165)||(26865184-26865230)
chr1 (111-165)||(30722121-30722175)
chr1 (111-161)||(51240124-51240174)
[»] scaffold0517 (2 HSPs)
scaffold0517 (111-165)||(10320-10374)
scaffold0517 (111-165)||(11522-11576)
[»] scaffold0002 (4 HSPs)
scaffold0002 (111-165)||(345897-345951)
scaffold0002 (111-165)||(374340-374394)
scaffold0002 (111-165)||(344942-344996)
scaffold0002 (111-153)||(376381-376423)
[»] chr5 (17 HSPs)
chr5 (111-165)||(3936583-3936637)
chr5 (111-165)||(3205102-3205156)
chr5 (111-165)||(3954057-3954111)
chr5 (111-165)||(27571129-27571183)
chr5 (111-165)||(31540501-31540555)
chr5 (111-165)||(31541622-31541676)
chr5 (111-160)||(14809168-14809217)
chr5 (111-159)||(15599770-15599818)
chr5 (111-165)||(3938060-3938114)
chr5 (111-165)||(4565398-4565452)
chr5 (215-246)||(14809272-14809303)
chr5 (111-165)||(25254131-25254185)
chr5 (111-165)||(25317921-25317975)
chr5 (111-165)||(34911828-34911882)
chr5 (112-165)||(4778840-4778893)
chr5 (109-165)||(4777643-4777699)
chr5 (111-159)||(27570061-27570109)
[»] chr3 (34 HSPs)
chr3 (111-165)||(976785-976839)
chr3 (111-165)||(4705686-4705740)
chr3 (111-165)||(39820604-39820658)
chr3 (111-165)||(45267310-45267364)
chr3 (111-165)||(47433809-47433863)
chr3 (111-165)||(52403124-52403178)
chr3 (111-165)||(52708617-52708671)
chr3 (111-165)||(11914833-11914887)
chr3 (111-165)||(20488371-20488425)
chr3 (111-161)||(20585648-20585698)
chr3 (111-165)||(45268570-45268624)
chr3 (111-165)||(52401022-52401076)
chr3 (111-165)||(53121307-53121361)
chr3 (111-165)||(54437467-54437521)
chr3 (111-165)||(977846-977900)
chr3 (111-165)||(3416500-3416554)
chr3 (111-165)||(9855183-9855237)
chr3 (111-165)||(20489358-20489412)
chr3 (111-165)||(22508740-22508794)
chr3 (111-165)||(32637188-32637242)
chr3 (111-165)||(40477374-40477428)
chr3 (111-157)||(42446531-42446577)
chr3 (111-165)||(43641148-43641202)
chr3 (111-165)||(46026081-46026135)
chr3 (111-165)||(46027417-46027471)
chr3 (111-165)||(46104348-46104402)
chr3 (111-165)||(48035732-48035786)
chr3 (111-161)||(52707541-52707591)
chr3 (111-159)||(38505585-38505633)
chr3 (111-165)||(39819317-39819371)
chr3 (111-157)||(40476226-40476272)
chr3 (111-165)||(42447787-42447841)
chr3 (132-165)||(32635620-32635653)
chr3 (132-165)||(46106764-46106797)
[»] scaffold0599 (1 HSPs)
scaffold0599 (111-165)||(6584-6638)
[»] scaffold0230 (1 HSPs)
scaffold0230 (111-165)||(431-485)
[»] scaffold0106 (2 HSPs)
scaffold0106 (111-165)||(30907-30961)
scaffold0106 (111-165)||(29734-29788)
[»] scaffold0009 (1 HSPs)
scaffold0009 (111-165)||(202584-202638)
[»] scaffold0765 (1 HSPs)
scaffold0765 (105-165)||(1859-1919)
[»] scaffold0095 (1 HSPs)
scaffold0095 (111-161)||(42759-42809)


Alignment Details
Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 7319310 - 7319220
Alignment:
Q  16 atactccacaacaactaaacttagagctatgaagtctggatacggagtaccagtgcggatgcgaaacgacagagatatgtctaatttttaa 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| || |||||||||| ||||| ||||| |||||||||    
T  7319310 atactccacaacaactaaacttagagctatgaaatctggatacagagtacgagtgtgggtgcgaaacgatagagaaatgtcaaatttttaa 7319220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 22534776 - 22534722
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22534776 aaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaa 22534722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 4182627 - 4182681
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  4182627 aaatatgcttttggtccctgtaaatatagcgaatttgggttttggtccctggtaa 4182681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 10717126 - 10717180
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  10717126 aaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 10717180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 10718502 - 10718448
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  10718502 aaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 10718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 22270948 - 22271002
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  22270948 aaatatgcttttgatccctgcaaatatagcgaatttggattttagtccctggtaa 22271002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 22272324 - 22272270
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  22272324 aaatatgcttttggtccccgcaaatatagcgaatttgggttttggtccctggtaa 22272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 36588227 - 36588281
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  36588227 aaatatgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggtaa 36588281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 38456784 - 38456730
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  38456784 aaatatgcttttggtccctgcaaatatagcaaatttaggttttggtccctggtaa 38456730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 38658486 - 38658540
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||    
T  38658486 aaatatgcttctggtccatgcaaatatagcgaatttgggttttggtccctggtaa 38658540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 1376938 - 1376994
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  1376938 ttaaatatgattttggtccctgcaaatatagccaatttggattttggtccctggtaa 1376994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 1385611 - 1385555
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  1385611 ttaaatatggttttggtccctgcaaatatagccaatttggattttggtccctggtaa 1385555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 45518014 - 45517962
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggt 163  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  45518014 aaatatgcttttggtccctgcaagtatagcgagtttgggttttggtccctggt 45517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 22533322 - 22533376
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||    
T  22533322 aaatatgcttttggtccctgtatatatagcgagtttgggttttggtccctggtaa 22533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 28996839 - 28996893
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  28996839 aaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 28996893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 28998047 - 28997993
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  28998047 aaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctagtaa 28997993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 3483638 - 3483688
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||| |||||||||||||||||| |||| |||||||||||||    
T  3483638 aaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctg 3483688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 4184033 - 4183979
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||  ||||||||||||||| |  ||||||||||||||||||||||    
T  4184033 aaatatgcttttagtccctgcaaatatagtgcgtttgggttttggtccctggtaa 4183979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 30124277 - 30124223
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||| ||| | |||| |||||||||||||||||    
T  30124277 aaatatgcttttggtccctgcaaataaagcaagtttgagttttggtccctggtaa 30124223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 34904563 - 34904509
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  ||||| |||||||||||||||||||||||||| ||||||||    
T  34904563 aaatatgattttagtcccttcaaatatagcgaatttgggttttggttcctggtaa 34904509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 41847234 - 41847184
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||  || |||||||||||||||||||| |||||||||||||    
T  41847234 aaatatgcttttagtctctgcaaatatagcgaatttgagttttggtccctg 41847184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 297172 - 297119
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||| | |||||||||||||||||||||||| ||||| || |||||||    
T  297172 aaatatgctttag-tccctgcaaatatagcgaatttggattttgatctctggtaa 297119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 1420496 - 1420446
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||| |||||||||||||||||| ||||| | ||||||||||    
T  1420496 aaatatgtttttggtccctgcaaatatagcgagtttggatattggtccctg 1420446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 14197830 - 14197884
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| |||| ||||| ||||||||||| ||||    
T  14197830 aaatatgtttttggtccctgcaaatatggcgagtttggattttggtccctagtaa 14197884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 38455452 - 38455506
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||| ||||||||||| ||||||| |||||||||||| ||||    
T  38455452 aaatatgtttttggtccttgcaaatatagtgaatttgagttttggtccctagtaa 38455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 39440476 - 39440426
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||| ||| ||||||||| |||| |||| |||||||||||||    
T  39440476 aaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctg 39440426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 45516402 - 45516456
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  ||| || |||||||||||||||||||||||||| |||||||    
T  45516402 aaatatgtttttagtccatgtaaatatagcgaatttgggttttggtctctggtaa 45516456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 22534678 - 22534637
Alignment:
Q  209 aaaaaggtcattggacccactttcttgctgatttggcacatt 250  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||    
T  22534678 aaaaaagtccttggacccactttcttgctgatttggctcatt 22534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 3030399 - 3030455
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||| |||||||||||||  |  ||||| |||||||| ||||||||    
T  3030399 ttaaatatgcttttggtccctgcaaatatgactcatttgagttttggttcctggtaa 3030455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 34998195 - 34998141
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34998195 aaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaa 34998141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 20393322 - 20393268
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20393322 aaatatgcttttgatccctgcaaatatagcgaatttgggtttcagtccctggtaa 20393268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 21953211 - 21953265
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  21953211 aaatatgcttttggtccctgcaaatatagcgaatttggattttggtccctggtaa 21953265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 34995119 - 34995173
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  34995119 aaatatgcttttgatccctgcaaatatagcgaatttgagttttggttcctggtaa 34995173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 20391219 - 20391273
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  20391219 aaatatgcttttggtccctgcaaatatagtgaatttgggttttggtccctcgtaa 20391273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 20897551 - 20897497
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  20897551 aaatatggttttggtccctgcaaatatagtgaatttgggttttggtccctggtaa 20897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 21165251 - 21165305
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  21165251 aaatatgcttttggtccctgcaaatatagcgagtttgtgttttggtccctggtaa 21165305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 1974206 - 1974156
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  1974206 aaatatgtttttgatccttgcaaatatagcgaatttgagttttggtccctg 1974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 16995456 - 16995510
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||    
T  16995456 aaatatgtttttggtccctgcaaatataaagaatttgggttttggtccctggtaa 16995510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 18810537 - 18810591
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  18810537 aaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 18810591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 1171705 - 1171655
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||||||||    
T  1171705 aaatatgtttttgatccctgcaaatataacgagtttggtttttggtccctg 1171655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 1972405 - 1972459
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||| |||||||||||||||| ||| |||||||    
T  1972405 aaatatgtttttggtccctgcaaataaagcgaatttgggttttagtctctggtaa 1972459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 3276372 - 3276426
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| |||||| ||||    
T  3276372 aaatatgtttttggtccctgcaaatatagcgaatttggattttagtccctagtaa 3276426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 3279553 - 3279499
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||||||| ||||  ||||||| ||||||||    
T  3279553 aaatatgtttttgatccctgcaaatatagcgagtttgaattttggttcctggtaa 3279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 17517363 - 17517309
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| |||| |||| |||||||||||||||||    
T  17517363 aaatatgtttttggtccctgcaaatatggcgagtttgagttttggtccctggtaa 17517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 29291364 - 29291414
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  29291364 aaatatgcttttggtccttgcaaatatggcgagtttgggttttggtccctg 29291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 250
Target Start/End: Complemental strand, 17000222 - 17000192
Alignment:
Q  220 tggacccactttcttgctgatttggcacatt 250  Q
    |||||||||||||||||||||||||||||||    
T  17000222 tggacccactttcttgctgatttggcacatt 17000192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 17000331 - 17000281
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    |||||| |||||| ||||||||||| ||| || ||||||||||||||||||    
T  17000331 aaatatacttttggtccctgcaaatgtagtgagtttgggttttggtccctg 17000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 17516167 - 17516217
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||| ||||||||||||| | || ||||||||||||||||||    
T  17516167 aaatatgtttttggtccctgcaaatatggtgagtttgggttttggtccctg 17516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 20895963 - 20896005
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggtttt 153  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||    
T  20895963 aaatatgtttttggtccctgcaaatatagcgaatttgagtttt 20896005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 26421889 - 26421843
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||| || |||||||||||||||||||| ||||| |||||||||||    
T  26421889 ttttggtctctgcaaatatagcgaatttgagttttagtccctggtaa 26421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 17371899 - 17371845
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17371899 aaatatgcttttgatccctgcaaatataacgaatttgggttttggtccctggtaa 17371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 3879091 - 3879145
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  3879091 aaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggtaa 3879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 45618292 - 45618344
Alignment:
Q  113 atatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45618292 atatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 45618344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 33137282 - 33137228
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  33137282 aaatatgtttttgatccctgcaaatatagcgagtttgggttttagtccctggtaa 33137228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 17281576 - 17281630
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||| |||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  17281576 aaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggtaa 17281630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 17370078 - 17370132
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||| |||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  17370078 aaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggtaa 17370132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 19674419 - 19674473
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||    
T  19674419 aaatatgcttttggtccttgcaaatatagcgagtttgagttttggtccctggtaa 19674473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 22204060 - 22204114
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||    
T  22204060 aaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggtaa 22204114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 42359400 - 42359346
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  42359400 aaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctggtaa 42359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 40198593 - 40198633
Alignment:
Q  125 tccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  40198593 tccctgcaaatatagcgagtttgggttttggtccctggtaa 40198633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 3880550 - 3880496
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| | |||||||||||||||| ||||||||||||||||| ||||    
T  3880550 aaatatgtttttggttcctgcaaatatagcgagtttgggttttggtccctagtaa 3880496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 19675674 - 19675624
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  19675674 aaatatgcttttggtccctgcaaatataacgagtttggattttggtccctg 19675624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 32698004 - 32698046
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggtttt 153  Q
    ||||||| |||||||||||||||||||||||||||| ||||||    
T  32698004 aaatatgattttgatccctgcaaatatagcgaatttaggtttt 32698046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 35054667 - 35054713
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtc 157  Q
    ||||||| ||||  |||||||||||||||||||||||||||||||||    
T  35054667 aaatatgattttagtccctgcaaatatagcgaatttgggttttggtc 35054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 54121754 - 54121700
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||  |||| ||||||||||||||||||||||    
T  54121754 aaatatgattttgctccctgcaaatacggcgagtttgggttttggtccctggtaa 54121700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 16573383 - 16573436
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggta 164  Q
    ||||||||||||| || || ||||||| ||||||||||||||||||| ||||||    
T  16573383 aaatatgcttttggtctctacaaatatggcgaatttgggttttggtctctggta 16573436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 32699368 - 32699319
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccct 160  Q
    ||||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  32699368 aaatatgtttttggtccctgtaaatatagcgagtttgggttttggtccct 32699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 17326790 - 17326734
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||| ||||| ||||||||| | |||||||||||||||||| ||||    
T  17326790 ttaaatatggttttggtccctccaaatatagggcatttgggttttggtccctagtaa 17326734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 47360986 - 47360950
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttg 147  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47360986 aaatatgcttttgatccttgcaaatatagcgaatttg 47360950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 41933823 - 41933870
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtcc 158  Q
    ||||||| ||||| || ||||||||||||||| |||||||||||||||    
T  41933823 aaatatgattttggtctctgcaaatatagcgagtttgggttttggtcc 41933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 41935137 - 41935078
Alignment:
Q  99 atttttaaggttaaa-tatgcttttgatccctgcaaatatagcgaatttgggttttggtc 157  Q
    ||||||||| ||||| |||| ||||| |||||||||||||| ||| ||||||||||||||    
T  41935137 atttttaagattaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 16574422 - 16574368
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  ||||||||||||||||||||||  |||||||||||| ||||    
T  16574422 aaatatgtttttagtccctgcaaatatagcgaatttaagttttggtcccttgtaa 16574368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 29060936 - 29060882
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||| ||||||||||||||||||| ||||  ||||||||| ||||||    
T  29060936 aaatatgtttttaatccctgcaaatatagcgagtttgaattttggtccttggtaa 29060882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 34659711 - 34659761
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||| ||||||||||||| |||| ||  ||||||||||||||    
T  34659711 aaatatgcttttggtccctgcaaatatggcgagttaaggttttggtccctg 34659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 44705304 - 44705358
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| || |||||||||||| |||||||||||||||| ||| ||||    
T  44705304 aaatatgtttttggtctctgcaaatatagtgaatttgggttttggttcctagtaa 44705358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 45619785 - 45619731
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  |||||||||||||||||| ||| ||||||| ||||||||||    
T  45619785 aaatatgtttttagtccctgcaaatatagcgagtttaggttttgttccctggtaa 45619731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 55542625 - 55542579
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||||||||||   |||||| |||||||||||||||    
T  55542625 ttttgatccctgcaaatatagcatgtttgggatttggtccctggtaa 55542579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 38166500 - 38166545
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggt 156  Q
    ||||||| |||| ||||||||||||||||||| ||||| |||||||    
T  38166500 aaatatgtttttaatccctgcaaatatagcgagtttggattttggt 38166545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 47359537 - 47359573
Alignment:
Q  129 tgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  47359537 tgcaaatatagcgaatttgagttttagtccctggtaa 47359573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 9927 - 9981
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  9927 aaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggtaa 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 119598 - 119652
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  119598 aaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccctggtaa 119652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 121039 - 120985
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  121039 aaatatgcttttggtccctgcaaatataacgagtttgggttttggtccctggtaa 120985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 17066430 - 17066484
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  17066430 aaatatgcttttaatccctgcaaatatagcgagtttgggttttggtccctggtaa 17066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 32197963 - 32197909
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  32197963 aaatatgcttttggtccctgcaaatatagcgaatttgggttttggtccttggtaa 32197909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 41693650 - 41693704
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41693650 aaatatgtttttgatccctgcaaatatggcgaatttgggttttggtccctggtaa 41693704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 5610161 - 5610215
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  5610161 aaatatgcttttgatccctgcaaatataacgaatttgggttttagtctctggtaa 5610215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 24197157 - 24197103
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  24197157 aaatatgcttttggtccctgcaaatatagcgaatttgagttttggttcctggtaa 24197103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 31848198 - 31848144
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||    
T  31848198 aaatatgtttttagtccctgcaaatatagcgaatttgggttttggtccctggtaa 31848144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 32544828 - 32544774
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  32544828 aaatatgattttggtccctgcaaatatagcgaatttgggttttggtccttggtaa 32544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 43869965 - 43869912
Alignment:
Q  112 aatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  43869965 aatatggttttggtccctgcaaatatagccaatttgggttttggtccctggtaa 43869912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 11217125 - 11217071
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||    
T  11217125 aaatatgcttttggtccctgcaaatatagcgagtttgaattttggtccctggtaa 11217071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 12385761 - 12385707
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  12385761 aaatatgattttggtccctgcaaatatagcgagtttggattttggtccctggtaa 12385707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 13418955 - 13419009
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  13418955 aaatatgtttttggtccctgcaaatattgcgaatttgggtattggtccctggtaa 13419009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 24195612 - 24195666
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  24195612 aaatatgtttttggtccctgcaaatatagcgagtttgggttttgctccctggtaa 24195666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 41695009 - 41694955
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||    
T  41695009 aaatatgtttttcatccctgcaaatatagcgagtttgagttttggtccctggtaa 41694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 31846977 - 31847045
Alignment:
Q  97 taatttttaaggttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| | | ||||||||||||| |||||||||||||| | ||||||| ||||||| ||||||||    
T  31846977 taatttttaggttaaaatatgcttttggtccctgcaaatatatctaatttggattttggttcctggtaa 31847045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 5611561 - 5611507
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| |||||| ||||    
T  5611561 aaatatgattttggtccctgcaaatatagcgagtttgggttttcgtccctcgtaa 5611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 12933424 - 12933478
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||| || ||||  ||||||||||||||||    
T  12933424 aaatatgcttttggtccctgcaaatatagtgagtttgaattttggtccctggtaa 12933478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 28462682 - 28462628
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| || ||||||||||  ||||||||||||||| ||||||||||    
T  28462682 aaatatgcttttggtctctgcaaatatgacgaatttgggttttgatccctggtaa 28462628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 32196689 - 32196739
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||| ||||||||||||||||| |||||| ||||||||||||    
T  32196689 aaatatgtttttggtccctgcaaatatagcgtatttggattttggtccctg 32196739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 35212073 - 35212127
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||  ||| ||||||||||||||||||||||    
T  35212073 aaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggtaa 35212127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 38742186 - 38742240
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  |||||||||||||||||| |||||||||||||||| |||||    
T  38742186 aaatatgtttttagtccctgcaaatatagcgagtttgggttttggtccccggtaa 38742240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 40576771 - 40576825
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||  ||||||||| |||||||| |||||||    
T  40576771 aaatatgcttttggtccctgcaaatatgacgaatttggattttggtctctggtaa 40576825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 42254963 - 42255017
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||| |||||| |||| |||| |||||||||||||||||    
T  42254963 aaatatgcttttggtccctgtaaatatggcgagtttgagttttggtccctggtaa 42255017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 31489989 - 31489942
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtcc 158  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||||    
T  31489989 aaatatgtttttggtccctgcaaatataacgagtttgggttttggtcc 31489942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 554264 - 554298
Alignment:
Q  125 tccctgcaaatatagcgaatttgggttttggtccc 159  Q
    |||||||||||||||||| ||||||||||||||||    
T  554264 tccctgcaaatatagcgagtttgggttttggtccc 554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 32543485 - 32543539
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||| ||| ||||||    
T  32543485 aaatatgcttttggtccctacaaatatagcaagtttgggttttgatccttggtaa 32543539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 43066006 - 43066060
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||| ||||||||||||||||||| |||| |||||||| | ||||||    
T  43066006 aaatatgttttttatccctgcaaatatagcgagtttgagttttggttcttggtaa 43066060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 39619845 - 39619800
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggt 156  Q
    ||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  39619845 aaatatgcttttggtccatgcaaatatggcgagtttgggttttggt 39619800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 25979305 - 25979251
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  25979305 aaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctggtaa 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 1777474 - 1777528
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||    
T  1777474 aaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctggtaa 1777528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 1778844 - 1778790
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||    
T  1778844 aaatatgcttttggttcctgcaaatatagcgactttgggttttggtccttggtaa 1778790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 2412482 - 2412428
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||    
T  2412482 aaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggtaa 2412428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 20245351 - 20245305
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  20245351 ttttgattcctgcaaatatagcgaatttgggttttagtccctggtaa 20245305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 25977875 - 25977929
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  25977875 aaatatgtttttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 25977929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 30843649 - 30843703
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||    
T  30843649 aaatatgcttttaatcactgcaaatataacgagtttgggttttggtccctggtaa 30843703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 8809601 - 8809656
Alignment:
Q  111 aaatatgcttttgatccct-gcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  8809601 aaatatgtttttggtcccttgcaaatataacgaatttgggttttggtccctggtaa 8809656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 12068399 - 12068364
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaattt 146  Q
    ||||||||||||||||||||||||||||||||||||    
T  12068399 aaatatgcttttgatccctgcaaatatagcgaattt 12068364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 4040270 - 4040216
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  4040270 aaatatgattttggtccctgcaaatatagagaatttaggttttgctccctggtaa 4040216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 11087054 - 11087108
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||| ||||||||||||||||||| ||||| ||||||||| ||||||    
T  11087054 aaatatgattttaatccctgcaaatatagcgagtttggcttttggtccttggtaa 11087108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 25283326 - 25283272
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| || |||||||||||||||||||| |||||| ||||||||||    
T  25283326 aaatatgtttttggtcactgcaaatatagcgaatttgagttttgatccctggtaa 25283272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 36837824 - 36837778
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||    
T  36837824 ttttggtctctgcaaatatagcgagtttgggttttggtccctggtaa 36837778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 24749556 - 24749515
Alignment:
Q  209 aaaaaggtcattggacccactttcttgctgatttggcacatt 250  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  24749556 aaaacggtccttggacccactttcttgctgatttggcacatt 24749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 8810757 - 8810703
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| || ||||||||||||||||||||| ||||  ||||||||||    
T  8810757 aaatatgtttttggtctctgcaaatatagcgaatttggattttaatccctggtaa 8810703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 11088734 - 11088680
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  ||| ||||||||||||||||||| |||||||| ||||||||    
T  11088734 aaatatgtttttcgtccatgcaaatatagcgaatttgagttttggttcctggtaa 11088680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 19604973 - 19604919
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||| |||||| ||  |||||||||||||||||||||||    
T  19604973 aaatatgtttttggtccctgtaaatatggctcatttgggttttggtccctggtaa 19604919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 23861757 - 23861811
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| | || ||||| ||||||||||||||||    
T  23861757 aaatatgtttttggtccctgcaaatatggagagtttggattttggtccctggtaa 23861811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 24754221 - 24754171
Alignment:
Q  103 ttaaggttaaa-tatgcttttgatccctgcaaatatagcgaatttgggttt 152  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||||||||||||    
T  24754221 ttaaggttaaaatatgtttttggtccctgcaaatatggcgaatttgggttt 24754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 250
Target Start/End: Original strand, 25977984 - 25978014
Alignment:
Q  220 tggacccactttcttgctgatttggcacatt 250  Q
    |||||||||||||||||||||||||||||||    
T  25977984 tggacccactttcttgctgatttggcacatt 25978014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 29794363 - 29794321
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||    
T  29794363 ttttggtccctgcaaatatagcgaatttgagttttggttcctg 29794321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 43824168 - 43824222
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  |||||||||||||||| |||||| |||||||||||| ||||    
T  43824168 aaatatgtttttcgtccctgcaaatatagcaaatttgagttttggtccctagtaa 43824222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12067002 - 12067051
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccct 160  Q
    ||||||| ||||| ||||| |||||||| |||||||| ||||||||||||    
T  12067002 aaatatgtttttggtccctacaaatataacgaatttgagttttggtccct 12067051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 19603741 - 19603790
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtcc 158  Q
    ||||||||| ||||| |||||||||||||| |  ||||||||||||||||    
T  19603741 ttaaatatgtttttggtccctgcaaatataactcatttgggttttggtcc 19603790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 9774942 - 9774888
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  9774942 aaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 9774888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 20722477 - 20722531
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20722477 aaatgtgcttttggtccctgcaaatatagcgaatttgggttttggtccctggtaa 20722531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 46073890 - 46073944
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  46073890 aaatatgcttttgatccctgcaaatatagcaaatttgggttttagtccctggtaa 46073944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 46075104 - 46075050
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  46075104 aaatatgtttttgatccctgcaaatatagcgagtttgggttttggtccctggtaa 46075050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 17976764 - 17976820
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  17976764 ttaaatatggttttggttcctgcaaatatagcgaatttgggttttggtccctggtaa 17976820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 17977615 - 17977559
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  17977615 ttaaatatggttttggtccctgcaaatatagcgaatttgggttttggtccttggtaa 17977559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 27816776 - 27816720
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  27816776 ttaaatatggttttggtccctgcaaatatagccaatttgggttttggtccctggtaa 27816720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 27264270 - 27264216
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  27264270 aaatatgattttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 27264216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 27815434 - 27815500
Alignment:
Q  100 tttttaagg-ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||| ||||||||| || || |||||||||||||||| ||||||||||||||||||||||||    
T  27815434 tttttaaggcttaaatatggttctggtccctgcaaatatagccaatttgggttttggtccctggtaa 27815500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 34934801 - 34934747
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  34934801 aaatatgctttttgtccctgcaaatatagcgaatttgggttttggtccttggtaa 34934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 35721106 - 35721160
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  35721106 aaatatgtttttggtccctgcaaatataacgaatttgggttttggtccctggtaa 35721160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 35911942 - 35911888
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  35911942 aaatatgcttttggtccctgcaaatatagcgaatttggattttggtccttggtaa 35911888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 37395638 - 37395692
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  37395638 aaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggtaa 37395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 37396894 - 37396840
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  37396894 aaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaa 37396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 11711307 - 11711254
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  11711307 aaatatgtttttggtccctgcaaatatagcgaatttggg-tttggtccctggtaa 11711254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 20723742 - 20723688
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  20723742 aaatatgtttttggtccctgcaaatatagcgaatttgagttttagtccctggtaa 20723688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 26863873 - 26863919
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  26863873 ttttggtccctgcaaatatagcgaatttgagttttggtccctggtaa 26863919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 27262913 - 27262967
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||    
T  27262913 aaatatgtttttggtccctgcaaatatagcgagtttgtgttttggtccctggtaa 27262967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 39163078 - 39163024
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||    
T  39163078 aaatatgcttttggtccctgcaaatatggcgaggttgggttttggtccctggtaa 39163024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 9774042 - 9774096
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||| ||| |||| |||||||||||||||||    
T  9774042 aaatatgtttttggtccctgcaaatataacgagtttgagttttggtccctggtaa 9774096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 11710558 - 11710612
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||| ||||||| |||  |||||||||||||||||||||    
T  11710558 aaatatgtttttgatccctgtaaatataacgaggttgggttttggtccctggtaa 11710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 23470023 - 23469969
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||| ||||||| ||||||||||    
T  23470023 aaatatgtttttggtccctgcaaatatagcgagtttcggttttgatccctggtaa 23469969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 24609924 - 24609978
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||||| ||||    
T  24609924 aaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctagtaa 24609978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 30724069 - 30724015
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||  |||||||||||||| | |||||| |||||||||||||||||    
T  30724069 aaatatgcttttcgtccctgcaaatataacaaatttgagttttggtccctggtaa 30724015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 35722339 - 35722285
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  35722339 aaatatgtttttggtccctgtaaatatagcgaatttggattttggtctctggtaa 35722285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 47038871 - 47038925
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  |||||||||||||||| | ||||||||||||||||||||||    
T  47038871 aaatatgtttttagtccctgcaaatatagctagtttgggttttggtccctggtaa 47038925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 48334186 - 48334136
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||    
T  48334186 aaatatgcttttggtccctacaaatatagcgaatttgagttttggttcctg 48334136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 50164408 - 50164461
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggta 164  Q
    ||||||||||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  50164408 aaatatgcttttggtccctgcaaatatggcgagtttgagttttggtccttggta 50164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 45979550 - 45979506
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttgg 155  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||    
T  45979550 aaatatgtttttggtccctgcaaatatagcgaatttgagttttgg 45979506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 24422520 - 24422574
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||| |||||||| ||| |||| ||||| ||||||||||    
T  24422520 aaatatgcttttggtccctgtaaatatagtgaagttggattttgatccctggtaa 24422574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 24427423 - 24427369
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||| |||||||||||| |||| ||||| |||||||||||    
T  24427423 aaatatgtttttggtccctacaaatatagcgagtttgagttttagtccctggtaa 24427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 26865230 - 26865184
Alignment:
Q  119 ttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||| || ||||||||||||||||||||| |||| |||||||||||    
T  26865230 ttttggtctctgcaaatatagcgaatttggattttagtccctggtaa 26865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 30722121 - 30722175
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||| |||||||| |||||||| | ||||| ||||||||| ||||||    
T  30722121 aaatatgcttttaatccctgcgaatatagcaagtttggattttggtccttggtaa 30722175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 51240124 - 51240174
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||| || ||||||||||||||||||||| ||||| ||||||    
T  51240124 aaatatgtttttggtctctgcaaatatagcgaatttggattttgatccctg 51240174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 10320 - 10374
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  10320 aaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaa 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 11576 - 11522
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11576 aaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggtaa 11522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 345951 - 345897
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  345951 aaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctagtaa 345897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 374340 - 374394
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  374340 aaatatgattttgatccctgcaaatatagcgagtttgggttttggtcccttgtaa 374394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 344942 - 344996
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  344942 aaatatgattttggtccctgcaaatatggcgagtttgggttttggtccctggtaa 344996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 376423 - 376381
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggtttt 153  Q
    ||||||||||||| |||||||||||||||||| ||||||||||    
T  376423 aaatatgcttttggtccctgcaaatatagcgagtttgggtttt 376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 3936583 - 3936637
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  3936583 aaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 3936637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 3205156 - 3205102
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||||||||||||||||||||||||   || ||||||||||||||||||||||    
T  3205156 aaatatgcttttgatccctgcaaatatgatgagtttgggttttggtccctggtaa 3205102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 3954057 - 3954111
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  3954057 aaatatgtttttggtccttgcaaatatatcgaatttgggttttggtccctggtaa 3954111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 27571183 - 27571129
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  27571183 aaatatgattttggtccctgcaaatatagcgagtttgggttttgatccctggtaa 27571129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 31540501 - 31540555
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  31540501 aaatatgtttttggtccctgcaaatataacgaatttgggttttggtacctggtaa 31540555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 31541676 - 31541622
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||| ||||||| |||||| |||||||||||    
T  31541676 aaatatgtttttgatccctgcaaatataacgaattttggtttttgtccctggtaa 31541622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 14809168 - 14809217
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccct 160  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  14809168 aaatatgtttttgatccctacaaatatagcgaatttggattttggtccct 14809217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 15599770 - 15599818
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccc 159  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  15599770 aaatatgcttttggtccctacaaatatggcgaatttgggttttggtccc 15599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 3938114 - 3938060
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||  |||||||||||||||| | ||| ||||||||||||||||||    
T  3938114 aaatatgcttttagtccctgcaaatatagcaagtttaggttttggtccctggtaa 3938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 4565398 - 4565452
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  4565398 aaatatgtttttagtccctacaaatatagcgagtttgggttttggtccctggtaa 4565452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 246
Target Start/End: Original strand, 14809272 - 14809303
Alignment:
Q  215 gtcattggacccactttcttgctgatttggca 246  Q
    ||||||||||||||||||||||||||||||||    
T  14809272 gtcattggacccactttcttgctgatttggca 14809303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 25254185 - 25254131
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||  || |||| |||||| ||||||||||    
T  25254185 aaatatgcttttggtccctgcaaatatatagagtttgagttttgatccctggtaa 25254131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 25317975 - 25317921
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||||  || |||| |||||| ||||||||||    
T  25317975 aaatatgcttttggtccctgcaaatatatagagtttgagttttgatccctggtaa 25317921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 34911882 - 34911828
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||| ||||| ||||    
T  34911882 aaatatgattttggtccctgcaaatatagcgagtttggattttgatccctagtaa 34911828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 4778893 - 4778840
Alignment:
Q  112 aatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||  || |||||||||||||||| ||||||||||| |||| |||||    
T  4778893 aatatgctttgaattcctgcaaatatagcgattttgggttttgatccccggtaa 4778840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 4777643 - 4777699
Alignment:
Q  109 ttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||  ||| |||||||||||  | ||||| ||||||||||||||||    
T  4777643 ttaaatatgcttttagtccttgcaaatatagtaagtttggattttggtccctggtaa 4777699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 27570061 - 27570109
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccc 159  Q
    ||||||| ||||| ||| |||||||||||||| ||||||||||| ||||    
T  27570061 aaatatgattttggtccttgcaaatatagcgagtttgggttttgttccc 27570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 976785 - 976839
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  976785 aaatatgcttttgatccctgcaaatatagcgaatttaagttttagtccctggtaa 976839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 4705686 - 4705740
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  4705686 aaatatgcttttgatccctgcaaatatggcgagtttaggttttggtccctggtaa 4705740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 39820658 - 39820604
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39820658 aaatatggttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 39820604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 45267310 - 45267364
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  45267310 aaatatgtttttgatccctgcaaatatagcgagtttgagttttggtccctggtaa 45267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 47433863 - 47433809
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  47433863 aaatatggttttggtccctgcaaatatagcgaatttgagttttggtccctggtaa 47433809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 52403178 - 52403124
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  52403178 aaatatgcttttggtccctgcaaatatggcgagtttgggttttggtccctggtaa 52403124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 52708671 - 52708617
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  52708671 aaatatgcttttggtccctgcaaatatagcgagtttgggttttggtctctggtaa 52708617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 11914887 - 11914833
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||| |||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  11914887 aaatgtgcttttagtccctgcaaatatagcgaatttgggttttggtgcctggtaa 11914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 20488371 - 20488425
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||    
T  20488371 aaatatgtttttggtccctgcaaatatggtgaatttgggttttggtccctggtaa 20488425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 20585698 - 20585648
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  20585698 aaatatgtttttgatccctgcaaatatagcgagtttggattttggtccctg 20585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 45268624 - 45268570
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||    
T  45268624 aaatatgtttttaatccctgcaaatatagcaagtttgggttttggtccctggtaa 45268570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 52401022 - 52401076
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  52401022 aaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctggtaa 52401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 53121307 - 53121361
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||    
T  53121307 aaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggtaa 53121361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 54437521 - 54437467
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  54437521 aaatatgtttttggtccctgcaaatatagcgaatttgagttttggtccctagtaa 54437467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 977900 - 977846
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||| ||||||    
T  977900 aaatatgcttttggtccctgcaaatatgacgagtttgggttttggtccttggtaa 977846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 3416500 - 3416554
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||| ||||||||| | ||||| ||||||||||||||||    
T  3416500 aaatatgattttgatccctgtaaatatagcaagtttggtttttggtccctggtaa 3416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 9855183 - 9855237
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||    
T  9855183 aaatatgattttgatccctgtaaatatagcgagtttggattttggtccctagtaa 9855237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 20489412 - 20489358
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||  ||| ||||||||||||||||||||||    
T  20489412 aaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggtaa 20489358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 22508740 - 22508794
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||| |||||||||| ||||||    
T  22508740 aaatatgattttggtccctgcaaatatagcgagtttgagttttggtccttggtaa 22508794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 32637242 - 32637188
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||| |||| |||||| ||||||||||||| ||||||||    
T  32637242 aaatatgcttttggtccctgtaaatgtagcgagtttgggttttggttcctggtaa 32637188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 40477428 - 40477374
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||| ||| ||||||||||||||||| ||||    
T  40477428 aaatatgattttggtccctgcaaatataacgagtttgggttttggtccctagtaa 40477374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 42446531 - 42446577
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtc 157  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  42446531 aaatatgcttttggtccctgcaaatatggcgagtttgggttttggtc 42446577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 43641148 - 43641202
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||  |||||||||||||||||| ||||| || |||||||||||||    
T  43641148 aaatatgcttttagtccctgcaaatatagcgagtttggattatggtccctggtaa 43641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 46026081 - 46026135
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  46026081 aaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctagtaa 46026135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 46027471 - 46027417
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||||| |||||| |||||||||||||||||| ||||  ||||||||||||||||    
T  46027471 aaatatacttttggtccctgcaaatatagcgagtttgaattttggtccctggtaa 46027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 46104348 - 46104402
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||| |||||||||||    
T  46104348 aaatatgattttggtccctgcaaatatagcgagtttgagtttttgtccctggtaa 46104402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 48035786 - 48035732
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  48035786 aaatatgtttttgatccctgcaaatatgacgagtttggattttggtccctggtaa 48035732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 52707541 - 52707591
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||| ||||| ||| ||||||||||||||||||| |||||||||||||    
T  52707541 aaatatgtttttggtccttgcaaatatagcgaatttgagttttggtccctg 52707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 38505633 - 38505585
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccc 159  Q
    ||||||||||||| ||||||||||||| |||| |||| |||||||||||    
T  38505633 aaatatgcttttgctccctgcaaatatggcgagtttgagttttggtccc 38505585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 39819317 - 39819371
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||  |||||||||||||||||| ||||  ||||||||||||||||    
T  39819317 aaatatggttttagtccctgcaaatatagcgagtttgaattttggtccctggtaa 39819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 40476226 - 40476272
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtc 157  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  40476226 aaatatgtttttggtccctgcaaatatagcgagtttggattttggtc 40476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 42447841 - 42447787
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||||| ||||||||||  |  | ||||||||||||||||||||||    
T  42447841 aaatatgcttttgattcctgcaaatacggttagtttgggttttggtccctggtaa 42447787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 32635620 - 32635653
Alignment:
Q  132 aaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||| ||||||||||||||||||||||    
T  32635620 aaatatagcgagtttgggttttggtccctggtaa 32635653  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 46106797 - 46106764
Alignment:
Q  132 aaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||| ||||||||||||||||||||||    
T  46106797 aaatatagcgagtttgggttttggtccctggtaa 46106764  T

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Target: scaffold0599 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 6638 - 6584
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    |||| |||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  6638 aaatgtgcttttagtccctgcaaatatagcgaatttgggttttggtgcctggtaa 6584  T

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Target: scaffold0230 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 485 - 431
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  485 aaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 431  T

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Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 30961 - 30907
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  30961 aaatatggttttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 30907  T

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Target: scaffold0106; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 29734 - 29788
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||    
T  29734 aaatatgcttttggtccctgcaaataaaacgagtttggattttggtccctggtaa 29788  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 202584 - 202638
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||||||||||| |||||||||||||| ||| ||||| |||||||||| |||||    
T  202584 aaatatgcttttggtccctgcaaatataacgagtttggattttggtcccgggtaa 202638  T

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Target: scaffold0765 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 1859 - 1919
Alignment:
Q  105 aaggttaaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctggtaa 165  Q
    ||||| ||||||| ||||| |||||||||||||||||| |||| |||||| ||||| ||||    
T  1859 aaggtaaaatatgattttggtccctgcaaatatagcgagtttgagttttgatccctagtaa 1919  T

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Target: scaffold0095 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 42809 - 42759
Alignment:
Q  111 aaatatgcttttgatccctgcaaatatagcgaatttgggttttggtccctg 161  Q
    ||||||||||||| ||| ||||||||| |||| |||| |||||||||||||    
T  42809 aaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctg 42759  T

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