View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3540_high_10 (Length: 312)

Name: NF3540_high_10
Description: NF3540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3540_high_10
NF3540_high_10
[»] chr6 (48 HSPs)
chr6 (1-299)||(35111228-35111526)
chr6 (68-171)||(3211022-3211125)
chr6 (73-133)||(7267898-7267958)
chr6 (73-133)||(35071338-35071398)
chr6 (89-148)||(30533963-30534022)
chr6 (160-235)||(32165203-32165278)
chr6 (169-235)||(10687388-10687454)
chr6 (165-229)||(2255808-2255872)
chr6 (165-229)||(32675837-32675901)
chr6 (74-149)||(7267743-7267818)
chr6 (68-178)||(715939-716049)
chr6 (165-235)||(2027118-2027188)
chr6 (165-235)||(6752886-6752956)
chr6 (165-235)||(9202341-9202411)
chr6 (173-235)||(10755225-10755287)
chr6 (71-125)||(11795525-11795579)
chr6 (71-149)||(21891381-21891459)
chr6 (73-169)||(25430789-25430882)
chr6 (71-148)||(9894731-9894808)
chr6 (73-133)||(9201631-9201691)
chr6 (73-133)||(9202309-9202369)
chr6 (87-131)||(10687288-10687332)
chr6 (165-229)||(10874058-10874122)
chr6 (165-229)||(32615363-32615427)
chr6 (78-149)||(9201774-9201845)
chr6 (165-235)||(1189457-1189527)
chr6 (73-147)||(6632626-6632700)
chr6 (94-132)||(6758615-6758653)
chr6 (71-133)||(8014904-8014966)
chr6 (165-235)||(10184272-10184342)
chr6 (71-133)||(10687426-10687487)
chr6 (165-235)||(17300696-17300766)
chr6 (165-235)||(17915019-17915089)
chr6 (71-133)||(21025127-21025189)
chr6 (71-105)||(21025300-21025334)
chr6 (188-229)||(7267879-7267920)
chr6 (108-157)||(10755315-10755364)
chr6 (73-133)||(10873952-10874013)
chr6 (171-235)||(12816843-12816908)
chr6 (94-123)||(21610118-21610147)
chr6 (108-148)||(10054383-10054423)
chr6 (159-235)||(10401745-10401821)
chr6 (73-133)||(12816811-12816871)
chr6 (159-235)||(22708354-22708430)
chr6 (73-149)||(24625818-24625894)
chr6 (165-229)||(25430714-25430777)
chr6 (71-147)||(32615459-32615535)
chr6 (160-235)||(34223466-34223542)
[»] chr5 (96 HSPs)
chr5 (71-223)||(11163236-11163390)
chr5 (78-185)||(17128250-17128357)
chr5 (88-229)||(2670057-2670197)
chr5 (109-229)||(43268584-43268704)
chr5 (68-235)||(24030177-24030358)
chr5 (108-229)||(1943012-1943133)
chr5 (94-235)||(10537168-10537317)
chr5 (66-169)||(42851982-42852085)
chr5 (87-170)||(22201958-22202041)
chr5 (73-133)||(41125671-41125731)
chr5 (87-169)||(29922212-29922294)
chr5 (75-148)||(14243792-14243865)
chr5 (160-229)||(28357421-28357490)
chr5 (71-123)||(2577484-2577536)
chr5 (165-229)||(17657316-17657380)
chr5 (165-229)||(28625554-28625618)
chr5 (165-229)||(41059737-41059801)
chr5 (74-169)||(1473324-1473419)
chr5 (73-163)||(3520532-3520621)
chr5 (165-235)||(5559861-5559931)
chr5 (165-235)||(6144812-6144882)
chr5 (165-235)||(16722100-16722170)
chr5 (68-133)||(1576593-1576658)
chr5 (68-133)||(1608157-1608222)
chr5 (160-229)||(9477405-9477474)
chr5 (68-149)||(11991267-11991348)
chr5 (72-133)||(17868113-17868174)
chr5 (111-229)||(33803754-33803874)
chr5 (68-133)||(35536960-35537025)
chr5 (68-133)||(40697122-40697187)
chr5 (68-133)||(41059694-41059759)
chr5 (74-133)||(342258-342318)
chr5 (165-229)||(7364257-7364321)
chr5 (68-132)||(10537131-10537195)
chr5 (165-229)||(28357215-28357279)
chr5 (165-241)||(29136762-29136838)
chr5 (69-133)||(29922095-29922159)
chr5 (165-229)||(41419575-41419639)
chr5 (73-133)||(42558627-42558687)
chr5 (166-229)||(1576705-1576768)
chr5 (166-229)||(1608047-1608110)
chr5 (89-148)||(2878720-2878779)
chr5 (168-235)||(13625462-13625529)
chr5 (73-159)||(13739243-13739330)
chr5 (68-123)||(15413954-15414009)
chr5 (168-235)||(27805992-27806059)
chr5 (108-163)||(28625482-28625537)
chr5 (74-129)||(40452388-40452443)
chr5 (108-163)||(42706798-42706853)
chr5 (68-133)||(2878581-2878647)
chr5 (165-223)||(11912056-11912114)
chr5 (165-223)||(13060556-13060614)
chr5 (71-133)||(13739345-13739407)
chr5 (165-235)||(35536919-35536988)
chr5 (171-229)||(42852101-42852159)
chr5 (167-250)||(2878607-2878687)
chr5 (73-118)||(28970152-28970197)
chr5 (172-229)||(29659141-29659198)
chr5 (73-149)||(1372036-1372112)
chr5 (73-169)||(12987037-12987133)
chr5 (73-169)||(13060625-13060721)
chr5 (171-235)||(15167656-15167720)
chr5 (68-148)||(26002959-26003039)
chr5 (165-229)||(26003071-26003135)
chr5 (165-229)||(29418700-29418764)
chr5 (72-148)||(33757054-33757130)
chr5 (160-220)||(43319072-43319132)
chr5 (71-122)||(1868968-1869019)
chr5 (68-147)||(5559824-5559902)
chr5 (73-132)||(7364435-7364494)
chr5 (74-133)||(12467384-12467443)
chr5 (74-133)||(31637002-31637060)
chr5 (71-142)||(33667442-33667513)
chr5 (97-148)||(42558764-42558815)
chr5 (177-235)||(2577370-2577428)
chr5 (87-133)||(3977589-3977635)
chr5 (165-235)||(5203376-5203446)
chr5 (95-133)||(11706977-11707015)
chr5 (111-169)||(12467269-12467327)
chr5 (62-132)||(14243942-14244012)
chr5 (165-235)||(20458500-20458570)
chr5 (71-133)||(28625596-28625657)
chr5 (71-133)||(41125790-41125852)
chr5 (87-133)||(42852137-42852183)
chr5 (71-123)||(1576756-1576809)
chr5 (71-123)||(1608006-1608059)
chr5 (165-214)||(1868920-1868969)
chr5 (111-229)||(33732375-33732495)
chr5 (71-132)||(39154669-39154730)
chr5 (108-157)||(41059824-41059873)
chr5 (73-133)||(6125402-6125462)
chr5 (89-133)||(6144854-6144898)
chr5 (165-221)||(7565220-7565276)
chr5 (78-130)||(11706826-11706878)
chr5 (89-133)||(29657981-29658025)
chr5 (111-163)||(41534628-41534680)
[»] chr7 (49 HSPs)
chr7 (73-210)||(40629399-40629535)
chr7 (165-234)||(46744027-46744096)
chr7 (60-148)||(34922885-34922973)
chr7 (73-148)||(38372525-38372600)
chr7 (73-149)||(18837189-18837265)
chr7 (71-235)||(29390493-29390671)
chr7 (72-163)||(30181516-30181607)
chr7 (71-196)||(24371403-24371527)
chr7 (68-133)||(33204950-33205015)
chr7 (160-229)||(47654362-47654431)
chr7 (74-133)||(37779337-37779395)
chr7 (94-149)||(44613516-44613571)
chr7 (165-223)||(14691253-14691311)
chr7 (165-235)||(29378719-29378789)
chr7 (165-229)||(22032836-22032900)
chr7 (165-235)||(991573-991643)
chr7 (165-235)||(7774689-7774759)
chr7 (165-235)||(23137105-23137175)
chr7 (71-133)||(29378761-29378823)
chr7 (73-123)||(35331109-35331159)
chr7 (72-133)||(34923049-34923110)
chr7 (68-149)||(35809052-35809133)
chr7 (168-229)||(37465834-37465895)
chr7 (172-229)||(43818826-43818883)
chr7 (73-133)||(29390461-29390521)
chr7 (159-235)||(44799470-44799546)
chr7 (89-148)||(12473189-12473248)
chr7 (165-223)||(18765065-18765124)
chr7 (160-235)||(22575655-22575730)
chr7 (89-148)||(23119964-23120023)
chr7 (73-132)||(26331778-26331837)
chr7 (68-147)||(28004546-28004625)
chr7 (165-228)||(35246743-35246806)
chr7 (165-235)||(1312187-1312257)
chr7 (165-235)||(16932872-16932942)
chr7 (165-235)||(16938255-16938325)
chr7 (165-235)||(16958889-16958959)
chr7 (73-151)||(22032729-22032807)
chr7 (71-133)||(25908410-25908472)
chr7 (165-235)||(28004657-28004727)
chr7 (165-223)||(33288029-33288087)
chr7 (173-223)||(38372640-38372690)
chr7 (71-133)||(38372674-38372736)
chr7 (160-225)||(14675912-14675977)
chr7 (73-122)||(40629343-40629392)
chr7 (165-238)||(41677449-41677522)
chr7 (108-149)||(47511045-47511086)
chr7 (163-220)||(48021605-48021662)
chr7 (73-133)||(33287985-33288045)
[»] chr4 (87 HSPs)
chr4 (73-235)||(23297405-23297579)
chr4 (94-235)||(11298581-11298726)
chr4 (115-235)||(48686958-48687078)
chr4 (73-149)||(29877606-29877682)
chr4 (68-148)||(38345865-38345945)
chr4 (74-169)||(35124355-35124450)
chr4 (165-235)||(11256603-11256673)
chr4 (165-235)||(22273854-22273924)
chr4 (75-148)||(8130457-8130530)
chr4 (73-149)||(42611910-42611987)
chr4 (70-133)||(48667786-48667849)
chr4 (71-133)||(34633364-34633426)
chr4 (165-235)||(38345764-38345834)
chr4 (71-149)||(43699526-43699604)
chr4 (68-169)||(3564182-3564283)
chr4 (68-133)||(48591329-48591394)
chr4 (73-149)||(12495689-12495764)
chr4 (73-132)||(36741021-36741080)
chr4 (165-235)||(29877713-29877783)
chr4 (165-235)||(34526279-34526349)
chr4 (71-133)||(42153070-42153132)
chr4 (165-235)||(48591366-48591436)
chr4 (160-229)||(4603280-4603349)
chr4 (71-148)||(42617273-42617350)
chr4 (71-147)||(948037-948113)
chr4 (74-134)||(22273761-22273821)
chr4 (71-123)||(40699321-40699373)
chr4 (168-235)||(488326-488393)
chr4 (74-133)||(1374422-1374481)
chr4 (168-235)||(19414192-19414259)
chr4 (160-235)||(36740973-36741048)
chr4 (165-235)||(15179891-15179961)
chr4 (165-223)||(17222903-17222961)
chr4 (165-235)||(23284733-23284803)
chr4 (165-235)||(28074438-28074508)
chr4 (165-235)||(36254978-36255048)
chr4 (165-235)||(41228977-41229047)
chr4 (68-133)||(488289-488354)
chr4 (72-133)||(3564322-3564383)
chr4 (61-142)||(10794959-10795040)
chr4 (61-142)||(10796341-10796422)
chr4 (68-133)||(12495549-12495614)
chr4 (108-169)||(23335644-23335705)
chr4 (165-221)||(2330429-2330485)
chr4 (173-229)||(14987548-14987604)
chr4 (73-133)||(17222945-17223005)
chr4 (87-147)||(18424322-18424382)
chr4 (109-169)||(28074368-28074428)
chr4 (81-133)||(35405799-35405851)
chr4 (159-235)||(42617172-42617248)
chr4 (165-229)||(47202899-47202963)
chr4 (68-123)||(2702784-2702839)
chr4 (108-163)||(7148774-7148829)
chr4 (160-211)||(15184615-15184666)
chr4 (74-133)||(28074480-28074539)
chr4 (165-228)||(39931493-39931556)
chr4 (168-235)||(42153104-42153171)
chr4 (159-229)||(52700491-52700562)
chr4 (71-105)||(825812-825846)
chr4 (169-235)||(897048-897114)
chr4 (177-235)||(3966815-3966873)
chr4 (165-223)||(18424232-18424290)
chr4 (87-133)||(23297551-23297597)
chr4 (71-133)||(30956800-30956862)
chr4 (71-133)||(38345731-38345792)
chr4 (159-229)||(46175927-46175997)
chr4 (72-133)||(7148888-7148948)
chr4 (176-229)||(9201735-9201788)
chr4 (160-229)||(9319117-9319186)
chr4 (168-229)||(31022477-31022538)
chr4 (166-235)||(32628853-32628922)
chr4 (73-133)||(42611778-42611839)
chr4 (74-147)||(46176023-46176096)
chr4 (111-148)||(55638125-55638162)
chr4 (171-235)||(7148852-7148916)
chr4 (89-133)||(7206645-7206689)
chr4 (171-235)||(9153524-9153588)
chr4 (89-133)||(18630821-18630865)
chr4 (74-142)||(19414097-19414165)
chr4 (96-148)||(27368196-27368248)
chr4 (72-112)||(32628747-32628787)
chr4 (171-223)||(34633470-34633522)
chr4 (74-122)||(35405653-35405701)
chr4 (68-133)||(36255102-36255163)
chr4 (165-229)||(40699434-40699498)
chr4 (73-133)||(41071466-41071526)
chr4 (191-235)||(43415230-43415274)
[»] chr1 (77 HSPs)
chr1 (71-229)||(4068080-4068253)
chr1 (71-132)||(391133-391194)
chr1 (112-235)||(8410155-8410277)
chr1 (160-235)||(32497214-32497289)
chr1 (165-235)||(6337698-6337768)
chr1 (165-235)||(15515289-15515359)
chr1 (161-235)||(15791453-15791527)
chr1 (165-235)||(37712141-37712211)
chr1 (73-133)||(47413488-47413548)
chr1 (73-133)||(48819415-48819475)
chr1 (165-235)||(13039021-13039091)
chr1 (165-235)||(17628367-17628437)
chr1 (71-169)||(18327489-18327587)
chr1 (72-170)||(35897645-35897743)
chr1 (165-235)||(48819373-48819443)
chr1 (167-223)||(391251-391308)
chr1 (159-236)||(41576336-41576413)
chr1 (108-221)||(51409678-51409791)
chr1 (159-223)||(31249750-31249814)
chr1 (165-229)||(37329360-37329424)
chr1 (71-123)||(42367076-42367128)
chr1 (165-229)||(46689498-46689562)
chr1 (89-148)||(20169247-20169306)
chr1 (94-133)||(22593338-22593377)
chr1 (73-132)||(26946014-26946073)
chr1 (74-169)||(37148116-37148211)
chr1 (74-169)||(37156941-37157036)
chr1 (74-133)||(41196621-41196680)
chr1 (159-229)||(5243352-5243422)
chr1 (165-235)||(8061951-8062021)
chr1 (165-223)||(12256680-12256738)
chr1 (165-235)||(17814264-17814334)
chr1 (165-235)||(26435117-26435187)
chr1 (74-132)||(26946165-26946223)
chr1 (74-169)||(28689970-28690067)
chr1 (71-133)||(28690120-28690182)
chr1 (171-229)||(35275846-35275904)
chr1 (75-133)||(35590099-35590157)
chr1 (108-169)||(1005342-1005403)
chr1 (72-133)||(1565284-1565344)
chr1 (165-222)||(3069809-3069866)
chr1 (168-229)||(22593355-22593416)
chr1 (170-235)||(35897561-35897626)
chr1 (165-229)||(3116010-3116074)
chr1 (69-133)||(16225472-16225536)
chr1 (165-229)||(16888914-16888978)
chr1 (159-235)||(42591450-42591526)
chr1 (74-133)||(10365286-10365345)
chr1 (89-148)||(10850115-10850174)
chr1 (94-133)||(46689609-46689648)
chr1 (71-133)||(4068231-4068293)
chr1 (165-235)||(5347228-5347298)
chr1 (94-132)||(9572845-9572883)
chr1 (165-235)||(22103183-22103253)
chr1 (165-235)||(26988222-26988292)
chr1 (165-235)||(28690078-28690148)
chr1 (71-133)||(28870319-28870381)
chr1 (74-148)||(32497315-32497389)
chr1 (71-133)||(37329320-37329382)
chr1 (73-163)||(37712035-37712124)
chr1 (165-235)||(41196652-41196722)
chr1 (165-219)||(45267540-45267594)
chr1 (104-169)||(1565405-1565470)
chr1 (165-222)||(18317075-18317132)
chr1 (74-123)||(26435086-26435135)
chr1 (65-134)||(35590246-35590315)
chr1 (165-238)||(36422920-36422993)
chr1 (68-133)||(42591344-42591409)
chr1 (69-133)||(46473057-46473121)
chr1 (165-229)||(272613-272677)
chr1 (74-130)||(1321510-1321566)
chr1 (165-229)||(15631978-15632042)
chr1 (165-229)||(16708873-16708937)
chr1 (97-133)||(20169380-20169416)
chr1 (87-123)||(26435243-26435279)
chr1 (73-133)||(26988264-26988324)
chr1 (73-133)||(37712183-37712243)
[»] chr2 (64 HSPs)
chr2 (74-201)||(37419955-37420081)
chr2 (71-235)||(38215988-38216163)
chr2 (71-133)||(887528-887590)
chr2 (79-169)||(4090462-4090552)
chr2 (73-149)||(27703501-27703574)
chr2 (94-148)||(34913434-34913488)
chr2 (80-169)||(4026900-4026988)
chr2 (69-133)||(8832573-8832637)
chr2 (68-123)||(2790140-2790195)
chr2 (94-229)||(8441461-8441596)
chr2 (168-235)||(8832534-8832601)
chr2 (160-223)||(38471745-38471808)
chr2 (73-235)||(2757028-2757188)
chr2 (165-235)||(4026999-4027069)
chr2 (71-149)||(12442903-12442980)
chr2 (89-130)||(23956314-23956355)
chr2 (165-229)||(446501-446565)
chr2 (165-229)||(887486-887550)
chr2 (73-133)||(5903654-5903714)
chr2 (73-133)||(5903731-5903791)
chr2 (167-235)||(7480841-7480909)
chr2 (73-169)||(11776951-11777047)
chr2 (73-149)||(12683649-12683725)
chr2 (165-229)||(21788531-21788595)
chr2 (101-169)||(25836735-25836803)
chr2 (167-235)||(30382211-30382279)
chr2 (89-169)||(33321335-33321415)
chr2 (73-169)||(33321426-33321522)
chr2 (73-133)||(36501425-36501485)
chr2 (73-133)||(38471850-38471910)
chr2 (68-130)||(4533441-4533503)
chr2 (73-115)||(13097883-13097925)
chr2 (165-223)||(29774819-29774877)
chr2 (165-235)||(33321254-33321324)
chr2 (89-143)||(37409626-37409680)
chr2 (69-169)||(11072909-11073009)
chr2 (74-123)||(33321223-33321272)
chr2 (68-133)||(38216135-38216200)
chr2 (71-148)||(40301317-40301394)
chr2 (81-129)||(4027045-4027093)
chr2 (79-163)||(13056356-13056440)
chr2 (97-149)||(21788448-21788500)
chr2 (165-229)||(42064925-42064989)
chr2 (170-222)||(44475474-44475526)
chr2 (160-235)||(32521988-32522063)
chr2 (71-149)||(755785-755862)
chr2 (165-235)||(4004893-4004963)
chr2 (167-229)||(4090565-4090627)
chr2 (87-169)||(5903514-5903596)
chr2 (165-223)||(10574115-10574173)
chr2 (165-223)||(13056281-13056339)
chr2 (167-229)||(15155889-15155951)
chr2 (165-235)||(22898299-22898369)
chr2 (71-133)||(29774710-29774772)
chr2 (165-235)||(42839263-42839333)
chr2 (68-133)||(446414-446479)
chr2 (168-229)||(23956212-23956273)
chr2 (96-149)||(27243580-27243633)
chr2 (74-223)||(35515449-35515598)
chr2 (73-133)||(755621-755681)
chr2 (97-133)||(1768761-1768797)
chr2 (165-229)||(2401570-2401634)
chr2 (97-133)||(27709727-27709763)
chr2 (177-229)||(27880945-27880997)
[»] chr8 (58 HSPs)
chr8 (68-148)||(13131392-13131472)
chr8 (165-235)||(25333643-25333713)
chr8 (165-235)||(34286506-34286576)
chr8 (74-133)||(32131408-32131467)
chr8 (165-235)||(9131070-9131140)
chr8 (165-235)||(16972298-16972368)
chr8 (165-235)||(35055496-35055565)
chr8 (165-229)||(9130965-9131029)
chr8 (165-235)||(12607153-12607223)
chr8 (71-133)||(13131559-13131621)
chr8 (165-235)||(19925631-19925701)
chr8 (71-133)||(28879171-28879233)
chr8 (71-133)||(32212923-32212985)
chr8 (165-235)||(32975761-32975831)
chr8 (161-235)||(42102176-42102250)
chr8 (165-235)||(42363259-42363329)
chr8 (165-229)||(11988270-11988334)
chr8 (165-229)||(24866899-24866963)
chr8 (159-235)||(38338793-38338869)
chr8 (68-123)||(2019718-2019773)
chr8 (89-148)||(19327850-19327909)
chr8 (69-128)||(30973952-30974011)
chr8 (160-235)||(37410855-37410930)
chr8 (165-235)||(25465789-25465859)
chr8 (165-235)||(32131514-32131584)
chr8 (73-130)||(10213814-10213871)
chr8 (95-148)||(19925546-19925599)
chr8 (108-169)||(28879060-28879121)
chr8 (108-169)||(32213045-32213106)
chr8 (108-169)||(35453412-35453473)
chr8 (71-148)||(38338894-38338971)
chr8 (167-227)||(8752882-8752942)
chr8 (73-169)||(14942391-14942487)
chr8 (89-133)||(16706026-16706070)
chr8 (165-229)||(24350467-24350531)
chr8 (68-148)||(42363360-42363440)
chr8 (102-169)||(14709559-14709626)
chr8 (89-148)||(16706144-16706203)
chr8 (165-235)||(25671832-25671900)
chr8 (71-121)||(10298835-10298885)
chr8 (74-148)||(16972401-16972475)
chr8 (70-128)||(19925452-19925510)
chr8 (71-133)||(25671799-25671860)
chr8 (71-133)||(32975803-32975865)
chr8 (88-133)||(24087121-24087166)
chr8 (103-148)||(29243107-29243152)
chr8 (172-229)||(31079114-31079171)
chr8 (108-169)||(32975689-32975750)
chr8 (72-133)||(34286473-34286534)
chr8 (74-123)||(36907717-36907766)
chr8 (71-148)||(42102072-42102149)
chr8 (170-235)||(42667076-42667141)
chr8 (89-133)||(12607195-12607239)
chr8 (111-171)||(13265489-13265549)
chr8 (73-133)||(16972266-16972326)
chr8 (73-133)||(25465758-25465817)
chr8 (89-133)||(32924271-32924315)
chr8 (73-149)||(35285895-35285971)
[»] chr3 (62 HSPs)
chr3 (160-235)||(17752073-17752148)
chr3 (160-235)||(19053393-19053468)
chr3 (165-235)||(40240519-40240589)
chr3 (89-229)||(25341265-25341408)
chr3 (167-223)||(34707667-34707723)
chr3 (68-143)||(23555446-23555521)
chr3 (74-169)||(53218063-53218158)
chr3 (165-235)||(45331237-45331307)
chr3 (72-149)||(10272088-10272165)
chr3 (68-169)||(40581100-40581201)
chr3 (68-128)||(4974273-4974333)
chr3 (160-250)||(29830568-29830656)
chr3 (73-169)||(22809216-22809313)
chr3 (165-226)||(37778207-37778268)
chr3 (165-229)||(10449051-10449115)
chr3 (73-149)||(29270328-29270404)
chr3 (73-149)||(34707756-34707832)
chr3 (165-229)||(40581024-40581088)
chr3 (72-147)||(2086736-2086811)
chr3 (160-235)||(3645371-3645446)
chr3 (160-235)||(20894571-20894646)
chr3 (160-235)||(29614262-29614337)
chr3 (71-133)||(584985-585047)
chr3 (165-211)||(28741180-28741226)
chr3 (73-131)||(50022017-50022075)
chr3 (168-229)||(1516046-1516107)
chr3 (79-132)||(20685744-20685797)
chr3 (162-211)||(21720978-21721027)
chr3 (168-229)||(42956127-42956188)
chr3 (166-223)||(52895359-52895416)
chr3 (166-219)||(53217998-53218051)
chr3 (74-123)||(53261816-53261865)
chr3 (73-149)||(10448741-10448817)
chr3 (73-169)||(21296733-21296829)
chr3 (167-235)||(24841328-24841396)
chr3 (89-133)||(33946601-33946645)
chr3 (73-133)||(46573364-46573424)
chr3 (73-168)||(3845822-3845917)
chr3 (68-147)||(20894465-20894544)
chr3 (165-223)||(48597820-48597879)
chr3 (159-194)||(52421124-52421159)
chr3 (165-223)||(22809147-22809205)
chr3 (177-235)||(31787608-31787666)
chr3 (169-235)||(33946492-33946558)
chr3 (165-227)||(35583670-35583732)
chr3 (159-229)||(37243534-37243604)
chr3 (71-133)||(40240486-40240547)
chr3 (165-223)||(43079888-43079946)
chr3 (72-149)||(5129920-5129997)
chr3 (108-149)||(40240620-40240661)
chr3 (71-136)||(43079842-43079907)
chr3 (108-169)||(43079957-43080018)
chr3 (108-169)||(52421164-52421225)
chr3 (168-229)||(53787700-53787761)
chr3 (165-229)||(20174888-20174952)
chr3 (61-105)||(29270480-29270524)
chr3 (73-133)||(30321640-30321700)
chr3 (68-128)||(30383730-30383790)
chr3 (165-229)||(36182578-36182642)
chr3 (72-148)||(36266210-36266286)
chr3 (165-229)||(38524162-38524226)
chr3 (165-229)||(47403710-47403774)
[»] scaffold0157 (2 HSPs)
scaffold0157 (73-149)||(24713-24788)
scaffold0157 (68-133)||(24863-24928)
[»] scaffold0100 (1 HSPs)
scaffold0100 (165-235)||(38395-38465)
[»] scaffold0015 (1 HSPs)
scaffold0015 (70-133)||(48535-48598)
[»] scaffold0048 (2 HSPs)
scaffold0048 (70-148)||(59232-59310)
scaffold0048 (67-123)||(58772-58828)
[»] scaffold0004 (1 HSPs)
scaffold0004 (165-235)||(242582-242652)
[»] scaffold0024 (2 HSPs)
scaffold0024 (72-132)||(97115-97175)
scaffold0024 (77-149)||(97249-97321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (68-148)||(178462-178542)
[»] scaffold0332 (1 HSPs)
scaffold0332 (171-229)||(14694-14752)
[»] scaffold0191 (1 HSPs)
scaffold0191 (68-132)||(31245-31311)
[»] scaffold1367 (1 HSPs)
scaffold1367 (89-133)||(1174-1218)
[»] scaffold0057 (1 HSPs)
scaffold0057 (89-149)||(43859-43919)
[»] scaffold0022 (1 HSPs)
scaffold0022 (108-164)||(89281-89337)
[»] scaffold0006 (1 HSPs)
scaffold0006 (167-235)||(40616-40684)


Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 35111526 - 35111228
Alignment:
Q  1 attaagaatttctgcagtcctgtagcagacgacacaggttcatgataattatcaatttgatatatatggtccgtttggattggctaatttttaagcttat 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35111526 attaagaatttctgcagtcctgcagcagacgacacaggttcatgataattatcaatttgatatatatggtccgtttggattggctaatttttaagcttat 35111427  T
Q  101 gcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35111426 gcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaa 35111327  T
Q  201 ttaagataaaagtttatttatttacataatctattcttttttcataagctnnnnnnntaagtgaatccaaaggaacccataatgatgaaatattgagaa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  35111326 ttaagataaaagtttatttatttacataatctattcttttttcataagctaaaaaaataagtgaatccaaaggaacccataatgatgaaatattgagaa 35111228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 3211125 - 3211022
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatg 167  Q
    |||| |||||||| |||| |||||| ||||| |||||||||||||||||||||||| ||||||||| ||| || | |||||| | ||||  ||||| |||    
T  3211125 ggtctgtttggatcggcttattttttagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatg 3211026  T
Q  168 aaga 171  Q
    ||||    
T  3211025 aaga 3211022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 7267958 - 7267898
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| ||||||||||||||| | |||| |||||||||||||| |||||||||    
T  7267958 gtttggattggcttatttttaagcttatgaataacaacttatgcaaataaataagctttta 7267898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 35071338 - 35071398
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  35071338 gtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagctttta 35071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 30533963 - 30534022
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  30533963 ttttgagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattattcataag 30534022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 32165278 - 32165203
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| |||||||||||||||||||||| |||| ||||  |||||| ||||||  |||||||||||||||| |||||    
T  32165278 agtttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacataagctatt 32165203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 10687388 - 10687454
Alignment:
Q  169 agatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||||||||| ||| | | ||||||| |||||||||| ||||| |||||    
T  10687388 agatacaattttcgttagcgagaacttatgaactgacataaaagcttatttatttgcataaactatt 10687454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 2255808 - 2255872
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| | ||| |||||| || ||||||| ||||||| ||||||||||||||||    
T  2255808 atgaagatacaatttttggtagtgagaacatatgaattaacataaaagcttatttatttacataa 2255872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 32675901 - 32675837
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||| |||| ||||||||| ||||||| ||||||  |||||||||| |||||    
T  32675901 atgaagatacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataa 32675837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 7267743 - 7267818
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||||  ||||| |||||| | ||||| ||||||||||| ||| ||||||||| ||| |||||||||||    
T  7267743 tttggattggcttgttttttagcttaagtaaaacggcttatgcaaacaaataagcttttatgtattattcataagc 7267818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 178
Target Start/End: Complemental strand, 716049 - 715939
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatg 167  Q
    ||||||||||||||| || ||||| ||||||||||||| || |||||| ||||||| ||| || || ||| |||| |||| | | | ||| | ||| |||    
T  716049 ggtccgtttggattgacttattttaaagcttatgcaaatcaacttatgtaaataaataagtttctatgtattatttataaacttgtaaaggtggtttatg 715950  T
Q  168 aagatacaatt 178  Q
    |||||||||||    
T  715949 aagatacaatt 715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 2027188 - 2027118
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||| ||| |||||  |||||||| ||||||| |||||||||||| ||||| ||||| |||||    
T  2027188 atgaagatacaacttttgttagtaagaacttatgaattaacataaaagtttatctatttgcataagctatt 2027118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 6752886 - 6752956
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||| |||| ||| | ||| ||||||| ||||||| |||||||||| ||||| |||||    
T  6752886 atgaagatacaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagctatt 6752956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 9202411 - 9202341
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||  |||| || |||||| ||||||| ||||||| ||||||||| |||||| |||||    
T  9202411 atgaagatacaatttttattagtgataacttatgaattaacataaaagcttatttattaacataagctatt 9202341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 10755287 - 10755225
Alignment:
Q  173 acaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||  |||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  10755287 acaattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatt 10755225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 11795525 - 11795579
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaaca 125  Q
    |||||||||||| || |||| | |||||||||||||||| |||||||||||||||    
T  11795525 ccgtttggattgacttatttctgagcttatgcaaaacagattatgcaaataaaca 11795579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 21891459 - 21891381
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||||  |||||||| |||||||||| || |||||||||||||||| ||| ||| |  || |||||||||||    
T  21891459 ccgtttggattgattaatttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagc 21891381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 25430882 - 25430789
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||| || |||||| |||||||| |||||||||||| |||||||| |||| |||| |   ||||||||||| | ||||| ||||| |||||    
T  25430882 gtttggattgacttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatg---tattcataagcttgtcaaggtagtttatgaa 25430789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 9894731 - 9894808
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||| ||| |||||  ||||||| |||||||||||| ||||||||| || |||||| ||| |||| |||||    
T  9894731 ccgtttggattagcttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataag 9894808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 9201631 - 9201691
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||| ||||||| |||||| |||||||| ||||  ||||||||||||||| |||||||||    
T  9201631 gtttgaattggcttattttttagcttatggaaaatcgcttatgcaaataaataagctttta 9201691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 9202309 - 9202369
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||||||| |||| ||||||||  |||||| |||||||||    
T  9202309 gtttggattggcttattttttagcttatgaaaaatagcttatgttaataaataagctttta 9202369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 10687288 - 10687332
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagcttt 131  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||    
T  10687288 atttttgagcttattcaaaacagcttatgcaaataaataagcttt 10687332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 10874058 - 10874122
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| ||| | || |||||| ||||||| ||||||| |||||||||| |||||    
T  10874058 atgaagatacaattttagttggtgaaaacttatgaattaacataaaagcttatttatttgcataa 10874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 32615427 - 32615363
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||| | ||  |||||| ||||||| ||| ||||||||||||    
T  32615427 atgaagatacaattttcgttagtgagagcatataaattaaaataaaagcttacttatttacataa 32615363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 9201845 - 9201774
Alignment:
Q  78 gattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||| | |||| |||||| |||||||||||||||||||| || |||||||   ||| |||||||||||    
T  9201845 gattggcttaattttgagcttacgcaaaacagcttatgcaaatgaataagctttgctgtattattcataagc 9201774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 1189457 - 1189527
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| |||||||||| ||||  |||  |||||| || |||| |||||||||||||||| |||||    
T  1189457 atgaagatacacttttcgttagtgagagtttataaattaaaattaaagcttatttatttacataagctatt 1189527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 6632626 - 6632700
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    ||||||||| ||| |||||  ||||||| ||||||| |||||||||||||| | ||||||| ||| |||| ||||    
T  6632626 gtttggattagcttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataa 6632700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 6758615 - 6758653
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  6758615 agcttatgcaaaacaacttatgcaaataaataagctttt 6758653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 8014966 - 8014904
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||| ||| || |||||||||||| |||| ||| ||||||||| || |||||||||    
T  8014966 ccgtttggatttgcttatatttaagcttatgaaaaatagcatatgcaaattaataagctttta 8014904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 10184342 - 10184272
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||| ||||||||||||||  ||| ||||  |||||| ||||||| ||||||||||| |||| |||||    
T  10184342 atgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatt 10184272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 10687487 - 10687426
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| |||||||| |||||| |||||||| |||| || ||||||||||||| |||||||||    
T  10687487 ccgtttagattggcttattttttagcttatg-aaaatagtttatgcaaataaataagctttta 10687426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 17300766 - 17300696
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||| ||||||||| || ||||||  |||||| ||||||  |||||||||||||||| |||||    
T  17300766 atgaatatacaactttcgttagtgacaacttataaattaaaataaaaagttatttatttacataaactatt 17300696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 17915019 - 17915089
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||||||||  ||||||||   ||||| ||||||| ||||||||||| |||| |||||    
T  17915019 atgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttatataaactatt 17915089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 21025127 - 21025189
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||  | |||||| |||||||  |||| |||||||||||||||| |||||||||    
T  21025127 ccgtttggattgatttattttttagcttatcaaaaatagcttatgcaaataaataagctttta 21025189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 21025334 - 21025300
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaa 105  Q
    |||||||||||||||||||||| ||||||||||||    
T  21025334 ccgtttggattggctaattttttagcttatgcaaa 21025300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 7267879 - 7267920
Alignment:
Q  188 gagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||| ||||||| |||||||||| |||||    
T  7267879 gagaacttacgaattaacataaaagcttatttatttgcataa 7267920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 10755364 - 10755315
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaag 157  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| | |||||    
T  10755364 agcttatgcaaataaataagcttttacgtattattcataagcttgtcaag 10755315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 10873952 - 10874013
Alignment:
Q  73 gtttggattggc-taatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| || ||||| || |||||||||| |||||||||| ||||| |||||||||    
T  10873952 gtttggattggcttattttttgagattatgcaaaatagcttatgcatataaataagctttta 10874013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 12816908 - 12816843
Alignment:
Q  171 atacaattttcgttagcgagaactt-acgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||| |||||||| | ||||||| ||||||| |||||||||| ||||| |||||    
T  12816908 ataccattttcgttagtgagaacttaatgaattaacataaaagcttatttatttgcataaactatt 12816843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 21610147 - 21610118
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaa 123  Q
    ||||||||||||||||||||||||||||||    
T  21610147 agcttatgcaaaacagcttatgcaaataaa 21610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 10054383 - 10054423
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  10054383 agcttatgcaaataaataagcttttatgtattattcataag 10054423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 10401821 - 10401745
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| || |||||||||||||||||||  ||| ||||  |||||| ||||||  ||||||| ||| ||||||||||    
T  10401821 tagtttatcaagatacaattttcgttagtaagagcttataaattaaaataaaaacttatttagttatataatctatt 10401745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 12816811 - 12816871
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||  || |||||| |||||||| |||| || ||||||||||||| |||||||||    
T  12816811 gtttggattaacttatttttgagcttatgaaaaatagtttatgcaaataaataagctttta 12816871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 22708354 - 22708430
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||||||||||||||| | ||  |||  |||||| ||||||  |||||||||| ||||| |||||    
T  22708354 tagtttatgaagatacaattttcgttagtgggagtttataaattaaaataaaaacttatttatttgcataagctatt 22708430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 24625818 - 24625894
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||| || |||||| || ||| |||| ||| | |||||||||||| | ||||||| ||| |||||||||||    
T  24625818 gtttggattgtcttatttttgaggttaggcaagacaacatatgcaaataaatacgcttttatgtattattcataagc 24625894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 25430777 - 25430714
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| || || ||||| ||| |||||||| ||||||||||||| ||| |||||    
T  25430777 atgaagatacaatttt-gtcagtgagaaattatgaattaaggtaaaagtttatttctttgcataa 25430714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 32615535 - 32615459
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    |||||||||||  || |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| ||||    
T  32615535 ccgtttggattaacttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 32615459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 34223542 - 34223466
Alignment:
Q  160 agttaatgaagatacaattttc-gttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||  ||||| |||| ||||  |||||| ||||||  |||||||||||||||| |||||    
T  34223542 agtttatgaagatacaattttttgttagtgagagcttataaattaaaataaaaacttatttatttacataagctatt 34223466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 96)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 11163390 - 11163236
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatg--a 168  Q
    |||||||||||| || |||||| |||||||||||||||||||||| |||| || ||| ||||| |||  |||||||||| | || || ||||| |||  |    
T  11163390 ccgtttggattgacttattttttagcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagtttatgaaa 11163291  T
Q  169 agatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||||||||| | ||||||| ||||||| ||||||| ||||||||||    
T  11163290 agatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttattt 11163236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 17128250 - 17128357
Alignment:
Q  78 gattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaat 177  Q
    ||||| || |||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| | ||||||  ||||| ||||| |||||||    
T  17128250 gattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaat 17128349  T
Q  178 tttcgtta 185  Q
    ||||||||    
T  17128350 tttcgtta 17128357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 2670057 - 2670197
Alignment:
Q  88 tttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagc 187  Q
    ||||| |||||||| ||||||| |||||||||||||||| |||||| ||| ||||||||||  | ||||| ||||| ||||| ||| ||||||||||||     
T  2670057 tttttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaatataattttcgttagt 2670156  T
Q  188 gagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| ||| ||| ||| |||||| ||||||||||| |||||    
T  2670157 gagaatttatgaa-taacataaaaatttatttatttgcataa 2670197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 43268704 - 43268584
Alignment:
Q  109 gcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagata 208  Q
    ||||||||||||||| ||||||||| ||| |||| ||||||   ||||| ||||| |||||||||||||||| ||||| |||||||||  |||||| |||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaagatacaatttttgttagtgagaacttataaattaacata 43268605  T
Q  209 aaagtttatttatttacataa 229  Q
    |||| |||||||||| |||||    
T  43268604 aaagcttatttattttcataa 43268584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 235
Target Start/End: Original strand, 24030177 - 24030358
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatg 167  Q
    |||| ||||||| || || |||||||||||||| ||||||||||||| |||||||| ||||||||| ||| ||||||||||| | ||||  ||||| |||    
T  24030177 ggtctgtttggaatgacttatttttaagcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatg 24030276  T
Q  168 aa--------------gatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||              ||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  24030277 aaaaaacacttgcgaggatacaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctatt 24030358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 1943012 - 1943133
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagat 207  Q
    ||||||||||| |||| ||| ||||| ||| ||| ||||||| | ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||  ||    
T  1943012 agcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaagatacaattttcattagtgagaacttatgaattagcat 1943111  T
Q  208 aaaagtttatttatttacataa 229  Q
    ||||| |||||||||| |||||    
T  1943112 aaaagcttatttatttgcataa 1943133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 10537317 - 10537168
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa-------gatacaattttcgttag 186  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||| |||| |||||| | ||||| ||||| |||||       |||||||||||||||||    
T  10537317 agcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaacaggatacaattttcgttag 10537218  T
Q  187 cgagaacttacgaattaagat-aaaagtttatttatttacataatctatt 235  Q
     ||||||||| ||||||| || ||||| |||| ||||| ||||| |||||    
T  10537217 tgagaacttatgaattaacataaaaagcttatatatttgcataagctatt 10537168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 42851982 - 42852085
Alignment:
Q  66 atggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaa 165  Q
    |||| ||||| ||||||||| ||||||  |||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |    
T  42851982 atggcccgttcggattggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagttta 42852081  T
Q  166 tgaa 169  Q
    ||||    
T  42852082 tgaa 42852085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 22202041 - 22201958
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaag 170  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| | ||||| ||||| ||||||    
T  22202041 atttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaag 22201958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 41125671 - 41125731
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||||||||| |||||||    
T  41125671 gtttggattggcttatttttgagcttatgcaaaacaacttatgcaaataaacaggctttta 41125731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 29922294 - 29922212
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||| ||| ||||||||||| | ||||| ||||| |||||    
T  29922294 atttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaa 29922212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 14243792 - 14243865
Alignment:
Q  75 ttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||| || |||||| || ||||||||||||||||||| ||||||| |||||| || ||||||||||||||    
T  14243792 ttggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagcttctatgtaatattcataag 14243865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 28357421 - 28357490
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||| |||||| | ||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||    
T  28357421 agtttatgaaggtccaattttcgttagtgagaacttacgaattaagataaaaacttatttatttgcataa 28357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 2577536 - 2577484
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  2577536 ccgtttggattggcttattttttagcttatccaaaacagcttatgcaaataaa 2577484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 17657316 - 17657380
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||| ||||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||    
T  17657316 atgaagatacgattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcataa 17657380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 28625554 - 28625618
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||||| || ||||||| ||||||| |||||||||| |||||    
T  28625554 atgaagatacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataa 28625618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 41059801 - 41059737
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||| ||||||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||    
T  41059801 atgaagattcaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataa 41059737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 1473324 - 1473419
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||| |||  ||||| ||||||| || |||| |||||||||||||| ||||||||| ||| ||||||||||| | |||||||| || |||||    
T  1473324 tttggatttgcttctttttgagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaa 1473419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 3520621 - 3520532
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    |||||||||| || |||||| |||||||||||||||| ||||| ||||||| || ||||| |||| ||||||||||| | ||||| |||||    
T  3520621 gtttggattgacttattttttagcttatgcaaaacagtttatgtaaataaataacctttt-agtattattcataagcttgtcaaggtagtt 3520532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 5559931 - 5559861
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| ||||| ||| ||||| | ||||||| |||||||||| ||||| |||||    
T  5559931 atgaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagctatt 5559861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 6144812 - 6144882
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||| ||||||||||||||| ||||||| ||||||| || ||||||| ||||| |||||    
T  6144812 atgaatatacaatttttgttagcgagaacttatgaattaatataaaagcttgtttatttgcataaactatt 6144882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 16722100 - 16722170
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| |||||||||| ||||  |||  |||||||||||||||| |||||||||||||| |||||    
T  16722100 atgaagatacacttttcgttagtgagagtttataaattaagataaaagttgatttatttacataagctatt 16722170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 1576593 - 1576658
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||||| ||||||||| || ||||||    
T  1576593 ggtccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaactttta 1576658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 1608222 - 1608157
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||||| ||||||||| || ||||||    
T  1608222 ggtccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaactttta 1608157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 9477405 - 9477474
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||| |||||| ||||||||||||||  ||||||||| ||||||||||||||  |||||||||| |||||    
T  9477405 agttcatgaaggtacaattttcgttactgagaacttatgaattaagataaaaacttatttatttgcataa 9477474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 11991267 - 11991348
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||| ||||||||| || ||||| | |||||||||||||| |||||| ||||||| ||||||||| ||| |||| ||||||    
T  11991267 ggtccatttggattgacttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagc 11991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 17868113 - 17868174
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| |||||| |||||||| |||| |||||||||||||||| || ||||||    
T  17868113 cgtttggattggcttattttttagcttatggaaaatagcttatgcaaataaataacctttta 17868174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 33803874 - 33803754
Alignment:
Q  111 ttatgcaaataaacaagcttttaagta--atattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagata 208  Q
    |||||||||| || ||||||||| |||  ||||||||||   | ||||| ||||| ||||| ||||||||||| ||||  | |||||| ||| ||| |||    
T  33803874 ttatgcaaatcaataagcttttatgtactatattcataaatttgtcaaggtagtttatgaatatacaattttcattagtaaaaacttatgaagtaatata 33803775  T
Q  209 aaagtttatttatttacataa 229  Q
    ||| |||||||||||||||||    
T  33803774 aaaatttatttatttacataa 33803754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 35537025 - 35536960
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| || |||||| || ||||| |||| |||||||||||||||| |||||||||    
T  35537025 ggtccgtttggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagctttta 35536960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 40697187 - 40697122
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| ||||||||||||| |||||| |||||||| |||| ||||||| |||||||| |||||||||    
T  40697187 ggtctgtttggattggcttatttttgagcttatgaaaaatagcttatacaaataaataagctttta 40697122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 41059694 - 41059759
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||||||| |||| |||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  41059694 ggtctgtttggatgggcttatttttgagcttatgaaaaacagtttatgcaaataaataagctttta 41059759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 342318 - 342258
Alignment:
Q  74 tttggattggctaattttta-agcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| ||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  342318 tttggattggcttatttttttagcttatgaaaaatagcttatgcaaataaacaagctttta 342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 7364321 - 7364257
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||| || ||||| ||||||||| ||||||| ||||||| |||||||||| |||||    
T  7364321 atgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttatttgcataa 7364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 10537131 - 10537195
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    |||||||||||||||||| |||||| || ||||| |||| |||||||||||||| | ||||||||    
T  10537131 ggtccgtttggattggcttatttttgagtttatgaaaaatagcttatgcaaatatataagctttt 10537195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 28357215 - 28357279
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||||||| ||| ||||||  |||||| ||||||| |||||||||| |||||    
T  28357215 atgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttgcataa 28357279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 29136838 - 29136762
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctattcttttt 241  Q
    ||||||||||||||| |||| | ||| ||||| ||||||| ||||||| |||||||||| ||||| ||||| |||||    
T  29136838 atgaagatacaatttccgttggtgaggacttatgaattaacataaaagcttatttatttgcataaactatttttttt 29136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 29922095 - 29922159
Alignment:
Q  69 gtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||| |||||||| |||||| || ||||| |||| |||||||||||||||| |||||||||    
T  29922095 gtccgttttgattggcttatttttgagtttatgaaaaatagcttatgcaaataaataagctttta 29922159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 41419575 - 41419639
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||||||||  |||||| ||||||  |||||||||| |||||    
T  41419575 atgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttattttcataa 41419639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 42558627 - 42558687
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||| ||||||| |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  42558627 gtttgaattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctttta 42558687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 1576705 - 1576768
Alignment:
Q  166 tgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||| ||||| ||||||||| ||||||| |||||| | ||||||||| |||||    
T  1576705 tgaagatacaatttttgttagtgagaacttaagaattaacataaaactgtatttatttgcataa 1576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 1608110 - 1608047
Alignment:
Q  166 tgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||| ||||| ||||||||| ||||||| |||||| | ||||||||| |||||    
T  1608110 tgaagatacaatttttgttagtgagaacttaagaattaacataaaactgtatttatttgcataa 1608047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 2878779 - 2878720
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||  || ||||||||||    
T  2878779 ttttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataag 2878720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 13625529 - 13625462
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||| |||||||||||| || ||||||  |||||| |||||||||||||||||| ||||| |||||    
T  13625529 aagataaaattttcgttagtgaaaacttataaattaatataaaagtttatttatttgcataagctatt 13625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 13739243 - 13739330
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagc-ttttaagtaatattcataagcatatcaagtt 159  Q
    |||||| ||| || |||||| ||||||| |||||||||||||||| ||||| |||| ||||| ||| |||| |||||| |||||||||    
T  13739243 gtttgggttgacttatttttgagcttattcaaaacagcttatgcatataaataagctttttatgtattattgataagcttatcaagtt 13739330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 15413954 - 15414009
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||||||||||    
T  15413954 ggtctgtttggattgacttattttagagcttatgcaaaacagcttatgcaaataaa 15414009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 27805992 - 27806059
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||| ||||| || ||||||  |||||| |||||||||||||||||| ||||| |||||    
T  27805992 aagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataagctatt 27806059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 28625482 - 28625537
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    |||||||||||||||| ||||||||||||| ||||||||||| | ||||| |||||    
T  28625482 agcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtt 28625537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 40452388 - 40452443
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagct 129  Q
    |||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||    
T  40452388 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagct 40452443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 42706798 - 42706853
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    |||||||||||||||| ||||||||||||| ||||||||||| | ||||| |||||    
T  42706798 agcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtt 42706853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 2878581 - 2878647
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatg-caaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||||| |||||| ||||||||  |||| |||||||| ||||||| |||||||||    
T  2878581 ggtccgtttggattggcttattttttagcttatgaaaaaatagcttatgtaaataaataagctttta 2878647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 11912114 - 11912056
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||||||| ||||| ||||||||| ||||||| || |||| ||||||||||    
T  11912114 atgaagatacaatttttgttagtgagaacttatgaattaacatgaaagcttatttattt 11912056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 13060614 - 13060556
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||| ||| ||||||||||| ||||||||| ||||||| ||||||| ||||||||||    
T  13060614 atgaagttaccattttcgttagtgagaacttatgaattaacataaaagcttatttattt 13060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 13739407 - 13739345
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| || ||||| |||| | |||||||||||||| |||||||||    
T  13739407 ccgtttggattggcttatttttgagtttatgaaaaataacttatgcaaataaataagctttta 13739345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 35536919 - 35536988
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||  ||||||||| ||| ||| ||||||| |||||||||| ||||| |||||    
T  35536919 atgaagatacaattttcgttactgagaacttatgaa-taatataaaagcttatttatttgcataagctatt 35536988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 42852101 - 42852159
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| ||||||||| ||||||| ||||||| ||||||| || |||||    
T  42852101 atacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgcataa 42852159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 2878687 - 2878607
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctattcttttttcataagct 250  Q
    |||||||||||||| ||||| || |||||   |||||| ||||||| |||||||||||||||| |||   ||||||||||||||    
T  2878687 gaagatacaatttttgttagtgaaaacttttaaattaacataaaagcttatttatttacataagcta---ttttttcataagct 2878607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 28970197 - 28970152
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaa 118  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  28970197 gtttggattggcttatttttgagcttatgcaaaacaacttatgcaa 28970152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 29659141 - 29659198
Alignment:
Q  172 tacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||| |||| ||||||||| ||||||||||||||  |||||||||| |||||    
T  29659141 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataa 29659198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 1372112 - 1372036
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||| || |||||| |||||||||||||||| ||||| ||||||| |  |||||| ||| |||| ||||||    
T  1372112 gtttggattgacttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagc 1372036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 12987133 - 12987037
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||| |||| | |  ||||| |||| | |||||||||||||| ||||||||| ||| | ||||||||| | ||||| ||||| |||||    
T  12987133 gtttggattggcttatttctgatattatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaa 12987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 13060721 - 13060625
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||| |||| | |  ||||| |||| | |||||||||||||| ||||||||| ||| | ||||||||| | ||||| ||||| |||||    
T  13060721 gtttggattggcttatttctgatattatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaa 13060625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 15167720 - 15167656
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||  ||||| ||| ||||||| ||||||| | |||||||||||||| |||||    
T  15167720 atacaattttcgttaatgagaatttatgaattaacataaaagctaatttatttacataaactatt 15167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 26002959 - 26003039
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||||||  || |||||  ||||||| |||||||| ||||||||||||| ||| ||||| ||| |||| |||||    
T  26002959 ggtccgtttggattaacttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataag 26003039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 26003071 - 26003135
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||| |||   |||||| ||||||  ||||||||||||||||    
T  26003071 atgaagatacaattttcgttagtgagagcttgtaaattaaaataaaaacttatttatttacataa 26003135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 29418764 - 29418700
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||| ||||||||||||||| ||||| |||  |||||||||||||  |||||||||| |||||    
T  29418764 atgaaggtacaattttcgttagtgagaatttataaattaagataaaaacttatttatttgcataa 29418700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 33757054 - 33757130
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| |||||    
T  33757054 cgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataag 33757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 43319072 - 43319132
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttattta 220  Q
    |||| |||||| || |||||||||||| ||||||||| ||||||||||||||  |||||||    
T  43319072 agtttatgaaggtataattttcgttagtgagaacttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 1869019 - 1868968
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataa 122  Q
    ||||||||||||||| |||||  |||||||| |||| |||||||||||||||    
T  1869019 ccgtttggattggcttattttcgagcttatgaaaaatagcttatgcaaataa 1868968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 5559824 - 5559902
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    |||||||  ||||||||| |||||| ||||  || |||| |||||||||||||||| ||||||||| |||| ||||||||    
T  5559824 ggtccgtaaggattggcttatttttgagctcgtgaaaaatagcttatgcaaataaataagcttttatgtaa-attcataa 5559902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 7364494 - 7364435
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||||| |||||| |||| || |||| ||||||| ||||||||| ||||||||    
T  7364494 gtttggattggcttatttttgagctaatacaaagcagcttaagcaaataaaaaagctttt 7364435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 12467443 - 12467384
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| |||||| || ||||| |||| | |||||||||||||| |||||||||    
T  12467443 tttggattggcttattttttaggttatgaaaaataacttatgcaaataaataagctttta 12467384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 31637002 - 31637060
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||  |||||| |||||| | |||||||||||||||||| ||||||||||||    
T  31637002 tttggattggcatatttttgagcttacgaaaaacagcttatgcaaat-aacaagctttta 31637060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 33667513 - 33667442
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatatt 142  Q
    ||||||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| ||||    
T  33667513 ccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatt 33667442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 42558815 - 42558764
Alignment:
Q  97 ttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||||||||||||  |||||| ||||||||| ||| ||||||||||    
T  42558815 ttatgcaaaacagcttatgtgaataaataagcttttacgtactattcataag 42558764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 2577428 - 2577370
Alignment:
Q  177 ttttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||| ||||||||| ||||||| |||| | ||||||||||| ||||| |||||    
T  2577428 ttttcgttagtgagaacttatgaattaacataacaatttatttatttgcataagctatt 2577370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 3977635 - 3977589
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| |||||||  ||||||||||||||||||||| |||||||||    
T  3977635 atttttcagcttattaaaaacagcttatgcaaataaataagctttta 3977589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 5203446 - 5203376
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||| ||| ||||| |||| ||||  |||||| ||||||| |||||||||||| ||| |||||    
T  5203446 atgaagatacaaattttgttagagagagcttataaattaaaataaaagcttatttatttacgtaaactatt 5203376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 11707015 - 11706977
Alignment:
Q  95 gcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  11707015 gcttatgcaaaacagcctatgcaaataaataagctttta 11706977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 12467269 - 12467327
Alignment:
Q  111 ttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  12467269 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 12467327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 14244012 - 14243942
Alignment:
Q  62 atatatggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||| ||||||||||||| | || |||||| |||||||| |||| ||||| |||||||||| ||| ||||    
T  14244012 atatagggtccgtttggatagacttatttttgagcttatgaaaaatagcttttgcaaataaataagttttt 14243942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 20458570 - 20458500
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||||||| |  ||||||||   ||||| ||||||| |||||||||||||||| |||||    
T  20458570 atgaaaatacaattttcgttggtcagaacttatagattaaaataaaagcttatttatttacataagctatt 20458500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 28625657 - 28625596
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||| ||||||| ||||||| ||||||| |||| | |||||||||||||| |||||||||    
T  28625657 ccgtttgaattggcttattttta-gcttatgaaaaataacttatgcaaataaataagctttta 28625596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 41125852 - 41125790
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| || ||||| |||| ||||| |||||||| | |||||||||    
T  41125852 ccgtttggattggcttatttttgagtttatgaaaaatagcttttgcaaatatataagctttta 41125790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 42852183 - 42852137
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| | ||||||||||||||||||||||| |||| |||||||||    
T  42852183 attttttaacttatgcaaaacagcttatgcaactaaataagctttta 42852137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 1576809 - 1576756
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaa-cagcttatgcaaataaa 123  Q
    ||||||||||||||| |||||| |||||||| ||||  ||||||||||||||||    
T  1576809 ccgtttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaa 1576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 1608006 - 1608059
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaa-cagcttatgcaaataaa 123  Q
    ||||||||||||||| |||||| |||||||| ||||  ||||||||||||||||    
T  1608006 ccgtttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaa 1608059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 1868920 - 1868969
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtt 214  Q
    |||||||||||||||||||||| |||||| ||  |||||| |||||||||    
T  1868920 atgaagatacaattttcgttagtgagaacgtatcaattaacataaaagtt 1868969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 33732495 - 33732375
Alignment:
Q  111 ttatgcaaataaacaagcttttaagta--atattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagata 208  Q
    |||||||||| || ||||||||| |||  ||||||||||   | ||||  ||||| ||||| ||||||||||| | ||  | |||||| ||| ||| |||    
T  33732495 ttatgcaaatcaataagcttttatgtactatattcataaatttgtcaaagtagtttatgaatatacaattttcatcagtaaaaacttatgaagtaatata 33732396  T
Q  209 aaagtttatttatttacataa 229  Q
    ||| |||||||||||||||||    
T  33732395 aaaatttatttatttacataa 33732375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 39154669 - 39154730
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||||||| ||| || | ||| || |||| |||||||||||||||| ||||||||    
T  39154669 ccgtttggattggcttattattgaacttctgaaaaatagcttatgcaaataaataagctttt 39154730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 41059873 - 41059824
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaag 157  Q
    |||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  41059873 agcttatgcaaacaaataagcttttatgtattattcataagcttatcaag 41059824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 6125462 - 6125402
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| ||  ||||| | |||||| |||| |||||||||||||||| |||||||||    
T  6125462 gtttggattgacttctttttgaacttatgaaaaatagcttatgcaaataaataagctttta 6125402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 6144898 - 6144854
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||||||| |||| || |||||||||||||||||||||||    
T  6144898 ttttgagcttatgaaaaatagtttatgcaaataaacaagctttta 6144854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 7565276 - 7565220
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttat 221  Q
    |||||| ||||||||||||||| ||||| ||| ||| ||||||||||  ||||||||    
T  7565276 atgaaggtacaattttcgttagtgagaatttatgaactaagataaaaacttatttat 7565220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 11706826 - 11706878
Alignment:
Q  78 gattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctt 130  Q
    |||||||| |||||| |||||||  |||| |||||||||||||||| ||||||    
T  11706826 gattggcttattttttagcttatcaaaaatagcttatgcaaataaataagctt 11706878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 29657981 - 29658025
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| ||||||||||||||| |||||||||| ||| |||||||||    
T  29657981 ttttgagcttatgcaaaacaacttatgcaaaaaaataagctttta 29658025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 41534628 - 41534680
Alignment:
Q  111 ttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    ||||||||||||| ||||||||| ||| ||||||||||| | ||||| |||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 41534680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 40629535 - 40629399
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagat 172  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||| || | |||| ||| ||||||||||| | ||||| ||||| ||||||||    
T  40629535 gtttggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaac-tttatgtattattcataagcttgtcaaggtagtttatgaagat 40629437  T
Q  173 acaattttcgttagcgagaacttacgaattaagataaa 210  Q
    || ||||| ||| | ||||||||| ||||||| |||||    
T  40629436 actatttttgtttgtgagaacttatgaattaatataaa 40629399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 46744027 - 46744096
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctat 234  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||| ||||    
T  46744027 atgaagatacaattttcgttagtgagaacttacgaattaacataaaagcttatttattttcataagctat 46744096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 34922885 - 34922973
Alignment:
Q  60 atatatatggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||| | ||||||||||||||| |||||| |||| | |||||||| |||||||||||||| ||||||||| ||| ||||||||||    
T  34922885 atatatatagcccgtttggattggcttatttttcagctaacgcaaaacaacttatgcaaataaataagcttttatgtattattcataag 34922973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 38372525 - 38372600
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||    
T  38372525 gtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataag 38372600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 18837189 - 18837265
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| |  ||| |||||||||||    
T  18837189 gtttggattggcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataagc 18837265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 29390671 - 29390493
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa- 169  Q
    ||||||||||||||| |||||| || ||||| |||||| |||||||||||||| || |||| | ||| ||||||||||| | | ||| ||||| |||||     
T  29390671 ccgtttggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaa 29390572  T
Q  170 -------------gatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
                 |||||||||||||||||| |||| ||| ||||||| ||||||| |||||||||| ||||| |||||    
T  29390571 aacaacttatgaagatacaattttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatt 29390493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 30181516 - 30181607
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    ||||||||||| || |||||| ||||||||||| ||| |||| ||||||||| ||||||||| ||| ||||||||||| | ||||| |||||    
T  30181516 cgtttggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtt 30181607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 24371527 - 24371403
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaag 170  Q
    ||||||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||| | ||| |||| |||||  | | ||| ||||| ||||||    
T  24371527 ccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagttttaatgtattatttataag-tttttaaggtagtttatgaag 24371429  T
Q  171 atacaattttcgttagcgagaactta 196  Q
    |||||||||||||||| |||| ||||    
T  24371428 atacaattttcgttagtgagagctta 24371403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 33205015 - 33204950
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||||| |||||| |||||||| |||| | |||||||||||||| |||||||||    
T  33205015 ggtccgtttggattggcttattttttagcttatgaaaaatatcttatgcaaataaataagctttta 33204950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 47654431 - 47654362
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||||||||||  |||||||||| |||||    
T  47654431 agtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataa 47654362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 37779395 - 37779337
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||||    
T  37779395 tttggattggcttattttta-gcttatacaaaacagcttatgcaaataaataagctttta 37779337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 44613571 - 44613516
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||||||||||||||||||||| |||||||||  || |||||||||||    
T  44613571 agcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagc 44613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14691311 - 14691253
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||||||| |||||||||||| ||||||||| ||||||| ||||||| ||||||||||    
T  14691311 atgaagatataattttcgttagtgagaacttatgaattaacataaaaggttatttattt 14691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 29378719 - 29378789
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||||||  |||||||| |||||||  |||||| |||||||||| ||||| |||||    
T  29378719 atgaagatacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataagctatt 29378789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 22032836 - 22032900
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||| ||||||||||||||| |||||||||  |||||||||||||  |||||||||| |||||    
T  22032836 atgaaggtacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcataa 22032900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 991573 - 991643
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| |||||||||| ||||  |||  |||||| ||||||| |||||||||||||||| |||||    
T  991573 atgaagatacacttttcgttagtgagagtttataaattaaaataaaagcttatttatttacataagctatt 991643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 7774759 - 7774689
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||| | ||||  |||  ||||||  ||||||||||||||||||||||| |||||    
T  7774759 atgaagatacaattttcgttggtgagagtttataaattaaattaaaagtttatttatttacataaactatt 7774689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 23137175 - 23137105
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||| |||| |||| ||||  |||||| ||||||| ||| |||||||||||| |||||    
T  23137175 atgaagatacaattttcattagtgagagcttataaattaaaataaaagcttacttatttacataagctatt 23137105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 29378823 - 29378761
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| || |||||| || ||||| |||| |||||||||||||||| |||||||||    
T  29378823 ccgtttggattgacttatttttgagtttatgaaaaatagcttatgcaaataaataagctttta 29378761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 35331109 - 35331159
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||||||||| || |||||  ||||||||||||||||||||||||||||||    
T  35331109 gtttggattgacttattttgtagcttatgcaaaacagcttatgcaaataaa 35331159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 34923110 - 34923049
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| ||||||| |||||| |||||||  |||| |||||||||||||||| |||||||||    
T  34923110 cgtttgaattggcttatttttgagcttataaaaaatagcttatgcaaataaataagctttta 34923049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 35809052 - 35809133
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||||||||| |||||  ||||||| |||| || |||||||||||||| |||| || | ||| |||| ||||||    
T  35809052 ggtccgtttggattggcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagc 35809133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 37465895 - 37465834
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||| || ||| ||||||||||| ||||||| ||||||| |||||||||| |||||    
T  37465895 aagatacaatatttgttggcgagaacttatgaattaatataaaagcttatttatttgcataa 37465834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 43818883 - 43818826
Alignment:
Q  172 tacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||| |||| ||||||||| ||||||||||||||  |||||||||| |||||    
T  43818883 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataa 43818826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 29390461 - 29390521
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| || |||||| |||||||| |||| || ||||||||||||| |||||||||    
T  29390461 gtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagctttta 29390521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 44799470 - 44799546
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||| ||| |||||||| |||| ||||  |||||| ||||||  |||||||||||||||| |||||    
T  44799470 tagtttatgaagatagaatattcgttagtgagagcttataaattaaaataaaaacttatttatttacataaactatt 44799546  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 12473189 - 12473248
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| ||||||||||||||| |||||||||| ||| ||| ||||| ||| ||||||||||    
T  12473189 ttttgagcttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataag 12473248  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 18765124 - 18765065
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagat-aaaagtttatttattt 223  Q
    |||||||||||||||| ||||| |||||||| | |||||| || ||||||||||||||||    
T  18765124 atgaagatacaatttttgttagtgagaacttgcaaattaatataaaaagtttatttattt 18765065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 22575655 - 22575730
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||||||||  ||| ||||  |||||| ||||||  |||||||| ||||||| |||||    
T  22575655 agtttatgaagatacaattttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatt 22575730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 23120023 - 23119964
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| ||||||||||||||| | |||||||||||| || |||| ||||| ||||||||||    
T  23120023 ttttgagcttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataag 23119964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 26331778 - 26331837
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    |||||||||| || || ||| ||||||||||||| |||||||| ||||||| ||||||||    
T  26331778 gtttggattgacttatgtttgagcttatgcaaaatagcttatgtaaataaataagctttt 26331837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 28004546 - 28004625
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    ||||| |||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| ||||    
T  28004546 ggtccatttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 28004625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 35246743 - 35246806
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacata 228  Q
    |||| ||||||||||||||||| |||  ||||  |||||| ||||||| |||||||||||||||    
T  35246743 atgaggatacaattttcgttagtgagggcttataaattaaaataaaagcttatttatttacata 35246806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 1312187 - 1312257
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||| ||||| |||| ||||  |||  |||||| |||||||||||||||||||||||| |||||    
T  1312187 atgaatatacacttttcattagtgagagtttataaattaaaataaaagtttatttatttacataagctatt 1312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 16932942 - 16932872
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||||||  | | ||||  |||||| ||||||| |||||||| ||||||| |||||    
T  16932942 atgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatt 16932872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 16938325 - 16938255
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||||||  | | ||||  |||||| ||||||| |||||||| ||||||| |||||    
T  16938325 atgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatt 16938255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 16958889 - 16958959
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||||||  | | ||||  |||||| ||||||| |||||||| ||||||| |||||    
T  16958889 atgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatt 16958959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 22032729 - 22032807
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcat 151  Q
    ||||||||| ||| |||||  |||||||| |||||| |||||||||||||| | | ||||| ||| |||| ||||||||    
T  22032729 gtttggattagcttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcat 22032807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 25908472 - 25908410
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| || ||||| ||||  ||||||||||||||| ||| |||||    
T  25908472 ccgtttggattggcttatttttgaggttatgaaaaatggcttatgcaaataaataagttttta 25908410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 28004657 - 28004727
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||| |||||| ||| ||| ||||  |||||| ||||||| |||||||||| ||||| |||||    
T  28004657 atgaagatacaaatttcgtcagcaagagcttataaattaaaataaaagcttatttatttgcataagctatt 28004727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 33288087 - 33288029
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||||||||| |||||||||| || |||||| ||||||| ||||||  ||||||||||    
T  33288087 atgaagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttattt 33288029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 38372640 - 38372690
Alignment:
Q  173 acaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||||| ||||||||| ||||||| ||||||| | ||||||||    
T  38372640 acaattttcgttagtgagaacttatgaattaacataaaagctgatttattt 38372690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 38372736 - 38372674
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| | |||||| |||||||| |||| |||| |||||||||||  ||||||||    
T  38372736 ccgtttggattgggttatttttgagcttatgaaaaatagctaatgcaaataaatcagctttta 38372674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 14675977 - 14675912
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttac 225  Q
    |||| ||||||||||||||||| ||||||| | ||||  |||||| ||||||  ||||||||||||    
T  14675977 agtttatgaagatacaattttcattagcgaaagcttataaattaaaataaaaacttatttatttac 14675912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 40629343 - 40629392
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataa 122  Q
    ||||||||||||| |||||| |||||||| |||| |||||| ||||||||    
T  40629343 gtttggattggcttatttttgagcttatgaaaaatagcttaggcaaataa 40629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 41677449 - 41677522
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctattctt 238  Q
    |||||||||||||||| ||| | ||||||||  |||||||  |||||| |||||||||| ||||  ||||||||    
T  41677449 atgaagatacaattttagtttgtgagaacttgtgaattaacttaaaagattatttatttgcataggctattctt 41677522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 47511045 - 47511086
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  47511045 agcttatgcaaataaataagcttttatgtattattcataagc 47511086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 48021662 - 48021605
Alignment:
Q  163 taatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttattta 220  Q
    ||||||||||||||||||| |||| || |||||| ||||||| ||||||  |||||||    
T  48021662 taatgaagatacaattttcattagtgaaaacttatgaattaatataaaaaattattta 48021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 33287985 - 33288045
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||||||| |||  ||||||| |||||||| ||| |||||    
T  33287985 gtttggattggcttatttttgagcttatgaaaactagcttatccaaataaataagttttta 33288045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 73 - 235
Target Start/End: Original strand, 23297405 - 23297579
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagt---------- 162  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||  | ||||| ||||              
T  23297405 gtttggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaaaca 23297504  T
Q  163 --taatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
      | |||||||||||||||| ||||||||||||||| ||||||  ||||||| |||||||||| ||||| |||||    
T  23297505 gcttatgaagatacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatt 23297579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 235
Target Start/End: Original strand, 11298581 - 11298726
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt----aatgaagatacaattttcgttagcga 189  Q
    ||||||||||||||||||||||||| |||  |||||||||  || ||||||| ||| | | ||| |||||    |||||||||| | |||||||||| ||    
T  11298581 agcttatgcaaaacagcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaatgaagataaagttttcgttagtga 11298680  T
Q  190 gaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||| ||||||  |||||||||||||||||| ||||| |||||    
T  11298681 gaacttaagaattattataaaagtttatttatttgcataagctatt 11298726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 48686958 - 48687078
Alignment:
Q  115 gcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtt 214  Q
    ||||||||| ||| ||||| ||| ||||||||||| | ||||  ||||| || |||||||||||||| |||| ||||||||| ||||||| ||| |||||    
T  48686958 gcaaataaataagtttttatgtactattcataagcttgtcaacgtagtttataaagatacaattttcattagtgagaacttatgaattaacatataagtt 48687057  T
Q  215 tatttatttacataatctatt 235  Q
    ||||||||| ||||| |||||    
T  48687058 tatttatttgcataagctatt 48687078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 29877606 - 29877682
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||| ||||||||| ||| |||||||||||    
T  29877606 gtttggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagc 29877682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 38345945 - 38345865
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||||||| || || ||| ||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  38345945 ggtccgtttggattgacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag 38345865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 35124355 - 35124450
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||| | || |||||| ||| ||||||||||| | ||||| ||||| |||||    
T  35124355 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaa 35124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 11256673 - 11256603
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  11256673 atgaagatacaattttagttagcgagaacttatgaattaacataaaagcttatttatttgcataaactatt 11256603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 22273854 - 22273924
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||| ||||| ||| ||||||| |||||||||||||||||| |||||||||||    
T  22273854 atgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataatctatt 22273924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 8130457 - 8130530
Alignment:
Q  75 ttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||| | | ||||||||||    
T  8130457 ttggattggcttattttttagcatatgcaaaacagcttatgcaaataaataagcttttatgcattattcataag 8130530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 42611987 - 42611910
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttt-taagtaatattcataagc 149  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||| || ||| |||||||||||    
T  42611987 gtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagc 42611910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 48667849 - 48667786
Alignment:
Q  70 tccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||| ||||||||||| ||| |||| |||||||||||||||| |||||||||    
T  48667849 tccgtttggattggcttatttttaagctcatgaaaaatagcttatgcaaataaataagctttta 48667786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 34633364 - 34633426
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||||||||||| || ||||||    
T  34633364 ccgtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataaactttta 34633426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 38345834 - 38345764
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||  ||||| |||||||| ||||||| ||||||| |||||||||||||||| |||||    
T  38345834 atgaagatacaatttttattagccagaacttatgaattaacataaaagcttatttatttacataagctatt 38345764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 43699604 - 43699526
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||||||| |||||| |||||||| |||||| ||||| |||||||| ||||||||| ||  |||||||||||    
T  43699604 ccgtttggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagc 43699526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 3564182 - 3564283
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatg 167  Q
    ||||||||||||||| ||  ||||| |||||||||||||||||||||| ||||||| || ||||||  || ||||||||||  | ||||| ||||| |||    
T  3564182 ggtccgtttggattgacttgtttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatg 3564281  T
Q  168 aa 169  Q
    ||    
T  3564282 aa 3564283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 48591329 - 48591394
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||| |||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  48591329 ggtccatttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctttta 48591394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 12495764 - 12495689
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||| || ||| || ||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  12495764 gtttggattggttattttata-gcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagc 12495689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 36741080 - 36741021
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||||||| ||||||||    
T  36741080 gtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagctttt 36741021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 29877713 - 29877783
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||| ||||||||| ||||||| ||||||| |||| ||||| ||||| |||||    
T  29877713 atgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatt 29877783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 34526349 - 34526279
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||  ||| ||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  34526349 atgaagatacaattttccatagtgagaacttatgaattaacataaaagcttatttatttgcataaactatt 34526279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 42153070 - 42153132
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| |||||| | |||| |||||||||||||||| |||||||||    
T  42153070 ccgtttggattggcttatttttgagcttacgtaaaatagcttatgcaaataaataagctttta 42153132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 48591436 - 48591366
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||  ||||||||| |||||||  |||||| |||||||||| ||||| |||||    
T  48591436 atgaagatacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagctatt 48591366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 4603349 - 4603280
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||| |||||||||||||||||||||| ||||  |||  |||||| ||||||| ||||||||||||||||    
T  4603349 agtttatgaagatacaattttcgttagtgagagtttataaattaaaataaaagcttatttatttacataa 4603280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 42617350 - 42617273
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||| ||| |||||  ||||||| |||||||||||||||||||||| | | ||||||||| |||| |||||    
T  42617350 ccgtttggattagcttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataag 42617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 948037 - 948113
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    ||||||||| || || | |||| ||||||||||||| |||||||| ||||||| ||||||||| ||| |||||||||    
T  948037 ccgtttggaatgacttactttttagcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataa 948113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 22273761 - 22273821
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaa 134  Q
    ||||||||| || |||||| |||||||||| || |||||||||||||||| ||||||||||    
T  22273761 tttggattgacttatttttgagcttatgcataatagcttatgcaaataaataagcttttaa 22273821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 40699321 - 40699373
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||| |||||||||| ||| || ||||||||||||||||||||||||||||||    
T  40699321 ccgtctggattggcttattattgagcttatgcaaaacagcttatgcaaataaa 40699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 488393 - 488326
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||  |||| ||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  488393 aagatacaatttttattagtgagaacttatgaattaacataaaagcttatttatttccataagctatt 488326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 1374481 - 1374422
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| |||||| ||||||||||||| | |||||||||||||| ||| |||||    
T  1374481 tttggattggcttatttttgagcttatgcaaaaaaacttatgcaaataaaaaagttttta 1374422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 19414192 - 19414259
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||| |||| ||||  || ||| ||||||| |||||||||||||||| |||||    
T  19414192 aagatacaattttcgttagtgagagcttataaagtaaaataaaagcttatttatttacataagctatt 19414259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 36740973 - 36741048
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||| |||| ||||||||| |||| || | ||||| |||||||||| ||||| |||||    
T  36740973 agttcatgaagatacaattttcattagtgagaacttatgaatcaacacaaaagcttatttatttgcataagctatt 36741048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 15179891 - 15179961
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||||||||  ||||||||   ||||| ||||||| |||||||||||||||| |||||    
T  15179891 atgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagctatt 15179961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 17222903 - 17222961
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||||||||||||||||||||  |||||||| ||||||| ||||||  ||||||||||    
T  17222903 atgaagatacaattttcgttagttagaacttatgaattaacataaaaacttatttattt 17222961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 23284803 - 23284733
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| |||| ||||  |||||| ||||||  |||||||||||| ||| |||||    
T  23284803 atgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacctaaactatt 23284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 28074438 - 28074508
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||||||||| |||||  ||| ||| ||||||  |||||||||| ||||| |||||    
T  28074438 atgaagatacaattttcgttagcgaaaacttgtgaaataacataaaatcttatttatttgcataagctatt 28074508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 36255048 - 36254978
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||  |||| ||||||||| ||||||| ||||||| |||||||| | ||||| |||||    
T  36255048 atgaagatacaattttaattagtgagaacttatgaattaacataaaagcttatttatctgcataagctatt 36254978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 41228977 - 41229047
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||| ||||  |||||||| ||||||| ||||||| | |||||||| ||||| |||||    
T  41228977 atgaagatacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatt 41229047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 488289 - 488354
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| || | ||||||||||||  |||| |||||||| ||||||| |||||||||    
T  488289 ggtccgtttggattgacttacttttaagcttataaaaaatagcttatggaaataaataagctttta 488354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 3564383 - 3564322
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||| || |||||| |||||||| |||| |||||||||||||||| || ||||||    
T  3564383 cgtttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatctttta 3564322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 10795040 - 10794959
Alignment:
Q  61 tatatatggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatatt 142  Q
    |||||| |||||||||| |||| || |||||  ||||||||||||||||||| || ||||||| ||| ||||| ||| ||||    
T  10795040 tatatagggtccgtttgaattgacttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatt 10794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 10796341 - 10796422
Alignment:
Q  61 tatatatggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatatt 142  Q
    |||||| |||||||||| ||||||| |||||  ||||||||||||||| ||| || ||||||| ||| ||||| ||| ||||    
T  10796341 tatatagggtccgtttgaattggcttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatt 10796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 12495549 - 12495614
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| || |||||| |||||||| |||  |||||||||||||||| ||| |||||    
T  12495549 ggtccgtttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagttttta 12495614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 23335644 - 23335705
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||||||  || ||||| ||| ||||||||||||||||||| ||||| |||||    
T  23335644 agcttatgcaaataaatgagattttatgtattattcataagcatatcaaggtagtttatgaa 23335705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 2330485 - 2330429
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttat 221  Q
    ||||||||||||||||| || | ||||||||| ||| ||| ||||||||||||||||    
T  2330485 atgaagatacaattttcatttgtgagaacttatgaaataaaataaaagtttatttat 2330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 14987604 - 14987548
Alignment:
Q  173 acaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||| ||||||||| ||||||| ||||||  ||||||||||| ||||    
T  14987604 acaattttcgttagtgagaacttatgaattaatataaaaacttatttatttatataa 14987548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 17223005 - 17222945
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||||||| |||| ||||||| |||||||| ||| |||||    
T  17223005 gtttggattggcttatttttgagcttatgaaaaatagcttattcaaataaataagttttta 17222945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 18424382 - 18424322
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    |||||| |||||||||||||||  |||| |||||||| ||||||||| ||| |||||||||    
T  18424382 atttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataa 18424322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 28074368 - 28074428
Alignment:
Q  109 gcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 28074428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 35405851 - 35405799
Alignment:
Q  81 tggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||| |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  35405851 tggcttattttttagcttatgaaaaatagcttatgcaaataaataagctttta 35405799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 42617248 - 42617172
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||  ||||||||||| || ||||||  |||||| ||||||  |||||||||||||||| |||||    
T  42617248 tagtttatgaagatatgattttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatt 42617172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 47202899 - 47202963
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||| ||||  |||||| ||||||| ||| ||||||| ||||    
T  47202899 atgaagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataa 47202963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 2702839 - 2702784
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||| ||||||||||||| |||||  |||||||||||| ||||||||||| |||||    
T  2702839 ggtctgtttggattggcttattttagagcttatgcaaagcagcttatgcacataaa 2702784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 7148774 - 7148829
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| | ||||| |||||    
T  7148774 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 7148829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 15184615 - 15184666
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaa 211  Q
    |||| |||||||||||||||||||||| |||||||||  |||||| ||||||    
T  15184615 agtttatgaagatacaattttcgttagtgagaacttataaattaaaataaaa 15184666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 28074539 - 28074480
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| |||||| || ||||| |||| |||||||||||||||| ||| |||||    
T  28074539 tttggattggcttattttttagtttatgaaaaatagcttatgcaaataaataagatttta 28074480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 39931556 - 39931493
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacata 228  Q
    |||||||||||||||||||||| |||| ||||  || ||| ||||||  |||||||||||||||    
T  39931556 atgaagatacaattttcgttagtgagagcttataaaataaaataaaaacttatttatttacata 39931493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 42153171 - 42153104
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||||| || |||| | ||||||| ||||||| |||||||||| ||||| |||||    
T  42153171 aagatgcaattttcgttagtgacaactcatgaattaacataaaagcttatttatttgcataagctatt 42153104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 52700562 - 52700491
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaa-ttaagataaaagtttatttatttacataa 229  Q
    ||||| |||||||||| |||||||||||  ||||||||  || |||| ||||||| ||||||||||||||||    
T  52700562 tagtttatgaagatacgattttcgttagtaagaacttataaaattaacataaaagattatttatttacataa 52700491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 825846 - 825812
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaa 105  Q
    |||||||||||||||||||||| ||||||||||||    
T  825846 ccgtttggattggctaattttttagcttatgcaaa 825812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 897048 - 897114
Alignment:
Q  169 agatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||| ||||||||||| || ||||||  |||||| ||||||| |||||||||| ||||| |||||    
T  897048 agatacgattttcgttagtgaaaacttataaattaatataaaagcttatttatttgcataaactatt 897114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 3966815 - 3966873
Alignment:
Q  177 ttttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||| ||||  |||||| ||||||  |||||||||||||||| |||||    
T  3966815 ttttcgttagcgagagcttataaattaaaataaaaacttatttatttacataagctatt 3966873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 18424290 - 18424232
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||||||| ||||  || |||||| ||||||| ||||||| ||||||||||    
T  18424290 atgaagatacaatttttgttattgaaaacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 23297597 - 23297551
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  23297597 atttttgagcttatgaaaaatagcttatgcaaataaataagctttta 23297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 30956862 - 30956800
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| ||||||| || |||||| |||||||| |||| |||||||||||||||| ||| |||||    
T  30956862 ccgtatggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagttttta 30956800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 38345731 - 38345792
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| |||||||  |||| |||||||| ||||||| |||||||||    
T  38345731 ccgtttggattggcttatttttgagcttat-aaaaatagcttatgtaaataaataagctttta 38345792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 46175997 - 46175927
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| |||||||||||||||||| |||  ||| ||||  |||||| ||||| | ||||||||||||||||    
T  46175997 tagtttatgaagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttatttacataa 46175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 7148948 - 7148888
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||| || |||| | |||||||| |||| |||||||||||||||| |||||||||    
T  7148948 cgtttggattgacttatttctgagcttatg-aaaatagcttatgcaaataaataagctttta 7148888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 9201735 - 9201788
Alignment:
Q  176 attttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| ||||  |||||| ||||||  ||||||||||||||||    
T  9201735 attttcgttagcgagagcttataaattaaaataaaaacttatttatttacataa 9201788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 9319117 - 9319186
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||| |||||| |||||||||| |||  || ||||||  |||||| ||||||| ||||||||||||||||    
T  9319117 agtttatgaagctacaattttcattactgaaaacttaaaaattaacataaaagcttatttatttacataa 9319186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 31022477 - 31022538
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| || || |||||| |||||||| |||| | |||||||||| |||||    
T  31022477 aagatacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataa 31022538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 32628853 - 32628922
Alignment:
Q  166 tgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||  | || ||||||||||||||||| ||||||||   | ||||||||||| |||||    
T  32628853 tgaagatacaattttgatcagtgagaacttacgaattaacataaaagtaggtatatttacataagctatt 32628922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 42611778 - 42611839
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacag-cttatgcaaataaacaagctttta 133  Q
    ||||||||||||  ||||||||||||||| |||| ||  ||||||||||||| |||||||||    
T  42611778 gtttggattggcgtatttttaagcttatgaaaaatagatttatgcaaataaataagctttta 42611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 46176096 - 46176023
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    |||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| ||||    
T  46176096 tttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 46176023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 55638162 - 55638125
Alignment:
Q  111 ttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  55638162 ttatgcaaataaacaagcttttatgtattattcataag 55638125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 7148852 - 7148916
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| ||||  |||||||| ||||||  ||||||| |||||||||| ||||| |||||    
T  7148852 atacaattttctttagtcagaacttatgaattagcataaaagcttatttatttgcataagctatt 7148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 7206689 - 7206645
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||||||||| |||||||||||||||| || |||||||||    
T  7206689 ttttgagcttatgcagaacagcttatgcaaatgaataagctttta 7206645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 9153588 - 9153524
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| | || ||||| |||  |||||| |||||||||||||||||| ||||| |||||    
T  9153588 atacaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataagctatt 9153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 18630821 - 18630865
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||||||| |||| |||||||||||||||| |||||||||    
T  18630821 ttttgagcttatgaaaaatagcttatgcaaataaataagctttta 18630865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 19414097 - 19414165
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatatt 142  Q
    |||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| ||||    
T  19414097 tttggattagcttattttagagcttatagaaaacagcttatgcaaataaataagtttttatgtattatt 19414165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 27368248 - 27368196
Alignment:
Q  96 cttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||| |||||| |||||||||||||| |||||||||  || ||||||||||    
T  27368248 cttatgtaaaacaacttatgcaaataaataagcttttatatattattcataag 27368196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 32628747 - 32628787
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagctt 112  Q
    ||||||||||| || |||||| |||||||||||||||||||    
T  32628747 cgtttggattgtcttatttttgagcttatgcaaaacagctt 32628787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 34633470 - 34633522
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||||||||| | || ||||||||| ||||||| ||||||| ||||||||||    
T  34633470 atacaattttcataagtgagaacttatgaattaacataaaagcttatttattt 34633522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 35405653 - 35405701
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataa 122  Q
    ||||||||| || |||||| ||||||||||||||| ||||| |||||||    
T  35405653 tttggattgacttatttttgagcttatgcaaaacaacttatacaaataa 35405701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 36255163 - 36255102
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| ||||| | |||||| ||||||||||||||||    |||||||||| |||||||||    
T  36255163 ggtccgtttgtattggattatttttgagcttatgcaaaacag----tgcaaataaataagctttta 36255102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 40699434 - 40699498
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||| ||||||| || ||||||||| ||||||| ||||||  |||||| ||| |||||    
T  40699434 atgaagatacagttttcgtaagtgagaacttatgaattaacataaaatcttatttgtttgcataa 40699498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 41071526 - 41071466
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| || ||| |||||||| |||| |||||| | ||||||| |||||||||    
T  41071526 gtttggattggcttatattttagcttatgaaaaatagcttaagaaaataaataagctttta 41071466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 43415274 - 43415230
Alignment:
Q  191 aacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||| ||||||| |||||| ||||||||||||||||| |||||    
T  43415274 aacttatgaattaacataaaaatttatttatttacataaactatt 43415230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 4068080 - 4068253
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagt-------- 162  Q
    ||||||||||||||| |||||| ||||| ||||||| ||||| |||||||||| ||||||||| ||| ||||||||||| | ||||| ||||            
T  4068080 ccgtttggattggcttattttttagcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 4068179  T
Q  163 -------taatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
           | |||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||| |||||    
T  4068180 aaacaacttatgaagatactattttcgttagtgagaacttatgaattaatataaaagtttatttatttgcataa 4068253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 391133 - 391194
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||    
T  391133 ccgtttggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagctttt 391194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 8410155 - 8410277
Alignment:
Q  112 tatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaa 211  Q
    |||||||||||| ||| ||||| ||| ||||||||||  | | |||| |||| |||||||||||||||||||||| |||| |||   |||||| ||||||    
T  8410155 tatgcaaataaataagtttttatgtattattcataagtttttaaagt-agtttatgaagatacaattttcgttagtgagagcttgtaaattaaaataaaa 8410253  T
Q  212 gtttatttatttacataatctatt 235  Q
    | ||||||||||||| || |||||    
T  8410254 gcttatttatttacagaagctatt 8410277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 32497289 - 32497214
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| |||| ||||||||||||||||| |||| ||||  |||||| |||||||||||||||||||||||| |||||    
T  32497289 agtttatgaggatacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataagctatt 32497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 6337768 - 6337698
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||| ||| ||||| |||||    
T  6337768 atgaagatacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgcataagctatt 6337698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 15515359 - 15515289
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| ||||||||| ||||||| || |||| |||||||||||| ||| |||||    
T  15515359 atgaagatacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttacttaagctatt 15515289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 15791453 - 15791527
Alignment:
Q  161 gttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||||||  |||| ||||  |||||| ||||||| |||||||||||||||| |||||    
T  15791453 gttaatgaagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatt 15791527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 37712141 - 37712211
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||| |||||||||  |||||||| ||||||| |||||||||||||||||| ||||| |||||    
T  37712141 atgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataagctatt 37712211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 47413548 - 47413488
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  47413548 gtttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctttta 47413488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 48819475 - 48819415
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  48819475 gtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagctttta 48819415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 13039021 - 13039091
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||| | |||||||||| ||||| ||| ||||||| |||||||||||||||||| ||||| |||||    
T  13039021 atgaagataaagttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatt 13039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 17628437 - 17628367
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| |||| |||   |||||| ||||||| |||||||||||||||| |||||    
T  17628437 atgaagatacaattttcgttagtgagagcttctaaattaaaataaaagcttatttatttacataagctatt 17628367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 18327489 - 18327587
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||| || |||||  |  |||| |||||||||||||||||||||| ||||||||| ||| || |||||||| | ||||| ||||| |||||    
T  18327489 ccgtttggattgacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaa 18327587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 35897743 - 35897645
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaag 170  Q
    |||||||||||  | ||||||||| |||||||||||| |||||||||||||| ||| |||||  || ||||||||||| | ||||  ||||| ||||||    
T  35897743 cgtttggattgatttatttttaaggttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaag 35897645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 48819373 - 48819443
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| |||| ||||| ||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  48819373 atgaagatacattttttgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctatt 48819443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 391251 - 391308
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagat-aaaagtttatttattt 223  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||    
T  391251 gaagatacaattttcgttagcgagaacttatgaattaacataaaaagcttatttattt 391308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 41576413 - 41576336
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctattc 236  Q
    ||||| ||||||||| |||||| ||||| || ||||||   ||||| |||||||||||||||||| ||||||||||||    
T  41576413 tagtttatgaagatataatttttgttagtgataacttatatattaacataaaagtttatttatttgcataatctattc 41576336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 51409791 - 51409678
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaacttacgaattaagat 207  Q
    |||||||||||||||| ||| || || ||| ||||||||||  | | ||  ||||| ||||||||||| ||||| || | |||||||||  |||||| ||    
T  51409791 agcttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaagatacagttttcatttgtgagaacttataaattaatat 51409692  T
Q  208 aaaagtttatttat 221  Q
    ||||||||||||||    
T  51409691 aaaagtttatttat 51409678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 31249750 - 31249814
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||| ||||||||||||||||| |||| |||||  || ||||||| ||||||||||||||||||    
T  31249750 tagtttatgaagatacaattttcattagtgagaatctatgaattaatataaaagtttatttattt 31249814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 37329424 - 37329360
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||| | |||||||||  |||||| ||||||| |||||||||| |||||    
T  37329424 atgaagatacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataa 37329360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 42367128 - 42367076
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    ||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||    
T  42367128 ccgtttggatttgcttatttttaagcttatgaaaaatagcttatgcaaataaa 42367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 46689562 - 46689498
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| ||| |||||||||||| ||||||||| ||||||| |||| ||||||||||||| |||||    
T  46689562 atgaaaataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataa 46689498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 20169247 - 20169306
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||| ||| |||| |||||    
T  20169247 ttttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataag 20169306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 22593338 - 22593377
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  22593338 agcttatgcaaaacagcttatgcaaataaataagctttta 22593377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 26946014 - 26946073
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    |||||||||| || |||||| |||||||| ||| ||||||||| ||||||||||||||||    
T  26946014 gtttggattgacttatttttgagcttatgaaaatcagcttatgtaaataaacaagctttt 26946073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 37148211 - 37148116
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||| || ||||| ||||||||||||| ||||||||||||||||| |||| || | ||| |||| ||||| || | ||| ||||| |||||    
T  37148211 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaa 37148116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 37157036 - 37156941
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||| || ||||| ||||||||||||| ||||||||||||||||| |||| || | ||| |||| ||||| || | ||| ||||| |||||    
T  37157036 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaa 37156941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 41196621 - 41196680
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| |||||| |||||||| |||| |||||||||||||||| |||| ||||    
T  41196621 tttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataagccttta 41196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 5243422 - 5243352
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| |||||||||||||||||||||  |||| | ||  |||||| ||||||| ||||||||||||||||    
T  5243422 tagtttatgaagatacaattttcgttacggagagcatataaattaaaataaaagcttatttatttacataa 5243352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 8062021 - 8061951
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||| || | |||| ||||  |||||| |||||| ||||||||||||||||| |||||    
T  8062021 atgaagatacaattttcatttgtgagagcttataaattaaaataaaaatttatttatttacataacctatt 8061951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 12256680 - 12256738
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||| |||||||||||||||  |||||||| ||||||| |||||| |||||||||||    
T  12256680 atgaaggtacaattttcgttagtaagaacttatgaattaaaataaaaatttatttattt 12256738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 17814264 - 17814334
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||||||||  ||||||||   ||||| ||||||| |||||||||||||||| |||||    
T  17814264 atgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagctatt 17814334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 26435187 - 26435117
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||| |||||||||  ||||||||| ||||||| ||| |||| ||||||||| ||||| |||||    
T  26435187 atgaagatacatttttcgttactgagaacttatgaattaacatataagtctatttatttgcataaactatt 26435117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 26946223 - 26946165
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||| || |||||| |||||||||||||| ||||||| ||||||| ||||||||    
T  26946223 tttggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttt 26946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 28689970 - 28690067
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataa--acaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||| |||||| || ||||||| ||||||||||||||||||  | ||| ||||| ||| ||||||||||  | ||||| ||||| |||||    
T  28689970 tttggattggcttattttttagtttatgcagaacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttatgaa 28690067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 28690182 - 28690120
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| ||  ||||| |||||||| |||| |||||||||||||||| |||||||||    
T  28690182 ccgtttggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagctttta 28690120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 35275904 - 35275846
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| ||||  |||  |||||| ||||||||||||||||||||||||    
T  35275904 atacaattttcgttagtgagattttataaattaaaataaaagtttatttatttacataa 35275846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 35590099 - 35590157
Alignment:
Q  75 ttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||| || |||||| |||||||| |||||| |||||||||||||| |||||||||    
T  35590099 ttggattgacttattttttagcttatgtaaaacaacttatgcaaataaataagctttta 35590157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 1005342 - 1005403
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| | || || |||||||||||    
T  1005342 agcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaa 1005403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 1565284 - 1565344
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| |||||| |||||||| |||| ||||| |||||||||| |||||||||    
T  1565284 cgtttggattggcttatttttgagcttatgaaaaatagctt-tgcaaataaataagctttta 1565344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 3069866 - 3069809
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatt 222  Q
    |||||||||||||||||  ||| ||||||||| ||||||| ||||||| |||||||||    
T  3069866 atgaagatacaattttcactagtgagaacttatgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 22593416 - 22593355
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||| ||||| |||||||||  |||||| ||||||| |||||||||| |||||    
T  22593416 aagatacaatttttgttagtgagaacttataaattaacataaaagcttatttatttgcataa 22593355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 35897626 - 35897561
Alignment:
Q  170 gatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||| |||| || || |||  |||||| |||||||||||||||||||||||| |||||    
T  35897626 gatacaattttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatt 35897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 3116074 - 3116010
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||||||||  ||| ||||  |||||| ||||||| ||| ||||||||||||    
T  3116074 atgaagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataa 3116010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 16225472 - 16225536
Alignment:
Q  69 gtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| || |||||  |||||||||||||||| ||||| ||||||| ||| |||||    
T  16225472 gtccgtttggattgacttattttagagcttatgcaaaacagtttatgtaaataaataagttttta 16225536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 16888978 - 16888914
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||| |||| ||||| ||| || |||| ||||||| |||||||||| |||||    
T  16888978 atgaagatacaattttcattagtgagaatttatgacttaacataaaagcttatttatttgcataa 16888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 42591450 - 42591526
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||| |||||||||| || | ||||  |||||| ||||||  |||||||||||||||| |||||    
T  42591450 tagtttatgaagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagctatt 42591526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 10365345 - 10365286
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||| || ||||||||||||||| |||| ||||||||||||| || |||||||||    
T  10365345 tttgaattgacttatttttaagcttatgaaaaatagcttatgcaaatgaataagctttta 10365286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 10850174 - 10850115
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| ||||||||||||| || || |||||||||| ||||||||| ||| ||||||||||    
T  10850174 ttttgagcttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataag 10850115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 46689648 - 46689609
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  46689648 agcttatgcaaaacagtttatgcaaataaaaaagctttta 46689609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 4068293 - 4068231
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||||| || ||||| |||  |||||||||||||||| || ||||||    
T  4068293 ccgtttggattggcttattttttagtttatgaaaagtagcttatgcaaataaataaactttta 4068231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 5347228 - 5347298
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||||||||   ||||||||   ||||| ||||||| |||||||||||||||| |||||    
T  5347228 atgaaaatacaattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatt 5347298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 9572883 - 9572845
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  9572883 agcttatgcaaaacagcttttgcaaataaataagctttt 9572845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 22103183 - 22103253
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||||||||  ||||||||   ||||| ||||||| || ||||||||||||| |||||    
T  22103183 atgaaaatacaattttcgttagttagaacttatagattaaaataaaagcttctttatttacataagctatt 22103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 26988222 - 26988292
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||| |||||||  | |||||| ||||||| ||||||| | |||||||| ||||| |||||    
T  26988222 atgaagatacaattgtcgttagtaaaaacttatgaattaacataaaagctaatttatttgcataaactatt 26988292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 28690078 - 28690148
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||  |||| ||||| ||  ||||||| ||||||| |||||||||| ||||| |||||    
T  28690078 atgaagatacaatttttattagtgagaaattctgaattaacataaaagcttatttatttgcataagctatt 28690148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 28870381 - 28870319
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| | |||| |||||||| |||| | ||| |||||||||| |||||||||    
T  28870381 ccgtttggattggcttaatttttagcttatgaaaaataacttttgcaaataaataagctttta 28870319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 32497389 - 32497315
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| |||||    
T  32497389 tttggattagcttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataag 32497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 37329320 - 37329382
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| | || |||||| |||||||| |||| | |||||||||||||| |||||||||    
T  37329320 ccgtttggatcgacttatttttgagcttatgaaaaataacttatgcaaataaataagctttta 37329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 37712035 - 37712124
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    ||||||||||  | |||||| |||| ||| ||||||| |||||||||| || ||||||||| ||| ||||||||||| | ||||| |||||    
T  37712035 gtttggattgatttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgta-tattcataagcttgtcaaggtagtt 37712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 41196722 - 41196652
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||| |||| |||  ||||||| ||||| | |||||||||| ||||| |||||    
T  41196722 atgaagatacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgcataagctatt 41196652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 45267540 - 45267594
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttattt 219  Q
    ||||||||||||||||||||||  |||||||| |||| || ||||||| ||||||    
T  45267540 atgaagatacaattttcgttagtaagaacttatgaataaacataaaagcttattt 45267594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 1565470 - 1565405
Alignment:
Q  104 aaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||| ||||||||||||||||| | | ||||| ||||| | ||||| ||||| |||||    
T  1565470 aaacagcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatgaa 1565405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 18317075 - 18317132
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatt 222  Q
    ||||||||||||| |||||||  ||||||||| |||| || ||||| |||||||||||    
T  18317075 atgaagatacaatattcgttaatgagaacttatgaatcaacataaacgtttatttatt 18317132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 26435086 - 26435135
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    ||||||||| || ||||||||||||||| |||| || |||||||||||||    
T  26435086 tttggattgacttatttttaagcttatgaaaaatagtttatgcaaataaa 26435135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 35590315 - 35590246
Alignment:
Q  65 tatggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaa 134  Q
    ||||||||||||| |||| || |||||||||||||   |||| ||||||| |||||||| ||| ||||||    
T  35590315 tatggtccgtttgaattgacttatttttaagcttagaaaaaatagcttatccaaataaaaaagtttttaa 35590246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 36422993 - 36422920
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctattctt 238  Q
    ||||||||| || ||||||||| ||||| |||  || ||| |||||||||||||||||| |||||  |||||||    
T  36422993 atgaagataaaaatttcgttagtgagaagttataaaataatataaaagtttatttatttgcataagttattctt 36422920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 42591344 - 42591409
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| | | ||||| |||||||| ||||||||||| | ||| |||| |||||||||    
T  42591344 ggtccgtttggattagtttattttaaagcttatacaaaacagcttgtacaagtaaataagctttta 42591409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 46473057 - 46473121
Alignment:
Q  69 gtccgtttggattg-gctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| ||| ||||| | |||||||||||||||||| || ||||||| |||||||||    
T  46473057 gtccgtttggattgagcttattttga-gcttatgcaaaacagcttgtgtaaataaataagctttta 46473121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 272613 - 272677
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||| ||||||||| ||||| || ||||||  |||||| || ||||||||||||||| |||||    
T  272613 atgaagttacaattttagttagtgaaaacttataaattaatattaaagtttatttatttgcataa 272677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 1321510 - 1321566
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctt 130  Q
    ||||||||| || |||||| |||||| ||||||  ||||||||||||||| ||||||    
T  1321510 tttggattgacttatttttgagcttacgcaaaatggcttatgcaaataaataagctt 1321566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 15631978 - 15632042
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| |||||||||||||||| |||| | ||  |||||| ||||||  ||||||||||||||||    
T  15631978 atgaaaatacaattttcgttagtgagagcatataaattaaaataaaaacttatttatttacataa 15632042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 16708873 - 16708937
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| ||||||||||| ||||  ||| |||| ||||||| |||||| ||||||||||| |||||    
T  16708873 atgaatatacaattttcattagtaagatcttatgaattaacataaaaatttatttatttgcataa 16708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 20169416 - 20169380
Alignment:
Q  97 ttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  20169416 ttatgcaaaacagcttatgcaaataaataagttttta 20169380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 26435279 - 26435243
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  26435279 atttttgagcttatacaaaacagcttatgcaaataaa 26435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 26988324 - 26988264
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| || |||||| |||||||| |||| || |||||||||||||  ||||||||    
T  26988324 gtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaattagctttta 26988264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 37712243 - 37712183
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| || |||||| |||||| | |||| |||||||||||||||| || ||||||    
T  37712243 gtttggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaactttta 37712183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 37420081 - 37419955
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagata 173  Q
    |||||||||||| |||||| |||||||| |||| |  ||||||||||||| ||||||||| || | ||||||||   | ||||| ||||| |||||||||    
T  37420081 tttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgtta-attcataattttgtcaaggtagtttatgaagata 37419983  T
Q  174 caattttcgttagcgagaacttacgaat 201  Q
    ||||||| ||||||||||||||| ||||    
T  37419982 caattttggttagcgagaacttatgaat 37419955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 38215988 - 38216163
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaa----- 165  Q
    |||||||||||| || |||||| |||||||||||||||||||||||||||||| ||    ||| ||| ||||||||||| | ||||| ||||| |         
T  38215988 ccgtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttaggaaa 38216083  T
Q  166 ----------tgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
              ||||||||||||||||||||| ||||||||| || |||| ||||||| |||||||||| ||||| |||||    
T  38216084 aaatagcatatgaagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatt 38216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 887590 - 887528
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||| | |||||||||    
T  887590 ccgtttggattggctaattttttagcttttgaaaaacagcttatgcaaatagataagctttta 887528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 4090462 - 4090552
Alignment:
Q  79 attggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| || |||| | ||| ||||||||| | | ||||| |||| ||||||    
T  4090462 attggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaa 4090552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 27703574 - 27703501
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||||   |||| |||||||||||||||||||||||||||||| |||||||||  || |||||||||||    
T  27703574 gtttggattggct---ttttgagcttatgcaaaacagcttatgcaaataaataagcttttatatattattcataagc 27703501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 34913488 - 34913434
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  34913488 agcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataag 34913434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 4026900 - 4026988
Alignment:
Q  80 ttggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||| |||||| |||||||||||||| ||||||||||||||| ||||||||| ||| || |||||||| | ||||| ||||| |||||    
T  4026900 ttggcttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtatta-tcataagcttgtcaaggtagtttatgaa 4026988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 8832637 - 8832573
Alignment:
Q  69 gtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| || |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  8832637 gtccgtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagctttta 8832573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 2790195 - 2790140
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  2790195 ggtctgtttgggttggcttatttttgagcttatgcaaaacagcttatgcaaataaa 2790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 8441461 - 8441596
Alignment:
Q  94 agcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagatacaattttcgttagcgagaac 193  Q
    |||||||||||| ||||||||||||||||| | | ||||| ||| |||| |||||  | | ||  ||||| |||||| |||||||||| |||| |||||     
T  8441461 agcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaaggtacaattttctttagtgagaat 8441560  T
Q  194 ttacgaattaagataaaagtttatttatttacataa 229  Q
    ||| ||||||| || |||  |||||||||| |||||    
T  8441561 ttatgaattaaaattaaaacttatttatttgcataa 8441596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 8832534 - 8832601
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||| || |||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  8832534 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatt 8832601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 38471808 - 38471745
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||| |||||| ||||||||||||||| ||||||||| |||||||||||| | |||||||||||    
T  38471808 agtttatgaaggtacaattttcgttagtgagaacttatgaattaagataacaatttatttattt 38471745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 2757188 - 2757028
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagat 172  Q
    |||||||||| || |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| |||||  | | ||| ||||| ||||| |     
T  2757188 gtttggattgacttattttagagcttatataaaacagcttatgcaaataaataag-ttttatgtattatttataagtttttaaag-tagtttatgaaaaa 2757091  T
Q  173 acaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||| |||||||||| |||| ||||  || ||| ||||||  |||||||||||||||| |||||    
T  2757090 acagttttcgttagtgagagcttataaaataaaataaaaacttatttatttacataagctatt 2757028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 4026999 - 4027069
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||| ||||||||| ||||||| |||| || |||||||||| ||||| |||||    
T  4026999 atgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatt 4027069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 12442980 - 12442903
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||| ||| | |||| |||||||| ||||||||||||||| ||||| |||||||||||| | ||||||||||    
T  12442980 ccgtttggattagcttaattttgagcttatgaaaaacagcttatgcagataaataagcttttaagtta-attcataagc 12442903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 23956355 - 23956314
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctt 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  23956355 ttttaagcttatgcaaaacagcttatgcaaataaataagctt 23956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 446501 - 446565
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||| ||||  |||||| ||||||| ||| ||||||||||||    
T  446501 atgaagatacaattttcgttagtgagagcttataaattaaaataaaagcttacttatttacataa 446565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 887486 - 887550
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||| ||||| |||||||| ||||||| ||||||| |||| ||||| |||||    
T  887486 atgaagatacaattttcattagcaagaacttatgaattaacataaaagcttatctatttgcataa 887550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 5903714 - 5903654
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||| ||| |||| |||||||||||||||| |||||||||    
T  5903714 gtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagctttta 5903654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 5903791 - 5903731
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| |||| ||| |||| |||||||||||||||| |||||||||    
T  5903791 gtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagctttta 5903731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 7480909 - 7480841
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||| ||||  |||||||| ||||||| ||||||  |||||||||| |||||||||||    
T  7480909 gaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttgcataatctatt 7480841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 11776951 - 11777047
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||| || ||||| ||||  ||| ||||||||||||||| ||||| ||||||||| ||| |||| |||||| | | ||||||||| |||||    
T  11776951 gtttggattgacttattttaaagcgcatgtaaaacagcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaa 11777047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 12683725 - 12683649
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||| ||||||| ||||||||||| | ||||||||| ||||||||||||| ||| ||| | ||| |||||||||||    
T  12683725 gtttgtattggcttatttttaagctgacgcaaaacagattatgcaaataaataagttttaatgtattattcataagc 12683649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 21788531 - 21788595
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||| |||||||||||| |||| |||| ||||||| ||||||| |||||||||| |||||    
T  21788531 atgaagataaaattttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataa 21788595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 25836803 - 25836735
Alignment:
Q  101 gcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||||||||||||| | ||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  25836803 gcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaa 25836735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 30382279 - 30382211
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||| || | ||||  |||||| | ||||| ||||||||||||||||||||||    
T  30382279 gaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatt 30382211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 33321415 - 33321335
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||| ||||||||||||||| ||| |||||||||| ||||||||| ||  ||||||||||| | ||||| ||||| |||||    
T  33321415 ttttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaa 33321335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 33321522 - 33321426
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||| ||||| || |||||| ||||||||||||||| |||||||||||||  ||| ||||| ||| || |||||||| | ||||| ||||| |||||    
T  33321522 gtttcgattgacttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttatgaa 33321426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 36501425 - 36501485
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||||| ||||| || |||| |||||||||||||||| |||||||||    
T  36501425 gtttggattggcttatttttgagcttgtgaaaaatagcttatgcaaataaataagctttta 36501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 38471910 - 38471850
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||| ||| |||||  |||||||||||||||||||||||||||||| | |||||||    
T  38471910 gtttggattagcttattttcgagcttatgcaaaacagcttatgcaaataaatatgctttta 38471850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 4533503 - 4533441
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctt 130  Q
    ||||||||||||||  || |||||| |||||||| |||| |||||||||||||||| ||||||    
T  4533503 ggtccgtttggattaacttatttttgagcttatgaaaaatagcttatgcaaataaataagctt 4533441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 13097883 - 13097925
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatg 115  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  13097883 gtttggattggcttatttttgagcttatgcaaaacagcttatg 13097925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 29774819 - 29774877
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||| |||||||||||||||| ||||||||| |||||||  |||||| ||||||||||    
T  29774819 atgaaaatacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttattt 29774877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 33321324 - 33321254
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||| |||| |||  ||||||| ||||| |||||||||||| ||||| |||||    
T  33321324 atgaagatacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctatt 33321254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 37409626 - 37409680
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattc 143  Q
    |||| ||| ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  37409626 ttttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattc 37409680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 11072909 - 11073009
Alignment:
Q  69 gtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaat-attcataagcatatcaagttagttaatg 167  Q
    ||||||||||||||||| |||||| || |||||| ||||||||||| |||| ||| ||||||||  ||| | |||||||||| | ||||| ||||| |||    
T  11072909 gtccgtttggattggcttattttttag-ttatgctaaacagcttatccaaacaaataagcttttttgtattcattcataagcttgtcaaggtagtttatg 11073007  T
Q  168 aa 169  Q
    ||    
T  11073008 aa 11073009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 33321223 - 33321272
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  33321223 tttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaa 33321272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 38216200 - 38216135
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||| |||||||| |||||| |||||| | |||| |||||||||||||||| |||||||||    
T  38216200 ggtcggttttgattggcttattttttagcttacgaaaaatagcttatgcaaataaataagctttta 38216135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 40301317 - 40301394
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| |||||    
T  40301317 ccgtttggattagcttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttataag 40301394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 4027093 - 4027045
Alignment:
Q  81 tggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagct 129  Q
    ||||| ||||||||||||||| |||| |||||||||||||||| |||||    
T  4027093 tggcttatttttaagcttatgaaaaatagcttatgcaaataaataagct 4027045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 13056440 - 13056356
Alignment:
Q  79 attggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtt 163  Q
    ||||||| |||||| |||| ||||||||| | ||||||||||| | ||||||||| ||| | ||||||||| | ||||| |||||    
T  13056440 attggcttattttttagctcatgcaaaacggattatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtt 13056356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 21788448 - 21788500
Alignment:
Q  97 ttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||| |||||||||||||| |||||||||  || |||||||||||    
T  21788448 ttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagc 21788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 42064925 - 42064989
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||  |||||||||||  |||||||| ||||||| ||||||| |||||||||| |||||    
T  42064925 atgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatttgcataa 42064989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 44475526 - 44475474
Alignment:
Q  170 gatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatt 222  Q
    |||||||||||| |||| ||||||||||||||||| ||||||  |||||||||    
T  44475526 gatacaattttcattagtgagaacttacgaattaacataaaaacttatttatt 44475474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 32522063 - 32521988
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||||||||  ||| ||||  |||||| ||| ||  |||||||||||||||| |||||    
T  32522063 agttcatgaagatacaattttcgttagtaagagcttataaattaaaatataaacttatttatttacataagctatt 32521988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 755862 - 755785
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||||| |  ||||| ||||||||||||||| |||| ||||||||  ||||||||| ||| |||||| ||||    
T  755862 ccgtttggattggatt-tttttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagc 755785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 4004893 - 4004963
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||| ||||||||||||||| ||||||||| ||||||  ||||||| || ||||| | ||||| |||||    
T  4004893 atgaagctacaattttcgttagtgagaacttatgaattactataaaagcttttttatctgcataagctatt 4004963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 4090565 - 4090627
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||||| |||||||||| ||||||| | || |  |||||||||| |||||    
T  4090565 gaagatacaattttcgttaccgagaacttatgaattaacacaacaacttatttatttgcataa 4090627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 5903514 - 5903596
Alignment:
Q  87 atttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||| |||| |||||||||| ||||||||||||||||||| ||   ||| || |||||||| | ||||  |||||||||||    
T  5903514 atttttgagctaatgcaaaacaacttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaa 5903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 10574173 - 10574115
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||| |||||| ||||||| ||||  |||||| ||||||| ||||||||||    
T  10574173 atgaagatacaaatttcgtcagcgagagcttataaattaaaataaaagcttatttattt 10574115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 13056339 - 13056281
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||| |||||||||||| |||||||||| ||||||| || |||| |||| |||||    
T  13056339 atgaagatgcaattttcgttaacgagaacttatgaattaacattaaagcttatctattt 13056281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 15155889 - 15155951
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||| |||||||| |||||  ||||||||| ||||||||||||||  |||||||||| |||||    
T  15155889 gaaggtacaatttccgttaatgagaacttatgaattaagataaaaacttatttattttcataa 15155951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 22898369 - 22898299
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| ||||||||||||||||  | ||||||   ||||| ||||||| |||||||||||||||| |||||    
T  22898369 atgaaaatacaattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatt 22898299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 29774710 - 29774772
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||| ||| || |||||| |||||||||| |||| |||||||||||||| || ||||||    
T  29774710 ccgtttgggttgtcttattttttagcttatgcataacaacttatgcaaataaataaactttta 29774772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 42839333 - 42839263
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||| ||||||||||||| || ||||||  |||||| ||||||| ||||||| || ||||| |||||    
T  42839333 atgaagatgcaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatt 42839263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 446414 - 446479
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||| ||| |||||  |||||||  |||||| |||||||||||||| ||| |||||    
T  446414 ggtccgtttggattagcttattttatagcttatataaaacaacttatgcaaataaataagttttta 446479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 23956273 - 23956212
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||||  |||||||||  |||||| ||||||  |||||||||| |||||    
T  23956273 aagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgcataa 23956212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 27243633 - 27243580
Alignment:
Q  96 cttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||||||||||||| |  || ||||||||| ||| |||||||||||    
T  27243633 cttatgcaaaacagcttatgcatagtaataagcttttacgtattattcataagc 27243580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 35515598 - 35515449
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaagata 173  Q
    |||| ||||||| |||||  |||||||| ||||||| ||| | ||||||| | |  |||| ||| |||| |||||  | | ||  ||||| |||||| ||    
T  35515598 tttgaattggcttattttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttatgaaggta 35515499  T
Q  174 caattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
     ||||||| |||| ||||  ||| |||||||||||||| |||||||||||    
T  35515498 taattttcattagtgagagtttatgaattaagataaaaatttatttattt 35515449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 755621 - 755681
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||| | || || ||| |||||||| |||| |||||||||||||||| |||||||||    
T  755621 gtttggatcgacttatctttgagcttatgaaaaatagcttatgcaaataaagaagctttta 755681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 1768761 - 1768797
Alignment:
Q  97 ttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  1768761 ttatgcaaaacagcttatgcaaataaataagttttta 1768797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 2401634 - 2401570
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| |||||||||| |||||  ||||||||   ||||| |||||| |||||||||||||||||    
T  2401634 atgaaaatacaatttttgttagtcagaacttatagattaaaataaaaatttatttatttacataa 2401570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 27709763 - 27709727
Alignment:
Q  97 ttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||| |||||||||||||||||| |||||||||    
T  27709763 ttatgcaagacagcttatgcaaataaataagctttta 27709727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 27880997 - 27880945
Alignment:
Q  177 ttttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||  || |||||| |||||||||||||| ||||||||||| |||||    
T  27880997 ttttcgttaatgaaaacttatgaattaagataaaaatttatttatttgcataa 27880945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 13131392 - 13131472
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||||||| ||| |||||| |||||||||||||||  ||||||||||||| ||||||||| ||| ||||||||||    
T  13131392 ggtccgtttggatttgcttattttttagcttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataag 13131472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 25333713 - 25333643
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| || |||||| ||||||| ||||||| |||||||||||||||| |||||    
T  25333713 atgaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagctatt 25333643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 34286576 - 34286506
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  34286576 atgaagatacaattttcgttagggagaacttatgaattaatataaaagcttatttatttgcataacctatt 34286506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 32131408 - 32131467
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||| |||||||||    
T  32131408 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctttta 32131467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 9131140 - 9131070
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||||||   ||||||| ||||||| |||||||||||||||||| ||||| |||||    
T  9131140 atgaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatt 9131070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 16972368 - 16972298
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| || |||||| |||| || |||||||||||||||||| ||||| |||||    
T  16972368 atgaagatacaattttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctatt 16972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 35055496 - 35055565
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| |||| |||| ||||||| ||||||| |||||||||||||||| |||||    
T  35055496 atgaagatacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatt 35055565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 9131029 - 9130965
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||||||||   ||||||| ||||||| |||||||||||||||||| |||||    
T  9131029 atgaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataa 9130965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 12607153 - 12607223
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||| |||||| |||| ||||  |||||| ||||||| |||||||||||||||| |||||    
T  12607153 atgaagatacaatttccgttagtgagagcttataaattaaaataaaagcttatttatttacataagctatt 12607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 13131621 - 13131559
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| || ||||||||||||||| |||| ||| |||||||||||| |||||||||    
T  13131621 ccgtttggattgacttatttttaagcttatgaaaaatagcatatgcaaataaataagctttta 13131559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 19925631 - 19925701
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| |||| ||||| |||||| |||||   |||||||||||||||| |||||    
T  19925631 atgaagatacaattttcgttagtgagagcttacaaattaaaataaatacttatttatttacataagctatt 19925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 28879233 - 28879171
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| || |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  28879233 ccgtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagctttta 28879171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 32212923 - 32212985
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| ||||||  ||||||| |||| |||||||||||||||| |||||||||    
T  32212923 ccgtttggattggcttatttttttgcttatgaaaaatagcttatgcaaataaataagctttta 32212985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 32975761 - 32975831
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||| | ||||||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  32975761 atgaagatacaatttttgtttgtgagaacttatgaattaatataaaagcttatttatttgcataagctatt 32975831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 42102176 - 42102250
Alignment:
Q  161 gttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||||||  ||||  |||  |||||| ||||||| |||||||||||||||| |||||    
T  42102176 gttaatgaagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatt 42102250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 42363329 - 42363259
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||| ||||||||   |||||| ||||||| |||||||||||||||| |||||    
T  42363329 atgaagatacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataagctatt 42363259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 11988270 - 11988334
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||||| |||| ||||  |||||| |||||||  |||||||||||||||    
T  11988270 atgaagatacaattttcgttagtgagagcttataaattaaaataaaagcatatttatttacataa 11988334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 24866963 - 24866899
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||| |||||||||||||| ||||||||||  |||||||||||||  |||||||||| |||||    
T  24866963 atgaaggtacaattttcgttatcgagaacttataaattaagataaaaacttatttatttgcataa 24866899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 38338869 - 38338793
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||  ||||||||||| |||||||||  |||||| ||||||  |||||||||||||||| |||||    
T  38338869 tagtttatgaagatatgattttcgttagtgagaacttataaattaaaataaaaacttatttatttacataagctatt 38338793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 2019773 - 2019718
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    ||||||||||||||| || |||||  ||||||||||||||| ||||||||||||||    
T  2019773 ggtccgtttggattgacttattttagagcttatgcaaaacatcttatgcaaataaa 2019718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 19327850 - 19327909
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| ||||||||||||||| |||||||||||||| || |||||| ||| ||||||||||    
T  19327850 tttttagcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataag 19327909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 30973952 - 30974011
Alignment:
Q  69 gtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagc 128  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||| ||||||| ||||    
T  30973952 gtccgtttggattggcttattttagagcttatgcaaagcagcttatgtaaataaagaagc 30974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 37410930 - 37410855
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||||||||  ||||||||  |||||| ||| ||  |||||||||||||||| |||||    
T  37410930 agttcatgaagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatt 37410855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 25465859 - 25465789
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||| ||||  || |||||| ||||||| ||||||| |||||||||| ||||| |||||    
T  25465859 atgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatt 25465789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 32131514 - 32131584
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||  ||| ||||||||| ||||||| ||||||| |||| ||||| ||||| |||||    
T  32131514 atgaagatacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatt 32131584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 10213871 - 10213814
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctt 130  Q
    ||||||||||| | |||||| |||||||| |||| |||||||||||||||| ||||||    
T  10213871 gtttggattggattatttttgagcttatgaaaaatagcttatgcaaataaataagctt 10213814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 19925546 - 19925599
Alignment:
Q  95 gcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||| |||||||||||||||||||||| |||||||||| || |||| |||||    
T  19925546 gcttatacaaaacagcttatgcaaataaataagcttttaattattatttataag 19925599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 28879060 - 28879121
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  28879060 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 28879121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 32213106 - 32213045
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| | ||| ||||||| |||||    
T  32213106 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaa 32213045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 35453412 - 35453473
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||||||| ||||||||| ||| ||||||||||  ||||||| ||||| |||||    
T  35453412 agcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaa 35453473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 38338971 - 38338894
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||| ||| |||||  |||||||  ||||||||||||||||||||| ||| |||||| || |||| |||||    
T  38338971 ccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataag 38338894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 8752882 - 8752942
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacat 227  Q
    |||||||||| ||| ||| | ||||||||| ||||||| ||||||| ||||||||||||||    
T  8752882 gaagatacaaattttgtttgtgagaacttatgaattaacataaaagcttatttatttacat 8752942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 14942391 - 14942487
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||||||| |||||  |||||||| |||||| |||||| | ||||| ||||||||  ||| |||| |||||| | | ||||||||| |||||    
T  14942391 gtttggattggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaa 14942487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 16706026 - 16706070
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||||||||||||||||||||||||||||| | |||||||    
T  16706026 ttttgagcttatgcaaaacagcttatgcaaataaatacgctttta 16706070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 24350531 - 24350467
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||| ||||||||||||  |||||||| ||||||| ||||||  |||||||||| |||||    
T  24350531 atgaagatataattttcgttagtaagaacttatgaattaacataaaatcttatttatttgcataa 24350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 42363440 - 42363360
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||||||| ||| |||||  |||||||  |||| |||||||||||||||| ||| ||||| ||| |||| |||||    
T  42363440 ggtccgtttggattagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataag 42363360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 14709626 - 14709559
Alignment:
Q  102 caaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||| |||||||| |||| |||||||||||||  |||||||||| | ||||| ||||| |||||    
T  14709626 caaaacagtttatgcaactaaataagcttttaagtacaattcataagcttgtcaagctagtttatgaa 14709559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 16706203 - 16706144
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||| |||||||||||||| ||||||||||||||| | | ||||| ||| ||||||||||    
T  16706203 ttttgagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataag 16706144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 25671900 - 25671832
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||  |||||| || ||||||  |||||| ||||||| |||||||||||||||| |||||    
T  25671900 atgaagatacaatt--cgttagtgaaaacttataaattaacataaaagcttatttatttacataagctatt 25671832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 10298835 - 10298885
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaata 121  Q
    ||||||||||||||| |||||| |||||||| | || ||||||||||||||    
T  10298835 ccgtttggattggcttatttttgagcttatgaataatagcttatgcaaata 10298885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 16972475 - 16972401
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||  | |||||| |||||||||||||||  || |||||||||| |||||| || ||| ||||||||||    
T  16972475 tttggattgttttattttttagcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataag 16972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 19925510 - 19925452
Alignment:
Q  70 tccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagc 128  Q
    ||||||||||||| || |||||  |||||||||| ||||| ||||||||||||| ||||    
T  19925510 tccgtttggattgacttattttagagcttatgcataacagtttatgcaaataaataagc 19925452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 25671799 - 25671860
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| |||| |||| ||||| |||| |||||||| ||||||| |||||||||    
T  25671799 ccgtttggattggcttatttataag-ttatgaaaaatagcttatgtaaataaataagctttta 25671860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 32975865 - 32975803
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| ||||| ||  ||||| |||||||| |||| |||||||||||||||| |||||||||    
T  32975865 ccgtttagattgtcttgtttttgagcttatgaaaaatagcttatgcaaataaataagctttta 32975803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 24087121 - 24087166
Alignment:
Q  88 tttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||| ||||||||||||| | |||||||||||||| |||||||||    
T  24087121 tttttgagcttatgcaaaagaacttatgcaaataaagaagctttta 24087166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 29243152 - 29243107
Alignment:
Q  103 aaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||||||||||||| ||||||||| ||| |||| |||||    
T  29243152 aaaacagcttatgcaaataaataagcttttatgtattatttataag 29243107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 31079171 - 31079114
Alignment:
Q  172 tacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||| ||| || |||||| ||||||||||||||  |||||||||| |||||    
T  31079171 tacaattttcgatagtgaaaacttatgaattaagataaaaacttatttatttgcataa 31079114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 32975689 - 32975750
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||||||| |||||||||  || ||||||||||| | ||||| ||||| |||||    
T  32975689 agcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaa 32975750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 34286473 - 34286534
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||| |||| || |||||| |||||||| |||| || ||||||||||||| |||||||||    
T  34286473 cgtttgaattgacttatttttgagcttatgaaaaataggttatgcaaataaataagctttta 34286534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 36907766 - 36907717
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||||||||||| |||||  |||||||||||| ||| |||||||||||||    
T  36907766 tttggattggcttattttagagcttatgcaaagcagtttatgcaaataaa 36907717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 42102072 - 42102149
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||||  || |||||  |||||||  ||||||||||||||||||||| ||| ||||| ||| |||| |||||    
T  42102072 ccgtttggattaacttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataag 42102149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 42667076 - 42667141
Alignment:
Q  170 gatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||| |||||||  | ||||||  |||||| |||||||||||||||||||| ||| |||||    
T  42667076 gatacaattctcgttagtaaaaacttataaattaaaataaaagtttatttatttacgtaagctatt 42667141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 12607239 - 12607195
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||| |||||||| ||||||| |||||||||    
T  12607239 ttttaagcttatgaaaaatagcttatgtaaataaataagctttta 12607195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 13265489 - 13265549
Alignment:
Q  111 ttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaaga 171  Q
    ||||||||||||| ||||||||| ||| ||||||||||| | ||||  ||||| |||||||    
T  13265489 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaagtagttcatgaaga 13265549  T

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Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 16972266 - 16972326
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||| || | |||| ||||||| ||||| |||||||||||||||| || ||||||    
T  16972266 gtttggattgacttaattttgagcttattcaaaatagcttatgcaaataaataaactttta 16972326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 25465758 - 25465817
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||||  ||| |||| ||||| |||| |||||||||||||||| |||||||||    
T  25465758 gtttggattggcttctttataag-ttatgaaaaatagcttatgcaaataaataagctttta 25465817  T

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Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 32924315 - 32924271
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| ||||||||||||||||||||||| |||||| | |||||||    
T  32924315 ttttgagcttatgcaaaacagcttatgcgaataaatatgctttta 32924271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 35285895 - 35285971
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||| ||||||  ||| || ||||||  |||||||||||||||||||||| ||||||||  ||  |||||||||||    
T  35285895 gtttgaattggcgtattatttagcttacacaaaacagcttatgcaaataaataagcttttgtgtgttattcataagc 35285971  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 17752148 - 17752073
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||||||||  ||||||||  |||||| |||||||||||||||||||||||| |||||    
T  17752148 agtttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatt 17752073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 19053468 - 19053393
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| ||||||||||||||||||||||  ||||||||  |||||| |||||||||||||||||||||||| |||||    
T  19053468 agtttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatt 19053393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 40240589 - 40240519
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||| ||||| |||||    
T  40240589 atgaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagctatt 40240519  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 229
Target Start/End: Original strand, 25341265 - 25341408
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatatt---cataagcatatcaagttagttaatgaagatacaattttcgtta 185  Q
    |||| |||||||| |||||||| |||||||||||| ||||||| |  || ||||   ||||||| | | ||| ||||| ||||||||| |||||||||||    
T  25341265 ttttgagcttatgtaaaacagcatatgcaaataaataagctttcatttattattactcataagcttgttaaggtagtttatgaagataaaattttcgtta 25341364  T
Q  186 gcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    | || |||||  ||||||| ||||||  ||||||||||||||||    
T  25341365 gggaaaacttgtgaattaatataaaaacttatttatttacataa 25341408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 34707723 - 34707667
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  34707723 gaagatacaattttcgttagcgagaacttacgaattaacataaaaacttatttattt 34707667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 23555446 - 23555521
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattc 143  Q
    |||||||||||||||||| |||||| ||||||| | |||||| ||||||||||||| ||||||||| ||| |||||    
T  23555446 ggtccgtttggattggcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 53218158 - 53218063
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||||||| || |||||| ||||||||||||||| ||||||| |||||| ||| ||||| ||| ||||||||||| | ||||| ||||| |||||    
T  53218158 tttggattgacttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaa 53218063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 45331307 - 45331237
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||| |||| ||||| || ||||||| |||||||||||||||||| ||||| |||||    
T  45331307 atgaagatacaattttcgctagcaagaacatatgaattaacataaaagtttatttatttgcataagctatt 45331237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 10272088 - 10272165
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||| || |||||| ||||||||||||||| || ||||||||||| || |||||| ||| |||||||||||    
T  10272088 cgtttggattgacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataagc 10272165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 40581201 - 40581100
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatg 167  Q
    ||||| ||| ||||| || || ||| ||||||||||||||| |||||||||||||| ||||||||| ||| |||| |||||| | ||||| ||||| |||    
T  40581201 ggtccattttgattgacttatctttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatg 40581102  T
Q  168 aa 169  Q
    ||    
T  40581101 aa 40581100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 4974273 - 4974333
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagc 128  Q
    |||||||||||||||||| |||||  |||||||||||| ||||||||||||||||| ||||    
T  4974273 ggtccgtttggattggcttattttagagcttatgcaaagcagcttatgcaaataaataagc 4974333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 29830656 - 29830568
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctattcttttttcataagct 250  Q
    |||| |||||||||||||||||||||| |||||||||  |||||| ||||||  ||||||||||||| ||  |||  ||||||||||||||    
T  29830656 agtttatgaagatacaattttcgttagtgagaacttataaattaaaataaaaacttatttatttacacaagttat--ttttttcataagct 29830568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 22809313 - 22809216
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagc-ttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    ||||| |||| || |||||| || ||||||||||||||||||||||||||| |||| |||||  || ||||||||||| | ||||| ||||| |||||    
T  22809313 gtttgaattgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaa 22809216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 37778207 - 37778268
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttaca 226  Q
    |||||||||||||||| ||||| |||||||||  |||||| ||||||| |||||||||||||    
T  37778207 atgaagatacaatttttgttagtgagaacttataaattaaaataaaagcttatttatttaca 37778268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 10449051 - 10449115
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||| || |||||||||||| ||||||||| ||||||||||||||  |||||||||| |||||    
T  10449051 atgaaggtataattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataa 10449115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 29270328 - 29270404
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||| || |||||| ||||||||||||||| |||||   |||||| ||||||||| ||| |||||||||||    
T  29270328 gtttggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagc 29270404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 34707832 - 34707756
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||| || |||||| ||||||||||||||| |||| | ||||| | ||||||||| ||| |||||||||||    
T  34707832 gtttggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagc 34707756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 40581088 - 40581024
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||||||  |||||||||| |||||    
T  40581088 atgaagaaacaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataa 40581024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 2086811 - 2086736
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    |||||||||||||| |||||  ||||||||| |||||||||||| ||||||| || |||||| ||| |||| ||||    
T  2086811 cgtttggattggcttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataa 2086736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 3645371 - 3645446
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| |||||||||||||||||||||| |||| ||||  |||||| ||| ||  |||||||||||||||| |||||    
T  3645371 agttcatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagctatt 3645446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 20894571 - 20894646
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| |||||||||||||||||||||| |||| ||||  |||||| ||| ||  |||||||||||||||| |||||    
T  20894571 agttcatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataaactatt 20894646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 29614262 - 29614337
Alignment:
Q  160 agttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||| |||||||||||||||||||||| |||| ||||  |||||| ||| ||  |||||||||||||||| |||||    
T  29614262 agtttatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagctatt 29614337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 584985 - 585047
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| || |||||| |||||||| ||||||  ||||||||||||| |||||||||    
T  584985 ccgtttggattgacttatttttcagcttatgtaaaacacattatgcaaataaataagctttta 585047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 28741226 - 28741180
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaa 211  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  28741226 atgaaggtacaattttcgttagtgagaacttatgaattaagataaaa 28741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 50022075 - 50022017
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttt 131  Q
    ||||||||||||| |||||  || ||||||||||||| ||||||||||||| |||||||    
T  50022075 gtttggattggcttattttagagattatgcaaaacagtttatgcaaataaataagcttt 50022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 1516107 - 1516046
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||| |||| |||||||||  |||||| ||||||  ||||||||||||||||    
T  1516107 aagatacaattttcattagtgagaacttataaattaaaataaaaacttatttatttacataa 1516046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 20685744 - 20685797
Alignment:
Q  79 attggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| ||| ||||    
T  20685744 attggcttatttttgagcttatgcaaaacagcttacgcaaataaataagttttt 20685797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 21720978 - 21721027
Alignment:
Q  162 ttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaa 211  Q
    ||||||||||||||||||||||||| ||||||||| || |||| ||||||    
T  21720978 ttaatgaagatacaattttcgttagtgagaacttatgacttaacataaaa 21721027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 42956188 - 42956127
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||||||||||||||||| |||||||||  |||||| ||||||  |||||||||| |||||    
T  42956188 aagatacaattttcgttagtgagaacttataaattaacataaaaacttatttatttgcataa 42956127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 52895416 - 52895359
Alignment:
Q  166 tgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||| ||||||||||||||| ||||| ||| ||||||| ||||||| ||||||||||    
T  52895416 tgaagttacaattttcgttagtgagaatttatgaattaacataaaagcttatttattt 52895359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 53218051 - 53217998
Alignment:
Q  166 tgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttattt 219  Q
    ||||||||||||||||||||| |||||||||  |||||| ||||||| ||||||    
T  53218051 tgaagatacaattttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 53261865 - 53261816
Alignment:
Q  74 tttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||||||||||| |||||| |||||||| | |||||||||||||||||||    
T  53261865 tttggattggcttatttttgagcttatggacaacagcttatgcaaataaa 53261816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 10448741 - 10448817
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||| ||| |||||  ||||||||||||||| |||||||||||||| | || |||| ||| |||| ||||||    
T  10448741 gtttggattagcttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagc 10448817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 21296733 - 21296829
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||| || |||||| || ||||||||||||  ||||||||||||| ||| |||||  || |||||||| |  ||||||| ||||| |||||    
T  21296733 gtttggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaa 21296829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 24841396 - 24841328
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||||||||||||||||   |||| ||||  |||||| |||||| ||||||| |||||||||||||||    
T  24841396 gaagatacaattttcgtttttgagagcttataaattaaaataaaaatttatttgtttacataatctatt 24841328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 33946645 - 33946601
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||    
T  33946645 ttttgagcttatgcaaaatagcttatgcaaataaataagctttta 33946601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 46573364 - 46573424
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||| ||| |||||| |||||| | |||| |||||||||||||||| |||||||||    
T  46573364 gtttggattcgcttattttttagcttaggaaaaatagcttatgcaaataaataagctttta 46573424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 3845822 - 3845917
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatga 168  Q
    |||| |||||||| || ||| ||||||||||| |||| |||  |||||||| |||||||||  || ||||||||||| | ||||| ||||| ||||    
T  3845822 gtttagattggcttatatttgagcttatgcaacacagattacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatga 3845917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 20894465 - 20894544
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataa 147  Q
    |||||||||||||| ||| |||||  |||||||  ||||||||||||| ||||||| ||| ||||| ||| |||| ||||    
T  20894465 ggtccgtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataa 20894544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 48597879 - 48597820
Alignment:
Q  165 atgaagatacaattttcgttagcgagaactt-acgaattaagataaaagtttatttattt 223  Q
    ||||||||||||||||||| || |||||||| | ||||||| ||||||| ||||||||||    
T  48597879 atgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttattt 48597820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 52421159 - 52421124
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaact 194  Q
    |||||||||||||||||||||| |||||||||||||    
T  52421159 tagttaatgaagatacaatttttgttagcgagaact 52421124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 22809205 - 22809147
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    |||||||||||||||||||||   |||||||| ||||||| ||||||  ||||||||||    
T  22809205 atgaagatacaattttcgttaagaagaacttatgaattaacataaaaacttatttattt 22809147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 31787608 - 31787666
Alignment:
Q  177 ttttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||  ||||||||| ||||||| ||||| |||||||||||| ||||| |||||    
T  31787608 ttttcgttaaagagaacttatgaattaatataaacgtttatttatttgcataaactatt 31787666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 33946558 - 33946492
Alignment:
Q  169 agatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    ||||| |||||||||||  ||||||||| ||||||| ||||||| | |||||||| ||||| |||||    
T  33946558 agataaaattttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatt 33946492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 35583732 - 35583670
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacat 227  Q
    |||||||||||||||| ||||| ||  |||||  |||||| |||||| |||||||||||||||    
T  35583732 atgaagatacaattttagttagtgaagacttataaattaacataaaaatttatttatttacat 35583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 37243534 - 37243604
Alignment:
Q  159 tagttaatgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| |||||| |||| ||||| || | ||||||||| ||||||||||||||| ||| |||||| |||||    
T  37243534 tagtttatgaaggtacacttttcattggtgagaacttatgaattaagataaaagcttacttatttgcataa 37243604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 40240486 - 40240547
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||||||||||| || ||||| | ||||||| |||| |||||||||||||||| |||||||||    
T  40240486 ccgtttggattgacttattttga-gcttatgaaaaatagcttatgcaaataaataagctttta 40240547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 43079946 - 43079888
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 223  Q
    ||||||||||||||||||| |  ||||||||| |||||||  |||||| ||||||||||    
T  43079946 atgaagatacaattttcgtgattgagaacttatgaattaacttaaaagcttatttattt 43079888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 5129997 - 5129920
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||| |||| || ||||||||||||||||||||||  ||||||||| ||| ||| ||||  ||| ||| |||||||    
T  5129997 cgtttgaattgacttatttttaagcttatgcaaaacaaattatgcaaacaaataagattttgtgtattatccataagc 5129920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 40240661 - 40240620
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  40240661 agcttatgcaaataaagaagcttttatgtattattcataagc 40240620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 43079842 - 43079907
Alignment:
Q  71 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagt 136  Q
    |||||||||||| || ||||   |||||||| |||| ||||||| |||||||| ||||||||||||    
T  43079842 ccgtttggattgacttatttacgagcttatgaaaaatagcttattcaaataaataagcttttaagt 43079907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 43080018 - 43079957
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||||||||||||| ||||||||| ||  ||||||||||| | ||||| ||||| |||||    
T  43080018 agcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaa 43079957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 52421225 - 52421164
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 169  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  52421225 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 52421164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 53787761 - 53787700
Alignment:
Q  168 aagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||| |||||| ||||  ||||||||| ||||||||||||||  |||||||||| |||||    
T  53787761 aagatataatttttgttattgagaacttatgaattaagataaaaacttatttatttgcataa 53787700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 20174952 - 20174888
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| ||||||||||||||||  ||| |||| ||||||  ||||||| |||||||||| |||||    
T  20174952 atgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataa 20174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 29270524 - 29270480
Alignment:
Q  61 tatatatggtccgtttggattggctaatttttaagcttatgcaaa 105  Q
    |||||| |||| ||||||||||||| |||||| ||||||||||||    
T  29270524 tatatagggtctgtttggattggcttattttttagcttatgcaaa 29270480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 30321640 - 30321700
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    |||| |||||||| |||||| |||||| | |||| |||||||||||||||| |||| ||||    
T  30321640 gtttagattggcttattttttagcttaagaaaaatagcttatgcaaataaataagccttta 30321700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 30383730 - 30383790
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagc 128  Q
    |||| |||||||||| ||||||||  ||||||||||||| || |||||| |||||| ||||    
T  30383730 ggtcggtttggattgactaattttagagcttatgcaaaatagtttatgcgaataaagaagc 30383790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 36182578 - 36182642
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| ||| |||||| ||||||||||| |||  |||||| ||||||| |||||||||| |||||    
T  36182578 atgaatatataatttttgttagcgagaatttaaaaattaacataaaagcttatttatttgcataa 36182642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 36266210 - 36266286
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    |||||||||| ||| |||||  |||||||  ||||||| ||||||||||||| || |||||| ||| |||| |||||    
T  36266210 cgtttggattagcttattttagagcttatataaaacagtttatgcaaataaataaacttttatgtattatttataag 36266286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 38524162 - 38524226
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    ||||| || |||||||||||||  ||| |||| ||||||| ||||||| |||||||||| |||||    
T  38524162 atgaatatgcaattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataa 38524226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 47403774 - 47403710
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||||||| | |||  ||||  |||||| |||||| ||||||||||| |||||    
T  47403774 atgaagatacaattttcgtttgtgagggcttataaattaacataaaaatttatttatttgcataa 47403710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 24713 - 24788
Alignment:
Q  73 gtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||||||||| || ||| || ||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  24713 gtttggattggttattttata-gcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagc 24788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 24928 - 24863
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||||| || |||||| |||||||| |||  |||||||||||||||| ||| |||||    
T  24928 ggtccgtttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagttttta 24863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 38465 - 38395
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||| | |||||||||||||||| ||||  |||||| ||||||| |||||||||||||||| |||||    
T  38465 atgaagatgcgattttcgttagcgagagcttataaattaaaataaaagcttatttatttacataagctatt 38395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 48535 - 48598
Alignment:
Q  70 tccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||| ||||| || |||||| ||||||| ||||| |||||||||||||||| |||||||||    
T  48535 tccgttttgattgacttattttttagcttatacaaaatagcttatgcaaataaataagctttta 48598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 59232 - 59310
Alignment:
Q  70 tccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||| |||| ||| |||||  |||||||  ||||||||||||||||||||| ||| ||||||||| |||| |||||    
T  59232 tccgtttagattagctgattttagagcttatataaaacagcttatgcaaataaataagtttttaagtattatttataag 59310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 58772 - 58828
Alignment:
Q  67 tggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaa 123  Q
    |||| |||||||||||||| |||||||| |||||  |||| ||||||||||||||||    
T  58772 tggttcgtttggattggcttatttttaaacttataaaaaatagcttatgcaaataaa 58828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 242652 - 242582
Alignment:
Q  165 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||| |||||||||||||||| ||||  |||||| ||||||   ||||||||||||||| |||||    
T  242652 atgaagatacgattttcgttagcgagagcttataaattaaaataaaaacctatttatttacataagctatt 242582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 97115 - 97175
Alignment:
Q  72 cgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    ||||||||||| || |||||| ||||| |||||||||||| ||||||||||| | ||||||    
T  97115 cgtttggattgacttatttttgagcttttgcaaaacagctaatgcaaataaaaaggctttt 97175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 97321 - 97249
Alignment:
Q  77 ggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    ||||| ||| |||||| ||||| || |||| |||||||||||||||| ||||| ||| ||| |||||||||||    
T  97321 ggatttgcttattttttagcttgtgtaaaatagcttatgcaaataaataagctattatgtagtattcataagc 97249  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 178462 - 178542
Alignment:
Q  68 ggtccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 148  Q
    ||||||||||||||  || |||||| | ||||| | ||||| |||||||||||||| ||||||||| ||| |||| |||||    
T  178462 ggtccgtttggattaacttatttttgaacttatactaaacaacttatgcaaataaataagcttttatgtattatttataag 178542  T

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Target: scaffold0332 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 14752 - 14694
Alignment:
Q  171 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataa 229  Q
    |||||||||||||||| |||||||||  |||||| || |||| |||||||||| |||||    
T  14752 atacaattttcgttagtgagaacttataaattaacatgaaagcttatttatttgcataa 14694  T

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Target: scaffold0191 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 31311 - 31245
Alignment:
Q  68 ggtccgtttggatt-ggctaattttta-agcttatgcaaaacagcttatgcaaataaacaagctttt 132  Q
    |||||||||||||| |||| ||||||  |||||||| |||||| |||||||||||||| ||||||||    
T  31311 ggtccgtttggattaggcttattttttgagcttatgtaaaacaacttatgcaaataaataagctttt 31245  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 1218 - 1174
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagctttta 133  Q
    ||||||||||||| |||| | |||||||||||||| |||||||||    
T  1218 ttttaagcttatgaaaaataacttatgcaaataaataagctttta 1174  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 43919 - 43859
Alignment:
Q  89 ttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataagc 149  Q
    |||| ||||||| ||||||||| |||||||||||| ||| ||||| ||| |||||| ||||    
T  43919 ttttgagcttatacaaaacagcatatgcaaataaataagtttttatgtattattcaaaagc 43859  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 89337 - 89281
Alignment:
Q  108 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagtta 164  Q
    |||||||||||||||| ||| ||| | ||| ||||||||||| ||||||| ||||||    
T  89337 agcttatgcaaataaaaaagttttaatgtactattcataagcttatcaaggtagtta 89281  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 40684 - 40616
Alignment:
Q  167 gaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 235  Q
    |||||||||||||||||||  |||| ||||  |||||| ||||||  ||||||||||||| || |||||    
T  40684 gaagatacaattttcgttaaggagagcttataaattaaaataaaatcttatttatttacacaaactatt 40616  T

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