View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3543_high_3 (Length: 366)
Name: NF3543_high_3
Description: NF3543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3543_high_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 14178722 - 14179057
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178722 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
14178821 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
14178822 |
actatattgtatctcttgtgtgtgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
14178919 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14178920 |
ccctcggtattagagggttttccacgttaaatattggtgttcattttttttattgctaccgctgcgctgcaagatccagtctcttttggattttggaatt |
14179019 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14179020 |
ttaatttacacttgcgttaagctcgtcgagcccaacaa |
14179057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 14173968 - 14174304
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173968 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
14174067 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
14174068 |
actatattgtatctcttgtgtgtgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
14174165 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14174166 |
ccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcactaccgctgcgctgcaagatccagtctcttttggattttggaatt |
14174265 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174266 |
ttaatttacacttgcgttaagctcgtcgagcccaacaag |
14174304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 28611902 - 28611566
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611902 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
28611803 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28611802 |
actatattgtatctcttgtgtgtgtgag--agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
28611705 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28611704 |
ccctcggtattagagggtttttcacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaatt |
28611605 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611604 |
ttaatttacacttgcgttaagctcgtcgagcccaacaag |
28611566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 345
Target Start/End: Complemental strand, 28607140 - 28606805
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607140 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
28607041 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28607040 |
actatattgtatctcttgtgtgtgtgag--agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
28606943 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28606942 |
ccctcggtattagagggtttttcacgttaaatattggtgttaattttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaatt |
28606843 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606842 |
ttaatttacacttgcgttaagctcgtcgagcccaacaa |
28606805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 44161617 - 44161949
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
44161617 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtcttacgggaaac |
44161716 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
44161717 |
actatattgtatctcttgtgtgtgt--aagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
44161812 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161813 |
ccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccaatctcttttggattttggaatt |
44161912 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161913 |
ttaatttacacttgcgttaagctcgtcgagcccaaca |
44161949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 11104500 - 11104829
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| ||||||||||||||| |
|
|
| T |
11104500 |
cagagagtgtaggaaaaatacaccgggtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtgggtctcacgggaaac |
11104599 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |
|
|
| T |
11104600 |
actatattgtatctctt---tgtgtgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggagtttgtcccgtggt-tta |
11104695 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
||||| ||||||||| ||||| | |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11104696 |
ccctcgatattagaggattttctatgttaaatattggtgttcatttttatcgctacagctgcgctgcaagatccaatctcttttggattttggaatttta |
11104795 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11104796 |
atttacacttgcgttaagctcgtcgagcccaaca |
11104829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 48827000 - 48826701
Alignment:
| Q |
42 |
tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagaga |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgt--aaga |
48826903 |
T |
|
| Q |
142 |
gagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaa |
241 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||| |||||||||||||| |
|
|
| T |
48826902 |
gagcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgttaaa |
48826804 |
T |
|
| Q |
242 |
tattggtgttc-annnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccc |
340 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
48826803 |
tattggtgttctttttctatcgctaccgctgcgctgcaagatccaatctc--ttgaattttgaaattttaatttacaattgcgttaagctcgtcgatccc |
48826706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 317
Target Start/End: Complemental strand, 48708256 - 48708086
Alignment:
| Q |
147 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaatattg |
246 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| |||||| |||| || ||||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
| Q |
247 |
gtgttcannnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaattttaatttaca |
317 |
Q |
| |
|
|| || | || ||| ||| | || ||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
48708156 |
gtatttaattttatcgccaccactgcgttgtaagattcaatttcttttatattttggaattttaatttaca |
48708086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 232
Target Start/End: Complemental strand, 24726442 - 24726288
Alignment:
| Q |
73 |
ataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaat |
172 |
Q |
| |
|
|||||| |||| |||||| ||| |||||||||| ||||| |||| |||||||| ||| || ||||| ||||||||||||| | || ||||||||| |
|
|
| T |
24726442 |
ataataacatttgaataggagt-ggtctcacggaaaacaatatagtgtatctcgtgtcggta----agagaatggagagaatattattatgttctttaat |
24726348 |
T |
|
| Q |
173 |
atagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttc |
232 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||||| ||||||| ||||||| ||||||| |
|
|
| T |
24726347 |
ataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 12930707 - 12931042
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12930707 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaac |
12930806 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
12930807 |
actatattgtatctcttgtgtgtgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
12930904 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaattt |
308 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
12930905 |
ccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaattt |
12931004 |
T |
|
| Q |
309 |
taatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12931005 |
taatttacacttgcgttaagctcgtcgagcccaacaag |
12931042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 12935453 - 12935786
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| |
|
|
| T |
12935453 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagtaggtctcacgggaaac |
12935552 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
12935553 |
actatattgtatctcttgtgtgtgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
12935650 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaattt |
308 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
12935651 |
ccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtttcttttgaattttggaattt |
12935750 |
T |
|
| Q |
309 |
taatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935751 |
taatttacacttgcgttaagctcgtcgagcccaaca |
12935786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 26505063 - 26504945
Alignment:
| Q |
131 |
tgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttt |
230 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | ||||| ||| ||| ||||||| ||| | |
|
|
| T |
26505063 |
tgtgtgaaagagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtggt-tttgccttgttattagacggtat |
26504965 |
T |
|
| Q |
231 |
tccacgttaaatattggtgtt |
251 |
Q |
| |
|
| |||||||||||||| |||| |
|
|
| T |
26504964 |
t-cacgttaaatattgatgtt |
26504945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 15588948 - 15589060
Alignment:
| Q |
141 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaa |
240 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || | |||| |||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
241 |
atattggtgttca |
253 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15589048 |
atattgatgttca |
15589060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 26504895 - 26504850
Alignment:
| Q |
291 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcga |
336 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
26504895 |
ttttggattttgaaattttaatttacacttccattaaactcgtcga |
26504850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 34907170 - 34907503
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34907170 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaac |
34907269 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
34907270 |
actatattgtatctcttgtgtgtgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
34907367 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaattt |
308 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34907368 |
ccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaattt |
34907467 |
T |
|
| Q |
309 |
taatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907468 |
taatttacacttgcgttaagctcgtcgagcccaaca |
34907503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 11 - 344
Target Start/End: Complemental strand, 37040760 - 37040426
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37040760 |
cagagagtgtgggaaaaatacatcgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacggaaaac |
37040661 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040660 |
actatattgtatctcttgtgtgtgtgag--agagtggagaaaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttttt |
37040563 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
37040562 |
ccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtcttttttggattttggaatt |
37040463 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040462 |
ttaatttacacttgcgttaagctcgtcgagcccaaca |
37040426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 22 - 346
Target Start/End: Original strand, 15290273 - 15290596
Alignment:
| Q |
22 |
ggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgta |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
15290273 |
ggaaaaatacaccgggtgggtatcatctctataacttctaggtgctgaaata--atagcattcgaataggagtgggtctcacgg-aaacactatattgta |
15290369 |
T |
|
| Q |
122 |
tctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtatt |
221 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| || ||| ||||||||||||||||| | | |||| ||||| |
|
|
| T |
15290370 |
tctcttgtgtgtgtaagag--agtggagagaatattgtaatattcttaaatatagtggaaaatcttttggagtttgtcccgtggtttatacctcggtatt |
15290467 |
T |
|
| Q |
222 |
agagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgtgctgcaagatccaatctc-ttttggattttggaattttaatttaca |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
15290468 |
agagggttttccacgttaaatattggtgttcattttttttatcgctaaggctgcgctgcaagatccaatctctttttggattttgaaattttaatttaca |
15290567 |
T |
|
| Q |
318 |
cttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
15290568 |
attgcgttaagctcgtcgagcccaacaag |
15290596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 41 - 344
Target Start/End: Original strand, 12099060 - 12099361
Alignment:
| Q |
41 |
gtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagag |
140 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| ||||||| ||||||| ||||||| ||||||||| |||| |||| |
|
|
| T |
12099060 |
gtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcgtgtaagag |
12099159 |
T |
|
| Q |
141 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaa |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||| || ||||||||||||| ||||| || |
|
|
| T |
12099160 |
--agtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggtttttcacgtaaa |
12099257 |
T |
|
| Q |
241 |
atattggtgttcannnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccc |
340 |
Q |
| |
|
|||||| | |||| |||| || || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
12099258 |
atattgcttttcatttttatcgctatcggtgagctgcaagatcatatctcttttggattttggaattttaatttacactcgcgttaaactcgtcgagccc |
12099357 |
T |
|
| Q |
341 |
aaca |
344 |
Q |
| |
|
|||| |
|
|
| T |
12099358 |
aaca |
12099361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 12082055 - 12082227
Alignment:
| Q |
21 |
gggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgt |
120 |
Q |
| |
|
|||||||||| | ||||| ||||| |||||||||||||||||| ||||||| |||||| |||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
12082055 |
gggaaaaatatatcgggtaggtattatctctataacttctaggcgctataaaataataacatttgaataggagcgagtctcattagaaacactatattgt |
12082154 |
T |
|
| Q |
121 |
atctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagttt |
196 |
Q |
| |
|
||||||| | |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12082155 |
atctcttttccgtgt--aagagagtggagaaaatattgtaatattc-ttaatatagtggaatattttttggagttt |
12082227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 2757448 - 2757370
Alignment:
| Q |
107 |
aaacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttt |
187 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||||||||||| || |||||| || |||||||||||||||||| |
|
|
| T |
2757448 |
aaacactatattgtatctcttgagtgtg--aaagagagtggagagaatagtgcaatatttttaaatatagtggaatatttt |
2757370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 12084669 - 12084751
Alignment:
| Q |
262 |
gctaccgctgtgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||| || ||| ||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||||| |||||||||| |
|
|
| T |
12084669 |
gctaccgttgcgctacaagatccaatgtctattggattttgaaattttaatttaccctcgtgttaagctcgttgagcccaaca |
12084751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 2757273 - 2757211
Alignment:
| Q |
284 |
caatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| ||||||||| || | ||||||| |
|
|
| T |
2757273 |
caatttcttttgaattttggaattttaatttacacttgtaataagctcgttgaacacaacaag |
2757211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 344
Target Start/End: Complemental strand, 29107209 - 29106878
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtggg-tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaa |
109 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107209 |
cagagagtgtgggaaaaatacattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagtaggtctcacgggaaa |
29107110 |
T |
|
| Q |
110 |
cactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctt |
209 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
29107109 |
cactat-ttgtatctcttgtgtgtgtaagagag--tggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
29107013 |
T |
|
| Q |
210 |
tccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29107012 |
tccctcggtattagagggttttccacgttaaatattggtgttcatttttaacgctaccgctgcgctgcaagatccaatcttttttggattttggaatttt |
29106913 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
29106912 |
aatttacacttgcattaagctcctcgatcccaaca |
29106878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 345
Target Start/End: Complemental strand, 42911323 - 42910992
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
42911323 |
cagagagtgtggaaaaaatacactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagtaggtctcaagggaaac |
42911224 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtcttt |
210 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
42911223 |
actatattgtatcttttgtgtgtgtgag--agagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggagtttgtcccgtggttttt |
42911127 |
T |
|
| Q |
211 |
ccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||||| | | |||||| ||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
42911126 |
ccctcggtattagagggttttccatgttaaatattggtgttcatttttatcgttgccgctgcgctgcaagatctaatctcttttggattttaaaatttta |
42911027 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
42911026 |
atttccacttgcgttaagctcgtcgagcccaacaa |
42910992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 38994779 - 38994697
Alignment:
| Q |
264 |
taccgctgtgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
|||||||| |||||||||||||| | ||||| |||||||||||||||||||||| || ||||| ||||| ||||||||||| |
|
|
| T |
38994779 |
taccgctgcactgcaagatccaattttgtttgggttttggaattttaatttacactagcattaagatcgtcaagcccaacaag |
38994697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 38997320 - 38997230
Alignment:
| Q |
162 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaatattggtgttc |
252 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| || |||| || ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattgctgttc |
38997230 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 38997193 - 38997136
Alignment:
| Q |
289 |
tcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||| | |||| ||||||||| |
|
|
| T |
38997193 |
tcttttggattctggaattttaatttacacccgcattaagcccttcgaacccaacaag |
38997136 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 11 - 350
Target Start/End: Original strand, 8539214 - 8539554
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||| | |||||| ||| |||||||||| |||| |
|
|
| T |
8539214 |
cagagagtgtgggaaaaatacatcggatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtgggtctcacgg-aaac |
8539312 |
T |
|
| Q |
111 |
actata---ttgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtc |
207 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
8539313 |
actataatattgtatctcttgtgtgtgtaagag--agtggagataatattgtaatattcttaaatatagtggaatatctttcggagtttgtcccgtgatt |
8539410 |
T |
|
| Q |
208 |
tttccctcagtattagagggttttccacgttaaatattggtgttca-nnnnnnnngctaccgctgtgctgcaagatccaatctcttttggattttggaat |
306 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||||| | |||||||| |||||||||||||||||||||| || |||||||| |
|
|
| T |
8539411 |
tttccctcggtattagagggttttccacgttaaatattgatgttcattttttattgttaccgctgcgctgcaagatccaatctcttttagaatttggaat |
8539510 |
T |
|
| Q |
307 |
tttaatttacacttgcgttaagctcgtcgagcccaacaagatat |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8539511 |
tttaatttacacttgcgttaagctcgtcgagcccaacaatatat |
8539554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 51302192 - 51302306
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaac |
110 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||| ||| ||||||||||||||| |
|
|
| T |
51302192 |
cagagagtgtggataaaatacaccgggtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtctcacgggaaac |
51302291 |
T |
|
| Q |
111 |
actatattgtatctc |
125 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
51302292 |
actatattgtatctc |
51302306 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 51302937 - 51303021
Alignment:
| Q |
262 |
gctaccgctgtgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
346 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
51302937 |
gctaccgctgcgctgcaagatccaatctgttttggattttgaaattttaatttacacttgcattaagctcgtcgatcccaacaag |
51303021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 51302308 - 51302344
Alignment:
| Q |
217 |
gtattagagggttttccacgttaaatattggtgttca |
253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302308 |
gtattagagggttttccacgttaaatattggtgttca |
51302344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 162 - 344
Target Start/End: Complemental strand, 2100379 - 2100199
Alignment:
| Q |
162 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnn |
261 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| || |||| |||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgttcaattttatc |
2100283 |
T |
|
| Q |
262 |
gctaccgctgtgctgcaaga-tccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|| || |||||||||| | || |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2100282 |
attatcgttgtgctgcaaaattcaaatctcttatgaattttggaattttaatttacacttgtgttaagctcgtcgagcccaaca |
2100199 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 2100771 - 2100723
Alignment:
| Q |
119 |
gtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattcttt |
169 |
Q |
| |
|
||||||||||||| ||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
2100771 |
gtatctcttgtgtatgtaagagag--tggagagaatattgtaatattcttt |
2100723 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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