View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3545_high_19 (Length: 451)
Name: NF3545_high_19
Description: NF3545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3545_high_19 |
 |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 141; Significance: 9e-74; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 191 - 440
Target Start/End: Original strand, 53752245 - 53752511
Alignment:
| Q |
191 |
atgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttgacttttg |
289 |
Q |
| |
|
||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
53752245 |
atgtgtttcatccctgcaaatggggctcgtttgaattttcgtctctatacttactaatcctcccaaaccttccctgcatttactaatcatttgacttttg |
53752344 |
T |
 |
| Q |
290 |
gtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatgatgtggtgtaatctgact--------------atgactagccaaatt |
375 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
53752345 |
gtcctaattacatctgattacttatgtgtcacataattagtcacgtggcaatgatgtggcgtaatctgactggaaaaaaaaatggatgactaggcaaatt |
53752444 |
T |
 |
| Q |
376 |
acacacgaaatgaccattttacccttaatgaaactacaca--tgtgaaatgaccattctaccccttt |
440 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |
|
|
| T |
53752445 |
acacacgaaatgaccattttgcccttaatgaaactacacacgtgttaaatgaccattctgccccttt |
53752511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 185 - 348
Target Start/End: Complemental strand, 53753515 - 53753351
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctccc-aaaccttcctgcaattactaatcatttga |
283 |
Q |
| |
|
||||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
53753515 |
ttaaatatgtgtttcatccctataaatagtgctcgtttgaattttcgtccctatacttattaatcctcccaaaactttcctgcaattactaatcatttga |
53753416 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatgatgtgg |
348 |
Q |
| |
|
||||||||| |||||||||||| | |||| ||| ||| | |||| |||| |||| ||||||||| |
|
|
| T |
53753415 |
cttttggtcctaattacatctaaatgcttacgtggcacgtgattaatgacatggcaatgatgtgg |
53753351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 360
Target Start/End: Original strand, 13231278 - 13231418
Alignment:
| Q |
221 |
ttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttgacttttggtctcaattacatctaattacttatgtgtc |
319 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||| |||| |||||||| |||||| |||| ||||||| ||| |||| | |||||||||||| | |
|
|
| T |
13231278 |
ttgaattttagtccctgtacttactaatcctcccaaaatttccctgcaattattaatcacttgaaatttggtccaaatcacatttgattacttatgtggc |
13231377 |
T |
 |
| Q |
320 |
acataattagtgacgtggcgatgatgtggtgtaatctgact |
360 |
Q |
| |
|
|||| | |||||| ||||||||||||||| |||||||||| |
|
|
| T |
13231378 |
acatgactagtgatgtggcgatgatgtggcttaatctgact |
13231418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 36801526 - 36801613
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||| |||| |||||||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
36801526 |
ataaattaaagttgtaataaacattaagtacgaagttgagataaaggagtttgaccaaaaacttacggtggatacttaaataattaca |
36801613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 18735639 - 18735557
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtaca-aagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
18735639 |
taaagttgtaatcaacattaagtacttaagttgaaatgacagagtttgactaaaaagtaagggtggatacttaaataattaca |
18735557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 18669363 - 18669282
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtaca-aagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattac |
176 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
18669363 |
taaagttgtaatcaacattaagtacgcaagttgaaatgacggagtttgactaaaaagttagggtggatacttaaataattac |
18669282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 18708133 - 18708052
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtaca-aagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattac |
176 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||| || |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
18708133 |
taaagttgtaatcaacattaagtacgcaagttgaaatgacggagtttgactaaaaagttagggtggatatttaaataattac |
18708052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 18715379 - 18715298
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaa-agttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattac |
176 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
18715379 |
taaagttgtaatcaacattaagtacgcgagttgaaatgacggagtttgactaaaaagttagggtggatacttaaataattac |
18715298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 5734781 - 5734702
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaa |
169 |
Q |
| |
|
||||| |||||||||||||| ||||||||| |||||||||| || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
5734781 |
ataaattaaagttgtaataagtattaagtacgaagttgaaatgacggagtttgactaaaaagttagggtgtatacttaaa |
5734702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 7777277 - 7777198
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataatta |
175 |
Q |
| |
|
|||| ||||||||| |||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||||||||| |
|
|
| T |
7777277 |
taaaattgtaataagcattaagtacgaagttgaaatgacggagtttgactaaacagttaggatgtatacttaaataatta |
7777198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 35602538 - 35602467
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| |||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
35602538 |
ttaaatatgtgtccagtccctgcaaataggcctcggttgaattttagtccctgtacttactaatcctcccaa |
35602467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 9045752 - 9045833
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||| | | ||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
9045752 |
taaagttgtaataaacattaagcaagaagttgaaatggcgatgtttgactaaaaagctagggtggatagttaaataactaca |
9045833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 12691786 - 12691678
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacc-ttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || |||||||||| |||||| | ||||||||||| |||| || ||||||| || ||||||||||| |
|
|
| T |
12691786 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttga |
12691687 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
12691686 |
cttttggtc |
12691678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 3232612 - 3232518
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatca |
278 |
Q |
| |
|
|||||||||| | | || ||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| |||| |||||||| |||||| |
|
|
| T |
3232612 |
ttaaatatgtttatagtccctgcaaatagggctcgtttgaatttttgtcccagtacttgttaatccccccaaaatttccttgcaattattaatca |
3232518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 10128709 - 10128779
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctccca |
255 |
Q |
| |
|
|||||||||| | | || ||||||||||||| ||||||||||||| ||| | |||||||||||||||||| |
|
|
| T |
10128709 |
ttaaatatgtttatagtccctgcaaatagggttcgtttgaattttactccatgtacttactaatcctccca |
10128779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 10394318 - 10394241
Alignment:
| Q |
100 |
gttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| | |||||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
10394318 |
gttgtaataagcattaagtacgaagttgaaatgaaggagtttgactaaattgttaggatagatacttaaataattaca |
10394241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 12691444 - 12691534
Alignment:
| Q |
220 |
tttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttgacttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||||||||||| | ||||||||||| |||| | ||| | ||| || |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
12691444 |
tttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaatcatttgacttttggtcctaattacatctgatta |
12691534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 489374 - 489443
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatc |
249 |
Q |
| |
|
|||| ||||||| || |||||| |||||||||| | |||||||||||| |||||||| | ||||||||| |
|
|
| T |
489374 |
ttggcttaaataggtctttcgtccctgcaaatataggtcgtttgaatttccgtccctaaatttactaatc |
489443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 515166 - 515235
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatc |
249 |
Q |
| |
|
|||| ||||||| || |||||| |||||||||| | |||||||||||| |||||||| | ||||||||| |
|
|
| T |
515166 |
ttggcttaaataggtctttcgtccctgcaaatataggtcgtttgaatttccgtccctaaatttactaatc |
515235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 47980688 - 47980813
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
||||||| || |||||| |||||||||| | | ||||||||||||||||| | ||||| ||||| |||| | ||| ||||| || ||||||||||| |
|
|
| T |
47980688 |
ttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactgatccttccaatctatccctgcaaatattaatcatttga |
47980787 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
|||||| || |||||||||| |||| |
|
|
| T |
47980788 |
cttttgatcctaattacatctgatta |
47980813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 106; Significance: 7e-53; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 28533780 - 28533929
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttga |
283 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28533780 |
ttaaatatgtgtttcgtccctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttccctgcaattactaatcatttga |
28533879 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaattacttatgtgtcacataattagtgac |
333 |
Q |
| |
|
||||||||| |||||||||||| | |||| ||| ||| | ||||||||| |
|
|
| T |
28533880 |
cttttggtcctaattacatctaaatgcttacgtggcacgtgattagtgac |
28533929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 6056379 - 6056504
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa-accttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || |||||||||||||||||| | ||||| ||||| |||| | | ||||||| || ||||||||||| |
|
|
| T |
6056379 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatttga |
6056478 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||| |||||||||| |||| |
|
|
| T |
6056479 |
cttttggtcctaattacatctgatta |
6056504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 9246564 - 9246638
Alignment:
| Q |
103 |
gtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||||| |||||||||| |||||||||| | | ||||||| |||||| |||||||||||| ||||||||||||| |
|
|
| T |
9246564 |
gtaataagcattaagtacgaagttgaaatgatagagtttgattaaaaatttagggtggatatttaaataattaca |
9246638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 21852433 - 21852369
Alignment:
| Q |
112 |
attaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattac |
176 |
Q |
| |
|
||||||||| |||||||||| || ||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
21852433 |
attaagtacgaagttgaaatgacggagtttaactaaaaagttagggtggatacttaaataattac |
21852369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 45040291 - 45040378
Alignment:
| Q |
90 |
ataaactaaagttgtaataaa--cattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataatta |
175 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| |||||||||| || |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
45040291 |
ataaattaaagttgtaataaaaacattaagtaagaagttgaaatgacgaagtttgactaaaaggttaggacggatacttaaataatta |
45040378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 2953850 - 2953727
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatca |
278 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | ||||||| || |||||| |
|
|
| T |
2953850 |
ttggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca |
2953751 |
T |
 |
| Q |
279 |
tttgacttttggtctcaattacat |
302 |
Q |
| |
|
||||| |||||||| |||||||| |
|
|
| T |
2953750 |
tttgatttttggtcctaattacat |
2953727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 299
Target Start/End: Original strand, 5926524 - 5926637
Alignment:
| Q |
187 |
aaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa-accttcctgcaattactaatcatttgact |
285 |
Q |
| |
|
|||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | ||||||| | ||||||||||||| |
|
|
| T |
5926524 |
aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttgact |
5926623 |
T |
 |
| Q |
286 |
tttggtctcaatta |
299 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
5926624 |
tttggtcttaatta |
5926637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 25415225 - 25415100
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa-accttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||| | |||||| |||||||||| || ||||||||||||| ||| | ||||||||||| |||| | ||||||||| || ||| ||||||| |
|
|
| T |
25415225 |
ttaaatatatttttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatccttccaatatgttcctgcaaatattaaccatttga |
25415126 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||| |||||||||| |||| |
|
|
| T |
25415125 |
cttttggtcctaattacatctgatta |
25415100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 49002878 - 49002987
Alignment:
| Q |
184 |
tttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatcatttg |
282 |
Q |
| |
|
||||||||||| |||||| |||||||||| | || ||||||||||||||| | | ||||||||||| |||| | ||||||| || |||||||||| |
|
|
| T |
49002878 |
tttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttg |
49002977 |
T |
 |
| Q |
283 |
acttttggtc |
292 |
Q |
| |
|
|||||||||| |
|
|
| T |
49002978 |
acttttggtc |
49002987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 2953467 - 2953575
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||| ||||| | || |||||||||||||||||| | ||||||||||| ||| | ||||||| || ||||||||||| |
|
|
| T |
2953467 |
ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcatttga |
2953566 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
2953567 |
cttttggtc |
2953575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 25030669 - 25030629
Alignment:
| Q |
137 |
agtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
25030669 |
agtttgactaaaaagttaaggtggatacttaaataattaca |
25030629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 33347786 - 33347677
Alignment:
| Q |
196 |
tttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttgacttttggtctc |
294 |
Q |
| |
|
|||||| |||||||||| | || ||||||||||||||| | | ||||||||||| |||| | || ||||| || |||||||||||||||||||| |
|
|
| T |
33347786 |
tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcct |
33347687 |
T |
 |
| Q |
295 |
aattacatct |
304 |
Q |
| |
|
|||||||||| |
|
|
| T |
33347686 |
aattacatct |
33347677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 46364577 - 46364641
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatc |
249 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||| |
|
|
| T |
46364577 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc |
46364641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 343
Target Start/End: Complemental strand, 39527178 - 39527019
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||||||| || |||| |||||||| ||||||||||||||||||| |||||||||||||| | ||| ||||| |||||||||||||||||||| |
|
|
| T |
39527178 |
ttaaatatgtgtttagtccctgtaaatagggtccgtttgaattttcgtccctgtacttactaatccttcaaaaacttccctgcaattactaatcatttga |
39527079 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatga |
343 |
Q |
| |
|
|||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39527078 |
cttttgaccctaattacatctgattacttatgtgtcacataattagtgacatggcgatga |
39527019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 16649252 - 16649329
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataat |
173 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
16649252 |
taaagttgtaataaacattaagtacgaagttgaaataaccgagttttactaaaaagttagggtggatacttaaataat |
16649329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 17623613 - 17623690
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataat |
173 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
17623613 |
taaagttgtaataaacattaagtacgaagttgaaataaccgagttttactaaaaagttagggtggatacttaaataat |
17623690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 22493703 - 22493786
Alignment:
| Q |
94 |
actaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| | || ||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
22493703 |
actaaagttgtaataaacattaagtacgtagttgaattgacgaagtttgactaaaaagttagggttgatacttaaataattaca |
22493786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 20389065 - 20389152
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20389065 |
ataaattaaagttgtaataagtattaaatacaaagttgaaattatggggtttgactaaaaagttagggtggatacttaaataattaca |
20389152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 30781444 - 30781378
Alignment:
| Q |
111 |
cattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
30781444 |
cattaagtacaaagttgaaatgacgaagtttgactaaaaaattaaggtggatatttaaacaattaca |
30781378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 39525679 - 39525778
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||||||||||||||||| | |||||||||||||| |||| ||| ||||||||||||||||| |||| |
|
|
| T |
39525679 |
ttaaatatgtgtttaatccctgcaaataggatccgtttgaattttcgtccttgtacttactaatcctttcaaaacttccctgcaattactaatcacttga |
39525778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 3226071 - 3226180
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa-accttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||||| | || | ||||||||||| || |||||||||| ||| ||||||||||||||||| | || | || |||||||||||||||||||| |
|
|
| T |
3226071 |
ttaaatatgtgtgtggtccgtgcaaatagggttcatttgaatttttgtctctatacttactaatccttcaaatattgtcatgcaattactaatcatttga |
3226170 |
T |
 |
| Q |
284 |
cttttggtct |
293 |
Q |
| |
|
||||||||| |
|
|
| T |
3226171 |
gttttggtct |
3226180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 6961543 - 6961465
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
6961543 |
taaagttgtaataagca---agtacaaagttgaaatggcggagtttgactaaaaagttagggtgaatacttaaataattaca |
6961465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 47733023 - 47733094
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| ||| ||||||||| |||||| || |||||||||||||||| |
|
|
| T |
47733023 |
ttaaatatgtgtccagtccctgcaaataggcctcagttgaattttagtccctgtaattactaatcctcccaa |
47733094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 47739094 - 47739023
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| ||| ||||||||| |||||| || |||||||||||||||| |
|
|
| T |
47739094 |
ttaaatatgtgtccagtccctgcaaataggcctcagttgaattttagtccctgtatttactaatcctcccaa |
47739023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 47082038 - 47082094
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccct |
236 |
Q |
| |
|
|||||||||||| || |||||| |||||||||| | || ||||||||||||||||| |
|
|
| T |
47082038 |
ttggtttaaataagtctttcgtccctgcaaatatagttcatttgaattttcgtccct |
47082094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 17)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 348
Target Start/End: Original strand, 43073566 - 43073730
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttga |
283 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||| |||||||||||||||||| | | |
|
|
| T |
43073566 |
ttaaatatgtgtttcgtccctgcaaatagggctcgtttgaatttttgtccctacacttaccaatcctcctaaaccttccctgcaattactaatcatatca |
43073665 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatgatgtgg |
348 |
Q |
| |
|
|||||| || |||||||||||| | |||| ||| ||| | |||| |||| || | ||||||||| |
|
|
| T |
43073666 |
cttttgatcctaattacatctaaatgcttacgtggcacgtgattaatgacttgacaatgatgtgg |
43073730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 43074567 - 43074486
Alignment:
| Q |
361 |
atgactagccaaattacacacgaaatgaccattttacccttaatgaaacta--cacatgtgaaatgaccattctaccccttt |
440 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
43074567 |
atgactagccaaattacacacgaaatgaccattttgcccttaatgaaactacacacatgtgaaacgaccattctaccccttt |
43074486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 43074802 - 43074736
Alignment:
| Q |
14 |
aaaaattgatttcgagtgagttgattctttaaaattgattctgactgaaagcaagttaaatcagtgg |
80 |
Q |
| |
|
||||||||||| | | |||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43074802 |
aaaaattgattcccactgagttgattctttaaaattgattctgactgaaaacaagttaaatcagtgg |
43074736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 43074642 - 43074595
Alignment:
| Q |
184 |
tttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcg |
231 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
43074642 |
tttaaatatgtgtttcgtccctgcaaatagggctcgtttgaattttcg |
43074595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 8995469 - 8995388
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||||||||||||||||||| || |||||||||| | |||||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
8995469 |
taaagttgtaataaacattaaacacgaagttgaaatgatggagtttgactaaaaacttatggttgatacttaaataattaca |
8995388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 36109264 - 36109191
Alignment:
| Q |
104 |
taataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||| |||||| ||| |||||||||| | |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
36109264 |
taataagcattaattacgaagttgaaatgatggagtttgactaaaaagttagggtggatacttaaataattaca |
36109191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 25382504 - 25382588
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaa--agtttgactaaaaaattagggtggatacttaaataa |
172 |
Q |
| |
|
||||| |||||||||||||||||| |||||| |||||||||| | || |||||||| |||| |||||||| |||||||||||| |
|
|
| T |
25382504 |
ataaattaaagttgtaataaacatcaagtacgaagttgaaatgataaggagtttgacaaaaatgttagggtgaatacttaaataa |
25382588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 36574855 - 36574984
Alignment:
| Q |
220 |
tttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttgacttttggtctcaattacatctaattacttatgtgt |
318 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||||||| ||| ||||||| || ||||||||||| |||||||| || |||| ||||||| | ||| |
|
|
| T |
36574855 |
tttgaaatttcatccctgaacttactaatcctcccaaatcttccctgcaaatattaatcatttgagttttggtcctaaacacatttaattaccgacgtgg |
36574954 |
T |
 |
| Q |
319 |
cacataattagtgacgtggcgatgatgtgg |
348 |
Q |
| |
|
||||| |||||||| |||| ||||| |||| |
|
|
| T |
36574955 |
cacatgattagtgaggtggtgatgacgtgg |
36574984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 41767616 - 41767687
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| ||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
41767616 |
ttaaatatgtgtccagtccctgcaaataggcctcagttgaattttagtccctgtacttactaatcctcccaa |
41767687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 41773711 - 41773640
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| ||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
41773711 |
ttaaatatgtgtccagtccctgcaaataggcctcagttgaattttagtccctgtacttactaatcctcccaa |
41773640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 547805 - 547691
Alignment:
| Q |
196 |
tttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttc-ctgcaattactaatcatttgacttttggtctc |
294 |
Q |
| |
|
|||||| |||||||||| | || |||||||||||||||||| | ||||||||||| |||| | | || ||| || |||||||||||||||||||| |
|
|
| T |
547805 |
tttcgtccctgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatctgccactacaaatattaatcatttgacttttggtcct |
547706 |
T |
 |
| Q |
295 |
aattacatctaatta |
309 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
547705 |
aattacatctgatta |
547691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 11636246 - 11636165
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||| ||| ||||| ||| || ||||||| || |||||| |||||||| ||||| || ||||||||||||||||| |
|
|
| T |
11636246 |
taaagttgtagtaagcattatatacgaatttgaaatgacgaagtttaactaaaaagttaggttgtatacttaaataattaca |
11636165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 17836927 - 17836853
Alignment:
| Q |
104 |
taataaacattaagtacaaagttgaaataacaaagtttgactaaaaaa-ttagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||| |||||| ||| ||||||||||||| |||||| | |||| | |||| ||||||||||||||||||||| |
|
|
| T |
17836927 |
taataagcattaattacgaagttgaaataacggagtttggcaaaaacagttagagtggatacttaaataattaca |
17836853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 27856823 - 27856872
Alignment:
| Q |
262 |
cctgcaattactaatcatttgacttttggtctcaattacatctaattact |
311 |
Q |
| |
|
||||||| || ||||||||||||||||||||| |||||||| | |||||| |
|
|
| T |
27856823 |
cctgcaaatattaatcatttgacttttggtcttaattacatttgattact |
27856872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 32017642 - 32017695
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaa |
149 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
32017642 |
taaaattgtaataagcattaagtacagagttgaaatgacggagtttgactaaaa |
32017695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 7396 - 7504
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa-accttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||| ||||| | |||||||| || |||| | | ||| ||| || ||||||||||| |
|
|
| T |
7396 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcttccctgaagttactaattcttccaacatgtccctacaaatattaatcatttga |
7495 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
7496 |
cttttggtc |
7504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 9461450 - 9461494
Alignment:
| Q |
15 |
aaaattgatttcgagtgagttgattctttaaaattgattctgact |
59 |
Q |
| |
|
||||||||||| |||| | |||||| ||||||||||||||||||| |
|
|
| T |
9461450 |
aaaattgattttgagttaattgattatttaaaattgattctgact |
9461494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 34661254 - 34661173
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
34661254 |
taaagttgtaataaacattaagtacgaagttgaaatgacagagtttgactaaaaagtttaggtggatacttaaataattaca |
34661173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 292
Target Start/End: Original strand, 20974933 - 20975045
Alignment:
| Q |
181 |
tggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctccc-aaaccttcctgcaattactaatcat |
279 |
Q |
| |
|
|||||||||||||| | | || |||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
20974933 |
tggtttaaatatgtctatagtccctgcaaatagggctcagttgaattttcgtccatgtacttactaatcctcccttttttttcctgcaattattaatcat |
20975032 |
T |
 |
| Q |
280 |
ttgacttttggtc |
292 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
20975033 |
ttgagttttggtc |
20975045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 18658562 - 18658483
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaa |
169 |
Q |
| |
|
||||| |||||||||||||| ||||||||| |||||||||| || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
18658562 |
ataaattaaagttgtaataagtattaagtacgaagttgaaatgacggagtttgactaaaaagttagggtgtatacttaaa |
18658483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 328
Target Start/End: Original strand, 7463764 - 7463886
Alignment:
| Q |
207 |
caaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacc-ttcctgcaattactaatcatttgacttttggtctcaattacatcta |
305 |
Q |
| |
|
|||||||| ||| ||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||| |||||||| |||| ||| | |
|
|
| T |
7463764 |
caaataggactcacttgaattttcgtccccatacttactaatcctcccaaaaaatttatgcaattattaatcatttgagttttggtcataatttcatttg |
7463863 |
T |
 |
| Q |
306 |
attacttatgtgtcacataatta |
328 |
Q |
| |
|
||||||||| || ||||| |||| |
|
|
| T |
7463864 |
attacttatatgacacatgatta |
7463886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 7481876 - 7481988
Alignment:
| Q |
221 |
ttgaattttcgtccctatacttactaatcctccc-aaaccttcctgcaattactaatcatttgacttttggtctcaattacatctaattacttatgtgtc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||| | |||||||||| |||||||||| |||||||| ||| ||| | ||||||||| || | |
|
|
| T |
7481876 |
ttgaattttcgtccctatacttactaattctcccgaaatttccctgcaattattaatcatttgggttttggtcataatctcatttgattacttatatggc |
7481975 |
T |
 |
| Q |
320 |
acataattagtga |
332 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
7481976 |
acatgattagtga |
7481988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 20961039 - 20961091
Alignment:
| Q |
203 |
cctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctccca |
255 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20961039 |
cctgcaaatagggctcagttgaattttcgcccctatacttactaatcctccca |
20961091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 1741390 - 1741498
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | || ||||| || ||||||||||| |
|
|
| T |
1741390 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatttga |
1741489 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
1741490 |
cttttggtc |
1741498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 7483041 - 7482956
Alignment:
| Q |
263 |
ctgcaattactaatcatttgacttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatgatgtgg |
348 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||| || | ||| |||||||| |||||||||| ||| |||||||||| |||| |
|
|
| T |
7483041 |
ctgcaattactaatcatttgagttttggtcctaatctaatttgattgcttatgtggcacataattaatgaggtggcgatgacgtgg |
7482956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 10749321 - 10749446
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatcatttga |
283 |
Q |
| |
|
||||||| || |||||| |||| ||||| | || ||||||||||||||||| | ||||||||||| | || | | ||||||| || ||||||||||| |
|
|
| T |
10749321 |
ttaaataggtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttctaatctatccctgcaaatattaatcatttga |
10749420 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||| |||||||||| |||| |
|
|
| T |
10749421 |
cttttggtcctaattacatctgatta |
10749446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 10997880 - 10998002
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcctgcaattactaatcatttgac |
284 |
Q |
| |
|
|||||||||| ||| || |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | |||| || || |||||||||||| |
|
|
| T |
10997880 |
ttaaatatgtattttgttcctgcaaatacaggtcatttgaattttcgtccctgaagttactaatccttccaa--ttccctgtaaatattaatcatttgac |
10997977 |
T |
 |
| Q |
285 |
ttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||| || |||||||||| |||| |
|
|
| T |
10997978 |
ttttgatcctaattacatctgatta |
10998002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 11313038 - 11312991
Alignment:
| Q |
262 |
cctgcaattactaatcatttgacttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
11313038 |
cctgcaaatactaatcatttgacttttggtcctaattacatctgatta |
11312991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 10427199 - 10427253
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaa |
150 |
Q |
| |
|
|||||||||||||| ||||| ||| |||||||||| ||| |||||||||||||| |
|
|
| T |
10427199 |
taaagttgtaataagtattaattacgaagttgaaatgacatagtttgactaaaaa |
10427253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 348
Target Start/End: Complemental strand, 14244089 - 14243925
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaat-cctcccaaaccttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||||| | | ||||||||||||||||||||||||||| |||| | |||||| || | ||||| || | ||||||| |||||||||||||| |
|
|
| T |
14244089 |
ttaaatatgtgtatagctcctgcaaatagggctcgtttgaatttttgtccatgtacttattattccctccacaatttccctgcaaatactaatcatttga |
14243990 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatgatgtgg |
348 |
Q |
| |
|
|||| ||| ||| ||| | |||||||||||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
14243989 |
gttttagtcctaatctcatttgattacttatgtggcacatgattagtgacgtagcgatgatgtgg |
14243925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 203 - 360
Target Start/End: Complemental strand, 34405058 - 34404908
Alignment:
| Q |
203 |
cctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttgacttttggtctcaattaca |
301 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| | |||||||||||||||||||| || ||||||| | |||||||||||| |||||||| ||| | |
|
|
| T |
34405058 |
cctgcaaatagggctcaattgaattttagtccatgtacttactaatcctcccaaaatttccctgcaaattctaatcatttgagttttggtc-caa----a |
34404964 |
T |
 |
| Q |
302 |
tctaattacttatgtgtcacataattagtgacgtggcgatgatgtggtgtaatctgact |
360 |
Q |
| |
|
||| || ||||||| |||||||| ||||| |||||||||| |||| |||||||||| |
|
|
| T |
34404963 |
tctcat---ttatgtgacacataataagtgatgtggcgatgacgtggcataatctgact |
34404908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 29141586 - 29141667
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||| ||||||||||||||| || |||||||||| | |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
29141586 |
taaagtcgtaataaacattaagcacgaagttgaaatgatggagtttgactaaaaagatagggtggatatttaaataattaca |
29141667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 32519158 - 32519283
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa-accttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | |||||||| || ||||||||||| |
|
|
| T |
32519158 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatttga |
32519257 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
|||||||| |||||||||| |||| |
|
|
| T |
32519258 |
cttttggttctaattacatctgatta |
32519283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 15075257 - 15075149
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| | | || || |||||||||| | ||||||||||| ||| || |||||||||||||| ||||| |||| |||||||||||||||||| | |
|
|
| T |
15075257 |
ttaaatatgtctatagtcccagcaaatagggtttgtttgaattttagtctctgtacttactaatccttccaaaatttccatgcaattactaatcatttaa |
15075158 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
|||||||| |
|
|
| T |
15075157 |
tttttggtc |
15075149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 43236542 - 43236666
Alignment:
| Q |
220 |
tttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttgacttttggtctcaattacatctaattacttatgtgt |
318 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||||||||||| ||||||| || ||||||||||| |||||||| || |||| ||||||| | ||| |
|
|
| T |
43236542 |
tttgaaatttcatccctgaacttactaatcctcccaaaccttccctgcaaatattaatcatttgagttttggtcctaaacacatttaattaccgacgtgg |
43236641 |
T |
 |
| Q |
319 |
cacataattagtgacgtggcgatga |
343 |
Q |
| |
|
||||| |||||||| |||| ||||| |
|
|
| T |
43236642 |
cacatgattagtgaggtggtgatga |
43236666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 29035110 - 29035189
Alignment:
| Q |
97 |
aaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattac |
176 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| || |||||||||| ||| ||| |||| ||||||| | |||||| |
|
|
| T |
29035110 |
aaagttgtaataaacattaagtacgaagttgaaatgacggagtttgactacaaagttaaggtgaatacttataaaattac |
29035189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 31643245 - 31643323
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataatt |
174 |
Q |
| |
|
|||||||||||||| |||||| ||| |||||||| | || |||| |||| |||||||||| ||||||||||||||||| |
|
|
| T |
31643245 |
taaagttgtaataagcattaaatacgaagttgaactgacggagttcgactgaaaaattaggatggatacttaaataatt |
31643323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 13646083 - 13646154
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| ||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
13646083 |
ttaaatatgtgtccagtccctgcaaataggcctcagttgaattttagtccctgtacttactaatcctcccaa |
13646154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 13652190 - 13652119
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaa |
256 |
Q |
| |
|
|||||||||||| || |||||||||||| ||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
13652190 |
ttaaatatgtgtccagtccctgcaaataggcctcagttgaattttagtccctgtacttactaatcctcccaa |
13652119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 20911510 - 20911403
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcctgcaattactaatcatttgac |
284 |
Q |
| |
|
|||||||||| |||||| |||| ||||| | || |||||||||| |||||| | ||||||||| | |||| | |||||||| || |||||||||||| |
|
|
| T |
20911510 |
ttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatcattccaatctgtcctgcaaatattaatcatttgac |
20911411 |
T |
 |
| Q |
285 |
ttttggtc |
292 |
Q |
| |
|
|||||||| |
|
|
| T |
20911410 |
ttttggtc |
20911403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 7981104 - 7981214
Alignment:
| Q |
239 |
acttactaatcctcccaaacctt-cctgcaattactaatcatttgacttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtgg |
337 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || |||||| |||| |||||||| || |||| ||||||| | ||| ||||| |||||||| |||| |
|
|
| T |
7981104 |
acttactaatcctcccaaaccttccctgcaaatattaatcacttgagttttggtcctaaacacatttaattaccgacgtggcacatgattagtgaggtgg |
7981203 |
T |
 |
| Q |
338 |
cgatgatgtgg |
348 |
Q |
| |
|
||||| |||| |
|
|
| T |
7981204 |
tgatgacgtgg |
7981214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 1150318 - 1150210
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| ||| | ||||||| || ||||||||||| |
|
|
| T |
1150318 |
ttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatcatttga |
1150219 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
1150218 |
cttttggtc |
1150210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 34404871 - 34404812
Alignment:
| Q |
383 |
aaatgaccattttacccttaatgaaactacacatgtg--aaatgaccattctaccccttt |
440 |
Q |
| |
|
||||||||||| | |||||||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
34404871 |
aaatgaccattctgcccttaattaaactagacatgtgcaaaatgaccattctaccccttt |
34404812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 292
Target Start/End: Original strand, 19606918 - 19607028
Alignment:
| Q |
183 |
gtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttc-ctgcaattactaatcattt |
281 |
Q |
| |
|
|||||||||||| |||||| |||| ||||| || ||||||||||||||||| | ||||||||||| |||| | || ||||| || ||||||||| |
|
|
| T |
19606918 |
gtttaaatatgtctttcgtccctgtaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgtcgttgcaaatattaatcattt |
19607017 |
T |
 |
| Q |
282 |
gacttttggtc |
292 |
Q |
| |
|
||||||||||| |
|
|
| T |
19607018 |
gacttttggtc |
19607028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 43237763 - 43237709
Alignment:
| Q |
239 |
acttactaatcctcccaaacctt-cctgcaattactaatcatttgacttttggtc |
292 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || |||||| |||| |||||||| |
|
|
| T |
43237763 |
acttactaatcctcccaaaccttccctgcaaatattaatcacttgagttttggtc |
43237709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 15073995 - 15074043
Alignment:
| Q |
201 |
tacctgcaaatagggctcgtttgaattttcgtccctatacttactaatc |
249 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||| ||||||||||| |
|
|
| T |
15073995 |
tacctgcagatagagctcgtttgaattttagtccctgcacttactaatc |
15074043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 20070844 - 20070931
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20070844 |
ataaattaaagttgtaataagtattaaacacaaagttgaaataatggagtttgactaaaaagttagggtggatacttaaataattaca |
20070931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 37042209 - 37042288
Alignment:
| Q |
98 |
aagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||||| |||| | ||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| |
|
|
| T |
37042209 |
aagttgtaataagcatttaatacgaagttgaaataacaaagtttgactaaaaagttaggatggatgcttaaatagttaca |
37042288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 19576838 - 19576919
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||||||||||| ||| |||||| |||||||||| ||| | |||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
19576838 |
taaagttgtaatacgcataaagtacgaagttgaaatgacagaatttgactaaaaagtttgggtgaatacttaaataattaca |
19576919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 32052605 - 32052480
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | ||||||| || ||||||||||| |
|
|
| T |
32052605 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga |
32052506 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||| |||||||||| |||| |
|
|
| T |
32052505 |
cttttggtcctaattacatctgatta |
32052480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 25253467 - 25253359
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | || ||||| |||||||||||||| |
|
|
| T |
25253467 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttga |
25253368 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
25253367 |
cttttggtc |
25253359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 25317258 - 25317150
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | || ||||| |||||||||||||| |
|
|
| T |
25317258 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttga |
25317159 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
25317158 |
cttttggtc |
25317150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 28662639 - 28662552
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||| |||||||||||||| |||||| ||| ||||||||| || ||||||| |||||| ||| |||| ||||||||||||||||| |
|
|
| T |
28662639 |
ataaattaaagttgtaataagcattaaatacggagttgaaatgacggagtttgattaaaaagttatggtgaatacttaaataattaca |
28662552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 43361018 - 43361099
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
|||||||||||||| ||| |||||| ||||| |||| || |||||| ||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
43361018 |
taaagttgtaataagcatcaagtaccaagttaaaatgtcagagtttggctataaagttagggtgtatacttaaataattaca |
43361099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 27753670 - 27753739
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatc |
249 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||| | || |||||||||||||||||| | ||||||||| |
|
|
| T |
27753670 |
ttggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc |
27753739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 32052227 - 32052332
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacc-ttcctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||| ||||| | || ||||||||||||||||| | ||||||||||| |||| || ||||||| || ||||||||||| |
|
|
| T |
32052227 |
ttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttga |
32052326 |
T |
 |
| Q |
284 |
cttttg |
289 |
Q |
| |
|
|||||| |
|
|
| T |
32052327 |
cttttg |
32052332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 41817901 - 41817821
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattac |
176 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| || ||||||||||||| ||||||| |||| ||| | |||||| |
|
|
| T |
41817901 |
taaaattgtaataaacattaagtatgaagttgaaatgacggagtttgactaaaatgttagggtagatatttataaaattac |
41817821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 303418 - 303505
Alignment:
| Q |
90 |
ataaactaaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataattaca |
177 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
303418 |
ataaattaaagttgtaataagtattaaacacaaagttgaaatgatggagtttgactaaaaagttagggtggatacttaaataattaca |
303505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 13480211 - 13480336
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | | ||||||||||||||||| | ||||||||||| |||| | || ||||| || ||||||||||| |
|
|
| T |
13480211 |
ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga |
13480310 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||| ||||||||||||||| |
|
|
| T |
13480311 |
cttttggtcctaattacatctaatta |
13480336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 15819871 - 15819763
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| | ||||||||||| |||| | || ||||| |||||||||||||| |
|
|
| T |
15819871 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcatttga |
15819772 |
T |
 |
| Q |
284 |
cttttggtc |
292 |
Q |
| |
|
||||||||| |
|
|
| T |
15819771 |
cttttggtc |
15819763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 5064721 - 5064591
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatca |
278 |
Q |
| |
|
||||||||||||||| |||||| ||||||||| | | ||||||||||||||||| ||||||||||| |||| | || ||||| || |||||| |
|
|
| T |
5064721 |
ttggtttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatca |
5064622 |
T |
 |
| Q |
279 |
tttgacttttggtctcaattacatctaatta |
309 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |
|
|
| T |
5064621 |
tttgacttttggtcctaattacatctaatta |
5064591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 309
Target Start/End: Complemental strand, 738086 - 737953
Alignment:
| Q |
177 |
acattggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaa |
275 |
Q |
| |
|
||||||| |||||||||| |||||| |||||||||| | || ||||||||||||||| | | ||||||||||| |||| | ||| ||| || ||| |
|
|
| T |
738086 |
acattggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaa |
737987 |
T |
 |
| Q |
276 |
tcatttgacttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| |
|
|
| T |
737986 |
tcatttgacttttggtcctaattacatctgatta |
737953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 13405027 - 13405098
Alignment:
| Q |
104 |
taataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataatta |
175 |
Q |
| |
|
|||||| |||||| || |||||||||| || ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
13405027 |
taataagcattaaacacgaagttgaaatgactgagtttgactaaaaaactaggatggatacttaaataatta |
13405098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 343
Target Start/End: Original strand, 22540003 - 22540162
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaacctt-cctgcaattactaatcatttga |
283 |
Q |
| |
|
|||||||||||||| || | || |||||| ||| || | |||||||| ||||||||||||||||| ||||| || ||| ||||||| |||||||||| |
|
|
| T |
22540003 |
ttaaatatgtgtttagtccttgtaaatagatctcagttaagttttcgtcgctatacttactaatcctttcaaactttccctacaattaccaatcatttga |
22540102 |
T |
 |
| Q |
284 |
cttttggtctcaattacatctaattacttatgtgtcacataattagtgacgtggcgatga |
343 |
Q |
| |
|
||||||| ||| ||| | ||||||| |||| || | ||||||||||||||||||| |
|
|
| T |
22540103 |
attttggttctaatctcatttgattacttttgtggcaattgattagtgacgtggcgatga |
22540162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 289
Target Start/End: Complemental strand, 23292130 - 23292020
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaac-cttcctgcaattactaatca |
278 |
Q |
| |
|
|||| |||||||||| |||||| | |||||||| | || ||||||||||||||||| | ||||||||||| |||| | | ||||||| || |||||| |
|
|
| T |
23292130 |
ttggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatca |
23292031 |
T |
 |
| Q |
279 |
tttgacttttg |
289 |
Q |
| |
|
||||||||||| |
|
|
| T |
23292030 |
tttgacttttg |
23292020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 7536957 - 7536881
Alignment:
| Q |
96 |
taaagttgtaataaacattaagtacaaagttgaaataacaaagtttgactaaaaaattagggtggatacttaaataatt |
174 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||| | |||||||||||||| | || ||||||||||||||||| |
|
|
| T |
7536957 |
taaagttgtaacaaacattaagtgcgaagttgaaat--gagagtttgactaaaaagtaagtctggatacttaaataatt |
7536881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 21880710 - 21880620
Alignment:
| Q |
220 |
tttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttgacttttggtctcaattacatctaatta |
309 |
Q |
| |
|
||||||||||||||||| | ||||||||||| |||| | ||| ||||| || ||| |||||||||||||||| |||||||||| |||| |
|
|
| T |
21880710 |
tttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaagcatttgacttttggtcctaattacatctgatta |
21880620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 288
Target Start/End: Complemental strand, 22540856 - 22540774
Alignment:
| Q |
207 |
caaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcc-tgcaattactaatcatttgactttt |
288 |
Q |
| |
|
|||||| |||||| |||| ||||||||||||||||||||||| | |||||| | || ||| ||||||||||||||| |||| |
|
|
| T |
22540856 |
caaatatggctcggttgagttttcgtccctatacttactaattcaaccaaacttgccatgcggttactaatcatttgagtttt |
22540774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 20560931 - 20560995
Alignment:
| Q |
185 |
ttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatc |
249 |
Q |
| |
|
|||||||||| |||||| |||||||||| | || ||||||||||||||||| || ||| ||||| |
|
|
| T |
20560931 |
ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgtagttattaatc |
20560995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 292
Target Start/End: Original strand, 20994817 - 20994929
Alignment:
| Q |
180 |
ttggtttaaatatgtgtttcgtacctgcaaatagggctcgtttgaattttcgtccctatacttactaatcctcccaaaccttcctgcaattactaatcat |
279 |
Q |
| |
|
|||| |||||||||| |||||| |||| ||||| | || |||||||||||||| || | ||||||||||| | || | ||||||| || ||||||| |
|
|
| T |
20994817 |
ttggcttaaatatgtctttcgtccctgtaaatatagttcatttgaattttcgtctctgaagttactaatccttctaatctgccctgcaaatattaatcat |
20994916 |
T |
 |
| Q |
280 |
ttgacttttggtc |
292 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
20994917 |
ttaacttttggtc |
20994929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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