View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3545_high_20 (Length: 447)

Name: NF3545_high_20
Description: NF3545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3545_high_20
NF3545_high_20
[»] chr5 (56 HSPs)
chr5 (143-234)||(15060009-15060100)
chr5 (143-234)||(15058271-15058362)
chr5 (327-418)||(15058453-15058544)
chr5 (327-418)||(15061917-15062007)
chr5 (85-139)||(15058169-15058223)
chr5 (85-139)||(15059904-15059958)
chr5 (413-447)||(223179-223213)
chr5 (327-418)||(37508398-37508492)
chr5 (406-447)||(34082386-34082427)
chr5 (327-418)||(2020961-2021053)
chr5 (412-447)||(4125437-4125472)
chr5 (412-447)||(12049112-12049147)
chr5 (412-447)||(14647689-14647724)
chr5 (412-447)||(23263138-23263173)
chr5 (412-447)||(34606655-34606690)
chr5 (406-447)||(16666858-16666900)
chr5 (418-447)||(8339958-8339987)
chr5 (418-447)||(23502413-23502442)
chr5 (418-447)||(26323660-26323689)
chr5 (418-447)||(34169073-34169102)
chr5 (418-447)||(42739872-42739901)
chr5 (419-447)||(1055653-1055681)
chr5 (419-447)||(2710340-2710368)
chr5 (419-447)||(2710622-2710650)
chr5 (419-447)||(3020879-3020907)
chr5 (419-447)||(3223436-3223464)
chr5 (419-447)||(3223569-3223597)
chr5 (419-447)||(5088074-5088102)
chr5 (419-447)||(5088357-5088385)
chr5 (419-447)||(8986895-8986923)
chr5 (419-447)||(9071968-9071996)
chr5 (419-447)||(11480036-11480064)
chr5 (419-447)||(11709424-11709452)
chr5 (419-447)||(13765546-13765574)
chr5 (419-447)||(15526704-15526732)
chr5 (419-447)||(16521154-16521182)
chr5 (419-447)||(18266352-18266380)
chr5 (419-447)||(25631086-25631114)
chr5 (419-447)||(27264109-27264137)
chr5 (419-447)||(28394933-28394961)
chr5 (419-447)||(28620039-28620067)
chr5 (419-447)||(29401374-29401402)
chr5 (419-447)||(30894125-30894153)
chr5 (419-447)||(31172568-31172596)
chr5 (419-447)||(31456146-31456174)
chr5 (419-447)||(34734358-34734386)
chr5 (419-447)||(35306710-35306738)
chr5 (419-447)||(35306987-35307015)
chr5 (419-447)||(35818455-35818483)
chr5 (411-447)||(37333818-37333854)
chr5 (419-447)||(40297665-40297693)
chr5 (419-447)||(40687666-40687694)
chr5 (419-447)||(40687954-40687982)
chr5 (419-447)||(40768173-40768201)
chr5 (419-447)||(41140399-41140427)
chr5 (419-447)||(43586071-43586099)
[»] chr1 (61 HSPs)
chr1 (327-418)||(13255324-13255417)
chr1 (412-444)||(6742849-6742881)
chr1 (327-417)||(47905697-47905789)
chr1 (412-447)||(32341777-32341812)
chr1 (412-447)||(39427404-39427439)
chr1 (412-447)||(43914571-43914606)
chr1 (413-447)||(12690015-12690049)
chr1 (372-417)||(50476519-50476565)
chr1 (418-447)||(2371176-2371205)
chr1 (418-447)||(2371462-2371491)
chr1 (418-447)||(3263999-3264028)
chr1 (418-447)||(6182981-6183010)
chr1 (418-447)||(6183267-6183296)
chr1 (418-447)||(6491701-6491730)
chr1 (414-447)||(8774582-8774615)
chr1 (418-447)||(9058165-9058194)
chr1 (418-447)||(13791860-13791889)
chr1 (418-447)||(22075636-22075665)
chr1 (418-447)||(23793067-23793096)
chr1 (418-447)||(26434975-26435004)
chr1 (418-447)||(28503421-28503450)
chr1 (418-447)||(30294869-30294898)
chr1 (418-447)||(32341494-32341523)
chr1 (418-447)||(38622688-38622717)
chr1 (418-447)||(42407170-42407199)
chr1 (411-447)||(45884939-45884976)
chr1 (418-447)||(52149799-52149828)
chr1 (419-447)||(922448-922476)
chr1 (327-418)||(1688225-1688317)
chr1 (352-418)||(7963954-7964022)
chr1 (419-447)||(8770463-8770491)
chr1 (419-447)||(8774298-8774326)
chr1 (419-447)||(11018401-11018429)
chr1 (419-447)||(11018687-11018715)
chr1 (419-447)||(11051896-11051924)
chr1 (419-447)||(11052182-11052210)
chr1 (419-447)||(11204507-11204535)
chr1 (419-447)||(15161583-15161611)
chr1 (419-447)||(20017662-20017690)
chr1 (419-447)||(20596148-20596176)
chr1 (419-447)||(22204305-22204333)
chr1 (419-447)||(23341964-23341992)
chr1 (419-447)||(23342246-23342274)
chr1 (419-447)||(23356693-23356721)
chr1 (412-444)||(25820841-25820873)
chr1 (419-447)||(26861274-26861302)
chr1 (419-447)||(27396811-27396839)
chr1 (419-447)||(29794693-29794721)
chr1 (419-447)||(30288176-30288204)
chr1 (419-447)||(30295155-30295183)
chr1 (419-447)||(31797064-31797092)
chr1 (419-447)||(33777166-33777194)
chr1 (419-447)||(37028928-37028956)
chr1 (419-447)||(38622403-38622431)
chr1 (419-447)||(43914865-43914893)
chr1 (419-447)||(45012632-45012660)
chr1 (419-447)||(45664425-45664453)
chr1 (419-447)||(45885234-45885262)
chr1 (419-447)||(47113672-47113700)
chr1 (419-447)||(52143450-52143478)
chr1 (419-447)||(52233431-52233459)
[»] scaffold0028 (1 HSPs)
scaffold0028 (327-418)||(35463-35555)
[»] chr7 (63 HSPs)
chr7 (327-418)||(42620360-42620452)
chr7 (412-447)||(3925786-3925821)
chr7 (412-447)||(10318884-10318919)
chr7 (329-418)||(33406642-33406733)
chr7 (413-447)||(27513086-27513120)
chr7 (417-447)||(45231520-45231550)
chr7 (418-447)||(388186-388215)
chr7 (418-447)||(10319178-10319207)
chr7 (418-447)||(10385734-10385763)
chr7 (418-447)||(19233604-19233633)
chr7 (418-447)||(24775910-24775939)
chr7 (418-447)||(30699309-30699338)
chr7 (414-447)||(35924176-35924209)
chr7 (418-447)||(38445691-38445720)
chr7 (418-447)||(39976728-39976757)
chr7 (414-447)||(40436031-40436064)
chr7 (414-447)||(43408489-43408522)
chr7 (327-418)||(43778584-43778677)
chr7 (415-447)||(930704-930736)
chr7 (419-447)||(930993-931021)
chr7 (419-447)||(3235401-3235429)
chr7 (419-447)||(5096788-5096816)
chr7 (419-447)||(7974676-7974704)
chr7 (419-447)||(11900050-11900078)
chr7 (419-447)||(11900335-11900363)
chr7 (419-447)||(16879523-16879551)
chr7 (419-447)||(18296136-18296164)
chr7 (419-447)||(18363579-18363607)
chr7 (419-447)||(18852495-18852523)
chr7 (419-447)||(18852778-18852806)
chr7 (419-447)||(19194160-19194188)
chr7 (419-447)||(19778539-19778567)
chr7 (419-447)||(21782603-21782631)
chr7 (419-447)||(21917535-21917563)
chr7 (419-447)||(23909895-23909923)
chr7 (419-447)||(25683960-25683988)
chr7 (419-447)||(25982989-25983017)
chr7 (419-447)||(25986925-25986953)
chr7 (419-447)||(26612342-26612370)
chr7 (419-447)||(26612628-26612656)
chr7 (419-447)||(27432490-27432518)
chr7 (419-447)||(27512802-27512830)
chr7 (419-447)||(30141205-30141233)
chr7 (419-447)||(30757224-30757252)
chr7 (419-447)||(32555586-32555614)
chr7 (419-447)||(34288048-34288076)
chr7 (419-447)||(34533214-34533242)
chr7 (419-447)||(34533498-34533526)
chr7 (419-447)||(35121698-35121726)
chr7 (419-447)||(35437499-35437527)
chr7 (419-447)||(35711659-35711687)
chr7 (419-447)||(36376060-36376088)
chr7 (419-447)||(37452334-37452362)
chr7 (419-447)||(37996017-37996045)
chr7 (419-447)||(38053146-38053174)
chr7 (419-447)||(38879435-38879463)
chr7 (419-447)||(38882659-38882687)
chr7 (419-447)||(39753872-39753900)
chr7 (419-447)||(42997056-42997084)
chr7 (419-447)||(43632341-43632369)
chr7 (419-447)||(44214659-44214687)
chr7 (419-447)||(46622554-46622582)
chr7 (419-447)||(47731702-47731730)
[»] chr2 (35 HSPs)
chr2 (327-418)||(13765947-13766039)
chr2 (416-447)||(36987698-36987729)
chr2 (416-447)||(38731276-38731307)
chr2 (413-447)||(1375446-1375480)
chr2 (410-447)||(19256874-19256912)
chr2 (417-447)||(20494337-20494367)
chr2 (417-447)||(40493644-40493674)
chr2 (409-447)||(40493930-40493968)
chr2 (418-447)||(1375045-1375074)
chr2 (418-447)||(1466809-1466838)
chr2 (327-418)||(4041944-4042037)
chr2 (418-447)||(17798847-17798876)
chr2 (418-447)||(21552540-21552569)
chr2 (418-447)||(22194733-22194762)
chr2 (414-447)||(24205289-24205322)
chr2 (414-447)||(32661720-32661753)
chr2 (418-447)||(34850942-34850971)
chr2 (418-447)||(36987411-36987440)
chr2 (418-447)||(39642728-39642757)
chr2 (419-447)||(1467093-1467121)
chr2 (419-447)||(3263035-3263063)
chr2 (419-447)||(9715134-9715162)
chr2 (419-447)||(20436058-20436086)
chr2 (419-447)||(23000794-23000822)
chr2 (419-447)||(24895196-24895224)
chr2 (419-447)||(25429922-25429950)
chr2 (419-447)||(25430055-25430083)
chr2 (419-447)||(25888176-25888204)
chr2 (419-447)||(26717158-26717186)
chr2 (419-447)||(30218991-30219019)
chr2 (419-447)||(31784252-31784280)
chr2 (419-447)||(33004709-33004737)
chr2 (327-418)||(38293869-38293961)
chr2 (419-447)||(40445838-40445866)
chr2 (419-447)||(45127121-45127149)
[»] chr6 (38 HSPs)
chr6 (405-447)||(6261662-6261704)
chr6 (412-447)||(10893882-10893917)
chr6 (412-447)||(13042693-13042728)
chr6 (412-447)||(31740762-31740797)
chr6 (412-447)||(31833551-31833586)
chr6 (417-447)||(6261379-6261409)
chr6 (417-447)||(11746264-11746294)
chr6 (418-447)||(1814975-1815004)
chr6 (418-447)||(10977657-10977686)
chr6 (418-447)||(23883373-23883402)
chr6 (418-447)||(28930749-28930778)
chr6 (418-447)||(34705661-34705690)
chr6 (419-447)||(1815261-1815289)
chr6 (419-447)||(1896898-1896926)
chr6 (419-447)||(2100666-2100694)
chr6 (419-447)||(2565078-2565106)
chr6 (419-447)||(2565364-2565392)
chr6 (419-447)||(4405526-4405554)
chr6 (419-447)||(7391485-7391513)
chr6 (419-447)||(9126660-9126688)
chr6 (419-447)||(11213468-11213496)
chr6 (419-447)||(11322310-11322338)
chr6 (419-447)||(11614898-11614926)
chr6 (419-447)||(11745998-11746026)
chr6 (419-447)||(13042408-13042436)
chr6 (419-447)||(14997294-14997322)
chr6 (419-447)||(15272998-15273026)
chr6 (419-447)||(16765322-16765350)
chr6 (419-447)||(20080118-20080146)
chr6 (419-447)||(23291256-23291284)
chr6 (419-447)||(23585263-23585291)
chr6 (419-447)||(25749955-25749983)
chr6 (419-447)||(26171492-26171520)
chr6 (419-447)||(26716656-26716684)
chr6 (419-447)||(27223594-27223622)
chr6 (419-447)||(29697128-29697156)
chr6 (419-447)||(30965691-30965719)
chr6 (419-447)||(31951486-31951514)
[»] chr4 (68 HSPs)
chr4 (410-447)||(7666191-7666228)
chr4 (416-447)||(11159705-11159736)
chr4 (409-447)||(14578427-14578466)
chr4 (416-447)||(21536877-21536908)
chr4 (412-447)||(51696529-51696564)
chr4 (417-447)||(18988465-18988495)
chr4 (409-447)||(39946362-39946400)
chr4 (418-447)||(7666483-7666512)
chr4 (418-447)||(10045955-10045984)
chr4 (414-447)||(11529754-11529787)
chr4 (418-447)||(13019272-13019301)
chr4 (418-447)||(17262370-17262399)
chr4 (418-447)||(17266032-17266061)
chr4 (411-447)||(24415359-24415396)
chr4 (418-447)||(27247144-27247173)
chr4 (418-447)||(34363103-34363132)
chr4 (418-447)||(35364195-35364224)
chr4 (414-447)||(41205781-41205814)
chr4 (418-447)||(43821718-43821747)
chr4 (414-447)||(52046001-52046034)
chr4 (419-447)||(104200-104228)
chr4 (419-447)||(232976-233004)
chr4 (419-447)||(3770179-3770207)
chr4 (419-447)||(4902136-4902164)
chr4 (419-447)||(4902441-4902469)
chr4 (419-447)||(5344270-5344298)
chr4 (419-447)||(6386731-6386759)
chr4 (419-447)||(7396141-7396169)
chr4 (419-447)||(7644457-7644485)
chr4 (419-447)||(7705590-7705618)
chr4 (411-447)||(9592416-9592452)
chr4 (419-447)||(10046221-10046249)
chr4 (419-447)||(11530045-11530073)
chr4 (419-447)||(12640820-12640848)
chr4 (419-447)||(12641104-12641132)
chr4 (419-447)||(13021264-13021292)
chr4 (419-447)||(14578725-14578753)
chr4 (407-447)||(17554033-17554073)
chr4 (419-447)||(17554331-17554359)
chr4 (419-447)||(18988179-18988207)
chr4 (419-447)||(21537162-21537190)
chr4 (419-447)||(23315663-23315691)
chr4 (419-447)||(24415073-24415101)
chr4 (419-447)||(24542754-24542782)
chr4 (419-447)||(27246859-27246887)
chr4 (419-447)||(29548465-29548493)
chr4 (419-447)||(31250754-31250782)
chr4 (419-447)||(33338315-33338343)
chr4 (419-447)||(34362820-34362848)
chr4 (419-447)||(35835776-35835804)
chr4 (419-447)||(37289455-37289483)
chr4 (419-447)||(38371271-38371299)
chr4 (419-447)||(39136298-39136326)
chr4 (419-447)||(39136582-39136610)
chr4 (419-447)||(41205498-41205526)
chr4 (419-447)||(41787049-41787077)
chr4 (419-447)||(42672353-42672381)
chr4 (419-447)||(43821983-43822011)
chr4 (419-447)||(44921895-44921923)
chr4 (419-447)||(45289785-45289813)
chr4 (419-447)||(47821475-47821503)
chr4 (419-447)||(47853976-47854004)
chr4 (419-447)||(51537430-51537458)
chr4 (419-447)||(52045721-52045749)
chr4 (419-447)||(52310801-52310829)
chr4 (419-447)||(52311087-52311115)
chr4 (419-447)||(54215956-54215984)
chr4 (419-447)||(55586902-55586930)
[»] scaffold0594 (2 HSPs)
scaffold0594 (411-447)||(5878-5914)
scaffold0594 (419-447)||(5592-5620)
[»] chr8 (56 HSPs)
chr8 (411-447)||(4167485-4167521)
chr8 (411-447)||(18553256-18553292)
chr8 (412-447)||(6745279-6745314)
chr8 (412-447)||(32332133-32332168)
chr8 (412-447)||(37205826-37205861)
chr8 (412-447)||(45209261-45209296)
chr8 (417-447)||(5734470-5734500)
chr8 (372-418)||(6839837-6839883)
chr8 (417-447)||(7318920-7318950)
chr8 (417-447)||(39626253-39626283)
chr8 (417-447)||(39635803-39635833)
chr8 (418-447)||(414666-414695)
chr8 (418-447)||(2321802-2321831)
chr8 (418-447)||(4107133-4107162)
chr8 (418-447)||(6641883-6641912)
chr8 (418-447)||(7151127-7151156)
chr8 (418-447)||(18531118-18531147)
chr8 (418-447)||(20095972-20096001)
chr8 (418-447)||(20283960-20283989)
chr8 (418-447)||(20814026-20814055)
chr8 (418-447)||(21070588-21070617)
chr8 (418-447)||(23233780-23233809)
chr8 (418-447)||(31190642-31190671)
chr8 (418-447)||(39515557-39515586)
chr8 (418-447)||(40918659-40918688)
chr8 (419-447)||(414940-414968)
chr8 (419-447)||(1657670-1657698)
chr8 (419-447)||(2321516-2321544)
chr8 (419-447)||(6014419-6014447)
chr8 (419-447)||(6107117-6107145)
chr8 (419-447)||(6335613-6335641)
chr8 (419-447)||(8870259-8870287)
chr8 (419-447)||(14032036-14032064)
chr8 (419-447)||(15187928-15187956)
chr8 (419-447)||(17943358-17943386)
chr8 (415-447)||(20056407-20056439)
chr8 (419-447)||(20095686-20095714)
chr8 (419-447)||(23234065-23234093)
chr8 (419-447)||(27339543-27339571)
chr8 (419-447)||(27822875-27822903)
chr8 (419-447)||(30359127-30359155)
chr8 (419-447)||(30845845-30845873)
chr8 (419-447)||(32318791-32318819)
chr8 (419-447)||(36226700-36226728)
chr8 (419-447)||(36801649-36801677)
chr8 (419-447)||(37639507-37639535)
chr8 (419-447)||(37953374-37953402)
chr8 (419-447)||(38593187-38593215)
chr8 (419-447)||(39616836-39616864)
chr8 (419-447)||(42267456-42267484)
chr8 (419-447)||(42267743-42267771)
chr8 (419-447)||(42642373-42642401)
chr8 (419-447)||(42866378-42866406)
chr8 (419-447)||(42906659-42906687)
chr8 (327-416)||(43733128-43733219)
chr8 (419-447)||(45106435-45106463)
[»] scaffold0474 (1 HSPs)
scaffold0474 (412-447)||(7714-7749)
[»] scaffold0005 (2 HSPs)
scaffold0005 (409-447)||(238909-238948)
scaffold0005 (419-447)||(238622-238650)
[»] chr3 (70 HSPs)
chr3 (416-447)||(22202481-22202512)
chr3 (412-447)||(33576694-33576729)
chr3 (412-447)||(37181997-37182032)
chr3 (409-447)||(44895638-44895677)
chr3 (411-445)||(32507919-32507953)
chr3 (413-447)||(53192108-53192142)
chr3 (414-444)||(54717160-54717190)
chr3 (418-447)||(2118999-2119028)
chr3 (418-447)||(3212437-3212466)
chr3 (418-447)||(5577218-5577247)
chr3 (418-447)||(17483560-17483589)
chr3 (418-447)||(17483843-17483872)
chr3 (418-447)||(20982279-20982308)
chr3 (418-447)||(25053869-25053898)
chr3 (418-447)||(27857420-27857449)
chr3 (418-447)||(27984138-27984167)
chr3 (414-447)||(40082475-40082508)
chr3 (418-447)||(41282132-41282161)
chr3 (418-447)||(44184256-44184285)
chr3 (418-447)||(45760518-45760547)
chr3 (418-447)||(47530338-47530367)
chr3 (418-447)||(51213306-51213335)
chr3 (418-447)||(53192398-53192427)
chr3 (419-447)||(257721-257749)
chr3 (419-447)||(2239515-2239543)
chr3 (419-447)||(2711701-2711729)
chr3 (419-447)||(8313949-8313977)
chr3 (419-447)||(9153477-9153505)
chr3 (419-447)||(10864115-10864143)
chr3 (419-447)||(10864404-10864432)
chr3 (419-447)||(12881235-12881263)
chr3 (419-447)||(12881500-12881528)
chr3 (419-447)||(14904442-14904470)
chr3 (419-447)||(17916368-17916396)
chr3 (419-447)||(19391638-19391666)
chr3 (419-447)||(19391988-19392016)
chr3 (419-447)||(19914476-19914504)
chr3 (419-447)||(19914757-19914785)
chr3 (419-447)||(20982544-20982572)
chr3 (419-447)||(21841727-21841755)
chr3 (419-447)||(25126283-25126311)
chr3 (419-447)||(26494685-26494713)
chr3 (419-447)||(27748244-27748272)
chr3 (419-447)||(27748528-27748556)
chr3 (419-447)||(27766518-27766546)
chr3 (419-447)||(27766802-27766830)
chr3 (411-447)||(28097709-28097745)
chr3 (419-447)||(28964153-28964181)
chr3 (419-447)||(28964439-28964467)
chr3 (419-447)||(31117620-31117648)
chr3 (415-447)||(31869480-31869512)
chr3 (419-447)||(32205132-32205160)
chr3 (419-447)||(33621866-33621894)
chr3 (419-447)||(38511942-38511970)
chr3 (419-447)||(41223513-41223541)
chr3 (419-447)||(41281845-41281873)
chr3 (419-447)||(42230316-42230344)
chr3 (419-447)||(42465691-42465719)
chr3 (419-447)||(44177288-44177316)
chr3 (419-447)||(44183972-44184000)
chr3 (419-447)||(44624511-44624539)
chr3 (419-447)||(44895933-44895961)
chr3 (419-447)||(45743899-45743927)
chr3 (419-447)||(47423413-47423441)
chr3 (419-447)||(47530625-47530653)
chr3 (419-447)||(47943745-47943773)
chr3 (419-447)||(50033526-50033554)
chr3 (419-447)||(52916859-52916887)
chr3 (419-447)||(53531806-53531834)
chr3 (419-447)||(53532091-53532119)
[»] scaffold0328 (1 HSPs)
scaffold0328 (417-447)||(16039-16069)
[»] scaffold0001 (2 HSPs)
scaffold0001 (413-447)||(400991-401025)
scaffold0001 (419-447)||(400704-400732)
[»] scaffold0213 (1 HSPs)
scaffold0213 (418-447)||(21332-21361)
[»] scaffold0121 (2 HSPs)
scaffold0121 (418-447)||(22294-22323)
scaffold0121 (418-447)||(22561-22590)
[»] scaffold0067 (1 HSPs)
scaffold0067 (408-444)||(26181-26218)
[»] scaffold0016 (1 HSPs)
scaffold0016 (412-445)||(75103-75136)
[»] scaffold0014 (3 HSPs)
scaffold0014 (414-447)||(12943-12976)
scaffold0014 (419-447)||(78990-79018)
scaffold0014 (419-447)||(79272-79300)
[»] scaffold1171 (1 HSPs)
scaffold1171 (419-447)||(819-847)
[»] scaffold0922 (1 HSPs)
scaffold0922 (419-447)||(118-146)
[»] scaffold0777 (1 HSPs)
scaffold0777 (419-447)||(155-183)
[»] scaffold0693 (1 HSPs)
scaffold0693 (419-447)||(4806-4834)
[»] scaffold0606 (1 HSPs)
scaffold0606 (419-447)||(6868-6896)
[»] scaffold0370 (2 HSPs)
scaffold0370 (419-447)||(10913-10941)
scaffold0370 (419-447)||(16203-16231)
[»] scaffold0272 (1 HSPs)
scaffold0272 (419-447)||(10559-10587)
[»] scaffold0250 (1 HSPs)
scaffold0250 (412-444)||(21831-21863)
[»] scaffold0182 (1 HSPs)
scaffold0182 (419-447)||(20595-20623)
[»] scaffold0122 (2 HSPs)
scaffold0122 (419-447)||(29650-29678)
scaffold0122 (419-447)||(29936-29964)
[»] scaffold0078 (1 HSPs)
scaffold0078 (411-447)||(20911-20947)
[»] scaffold0035 (1 HSPs)
scaffold0035 (419-447)||(81587-81615)


Alignment Details
Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 15060009 - 15060100
Alignment:
Q  143 ccctaaaattttgactaataatagatgatattcttatgctttgtttgggaatttggaggtgagaaatatcaaaaatagaaaaaactttcaca 234  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15060009 ccctaaaattttgactaataatcgatgatattcttatgctttgtttgggaatttggaggtgagaaatatcaaaaatagaaaaaactttcaca 15060100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 15058271 - 15058362
Alignment:
Q  143 ccctaaaattttgactaataatagatgatattcttatgctttgtttgggaatttggaggtgagaaatatcaaaaatagaaaaaactttcaca 234  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15058271 ccctaaaattttgactaatgatcgatgatattcttatgctttttttggaaatttggaggtgagaaatatcaaaaatagaaaaaactttcaca 15058362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 15058453 - 15058544
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaattttgagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15058453 tcatataaactctctaaaattcctaaaaaccttctcccaatacaattttgagttcctcaaatgagggtaattttgtactatgaataaaaaat 15058544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 15061917 - 15062007
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaattttgagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  15061917 tcatataaaccatctaaaactcctaaaaatcttctcccaatacaattttgagtt-ctcaaataaggggaattttgtactatgaataaaaaat 15062007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 15058169 - 15058223
Alignment:
Q  85 gaatatttaaaccctaatgttttgggctccctgcgccggatcaaatttattattt 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15058169 gaatatttaaaccctaatgttttgggctccctgcgctggatcaaatttattattt 15058223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 15059904 - 15059958
Alignment:
Q  85 gaatatttaaaccctaatgttttgggctccctgcgccggatcaaatttattattt 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15059904 gaatatttaaaccctaatgttttgggctccctgcgctggatcaaatttattattt 15059958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 447
Target Start/End: Complemental strand, 223213 - 223179
Alignment:
Q  413 aaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||||||    
T  223213 aaaaatggcttaattgcacttttggacccctatct 223179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 37508398 - 37508492
Alignment:
Q  327 tcatataaaccctctaaaactcct-aaaaaccttctcccactacaatttt-gagttcctc-aaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||  ||||||| || |||| ||||||||| ||||||||| |||||||||||||||| || ||||||||||||||    
T  37508398 tcatataaaccctccataaccccccaaaaaccctcccccaatacaatttttgagttcctccaaatgaggggaattttttattatgaataaaaaat 37508492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 34082427 - 34082386
Alignment:
Q  406 atgaataaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  34082427 atgaataaataaaggcttaattgcacttttggacccctatct 34082386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 418
Target Start/End: Complemental strand, 2021053 - 2020961
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||| |||||| || |||| ||||||||| ||||||||| || |||||| ||||| || ||||| ||||||||    
T  2021053 tcatataaaccctccataacccctcaaaaccctcccccaatacaatttttgagttcctccaaagagggggattttttattatgagtaaaaaat 2020961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 4125437 - 4125472
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  4125437 aaaaaaaggcttaattgcacttttggacccctatct 4125472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 12049112 - 12049147
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  12049112 aaaaaaaggcttaattgcacttttggacccctatct 12049147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 14647689 - 14647724
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  14647689 aaaaaaaggcttaattgcacttttggacccctatct 14647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 23263138 - 23263173
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  23263138 aaaaaaaggcttaattgcacttttggacccctatct 23263173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 34606690 - 34606655
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  34606690 aaaaaaaggcttaattgcacttttggacccctatct 34606655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 16666900 - 16666858
Alignment:
Q  406 atgaataaaa-aatggcttaattgcacttttggacccctatct 447  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  16666900 atgaataaaataaaggcttaattgcacttttggacccctatct 16666858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 8339958 - 8339987
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  8339958 tggcttaattgcacttttggacccctatct 8339987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 23502442 - 23502413
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  23502442 tggcttaattgcacttttggacccctatct 23502413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 26323689 - 26323660
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  26323689 tggcttaattgcacttttggacccctatct 26323660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 34169102 - 34169073
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  34169102 tggcttaattgcacttttggacccctatct 34169073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 42739901 - 42739872
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  42739901 tggcttaattgcacttttggacccctatct 42739872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 1055681 - 1055653
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  1055681 ggcttaattgcacttttggacccctatct 1055653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 2710340 - 2710368
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2710340 ggcttaattgcacttttggacccctatct 2710368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 2710650 - 2710622
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2710650 ggcttaattgcacttttggacccctatct 2710622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 3020907 - 3020879
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  3020907 ggcttaattgcacttttggacccctatct 3020879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 3223436 - 3223464
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  3223436 ggcttaattgcacttttggacccctatct 3223464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 3223597 - 3223569
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  3223597 ggcttaattgcacttttggacccctatct 3223569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 5088074 - 5088102
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  5088074 ggcttaattgcacttttggacccctatct 5088102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 5088385 - 5088357
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  5088385 ggcttaattgcacttttggacccctatct 5088357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 8986923 - 8986895
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  8986923 ggcttaattgcacttttggacccctatct 8986895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 9071968 - 9071996
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  9071968 ggcttaattgcacttttggacccctatct 9071996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11480036 - 11480064
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11480036 ggcttaattgcacttttggacccctatct 11480064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11709452 - 11709424
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11709452 ggcttaattgcacttttggacccctatct 11709424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 13765574 - 13765546
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  13765574 ggcttaattgcacttttggacccctatct 13765546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 15526704 - 15526732
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  15526704 ggcttaattgcacttttggacccctatct 15526732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 16521154 - 16521182
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  16521154 ggcttaattgcacttttggacccctatct 16521182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 18266352 - 18266380
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  18266352 ggcttaattgcacttttggacccctatct 18266380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 25631086 - 25631114
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25631086 ggcttaattgcacttttggacccctatct 25631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27264109 - 27264137
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27264109 ggcttaattgcacttttggacccctatct 27264137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 28394933 - 28394961
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  28394933 ggcttaattgcacttttggacccctatct 28394961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 28620039 - 28620067
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  28620039 ggcttaattgcacttttggacccctatct 28620067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 29401402 - 29401374
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  29401402 ggcttaattgcacttttggacccctatct 29401374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 30894125 - 30894153
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30894125 ggcttaattgcacttttggacccctatct 30894153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 31172568 - 31172596
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31172568 ggcttaattgcacttttggacccctatct 31172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 31456174 - 31456146
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31456174 ggcttaattgcacttttggacccctatct 31456146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 34734386 - 34734358
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  34734386 ggcttaattgcacttttggacccctatct 34734358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 35306710 - 35306738
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35306710 ggcttaattgcacttttggacccctatct 35306738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 35307015 - 35306987
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35307015 ggcttaattgcacttttggacccctatct 35306987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 35818483 - 35818455
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35818483 ggcttaattgcacttttggacccctatct 35818455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 37333854 - 37333818
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  37333854 taaaaaaaggcttaattgcacttttggacccttatct 37333818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 40297665 - 40297693
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  40297665 ggcttaattgcacttttggacccctatct 40297693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 40687666 - 40687694
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  40687666 ggcttaattgcacttttggacccctatct 40687694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 40687982 - 40687954
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  40687982 ggcttaattgcacttttggacccctatct 40687954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 40768201 - 40768173
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  40768201 ggcttaattgcacttttggacccctatct 40768173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 41140427 - 41140399
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  41140427 ggcttaattgcacttttggacccctatct 41140399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 43586099 - 43586071
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  43586099 ggcttaattgcacttttggacccctatct 43586071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 418
Target Start/End: Complemental strand, 13255417 - 13255324
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaa-ttttgagtt-cctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||||| ||| ||  |||||| ||||||||||||| ||||||||| || ||||||||||| ||||| || ||||| ||||||||    
T  13255417 tcatataaaccctctataaccccccaaaaccctctcccactacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaat 13255324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 6742849 - 6742881
Alignment:
Q  412 aaaaaatggcttaattgcacttttggaccccta 444  Q
    |||||||||||||||||||||||||||||||||    
T  6742849 aaaaaatggcttaattgcacttttggaccccta 6742881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 417
Target Start/End: Original strand, 47905697 - 47905789
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctc-aaatgaggggaattttgtactatgaataaaaaa 417  Q
    |||||||||||||| | ||| || ||||||| || |||| ||||||||| ||||||| | |||||||||||||||| || ||||| |||||||    
T  47905697 tcatataaaccctccataacccccaaaaaccctcccccaatacaatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaa 47905789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 32341812 - 32341777
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  32341812 aaaaaaaggcttaattgcacttttggacccctatct 32341777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 39427404 - 39427439
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  39427404 aaaaaaaggcttaattgcacttttggacccctatct 39427439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 43914571 - 43914606
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  43914571 aaaaaaaggcttaattgcacttttggacccctatct 43914606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 447
Target Start/End: Original strand, 12690015 - 12690049
Alignment:
Q  413 aaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||| |||||||||||||||||||||||||||||    
T  12690015 aaaaaaggcttaattgcacttttggacccctatct 12690049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 50476565 - 50476519
Alignment:
Q  372 ttttgagttcc-tcaaatgaggggaattttgtactatgaataaaaaa 417  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||    
T  50476565 ttttgagttccctcaaatgagggggattttgtattatgaataaaaaa 50476519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 2371176 - 2371205
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  2371176 tggcttaattgcacttttggacccctatct 2371205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 2371491 - 2371462
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  2371491 tggcttaattgcacttttggacccctatct 2371462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 3263999 - 3264028
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  3263999 tggcttaattgcacttttggacccctatct 3264028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 6182981 - 6183010
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  6182981 tggcttaattgcacttttggacccctatct 6183010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 6183296 - 6183267
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  6183296 tggcttaattgcacttttggacccctatct 6183267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 6491730 - 6491701
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  6491730 tggcttaattgcacttttggacccctatct 6491701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 8774615 - 8774582
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||| |||||    
T  8774615 aaaatggcttaattgcacttttggacccttatct 8774582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 9058165 - 9058194
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  9058165 tggcttaattgcacttttggacccctatct 9058194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 13791889 - 13791860
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  13791889 tggcttaattgcacttttggacccctatct 13791860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 22075665 - 22075636
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  22075665 tggcttaattgcacttttggacccctatct 22075636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 23793096 - 23793067
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  23793096 tggcttaattgcacttttggacccctatct 23793067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 26435004 - 26434975
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  26435004 tggcttaattgcacttttggacccctatct 26434975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 28503450 - 28503421
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  28503450 tggcttaattgcacttttggacccctatct 28503421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 30294869 - 30294898
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  30294869 tggcttaattgcacttttggacccctatct 30294898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 32341494 - 32341523
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  32341494 tggcttaattgcacttttggacccctatct 32341523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 38622717 - 38622688
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  38622717 tggcttaattgcacttttggacccctatct 38622688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 42407199 - 42407170
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  42407199 tggcttaattgcacttttggacccctatct 42407170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 45884939 - 45884976
Alignment:
Q  411 taaaaaat-ggcttaattgcacttttggacccctatct 447  Q
    |||||||| |||||||||||||||||||||||||||||    
T  45884939 taaaaaataggcttaattgcacttttggacccctatct 45884976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 52149828 - 52149799
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  52149828 tggcttaattgcacttttggacccctatct 52149799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 922476 - 922448
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  922476 ggcttaattgcacttttggacccctatct 922448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 1688225 - 1688317
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||  |||||  || |||| ||||||||| ||||||| ||||||||||| ||||| || ||||| ||||||||    
T  1688225 tcatataaaccctccataaccccccaaaactctcccccaatacaatttttgagttccccaaatgagggggattttttattatgagtaaaaaat 1688317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 7964022 - 7963954
Alignment:
Q  352 aaaaccttctcccactacaatttt-gagttcctc-aaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||| || |||| ||||||||| ||||||||| |||||||||| ||||| |||||||| ||||||||    
T  7964022 aaaaccctcccccaatacaatttttgagttcctccaaatgagggggattttttactatgagtaaaaaat 7963954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 8770463 - 8770491
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  8770463 ggcttaattgcacttttggacccctatct 8770491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 8774298 - 8774326
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  8774298 ggcttaattgcacttttggacccctatct 8774326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11018401 - 11018429
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11018401 ggcttaattgcacttttggacccctatct 11018429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11018715 - 11018687
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11018715 ggcttaattgcacttttggacccctatct 11018687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11051896 - 11051924
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11051896 ggcttaattgcacttttggacccctatct 11051924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11052210 - 11052182
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11052210 ggcttaattgcacttttggacccctatct 11052182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11204507 - 11204535
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11204507 ggcttaattgcacttttggacccctatct 11204535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 15161611 - 15161583
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  15161611 ggcttaattgcacttttggacccctatct 15161583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 20017690 - 20017662
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20017690 ggcttaattgcacttttggacccctatct 20017662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 20596176 - 20596148
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20596176 ggcttaattgcacttttggacccctatct 20596148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 22204305 - 22204333
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  22204305 ggcttaattgcacttttggacccctatct 22204333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 23341964 - 23341992
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23341964 ggcttaattgcacttttggacccctatct 23341992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 23342274 - 23342246
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23342274 ggcttaattgcacttttggacccctatct 23342246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 23356693 - 23356721
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23356693 ggcttaattgcacttttggacccctatct 23356721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 25820873 - 25820841
Alignment:
Q  412 aaaaaatggcttaattgcacttttggaccccta 444  Q
    |||||| ||||||||||||||||||||||||||    
T  25820873 aaaaaaaggcttaattgcacttttggaccccta 25820841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 26861274 - 26861302
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26861274 ggcttaattgcacttttggacccctatct 26861302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 27396839 - 27396811
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27396839 ggcttaattgcacttttggacccctatct 27396811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 29794693 - 29794721
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  29794693 ggcttaattgcacttttggacccctatct 29794721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 30288176 - 30288204
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30288176 ggcttaattgcacttttggacccctatct 30288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 30295183 - 30295155
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30295183 ggcttaattgcacttttggacccctatct 30295155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 31797064 - 31797092
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31797064 ggcttaattgcacttttggacccctatct 31797092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 33777166 - 33777194
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  33777166 ggcttaattgcacttttggacccctatct 33777194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 37028928 - 37028956
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  37028928 ggcttaattgcacttttggacccctatct 37028956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 38622403 - 38622431
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38622403 ggcttaattgcacttttggacccctatct 38622431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 43914893 - 43914865
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  43914893 ggcttaattgcacttttggacccctatct 43914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 45012632 - 45012660
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45012632 ggcttaattgcacttttggacccctatct 45012660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 45664453 - 45664425
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45664453 ggcttaattgcacttttggacccctatct 45664425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 45885262 - 45885234
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45885262 ggcttaattgcacttttggacccctatct 45885234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 47113700 - 47113672
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47113700 ggcttaattgcacttttggacccctatct 47113672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 52143478 - 52143450
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  52143478 ggcttaattgcacttttggacccctatct 52143450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 52233431 - 52233459
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  52233431 ggcttaattgcacttttggacccctatct 52233459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 35463 - 35555
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||  |||||| || |||| ||||||||| ||||||| ||||||||||||||||| || ||||| ||||||||    
T  35463 tcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttccccaaatgaggggaattttttattatgagtaaaaaat 35555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 42620360 - 42620452
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||| |||| | || |||| ||||||||| ||||||| ||||||||||||||||| || ||||| ||||||||    
T  42620360 tcatataaaccctccataacccctcaaaatcctcccccaatacaatttttgagttccccaaatgaggggaattttttattatgagtaaaaaat 42620452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 3925786 - 3925821
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  3925786 aaaaaaaggcttaattgcacttttggacccctatct 3925821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 10318884 - 10318919
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  10318884 aaaaaaaggcttaattgcacttttggacccctatct 10318919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 33406642 - 33406733
Alignment:
Q  329 atataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcc-tcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||| | ||| ||  |||||| ||||||| ||||||||| ||||||| |||||||||||| ||||| || ||||| ||||||||    
T  33406642 atataaaccctccataaccccccaaaaccctctcccaatacaatttttgagttccctcaaatgagggggattttttattatgagtaaaaaat 33406733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 447
Target Start/End: Complemental strand, 27513120 - 27513086
Alignment:
Q  413 aaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||| |||||||||||||||||||||||||||||    
T  27513120 aaaaaaggcttaattgcacttttggacccctatct 27513086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Original strand, 45231520 - 45231550
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  45231520 atggcttaattgcacttttggacccctatct 45231550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 388215 - 388186
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  388215 tggcttaattgcacttttggacccctatct 388186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 10319207 - 10319178
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  10319207 tggcttaattgcacttttggacccctatct 10319178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 10385763 - 10385734
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  10385763 tggcttaattgcacttttggacccctatct 10385734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 19233633 - 19233604
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  19233633 tggcttaattgcacttttggacccctatct 19233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 24775939 - 24775910
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  24775939 tggcttaattgcacttttggacccctatct 24775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 30699338 - 30699309
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  30699338 tggcttaattgcacttttggacccctatct 30699309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 35924209 - 35924176
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  35924209 aaaaaggcttaattgcacttttggacccctatct 35924176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 38445720 - 38445691
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  38445720 tggcttaattgcacttttggacccctatct 38445691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 39976728 - 39976757
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  39976728 tggcttaattgcacttttggacccctatct 39976757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 40436031 - 40436064
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  40436031 aaaaaggcttaattgcacttttggacccctatct 40436064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 43408522 - 43408489
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  43408522 aaaaaggcttaattgcacttttggacccctatct 43408489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 43778584 - 43778677
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaattttg-agttcct-caaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||  |||||| || |||| |||||||||  ||||||| ||||||||||||||||| || ||||| ||||||||    
T  43778584 tcatataaaccctccataaccccccaaaaccctcccccaatacaattttttagttccttcaaatgaggggaattttttattatgagtaaaaaat 43778677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 930704 - 930736
Alignment:
Q  415 aaatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||| |||||||||||||||||||    
T  930704 aaatggcttaattacacttttggacccctatct 930736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 931021 - 930993
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  931021 ggcttaattgcacttttggacccctatct 930993  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 3235429 - 3235401
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  3235429 ggcttaattgcacttttggacccctatct 3235401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 5096788 - 5096816
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  5096788 ggcttaattgcacttttggacccctatct 5096816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 7974704 - 7974676
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  7974704 ggcttaattgcacttttggacccctatct 7974676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11900050 - 11900078
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11900050 ggcttaattgcacttttggacccctatct 11900078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11900363 - 11900335
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11900363 ggcttaattgcacttttggacccctatct 11900335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 16879551 - 16879523
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  16879551 ggcttaattgcacttttggacccctatct 16879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 18296164 - 18296136
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  18296164 ggcttaattgcacttttggacccctatct 18296136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 18363607 - 18363579
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  18363607 ggcttaattgcacttttggacccctatct 18363579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 18852495 - 18852523
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  18852495 ggcttaattgcacttttggacccctatct 18852523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 18852806 - 18852778
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  18852806 ggcttaattgcacttttggacccctatct 18852778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 19194160 - 19194188
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  19194160 ggcttaattgcacttttggacccctatct 19194188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 19778567 - 19778539
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  19778567 ggcttaattgcacttttggacccctatct 19778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 21782603 - 21782631
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  21782603 ggcttaattgcacttttggacccctatct 21782631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 21917563 - 21917535
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  21917563 ggcttaattgcacttttggacccctatct 21917535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 23909895 - 23909923
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23909895 ggcttaattgcacttttggacccctatct 23909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 25683988 - 25683960
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25683988 ggcttaattgcacttttggacccctatct 25683960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 25982989 - 25983017
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25982989 ggcttaattgcacttttggacccctatct 25983017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 25986925 - 25986953
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25986925 ggcttaattgcacttttggacccctatct 25986953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 26612342 - 26612370
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26612342 ggcttaattgcacttttggacccctatct 26612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 26612656 - 26612628
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26612656 ggcttaattgcacttttggacccctatct 26612628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27432490 - 27432518
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27432490 ggcttaattgcacttttggacccctatct 27432518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27512802 - 27512830
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27512802 ggcttaattgcacttttggacccctatct 27512830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 30141233 - 30141205
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30141233 ggcttaattgcacttttggacccctatct 30141205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 30757224 - 30757252
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30757224 ggcttaattgcacttttggacccctatct 30757252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 32555614 - 32555586
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  32555614 ggcttaattgcacttttggacccctatct 32555586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 34288048 - 34288076
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  34288048 ggcttaattgcacttttggacccctatct 34288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 34533214 - 34533242
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  34533214 ggcttaattgcacttttggacccctatct 34533242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 34533526 - 34533498
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  34533526 ggcttaattgcacttttggacccctatct 34533498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 35121726 - 35121698
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35121726 ggcttaattgcacttttggacccctatct 35121698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 35437527 - 35437499
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35437527 ggcttaattgcacttttggacccctatct 35437499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 35711659 - 35711687
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35711659 ggcttaattgcacttttggacccctatct 35711687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 36376060 - 36376088
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  36376060 ggcttaattgcacttttggacccctatct 36376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 37452362 - 37452334
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  37452362 ggcttaattgcacttttggacccctatct 37452334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 37996017 - 37996045
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  37996017 ggcttaattgcacttttggacccctatct 37996045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 38053146 - 38053174
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38053146 ggcttaattgcacttttggacccctatct 38053174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 38879463 - 38879435
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38879463 ggcttaattgcacttttggacccctatct 38879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 38882687 - 38882659
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38882687 ggcttaattgcacttttggacccctatct 38882659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 39753872 - 39753900
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  39753872 ggcttaattgcacttttggacccctatct 39753900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 42997056 - 42997084
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42997056 ggcttaattgcacttttggacccctatct 42997084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 43632341 - 43632369
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  43632341 ggcttaattgcacttttggacccctatct 43632369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 44214659 - 44214687
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  44214659 ggcttaattgcacttttggacccctatct 44214687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 46622554 - 46622582
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  46622554 ggcttaattgcacttttggacccctatct 46622582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 47731702 - 47731730
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47731702 ggcttaattgcacttttggacccctatct 47731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 13765947 - 13766039
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||  |||||| || |||| ||||||||| ||||||| ||||||||||||||||| || ||||| ||||||||    
T  13765947 tcatataaaccctccacaaccccccaaaaccctcccccaatacaatttttgagttccccaaatgaggggaattttttattatgagtaaaaaat 13766039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 447
Target Start/End: Complemental strand, 36987729 - 36987698
Alignment:
Q  416 aatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||||    
T  36987729 aatggcttaattgcacttttggacccctatct 36987698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 447
Target Start/End: Original strand, 38731276 - 38731307
Alignment:
Q  416 aatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||||    
T  38731276 aatggcttaattgcacttttggacccctatct 38731307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 447
Target Start/End: Complemental strand, 1375480 - 1375446
Alignment:
Q  413 aaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| |||||||||||||||||||||||||||    
T  1375480 aaaaatgacttaattgcacttttggacccctatct 1375446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 19256912 - 19256874
Alignment:
Q  410 ataaaaaat-ggcttaattgcacttttggacccctatct 447  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  19256912 ataaaaaataggcttaattgcacttttggacccctatct 19256874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Original strand, 20494337 - 20494367
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  20494337 atggcttaattgcacttttggacccctatct 20494367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Original strand, 40493644 - 40493674
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  40493644 atggcttaattgcacttttggacccctatct 40493674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 40493968 - 40493930
Alignment:
Q  409 aataaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  40493968 aataaaataaggcttaattgcacttttggacccctatct 40493930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 1375045 - 1375074
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  1375045 tggcttaattgcacttttggacccctatct 1375074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 1466809 - 1466838
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  1466809 tggcttaattgcacttttggacccctatct 1466838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 418
Target Start/End: Complemental strand, 4042037 - 4041944
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcct-caaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | ||| ||  |||||| || |||| ||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||    
T  4042037 tcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttccttcaaatgagggggattttttattatgagtaaaaaat 4041944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 17798847 - 17798876
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  17798847 tggcttaattgcacttttggacccctatct 17798876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 21552540 - 21552569
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  21552540 tggcttaattgcacttttggacccctatct 21552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 22194762 - 22194733
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  22194762 tggcttaattgcacttttggacccctatct 22194733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 24205289 - 24205322
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  24205289 aaaaaggcttaattgcacttttggacccctatct 24205322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 32661753 - 32661720
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||| |||||||||    
T  32661753 aaaatggcttaattgcacttttggccccctatct 32661720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 34850971 - 34850942
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  34850971 tggcttaattgcacttttggacccctatct 34850942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 36987411 - 36987440
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  36987411 tggcttaattgcacttttggacccctatct 36987440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 39642728 - 39642757
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  39642728 tggcttaattgcacttttggacccctatct 39642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 1467121 - 1467093
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  1467121 ggcttaattgcacttttggacccctatct 1467093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 3263035 - 3263063
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  3263035 ggcttaattgcacttttggacccctatct 3263063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 9715162 - 9715134
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  9715162 ggcttaattgcacttttggacccctatct 9715134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 20436058 - 20436086
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20436058 ggcttaattgcacttttggacccctatct 20436086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 23000822 - 23000794
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23000822 ggcttaattgcacttttggacccctatct 23000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 24895224 - 24895196
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  24895224 ggcttaattgcacttttggacccctatct 24895196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 25429922 - 25429950
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25429922 ggcttaattgcacttttggacccctatct 25429950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 25430083 - 25430055
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25430083 ggcttaattgcacttttggacccctatct 25430055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 25888204 - 25888176
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25888204 ggcttaattgcacttttggacccctatct 25888176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 26717158 - 26717186
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26717158 ggcttaattgcacttttggacccctatct 26717186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 30219019 - 30218991
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30219019 ggcttaattgcacttttggacccctatct 30218991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 31784252 - 31784280
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31784252 ggcttaattgcacttttggacccctatct 31784280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 33004709 - 33004737
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  33004709 ggcttaattgcacttttggacccctatct 33004737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 418
Target Start/End: Complemental strand, 38293961 - 38293869
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaatttt-gagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    |||||||||||||| | |||  | ||||||| || |||| ||||||||| ||||||| ||||||||||  ||||| || ||||| ||||||||    
T  38293961 tcatataaaccctccataacctccaaaaaccctcccccaatacaatttttgagttccccaaatgagggagattttttattatgagtaaaaaat 38293869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 40445866 - 40445838
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  40445866 ggcttaattgcacttttggacccctatct 40445838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 45127149 - 45127121
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45127149 ggcttaattgcacttttggacccctatct 45127121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 447
Target Start/End: Complemental strand, 6261704 - 6261662
Alignment:
Q  405 tatgaataaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  6261704 tatgaataaaaataggcttaattgcacttttggacccctatct 6261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 10893882 - 10893917
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  10893882 aaaaaaaggcttaattgcacttttggacccctatct 10893917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 13042728 - 13042693
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||||    
T  13042728 aaaatatggcttaattgcacttttggacccctatct 13042693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 31740762 - 31740797
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  31740762 aaaaaaaggcttaattgcacttttggacccctatct 31740797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 31833586 - 31833551
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  31833586 aaaaaaaggcttaattgcacttttggacccctatct 31833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Original strand, 6261379 - 6261409
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  6261379 atggcttaattgcacttttggacccctatct 6261409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 11746294 - 11746264
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  11746294 atggcttaattgcacttttggacccctatct 11746264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 1814975 - 1815004
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  1814975 tggcttaattgcacttttggacccctatct 1815004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 10977657 - 10977686
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  10977657 tggcttaattgcacttttggacccctatct 10977686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 23883402 - 23883373
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  23883402 tggcttaattgcacttttggacccctatct 23883373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 28930778 - 28930749
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  28930778 tggcttaattgcacttttggacccctatct 28930749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 34705690 - 34705661
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  34705690 tggcttaattgcacttttggacccctatct 34705661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 1815289 - 1815261
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  1815289 ggcttaattgcacttttggacccctatct 1815261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 1896898 - 1896926
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  1896898 ggcttaattgcacttttggacccctatct 1896926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 2100694 - 2100666
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2100694 ggcttaattgcacttttggacccctatct 2100666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 2565078 - 2565106
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2565078 ggcttaattgcacttttggacccctatct 2565106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 2565392 - 2565364
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2565392 ggcttaattgcacttttggacccctatct 2565364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 4405554 - 4405526
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  4405554 ggcttaattgcacttttggacccctatct 4405526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 7391485 - 7391513
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  7391485 ggcttaattgcacttttggacccctatct 7391513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 9126688 - 9126660
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  9126688 ggcttaattgcacttttggacccctatct 9126660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11213496 - 11213468
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11213496 ggcttaattgcacttttggacccctatct 11213468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11322338 - 11322310
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11322338 ggcttaattgcacttttggacccctatct 11322310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11614898 - 11614926
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11614898 ggcttaattgcacttttggacccctatct 11614926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 11745998 - 11746026
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11745998 ggcttaattgcacttttggacccctatct 11746026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 13042408 - 13042436
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  13042408 ggcttaattgcacttttggacccctatct 13042436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 14997322 - 14997294
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  14997322 ggcttaattgcacttttggacccctatct 14997294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 15272998 - 15273026
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  15272998 ggcttaattgcacttttggacccctatct 15273026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 16765350 - 16765322
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  16765350 ggcttaattgcacttttggacccctatct 16765322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 20080118 - 20080146
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20080118 ggcttaattgcacttttggacccctatct 20080146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 23291256 - 23291284
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23291256 ggcttaattgcacttttggacccctatct 23291284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 23585291 - 23585263
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23585291 ggcttaattgcacttttggacccctatct 23585263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 25749955 - 25749983
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25749955 ggcttaattgcacttttggacccctatct 25749983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 26171520 - 26171492
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26171520 ggcttaattgcacttttggacccctatct 26171492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 26716684 - 26716656
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26716684 ggcttaattgcacttttggacccctatct 26716656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 27223622 - 27223594
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27223622 ggcttaattgcacttttggacccctatct 27223594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 29697156 - 29697128
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  29697156 ggcttaattgcacttttggacccctatct 29697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 30965691 - 30965719
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30965691 ggcttaattgcacttttggacccctatct 30965719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 31951514 - 31951486
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31951514 ggcttaattgcacttttggacccctatct 31951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 7666191 - 7666228
Alignment:
Q  410 ataaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||||| |||||||||||||||||||||||||||||    
T  7666191 ataaaaaaaggcttaattgcacttttggacccctatct 7666228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 447
Target Start/End: Complemental strand, 11159736 - 11159705
Alignment:
Q  416 aatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||||    
T  11159736 aatggcttaattgcacttttggacccctatct 11159705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 14578427 - 14578466
Alignment:
Q  409 aataaaaaat-ggcttaattgcacttttggacccctatct 447  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14578427 aataaaaaataggcttaattgcacttttggacccctatct 14578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 447
Target Start/End: Original strand, 21536877 - 21536908
Alignment:
Q  416 aatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||||    
T  21536877 aatggcttaattgcacttttggacccctatct 21536908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 51696529 - 51696564
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  51696529 aaaaaaaggcttaattgcacttttggacccctatct 51696564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 18988495 - 18988465
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  18988495 atggcttaattgcacttttggacccctatct 18988465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 39946400 - 39946362
Alignment:
Q  409 aataaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  39946400 aataaaagatggcttaattgcacttttggacccttatct 39946362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 7666512 - 7666483
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  7666512 tggcttaattgcacttttggacccctatct 7666483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 10045955 - 10045984
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  10045955 tggcttaattgcacttttggacccctatct 10045984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 11529754 - 11529787
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  11529754 aaaaaggcttaattgcacttttggacccctatct 11529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 13019272 - 13019301
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  13019272 tggcttaattgcacttttggacccctatct 13019301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 17262399 - 17262370
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  17262399 tggcttaattgcacttttggacccctatct 17262370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 17266061 - 17266032
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  17266061 tggcttaattgcacttttggacccctatct 17266032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 24415396 - 24415359
Alignment:
Q  411 taaaaaat-ggcttaattgcacttttggacccctatct 447  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24415396 taaaaaataggcttaattgcacttttggacccctatct 24415359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 27247173 - 27247144
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  27247173 tggcttaattgcacttttggacccctatct 27247144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 34363132 - 34363103
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  34363132 tggcttaattgcacttttggacccctatct 34363103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 35364195 - 35364224
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  35364195 tggcttaattgcacttttggacccctatct 35364224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 41205814 - 41205781
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  41205814 aaaaaggcttaattgcacttttggacccctatct 41205781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 43821718 - 43821747
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  43821718 tggcttaattgcacttttggacccctatct 43821747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 52046034 - 52046001
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  52046034 aaaaaggcttaattgcacttttggacccctatct 52046001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 104200 - 104228
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  104200 ggcttaattgcacttttggacccctatct 104228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 233004 - 232976
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  233004 ggcttaattgcacttttggacccctatct 232976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 3770179 - 3770207
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  3770179 ggcttaattgcacttttggacccctatct 3770207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 4902136 - 4902164
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  4902136 ggcttaattgcacttttggacccctatct 4902164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 4902469 - 4902441
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  4902469 ggcttaattgcacttttggacccctatct 4902441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 5344270 - 5344298
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  5344270 ggcttaattgcacttttggacccctatct 5344298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 6386731 - 6386759
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  6386731 ggcttaattgcacttttggacccctatct 6386759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 7396141 - 7396169
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  7396141 ggcttaattgcacttttggacccctatct 7396169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 7644457 - 7644485
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  7644457 ggcttaattgcacttttggacccctatct 7644485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 7705590 - 7705618
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  7705590 ggcttaattgcacttttggacccctatct 7705618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 9592452 - 9592416
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||| |||||||||    
T  9592452 taaataatggcttaattgcacttttggccccctatct 9592416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 10046249 - 10046221
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  10046249 ggcttaattgcacttttggacccctatct 10046221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 11530073 - 11530045
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  11530073 ggcttaattgcacttttggacccctatct 11530045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 12640820 - 12640848
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  12640820 ggcttaattgcacttttggacccctatct 12640848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 12641132 - 12641104
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  12641132 ggcttaattgcacttttggacccctatct 12641104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 13021292 - 13021264
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  13021292 ggcttaattgcacttttggacccctatct 13021264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 14578753 - 14578725
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  14578753 ggcttaattgcacttttggacccctatct 14578725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 17554033 - 17554073
Alignment:
Q  407 tgaataaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||| || ||||||||||||||||||||||||||    
T  17554033 tgaaaaaaaaaaggtttaattgcacttttggacccctatct 17554073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 17554359 - 17554331
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  17554359 ggcttaattgcacttttggacccctatct 17554331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 18988179 - 18988207
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  18988179 ggcttaattgcacttttggacccctatct 18988207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 21537190 - 21537162
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  21537190 ggcttaattgcacttttggacccctatct 21537162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 23315691 - 23315663
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23315691 ggcttaattgcacttttggacccctatct 23315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 24415073 - 24415101
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  24415073 ggcttaattgcacttttggacccctatct 24415101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 24542754 - 24542782
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  24542754 ggcttaattgcacttttggacccctatct 24542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27246859 - 27246887
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27246859 ggcttaattgcacttttggacccctatct 27246887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 29548493 - 29548465
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  29548493 ggcttaattgcacttttggacccctatct 29548465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 31250782 - 31250754
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31250782 ggcttaattgcacttttggacccctatct 31250754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 33338343 - 33338315
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  33338343 ggcttaattgcacttttggacccctatct 33338315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 34362820 - 34362848
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  34362820 ggcttaattgcacttttggacccctatct 34362848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 35835776 - 35835804
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  35835776 ggcttaattgcacttttggacccctatct 35835804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 37289455 - 37289483
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  37289455 ggcttaattgcacttttggacccctatct 37289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 38371271 - 38371299
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38371271 ggcttaattgcacttttggacccctatct 38371299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 39136298 - 39136326
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  39136298 ggcttaattgcacttttggacccctatct 39136326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 39136610 - 39136582
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  39136610 ggcttaattgcacttttggacccctatct 39136582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 41205498 - 41205526
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  41205498 ggcttaattgcacttttggacccctatct 41205526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 41787049 - 41787077
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  41787049 ggcttaattgcacttttggacccctatct 41787077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 42672381 - 42672353
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42672381 ggcttaattgcacttttggacccctatct 42672353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 43822011 - 43821983
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  43822011 ggcttaattgcacttttggacccctatct 43821983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 44921923 - 44921895
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  44921923 ggcttaattgcacttttggacccctatct 44921895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 45289813 - 45289785
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45289813 ggcttaattgcacttttggacccctatct 45289785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 47821475 - 47821503
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47821475 ggcttaattgcacttttggacccctatct 47821503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 47853976 - 47854004
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47853976 ggcttaattgcacttttggacccctatct 47854004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 51537430 - 51537458
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  51537430 ggcttaattgcacttttggacccctatct 51537458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 52045721 - 52045749
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  52045721 ggcttaattgcacttttggacccctatct 52045749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 52310801 - 52310829
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  52310801 ggcttaattgcacttttggacccctatct 52310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 52311115 - 52311087
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  52311115 ggcttaattgcacttttggacccctatct 52311087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 54215956 - 54215984
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  54215956 ggcttaattgcacttttggacccctatct 54215984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 55586930 - 55586902
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  55586930 ggcttaattgcacttttggacccctatct 55586902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 5914 - 5878
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| |||||||||||||||||||||||||||||    
T  5914 taaaaaaaggcttaattgcacttttggacccctatct 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 5592 - 5620
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  5592 ggcttaattgcacttttggacccctatct 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 4167521 - 4167485
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4167521 taaaaattggcttaattgcacttttggacccctatct 4167485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 18553292 - 18553256
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||| ||||||||||||||||    
T  18553292 taaaaaatggcttaattgcaattttggacccctatct 18553256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 6745314 - 6745279
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  6745314 aaaaaaaggcttaattgcacttttggacccctatct 6745279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 32332133 - 32332168
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  32332133 aaaaaaaggcttaattgcacttttggacccctatct 32332168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 37205861 - 37205826
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  37205861 aaaaaaaggcttaattgcacttttggacccctatct 37205826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 45209296 - 45209261
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  45209296 aaaaaaaggcttaattgcacttttggacccctatct 45209261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 5734500 - 5734470
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  5734500 atggcttaattgcacttttggacccctatct 5734470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 6839837 - 6839883
Alignment:
Q  372 ttttgagttcctcaaatgaggggaattttgtactatgaataaaaaat 418  Q
    ||||| || |||||||||||||||||||| || ||||||||||||||    
T  6839837 ttttgtgtccctcaaatgaggggaattttatattatgaataaaaaat 6839883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 7318950 - 7318920
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  7318950 atggcttaattgcacttttggacccctatct 7318920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 39626283 - 39626253
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  39626283 atggcttaattgcacttttggacccctatct 39626253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 39635833 - 39635803
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  39635833 atggcttaattgcacttttggacccctatct 39635803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 414666 - 414695
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  414666 tggcttaattgcacttttggacccctatct 414695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 2321831 - 2321802
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  2321831 tggcttaattgcacttttggacccctatct 2321802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 4107162 - 4107133
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  4107162 tggcttaattgcacttttggacccctatct 4107133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 6641912 - 6641883
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  6641912 tggcttaattgcacttttggacccctatct 6641883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 7151156 - 7151127
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  7151156 tggcttaattgcacttttggacccctatct 7151127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 18531147 - 18531118
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  18531147 tggcttaattgcacttttggacccctatct 18531118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 20096001 - 20095972
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  20096001 tggcttaattgcacttttggacccctatct 20095972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 20283989 - 20283960
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  20283989 tggcttaattgcacttttggacccctatct 20283960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 20814055 - 20814026
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  20814055 tggcttaattgcacttttggacccctatct 20814026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 21070617 - 21070588
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  21070617 tggcttaattgcacttttggacccctatct 21070588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 23233780 - 23233809
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  23233780 tggcttaattgcacttttggacccctatct 23233809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 31190642 - 31190671
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  31190642 tggcttaattgcacttttggacccctatct 31190671  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 39515557 - 39515586
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  39515557 tggcttaattgcacttttggacccctatct 39515586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 40918688 - 40918659
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  40918688 tggcttaattgcacttttggacccctatct 40918659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 414968 - 414940
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  414968 ggcttaattgcacttttggacccctatct 414940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 1657698 - 1657670
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  1657698 ggcttaattgcacttttggacccctatct 1657670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 2321516 - 2321544
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2321516 ggcttaattgcacttttggacccctatct 2321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 6014419 - 6014447
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  6014419 ggcttaattgcacttttggacccctatct 6014447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 6107117 - 6107145
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  6107117 ggcttaattgcacttttggacccctatct 6107145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 6335641 - 6335613
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  6335641 ggcttaattgcacttttggacccctatct 6335613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 8870259 - 8870287
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  8870259 ggcttaattgcacttttggacccctatct 8870287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 14032036 - 14032064
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  14032036 ggcttaattgcacttttggacccctatct 14032064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 15187928 - 15187956
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  15187928 ggcttaattgcacttttggacccctatct 15187956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 17943358 - 17943386
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  17943358 ggcttaattgcacttttggacccctatct 17943386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 20056407 - 20056439
Alignment:
Q  415 aaatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||| |||||    
T  20056407 aaatggcttaattgcacttttggacccttatct 20056439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 20095686 - 20095714
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20095686 ggcttaattgcacttttggacccctatct 20095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 23234093 - 23234065
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  23234093 ggcttaattgcacttttggacccctatct 23234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27339543 - 27339571
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27339543 ggcttaattgcacttttggacccctatct 27339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27822875 - 27822903
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27822875 ggcttaattgcacttttggacccctatct 27822903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 30359155 - 30359127
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30359155 ggcttaattgcacttttggacccctatct 30359127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 30845873 - 30845845
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  30845873 ggcttaattgcacttttggacccctatct 30845845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 32318819 - 32318791
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  32318819 ggcttaattgcacttttggacccctatct 32318791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 36226728 - 36226700
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  36226728 ggcttaattgcacttttggacccctatct 36226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 36801677 - 36801649
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  36801677 ggcttaattgcacttttggacccctatct 36801649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 37639507 - 37639535
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  37639507 ggcttaattgcacttttggacccctatct 37639535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 37953374 - 37953402
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  37953374 ggcttaattgcacttttggacccctatct 37953402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 38593187 - 38593215
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38593187 ggcttaattgcacttttggacccctatct 38593215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 39616864 - 39616836
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  39616864 ggcttaattgcacttttggacccctatct 39616836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 42267456 - 42267484
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42267456 ggcttaattgcacttttggacccctatct 42267484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 42267771 - 42267743
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42267771 ggcttaattgcacttttggacccctatct 42267743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 42642401 - 42642373
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42642401 ggcttaattgcacttttggacccctatct 42642373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 42866406 - 42866378
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42866406 ggcttaattgcacttttggacccctatct 42866378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 42906687 - 42906659
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42906687 ggcttaattgcacttttggacccctatct 42906659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 416
Target Start/End: Original strand, 43733128 - 43733219
Alignment:
Q  327 tcatataaaccctctaaaactcctaaaaaccttctcccactacaattttg--agttcctcaaatgaggggaattttgtactatgaataaaaa 416  Q
    ||||||||| |||| |||||||| ||||||| ||  ||| |||||||||   | | |||||||||||| | |||||||| ||||||||||||    
T  43733128 tcatataaatcctccaaaactcccaaaaaccctcctccaatacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaa 43733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 45106435 - 45106463
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45106435 ggcttaattgcacttttggacccctatct 45106463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 7714 - 7749
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  7714 aaaaaaaggcttaattgcacttttggacccctatct 7749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 238948 - 238909
Alignment:
Q  409 aataaaaaat-ggcttaattgcacttttggacccctatct 447  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  238948 aataaaaaataggcttaattgcacttttggacccctatct 238909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 238622 - 238650
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  238622 ggcttaattgcacttttggacccctatct 238650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 447
Target Start/End: Original strand, 22202481 - 22202512
Alignment:
Q  416 aatggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||||    
T  22202481 aatggcttaattgcacttttggacccctatct 22202512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 33576729 - 33576694
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  33576729 aaaaaaaggcttaattgcacttttggacccctatct 33576694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 37181997 - 37182032
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctatct 447  Q
    |||||| |||||||||||||||||||||||||||||    
T  37181997 aaaaaaaggcttaattgcacttttggacccctatct 37182032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 44895638 - 44895677
Alignment:
Q  409 aataaaaaat-ggcttaattgcacttttggacccctatct 447  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  44895638 aataaaaaataggcttaattgcacttttggacccctatct 44895677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Original strand, 32507919 - 32507953
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctat 445  Q
    ||||||| |||||||||||||||||||||||||||    
T  32507919 taaaaaaaggcttaattgcacttttggacccctat 32507953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 447
Target Start/End: Original strand, 53192108 - 53192142
Alignment:
Q  413 aaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||| |||||||||||||||||||||||||||||    
T  53192108 aaaaaaggcttaattgcacttttggacccctatct 53192142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Original strand, 54717160 - 54717190
Alignment:
Q  414 aaaatggcttaattgcacttttggaccccta 444  Q
    |||||||||||||||||||||||||||||||    
T  54717160 aaaatggcttaattgcacttttggaccccta 54717190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 2119028 - 2118999
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  2119028 tggcttaattgcacttttggacccctatct 2118999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 3212466 - 3212437
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  3212466 tggcttaattgcacttttggacccctatct 3212437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 5577247 - 5577218
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  5577247 tggcttaattgcacttttggacccctatct 5577218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 17483560 - 17483589
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  17483560 tggcttaattgcacttttggacccctatct 17483589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 17483872 - 17483843
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  17483872 tggcttaattgcacttttggacccctatct 17483843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 20982279 - 20982308
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  20982279 tggcttaattgcacttttggacccctatct 20982308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 25053898 - 25053869
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  25053898 tggcttaattgcacttttggacccctatct 25053869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 27857449 - 27857420
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  27857449 tggcttaattgcacttttggacccctatct 27857420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 27984138 - 27984167
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  27984138 tggcttaattgcacttttggacccctatct 27984167  T

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Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 40082508 - 40082475
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  40082508 aaaaaggcttaattgcacttttggacccctatct 40082475  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 41282161 - 41282132
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  41282161 tggcttaattgcacttttggacccctatct 41282132  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 44184285 - 44184256
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  44184285 tggcttaattgcacttttggacccctatct 44184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 45760547 - 45760518
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  45760547 tggcttaattgcacttttggacccctatct 45760518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 47530338 - 47530367
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  47530338 tggcttaattgcacttttggacccctatct 47530367  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 51213306 - 51213335
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  51213306 tggcttaattgcacttttggacccctatct 51213335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 53192427 - 53192398
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  53192427 tggcttaattgcacttttggacccctatct 53192398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 257749 - 257721
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  257749 ggcttaattgcacttttggacccctatct 257721  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 2239543 - 2239515
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2239543 ggcttaattgcacttttggacccctatct 2239515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 2711701 - 2711729
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  2711701 ggcttaattgcacttttggacccctatct 2711729  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 8313949 - 8313977
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  8313949 ggcttaattgcacttttggacccctatct 8313977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 9153477 - 9153505
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  9153477 ggcttaattgcacttttggacccctatct 9153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 10864115 - 10864143
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  10864115 ggcttaattgcacttttggacccctatct 10864143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 10864432 - 10864404
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  10864432 ggcttaattgcacttttggacccctatct 10864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 12881235 - 12881263
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  12881235 ggcttaattgcacttttggacccctatct 12881263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 12881528 - 12881500
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  12881528 ggcttaattgcacttttggacccctatct 12881500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 14904442 - 14904470
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  14904442 ggcttaattgcacttttggacccctatct 14904470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 17916396 - 17916368
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  17916396 ggcttaattgcacttttggacccctatct 17916368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 19391638 - 19391666
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  19391638 ggcttaattgcacttttggacccctatct 19391666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 19392016 - 19391988
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  19392016 ggcttaattgcacttttggacccctatct 19391988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 19914476 - 19914504
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  19914476 ggcttaattgcacttttggacccctatct 19914504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 19914785 - 19914757
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  19914785 ggcttaattgcacttttggacccctatct 19914757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 20982572 - 20982544
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20982572 ggcttaattgcacttttggacccctatct 20982544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 21841727 - 21841755
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  21841727 ggcttaattgcacttttggacccctatct 21841755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 25126311 - 25126283
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  25126311 ggcttaattgcacttttggacccctatct 25126283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 26494685 - 26494713
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  26494685 ggcttaattgcacttttggacccctatct 26494713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27748244 - 27748272
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27748244 ggcttaattgcacttttggacccctatct 27748272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 27748556 - 27748528
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27748556 ggcttaattgcacttttggacccctatct 27748528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 27766518 - 27766546
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27766518 ggcttaattgcacttttggacccctatct 27766546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 27766830 - 27766802
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  27766830 ggcttaattgcacttttggacccctatct 27766802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 28097745 - 28097709
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  28097745 taaaaaaaggcttaattccacttttggacccctatct 28097709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 28964153 - 28964181
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  28964153 ggcttaattgcacttttggacccctatct 28964181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 28964467 - 28964439
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  28964467 ggcttaattgcacttttggacccctatct 28964439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 31117620 - 31117648
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  31117620 ggcttaattgcacttttggacccctatct 31117648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 415 - 447
Target Start/End: Complemental strand, 31869512 - 31869480
Alignment:
Q  415 aaatggcttaattgcacttttggacccctatct 447  Q
    |||| ||||||||||||||||||||||||||||    
T  31869512 aaatagcttaattgcacttttggacccctatct 31869480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 32205160 - 32205132
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  32205160 ggcttaattgcacttttggacccctatct 32205132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 33621866 - 33621894
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  33621866 ggcttaattgcacttttggacccctatct 33621894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 38511970 - 38511942
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  38511970 ggcttaattgcacttttggacccctatct 38511942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 41223513 - 41223541
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  41223513 ggcttaattgcacttttggacccctatct 41223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 41281845 - 41281873
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  41281845 ggcttaattgcacttttggacccctatct 41281873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 42230344 - 42230316
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42230344 ggcttaattgcacttttggacccctatct 42230316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 42465691 - 42465719
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  42465691 ggcttaattgcacttttggacccctatct 42465719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 44177288 - 44177316
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  44177288 ggcttaattgcacttttggacccctatct 44177316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 44183972 - 44184000
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  44183972 ggcttaattgcacttttggacccctatct 44184000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 44624539 - 44624511
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  44624539 ggcttaattgcacttttggacccctatct 44624511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 44895961 - 44895933
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  44895961 ggcttaattgcacttttggacccctatct 44895933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 45743899 - 45743927
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  45743899 ggcttaattgcacttttggacccctatct 45743927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 47423441 - 47423413
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47423441 ggcttaattgcacttttggacccctatct 47423413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 47530653 - 47530625
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47530653 ggcttaattgcacttttggacccctatct 47530625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 47943773 - 47943745
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  47943773 ggcttaattgcacttttggacccctatct 47943745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 50033554 - 50033526
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  50033554 ggcttaattgcacttttggacccctatct 50033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 52916859 - 52916887
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  52916859 ggcttaattgcacttttggacccctatct 52916887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 53531806 - 53531834
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  53531806 ggcttaattgcacttttggacccctatct 53531834  T

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Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 53532119 - 53532091
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  53532119 ggcttaattgcacttttggacccctatct 53532091  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 447
Target Start/End: Complemental strand, 16069 - 16039
Alignment:
Q  417 atggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||||    
T  16069 atggcttaattgcacttttggacccctatct 16039  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 447
Target Start/End: Complemental strand, 401025 - 400991
Alignment:
Q  413 aaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||| |||||||||||||||||||||||||||||    
T  401025 aaaaaaggcttaattgcacttttggacccctatct 400991  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 400704 - 400732
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  400704 ggcttaattgcacttttggacccctatct 400732  T

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Target: scaffold0213 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 21361 - 21332
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  21361 tggcttaattgcacttttggacccctatct 21332  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 22294 - 22323
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  22294 tggcttaattgcacttttggacccctatct 22323  T

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Target: scaffold0121; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Complemental strand, 22590 - 22561
Alignment:
Q  418 tggcttaattgcacttttggacccctatct 447  Q
    ||||||||||||||||||||||||||||||    
T  22590 tggcttaattgcacttttggacccctatct 22561  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 26181 - 26218
Alignment:
Q  408 gaataaaaaat-ggcttaattgcacttttggaccccta 444  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26181 gaataaaaaataggcttaattgcacttttggaccccta 26218  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 75103 - 75136
Alignment:
Q  412 aaaaaatggcttaattgcacttttggacccctat 445  Q
    |||||| |||||||||||||||||||||||||||    
T  75103 aaaaaaaggcttaattgcacttttggacccctat 75136  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 12976 - 12943
Alignment:
Q  414 aaaatggcttaattgcacttttggacccctatct 447  Q
    |||| |||||||||||||||||||||||||||||    
T  12976 aaaaaggcttaattgcacttttggacccctatct 12943  T

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Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 78990 - 79018
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  78990 ggcttaattgcacttttggacccctatct 79018  T

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Target: scaffold0014; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 79300 - 79272
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  79300 ggcttaattgcacttttggacccctatct 79272  T

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Target: scaffold1171 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1171
Description:

Target: scaffold1171; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 819 - 847
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  819 ggcttaattgcacttttggacccctatct 847  T

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Target: scaffold0922 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 146 - 118
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  146 ggcttaattgcacttttggacccctatct 118  T

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Target: scaffold0777 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 183 - 155
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  183 ggcttaattgcacttttggacccctatct 155  T

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Target: scaffold0693 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 4834 - 4806
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  4834 ggcttaattgcacttttggacccctatct 4806  T

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Target: scaffold0606 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 6868 - 6896
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  6868 ggcttaattgcacttttggacccctatct 6896  T

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Target: scaffold0370 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 10941 - 10913
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  10941 ggcttaattgcacttttggacccctatct 10913  T

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Target: scaffold0370; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 16231 - 16203
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  16231 ggcttaattgcacttttggacccctatct 16203  T

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Target: scaffold0272 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 10559 - 10587
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  10559 ggcttaattgcacttttggacccctatct 10587  T

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Target: scaffold0250 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 21831 - 21863
Alignment:
Q  412 aaaaaatggcttaattgcacttttggaccccta 444  Q
    |||||| ||||||||||||||||||||||||||    
T  21831 aaaaaaaggcttaattgcacttttggaccccta 21863  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 20595 - 20623
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  20595 ggcttaattgcacttttggacccctatct 20623  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 29650 - 29678
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  29650 ggcttaattgcacttttggacccctatct 29678  T

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Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 29964 - 29936
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  29964 ggcttaattgcacttttggacccctatct 29936  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 20947 - 20911
Alignment:
Q  411 taaaaaatggcttaattgcacttttggacccctatct 447  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  20947 taaaaaaaggcttaattgcacttttggacccttatct 20911  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 447
Target Start/End: Complemental strand, 81615 - 81587
Alignment:
Q  419 ggcttaattgcacttttggacccctatct 447  Q
    |||||||||||||||||||||||||||||    
T  81615 ggcttaattgcacttttggacccctatct 81587  T

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