View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3545_low_59 (Length: 250)
Name: NF3545_low_59
Description: NF3545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3545_low_59 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 10581884 - 10581650
Alignment:
| Q |
1 |
ctttgagatacacatacttactttacatgtataaagcttattttgaatcacttatcatgagcctggttctagtcaagtgaagatatctattagaaaacca |
100 |
Q |
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| T |
10581884 |
ctttgagatacacatacttactttacatgtataaagcttaatttgaatcacttatcatgagcctggttctagtcaagtgaagatatctattagaaaacca |
10581785 |
T |
|
| Q |
101 |
gttcaattaattgtatggttagaagccagtattagtccctttcttttagaggttactaatatggaaactttatattgcagagatttttgaatcaatgtca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10581784 |
gttcaattaattgtatggttagaagccagtattagtccctttcttttagaggttactaatatggaaactttatattgcagagatttttgaatcaatgtca |
10581685 |
T |
|
| Q |
201 |
gagaaatggggccatgttgatgttggtattctagt |
235 |
Q |
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||||||||||||||||||||||| ||||||||||| |
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| T |
10581684 |
gagaaatggggccatgttgatgtaggtattctagt |
10581650 |
T |
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