View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3545_low_8 (Length: 595)

Name: NF3545_low_8
Description: NF3545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3545_low_8
NF3545_low_8
[»] chr3 (77 HSPs)
chr3 (173-586)||(42770659-42771073)
chr3 (32-158)||(37408034-37408160)
chr3 (20-156)||(37726163-37726299)
chr3 (20-156)||(26928080-26928216)
chr3 (20-156)||(33386137-33386273)
chr3 (31-158)||(23198405-23198532)
chr3 (31-158)||(23200604-23200731)
chr3 (31-157)||(7782587-7782713)
chr3 (20-156)||(27453445-27453581)
chr3 (20-158)||(1306468-1306606)
chr3 (32-156)||(800685-800809)
chr3 (20-147)||(40372264-40372391)
chr3 (20-147)||(8477867-8477994)
chr3 (20-147)||(22172670-22172797)
chr3 (20-147)||(7167747-7167874)
chr3 (96-156)||(27974433-27974493)
chr3 (79-147)||(28501160-28501228)
chr3 (79-147)||(28503327-28503395)
chr3 (32-143)||(54634722-54634833)
chr3 (31-143)||(4598983-4599095)
chr3 (31-143)||(4601204-4601316)
chr3 (66-147)||(18656940-18657021)
chr3 (32-93)||(27974477-27974538)
chr3 (32-139)||(6716101-6716208)
chr3 (81-158)||(2676572-2676649)
chr3 (31-143)||(3617046-3617158)
chr3 (79-148)||(10055812-10055881)
chr3 (79-148)||(10058034-10058103)
chr3 (79-148)||(10060256-10060325)
chr3 (79-148)||(10062478-10062547)
chr3 (79-148)||(10064700-10064769)
chr3 (79-148)||(10066922-10066991)
chr3 (78-147)||(36029639-36029708)
chr3 (98-158)||(39032015-39032075)
chr3 (81-156)||(2672418-2672493)
chr3 (29-143)||(10208790-10208904)
chr3 (29-139)||(10210994-10211104)
chr3 (30-147)||(24694656-24694775)
chr3 (98-156)||(21711768-21711826)
chr3 (54-144)||(27352092-27352182)
chr3 (79-156)||(27038589-27038666)
chr3 (20-93)||(27986001-27986074)
chr3 (98-147)||(30709267-30709316)
chr3 (81-158)||(32475997-32476074)
chr3 (79-139)||(25637029-25637089)
chr3 (96-156)||(32143868-32143928)
chr3 (81-161)||(32480855-32480935)
chr3 (98-156)||(27027273-27027331)
chr3 (98-147)||(16264896-16264945)
chr3 (20-93)||(32143811-32143884)
chr3 (98-143)||(40734087-40734132)
chr3 (96-156)||(27985957-27986017)
chr3 (105-147)||(1730917-1730959)
chr3 (98-147)||(8738550-8738599)
chr3 (98-147)||(9090788-9090837)
chr3 (98-147)||(35926057-35926105)
chr3 (98-147)||(40592253-40592302)
chr3 (435-543)||(42770110-42770219)
chr3 (98-147)||(48438782-48438831)
chr3 (97-156)||(40845220-40845279)
chr3 (20-109)||(2671111-2671200)
chr3 (98-143)||(6718300-6718345)
chr3 (98-147)||(16498645-16498694)
chr3 (98-143)||(40735018-40735063)
chr3 (98-143)||(45282597-45282642)
chr3 (33-121)||(49200137-49200226)
chr3 (104-147)||(47923328-47923371)
chr3 (98-156)||(8127197-8127255)
chr3 (81-143)||(8512753-8512815)
chr3 (81-143)||(24968630-24968692)
chr3 (428-465)||(42772977-42773014)
chr3 (98-135)||(43404486-43404523)
chr3 (494-576)||(42772323-42772409)
chr3 (409-464)||(42772425-42772480)
chr3 (81-143)||(8517633-8517695)
chr3 (20-119)||(3393219-3393319)
chr3 (79-119)||(9634816-9634856)
[»] chr7 (47 HSPs)
chr7 (19-156)||(2479823-2479960)
chr7 (20-156)||(47264131-47264267)
chr7 (30-156)||(44847619-44847745)
chr7 (20-156)||(39730933-39731069)
chr7 (20-156)||(48408398-48408534)
chr7 (33-156)||(21646520-21646643)
chr7 (27-158)||(21983738-21983869)
chr7 (27-156)||(21989402-21989531)
chr7 (33-156)||(43504598-43504721)
chr7 (44-158)||(18409287-18409401)
chr7 (20-156)||(18414139-18414275)
chr7 (20-156)||(24789426-24789562)
chr7 (20-147)||(2058470-2058596)
chr7 (20-147)||(20357036-20357163)
chr7 (20-147)||(21640288-21640415)
chr7 (20-156)||(25767410-25767540)
chr7 (79-158)||(31109068-31109146)
chr7 (77-157)||(1532883-1532963)
chr7 (79-147)||(4873645-4873713)
chr7 (79-147)||(12406781-12406849)
chr7 (31-143)||(6592797-6592909)
chr7 (31-143)||(32060764-32060876)
chr7 (79-147)||(12397416-12397484)
chr7 (20-149)||(21811745-21811874)
chr7 (31-143)||(6595013-6595125)
chr7 (79-144)||(24023830-24023895)
chr7 (79-143)||(1562511-1562575)
chr7 (80-143)||(18392705-18392768)
chr7 (63-143)||(20343512-20343592)
chr7 (81-147)||(24260829-24260895)
chr7 (98-147)||(79955-80004)
chr7 (81-143)||(16880586-16880648)
chr7 (81-143)||(16885441-16885503)
chr7 (20-112)||(1532947-1533039)
chr7 (98-147)||(46515810-46515860)
chr7 (97-142)||(49092237-49092282)
chr7 (81-143)||(24265689-24265751)
chr7 (29-113)||(14070298-14070382)
chr7 (29-113)||(14380326-14380410)
chr7 (99-143)||(18390506-18390550)
chr7 (78-113)||(4509334-4509369)
chr7 (78-113)||(4511176-4511211)
chr7 (78-113)||(6431467-6431502)
chr7 (30-113)||(48491219-48491302)
chr7 (20-93)||(4178413-4178487)
chr7 (98-147)||(2647180-2647228)
chr7 (29-121)||(26416925-26417017)
[»] chr8 (37 HSPs)
chr8 (20-156)||(7412816-7412952)
chr8 (20-156)||(2627318-2627454)
chr8 (20-156)||(1261414-1261550)
chr8 (44-156)||(26288405-26288517)
chr8 (44-156)||(26301662-26301774)
chr8 (44-156)||(26313656-26313768)
chr8 (32-156)||(31042908-31043032)
chr8 (33-147)||(36979892-36980006)
chr8 (20-147)||(4759542-4759669)
chr8 (20-147)||(10683747-10683874)
chr8 (20-147)||(18870029-18870156)
chr8 (20-147)||(30656147-30656274)
chr8 (20-147)||(33037295-33037422)
chr8 (31-143)||(3439100-3439212)
chr8 (20-147)||(6311800-6311927)
chr8 (20-147)||(18852635-18852762)
chr8 (80-156)||(39784325-39784400)
chr8 (79-143)||(7289439-7289503)
chr8 (79-147)||(25327672-25327740)
chr8 (79-143)||(42575833-42575897)
chr8 (98-147)||(5701960-5702009)
chr8 (79-143)||(15290155-15290219)
chr8 (79-143)||(15470524-15470588)
chr8 (81-157)||(35745904-35745980)
chr8 (98-148)||(4456575-4456625)
chr8 (98-147)||(10688626-10688675)
chr8 (98-143)||(25689573-25689618)
chr8 (97-148)||(19175232-19175283)
chr8 (30-119)||(19948766-19948856)
chr8 (98-147)||(23799100-23799149)
chr8 (30-119)||(17982286-17982376)
chr8 (20-93)||(31217895-31217969)
chr8 (29-138)||(42435673-42435782)
chr8 (29-93)||(43036062-43036127)
chr8 (20-119)||(1746674-1746773)
chr8 (78-113)||(11383406-11383441)
chr8 (30-93)||(19945805-19945869)
[»] chr5 (51 HSPs)
chr5 (20-156)||(9352807-9352943)
chr5 (30-162)||(36931837-36931969)
chr5 (20-156)||(16407641-16407777)
chr5 (30-156)||(15464999-15465125)
chr5 (20-158)||(16409075-16409213)
chr5 (33-158)||(26177464-26177589)
chr5 (32-157)||(9789685-9789810)
chr5 (32-157)||(18442109-18442234)
chr5 (33-148)||(26170365-26170480)
chr5 (32-157)||(29752266-29752391)
chr5 (20-156)||(24136348-24136484)
chr5 (32-156)||(29719965-29720089)
chr5 (20-147)||(30631813-30631940)
chr5 (20-147)||(15045145-15045271)
chr5 (20-147)||(27450274-27450401)
chr5 (32-158)||(29722150-29722276)
chr5 (79-147)||(1456646-1456714)
chr5 (20-147)||(27445431-27445558)
chr5 (32-157)||(29751600-29751725)
chr5 (79-147)||(29402558-29402626)
chr5 (79-147)||(43599242-43599310)
chr5 (79-147)||(43604734-43604802)
chr5 (79-147)||(43610226-43610294)
chr5 (36-143)||(22536733-22536840)
chr5 (98-156)||(14520796-14520854)
chr5 (31-143)||(10592856-10592967)
chr5 (80-143)||(16544006-16544069)
chr5 (80-143)||(16546228-16546291)
chr5 (81-158)||(33768697-33768774)
chr5 (81-158)||(33791829-33791906)
chr5 (81-150)||(37556130-37556199)
chr5 (80-148)||(25077713-25077781)
chr5 (80-148)||(25135682-25135750)
chr5 (81-156)||(2785888-2785963)
chr5 (81-156)||(31396489-31396564)
chr5 (80-143)||(40379690-40379753)
chr5 (98-147)||(31180773-31180822)
chr5 (81-158)||(31401344-31401421)
chr5 (81-150)||(37560952-37561021)
chr5 (98-147)||(43592797-43592846)
chr5 (20-147)||(28807084-28807211)
chr5 (80-143)||(40381901-40381964)
chr5 (98-148)||(11916452-11916502)
chr5 (98-147)||(12083659-12083708)
chr5 (106-156)||(35388196-35388246)
chr5 (30-74)||(35388152-35388196)
chr5 (30-119)||(25412396-25412485)
chr5 (112-147)||(43625605-43625640)
chr5 (30-119)||(13342694-13342784)
chr5 (97-150)||(31004650-31004704)
chr5 (30-93)||(30182247-30182311)
[»] scaffold0510 (1 HSPs)
scaffold0510 (20-157)||(1082-1219)
[»] chr6 (50 HSPs)
chr6 (20-157)||(23896821-23896958)
chr6 (20-156)||(5756951-5757087)
chr6 (20-156)||(22709509-22709645)
chr6 (31-156)||(6097861-6097986)
chr6 (20-156)||(2171968-2172104)
chr6 (44-156)||(5674229-5674341)
chr6 (20-147)||(30125026-30125153)
chr6 (32-156)||(3073219-3073343)
chr6 (30-156)||(26253589-26253715)
chr6 (20-147)||(11857432-11857559)
chr6 (79-147)||(14741934-14742002)
chr6 (31-143)||(16578977-16579089)
chr6 (31-143)||(16616291-16616403)
chr6 (79-147)||(22010197-22010265)
chr6 (32-148)||(27647475-27647591)
chr6 (32-156)||(411685-411809)
chr6 (31-143)||(16554466-16554578)
chr6 (31-143)||(16631022-16631134)
chr6 (79-148)||(34166673-34166742)
chr6 (79-143)||(6136471-6136535)
chr6 (80-156)||(6439008-6439083)
chr6 (81-147)||(5343990-5344056)
chr6 (79-148)||(13150856-13150925)
chr6 (31-143)||(25420809-25420921)
chr6 (81-158)||(33329930-33330007)
chr6 (31-143)||(33342564-33342676)
chr6 (81-157)||(16839256-16839332)
chr6 (98-147)||(5016977-5017026)
chr6 (98-147)||(5266596-5266645)
chr6 (98-147)||(14737093-14737142)
chr6 (98-158)||(24714938-24714999)
chr6 (98-147)||(31085954-31086003)
chr6 (81-158)||(33335427-33335504)
chr6 (79-148)||(34151835-34151904)
chr6 (79-148)||(34164451-34164520)
chr6 (79-143)||(6026846-6026910)
chr6 (81-156)||(6005932-6006007)
chr6 (50-147)||(10076673-10076770)
chr6 (100-147)||(28155098-28155145)
chr6 (98-147)||(18234650-18234699)
chr6 (98-150)||(5571754-5571806)
chr6 (98-135)||(603772-603809)
chr6 (98-143)||(16652728-16652773)
chr6 (103-147)||(21272470-21272514)
chr6 (109-156)||(31980094-31980141)
chr6 (29-113)||(5407373-5407457)
chr6 (29-113)||(5411698-5411782)
chr6 (78-119)||(5413941-5413982)
chr6 (30-93)||(5406643-5406707)
chr6 (30-93)||(5410968-5411032)
[»] scaffold0087 (3 HSPs)
scaffold0087 (20-156)||(43434-43570)
scaffold0087 (27-85)||(36376-36434)
scaffold0087 (96-156)||(36324-36384)
[»] chr1 (31 HSPs)
chr1 (30-158)||(24202249-24202377)
chr1 (20-158)||(13604093-13604231)
chr1 (20-158)||(19360910-19361048)
chr1 (20-156)||(19365768-19365904)
chr1 (27-156)||(26644373-26644502)
chr1 (20-156)||(51764990-51765126)
chr1 (32-157)||(20622697-20622822)
chr1 (20-156)||(9986785-9986921)
chr1 (32-156)||(40281958-40282082)
chr1 (20-148)||(41391051-41391178)
chr1 (80-158)||(44023375-44023452)
chr1 (79-156)||(39446006-39446082)
chr1 (78-156)||(21536112-21536190)
chr1 (50-143)||(9036015-9036108)
chr1 (32-143)||(21053552-21053663)
chr1 (80-157)||(1054513-1054589)
chr1 (80-143)||(44203230-44203293)
chr1 (98-156)||(3282273-3282331)
chr1 (98-156)||(37070334-37070392)
chr1 (98-147)||(13598967-13599016)
chr1 (79-147)||(25439407-25439475)
chr1 (79-147)||(25444600-25444668)
chr1 (98-147)||(24793674-24793723)
chr1 (98-148)||(41398764-41398814)
chr1 (81-156)||(43987948-43988023)
chr1 (98-147)||(13659840-13659889)
chr1 (98-139)||(16124197-16124238)
chr1 (29-113)||(11348121-11348205)
chr1 (98-135)||(29652381-29652418)
chr1 (20-93)||(20762310-20762384)
chr1 (29-113)||(3156487-3156571)
[»] scaffold0006 (4 HSPs)
scaffold0006 (20-158)||(132750-132888)
scaffold0006 (98-147)||(6252-6301)
scaffold0006 (98-147)||(3060-3109)
scaffold0006 (98-147)||(149601-149650)
[»] chr2 (32 HSPs)
chr2 (27-157)||(40739328-40739458)
chr2 (44-157)||(32289147-32289260)
chr2 (20-156)||(3492241-3492377)
chr2 (20-148)||(25410130-25410258)
chr2 (20-157)||(30832920-30833057)
chr2 (33-156)||(4484800-4484923)
chr2 (20-147)||(9295870-9295997)
chr2 (32-156)||(6266274-6266398)
chr2 (20-147)||(14291990-14292117)
chr2 (20-147)||(11098395-11098522)
chr2 (79-147)||(39811485-39811553)
chr2 (79-147)||(44310479-44310547)
chr2 (20-93)||(28258713-28258786)
chr2 (79-147)||(32247276-32247344)
chr2 (32-143)||(12647844-12647955)
chr2 (96-156)||(28258669-28258729)
chr2 (96-154)||(36757419-36757477)
chr2 (98-147)||(8389632-8389681)
chr2 (98-147)||(10706734-10706783)
chr2 (81-158)||(19344935-19345012)
chr2 (98-147)||(21630511-21630560)
chr2 (98-147)||(33528106-33528155)
chr2 (98-147)||(39483443-39483492)
chr2 (104-147)||(20522794-20522837)
chr2 (98-147)||(23077953-23078002)
chr2 (81-156)||(19349793-19349868)
chr2 (102-156)||(33118696-33118750)
chr2 (98-147)||(13569896-13569945)
chr2 (29-121)||(29867491-29867583)
chr2 (53-119)||(36206132-36206199)
chr2 (78-132)||(17865724-17865778)
chr2 (30-93)||(4503577-4503641)
[»] chr4 (42 HSPs)
chr4 (20-157)||(13992743-13992880)
chr4 (33-156)||(28467977-28468100)
chr4 (27-156)||(5148173-5148302)
chr4 (32-156)||(31495778-31495902)
chr4 (30-156)||(31985127-31985253)
chr4 (20-147)||(24742442-24742569)
chr4 (20-147)||(9223907-9224034)
chr4 (20-147)||(9228694-9228821)
chr4 (33-147)||(51520928-51521042)
chr4 (79-147)||(3814529-3814597)
chr4 (79-147)||(56141519-56141587)
chr4 (80-158)||(18856234-18856311)
chr4 (80-156)||(18860446-18860521)
chr4 (96-158)||(5143807-5143869)
chr4 (66-147)||(5733158-5733239)
chr4 (29-158)||(6742886-6743015)
chr4 (32-148)||(7122274-7122390)
chr4 (32-148)||(7124496-7124612)
chr4 (31-143)||(8392994-8393106)
chr4 (95-154)||(8689038-8689097)
chr4 (80-147)||(45347325-45347392)
chr4 (31-143)||(8395203-8395315)
chr4 (98-147)||(16628354-16628403)
chr4 (98-147)||(38151919-38151968)
chr4 (99-147)||(3778116-3778164)
chr4 (79-143)||(5135661-5135725)
chr4 (79-143)||(5137887-5137951)
chr4 (97-147)||(5268700-5268750)
chr4 (98-147)||(10047932-10047981)
chr4 (98-147)||(16622775-16622824)
chr4 (98-144)||(29761182-29761228)
chr4 (98-147)||(54867745-54867794)
chr4 (20-116)||(18712294-18712390)
chr4 (27-93)||(5143756-5143823)
chr4 (98-156)||(5396164-5396221)
chr4 (29-138)||(6655333-6655442)
chr4 (98-147)||(9194164-9194214)
chr4 (98-144)||(36314715-36314761)
chr4 (98-144)||(36328924-36328970)
chr4 (30-114)||(3909715-3909800)
chr4 (29-113)||(2209122-2209206)
chr4 (98-134)||(25861527-25861563)
[»] scaffold0188 (1 HSPs)
scaffold0188 (20-156)||(17431-17567)
[»] scaffold0491 (2 HSPs)
scaffold0491 (31-158)||(9183-9310)
scaffold0491 (31-156)||(11628-11753)
[»] scaffold0140 (1 HSPs)
scaffold0140 (30-156)||(7911-8037)
[»] scaffold1455 (1 HSPs)
scaffold1455 (80-156)||(1709-1784)
[»] scaffold0464 (1 HSPs)
scaffold0464 (80-156)||(870-945)
[»] scaffold0286 (2 HSPs)
scaffold0286 (20-156)||(21939-22075)
scaffold0286 (29-138)||(10935-11044)
[»] scaffold0135 (1 HSPs)
scaffold0135 (79-147)||(34562-34630)
[»] scaffold1519 (1 HSPs)
scaffold1519 (20-119)||(519-618)
[»] scaffold0565 (1 HSPs)
scaffold0565 (32-143)||(3062-3173)
[»] scaffold0355 (1 HSPs)
scaffold0355 (79-147)||(3345-3413)
[»] scaffold0098 (2 HSPs)
scaffold0098 (96-156)||(45744-45804)
scaffold0098 (20-93)||(45687-45760)
[»] scaffold0674 (1 HSPs)
scaffold0674 (78-143)||(4233-4298)
[»] scaffold0665 (1 HSPs)
scaffold0665 (98-147)||(8216-8265)
[»] scaffold0197 (2 HSPs)
scaffold0197 (81-158)||(18661-18738)
scaffold0197 (81-143)||(13796-13858)
[»] scaffold0137 (1 HSPs)
scaffold0137 (80-143)||(5871-5934)
[»] scaffold0466 (1 HSPs)
scaffold0466 (30-113)||(6750-6833)
[»] scaffold0259 (1 HSPs)
scaffold0259 (81-143)||(1751-1813)
[»] scaffold0036 (1 HSPs)
scaffold0036 (98-147)||(86153-86203)
[»] scaffold0028 (1 HSPs)
scaffold0028 (81-143)||(148456-148518)
[»] scaffold0009 (1 HSPs)
scaffold0009 (81-143)||(176462-176524)
[»] scaffold0066 (1 HSPs)
scaffold0066 (29-112)||(20879-20963)


Alignment Details
Target: chr3 (Bit Score: 362; Significance: 0; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 173 - 586
Target Start/End: Complemental strand, 42771073 - 42770659
Alignment:
Q  173 ataactagcaaactagtggagaaatatagagtgagagagtattttggagaaatggcaccaagaaaacacaaagttgaagaaacgtcactgacgccgagaa 272  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42771073 ataactagcaaactagttgagaaatatagagtgagagagtattttggagaaatggcaccaagaaaacacaaagttgaagaaacgtcactgacaccgagaa 42770974  T
Q  273 gagtaactcattcattgaagaagagttcaggttccaagtttgtcaagttaccgaatccgagaaattctgagtcagaagaagaagatagagnnnnnnngtt 372  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||    
T  42770973 gagtaactcattctttgaagaagagttcaggttccaagtttgtcaagttaccgaatccgagaaattctgagtcagaagaagaagatagagaaaaaaagtt 42770874  T
Q  373 gaagtgaaggggaagagtaaaaaaggttatacagctgaaggtgagaaagtcgaagaagaacattcaagaagcttatgtggctgaaggtgaaatctcttag 472  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42770873 gaagtgaaggggaaaagtaaaaaaggttatacagctgaaggtgagaaagtcgaagaagaacattcaagaaacttatgtggctgaaggtgaaatctcttag 42770774  T
Q  473 aatgtttcacaagattttgtggttgaaggtgagaaagcggagaagaaagctctaagaatgttaaataaggtatggctaaaagtgaaatctttgaggcggt 572  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42770773 aatgtttcacaagattttgtggttgaaggtgagaaagcggagaagaaagctctaagaatgttaaataaggtatggctgaaagtgaaatctttgaggcggt 42770674  T
Q  573 tccac-aggttctgc 586  Q
    ||||| |||||||||    
T  42770673 tccacaaggttctgc 42770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 37408160 - 37408034
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  37408160 aatcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttccaaacc 37408061  T
Q  132 acaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||||||| ||||||||    
T  37408060 acaaatttgaagccaaatctcaacatt 37408034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 37726163 - 37726299
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  37726163 acgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacgatttctctg 37726262  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||||| ||||||    
T  37726263 ttcttccaaaccacaaatttgaagccaaatctcaaca 37726299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 26928216 - 26928080
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| ||||| || ||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26928216 acgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 26928117  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  26928116 ttcttccagaccacaaatttgaagccaaatctcaaca 26928080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 33386273 - 33386137
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  33386273 acgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 33386174  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||| |  ||||||||||||||||||||| ||||||    
T  33386173 ttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 23198405 - 23198532
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  23198405 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagac 23198504  T
Q  131 cacaaatttgaagccaaatttcaacatt 158  Q
    ||||||||||||||||||| ||||||||    
T  23198505 cacaaatttgaagccaaatctcaacatt 23198532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 23200604 - 23200731
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||| ||| ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  23200604 aaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 23200703  T
Q  131 cacaaatttgaagccaaatttcaacatt 158  Q
    ||||||||||||||||||| ||||||||    
T  23200704 cacaaatttgaagccaaatctcaacatt 23200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 7782587 - 7782713
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||| ||| ||||| |||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| | ||    
T  7782587 aaatcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagac 7782686  T
Q  131 cacaaatttgaagccaaatttcaacat 157  Q
    ||||||||||||||||||| |||||||    
T  7782687 cacaaatttgaagccaaatctcaacat 7782713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 27453445 - 27453581
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||| |||| || ||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  27453445 acgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctg 27453544  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
     |||| || ||||||||||||||||||||| ||||||    
T  27453545 ctctttcagaccacaaatttgaagccaaatctcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 1306468 - 1306606
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||| ||  || ||||||||||||||||||||| || ||||||||||||||||    
T  1306468 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttctctg 1306567  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||| |||| |||||||||||||||| ||||||||    
T  1306568 ttcttccagaccataaatttgaagccaaatctcaacatt 1306606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 800809 - 800685
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  800809 aatcgtgtcacgatttggcaccccgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 800710  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    ||||||| |||| ||||| ||||||    
T  800709 acaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 40372391 - 40372264
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  40372391 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 40372292  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  40372291 ttcttccagaccacaaatttgaagccaa 40372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 8477867 - 8477994
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| || || |||||| |||||||||||   | ||||||||||||||||||||||||||||||| |||||||||    
T  8477867 acgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctg 8477966  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  8477967 ttcttccagaccacaaatttgaagccaa 8477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 22172797 - 22172670
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  |||||||||  ||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  22172797 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 22172698  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  22172697 ttcttccagaccacaaatttgaagccaa 22172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 7167747 - 7167874
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||| ||||||||||||||||||||||||||||||||||||    
T  7167747 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctg 7167846  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| | |||||||||||||||||    
T  7167847 ttcttccagaacacaaatttgaagccaa 7167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 27974493 - 27974433
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 28501228 - 28501160
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28501228 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28501160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 28503395 - 28503327
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28503395 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 54634833 - 54634722
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||||||| ||||  ||||||||||   |||||||||||   | |||||||||||| |||||||||||||||||||||||| ||||||||||| |||    
T  54634833 aatcgtgccacgattttgcaccctgcaacttagctcacggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagacc 54634734  T
Q  132 acaaatttgaag 143  Q
    ||||||||||||    
T  54634733 acaaatttgaag 54634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 4598983 - 4599095
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | |||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  4598983 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaa 4599081  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  4599082 ccacaaatttgaag 4599095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 4601204 - 4601316
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | |||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  4601204 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaa 4601302  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  4601303 ccacaaatttgaag 4601316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 18656940 - 18657021
Alignment:
Q  66 tcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  18656940 tcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 18657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 27974538 - 27974477
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27974538 aatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 27974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 6716208 - 6716101
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||  |||||||||| | |||||||||||   | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||    
T  6716208 aatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacc 6716109  T
Q  132 acaaattt 139  Q
    ||||||||    
T  6716108 acaaattt 6716101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 2676649 - 2676572
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| |||||||    
T  2676649 atcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaacatt 2676572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 3617158 - 3617046
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||| ||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  3617158 aaatcgtgacacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccaga 3617060  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  3617059 ccacaaatttgaag 3617046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10055881 - 10055812
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10055881 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10058103 - 10058034
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10058103 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10060325 - 10060256
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10060325 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10062547 - 10062478
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10062547 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10064769 - 10064700
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10064769 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10066991 - 10066922
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10066991 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 36029639 - 36029708
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36029639 aaaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 36029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 39032075 - 39032015
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaacatt 39032015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 2672493 - 2672418
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||  |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  2672493 atcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaaca 2672418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 10208904 - 10208790
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcca 127  Q
    |||||||||||||| |||||   |||||||| || | ||||||||||  | |||||| |||||||| |||||||||||||| |||||| |||||||||||    
T  10208904 caaaatcgtgccacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttcca 10208806  T
Q  128 aaccacaaatttgaag 143  Q
    ||||||||||||||||    
T  10208805 aaccacaaatttgaag 10208790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 10211104 - 10210994
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcca 127  Q
    |||||||||||||| |||||   |||||||| || | ||||||||||  | |||||| |||||||| ||||||||||||||||||||| |||||||||||    
T  10211104 caaaatcgtgccacgatttgcacccctgcaaccctaactcacggcatc-ctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttcca 10211006  T
Q  128 aaccacaaattt 139  Q
    ||||||||||||    
T  10211005 aaccacaaattt 10210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 24694775 - 24694656
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcc-a 127  Q
    |||||||||  || ||| ||||||||||||| || ||||||| |||| |||||||||| |||| ||   ||||||| ||||||||||||||||||||| |    
T  24694775 aaaatcgtgatacgattggacaccctgcaaaacatgctcacgacattgcaaaatcgtgacacgttgatgaaatcgtatcacgatttctctgttcttccaa 24694676  T
Q  128 aaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||    
T  24694675 aaccacaaatttgaagccaa 24694656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 21711768 - 21711826
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttacaaca 21711826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 27352182 - 27352092
Alignment:
Q  54 ctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 144  Q
    |||||||| |||||||||||     |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||| ||||    
T  27352182 ctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagc 27352092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 27038589 - 27038666
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||| ||   |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  27038589 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaaca 27038666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 27986074 - 27986001
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 93  Q
    |||||| |||| ||||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  27986074 acgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 30709316 - 30709267
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 30709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 32475997 - 32476074
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| |||||||||||||||||||||||  |||||||||    
T  32475997 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaacatt 32476074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 25637089 - 25637029
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaattt 139  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  25637089 aaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaattt 25637029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 32143868 - 32143928
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 32480855 - 32480935
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacattaca 161  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| |||||||||||||||||||||||  ||||||| ||||    
T  32480855 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaacagtaca 32480935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 27027273 - 27027331
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtctattttcaaca 27027331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 16264896 - 16264945
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaa 16264945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 32143811 - 32143884
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 93  Q
    |||||| ||||| |||||| ||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||    
T  32143811 acgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 27986017 - 27985957
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaaatctcaaca 27985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 1730959 - 1730917
Alignment:
Q  105 gtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaa 1730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 8738599 - 8738550
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 9090837 - 9090788
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9090788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 35926057 - 35926105
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaa 35926105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 40592302 - 40592253
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaa 40592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 435 - 543
Target Start/End: Original strand, 42770110 - 42770219
Alignment:
Q  435 ttcaagaagcttatgtggctgaaggtgaaatctcttagaatgtttcacaagattttgtggttgaaggtgagaaagcgg-agaagaaagctctaagaatgt 533  Q
    ||||||||| || |||||||||||||||||||||| |||| ||| || ||| || || ||||||||||||||||| || |||||||| ||||| ||| ||    
T  42770110 ttcaagaaggttttgtggctgaaggtgaaatctctaagaaggttccaaaaggttctgcggttgaaggtgagaaagaggaagaagaaaactctaggaacgt 42770209  T
Q  534 taaataaggt 543  Q
    | || |||||    
T  42770210 tcaagaaggt 42770219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 48438782 - 48438831
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaa 48438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 40845220 - 40845279
Alignment:
Q  97 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||| ||||| ||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 2671200 - 2671111
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcac 109  Q
    |||||| | ||| |||||||||| ||||| || ||||||||| |||||||||||     ||||| |||||||||||||||||||||||||    
T  2671200 acgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 6718345 - 6718300
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 6718300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 16498694 - 16498645
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  16498694 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 16498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 40735063 - 40735018
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 45282642 - 45282597
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 45282597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 49200137 - 49200226
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgtt 121  Q
    |||||| ||| ||| ||||||||||||| || |||||||||||| |||||||||| ||||     |||||||||||||||||||||||||    
T  49200137 atcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacgcctgtaaaatcgtgtcacgatttctctgtt 49200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 47923371 - 47923328
Alignment:
Q  104 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaa 47923328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 8127197 - 8127255
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||| ||||||||||||||| ||  || ||| ||||||||||||||||||||||||||    
T  8127197 aaatcttgtcacgatttctctatttctcaaaatcacaaatttgaagccaaatttcaaca 8127255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 8512753 - 8512815
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||   |||||||||| ||||||| ||||||||| ||||||||| |||||||||    
T  8512753 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 8512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 24968630 - 24968692
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||  | |||||||| ||||||| || |||||||||||||||| |||||||||    
T  24968630 atcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaag 24968692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 465
Target Start/End: Complemental strand, 42773014 - 42772977
Alignment:
Q  428 aagaacattcaagaagcttatgtggctgaaggtgaaat 465  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  42773014 aagaacattcaagaagcttttgtggctgaaggtgaaat 42772977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 43404486 - 43404523
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaa 135  Q
    |||||||||||||||||||||||||||||||| |||||    
T  43404486 aaatcgtgtcacgatttctctgttcttccaaaacacaa 43404523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 42772323 - 42772409
Alignment:
Q  494 gttgaaggtgagaaagcgga-gaagaaagctctaagaatgttaaataaggta---tggctaaaagtgaaatctttgaggcggttcca 576  Q
    |||||||||| ||||||||| ||||||| ||||||||| |||||| |||||    ||||| || |||||||||||||| ||||||||    
T  42772323 gttgaaggtgggaaagcggaagaagaaaactctaagaacgttaaagaaggttccgtggctgaaggtgaaatctttgagacggttcca 42772409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 42772425 - 42772480
Alignment:
Q  409 gaaggtgagaaagtcgaagaagaacattcaagaagcttatgtggctgaaggtgaaa 464  Q
    |||||||||||||  ||||||||| | |||||||| || |||||||||||||||||    
T  42772425 gaaggtgagaaagaggaagaagaaaactcaagaaggttctgtggctgaaggtgaaa 42772480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 8517633 - 8517695
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||   |||||||||| ||||||| ||||||||| | ||||||| |||||||||    
T  8517633 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaag 8517695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 3393319 - 3393219
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 118  Q
    |||||| | |||||||||| ||| ||| ||| | ||  |||||||||| || |||||| ||||||||||| ||||  | ||||||||| |||||||||||    
T  3393319 acgatttcccaaaatcgtgtcacgattggacgcactaaaaaccagctctcgacattaccaaaatcgtgtcgcgattgccaaatcgtgttacgatttctct 3393220  T
Q  119 g 119  Q
    |    
T  3393219 g 3393219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 9634816 - 9634856
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9634816 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 2479823 - 2479960
Alignment:
Q  19 aacgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 118  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  2479823 aacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctct 2479922  T
Q  119 gttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||| |||||||||||||||||||||||||||||||    
T  2479923 gttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 47264131 - 47264267
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||| ||| ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  47264131 acgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctcta 47264230  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  47264231 ttcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 44847745 - 44847619
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||| ||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  44847745 aaaattgtgccacgatctgacatcctgcaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaa 44847646  T
Q  130 ccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||    
T  44847645 ccacaaatttgaagccaaatttcaaca 44847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 39731069 - 39730933
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  39731069 acgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 39730970  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  39730969 ttcttccagaccacaaatttgaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 48408534 - 48408398
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  48408534 acgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 48408435  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||| || ||||||||||||||||||||| ||||||    
T  48408434 ttctttcagaccacaaatttgaagccaaatctcaaca 48408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 21646520 - 21646643
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  21646520 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaacca 21646619  T
Q  133 caaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||| ||||||    
T  21646620 caaatttgaagccaaatgtcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 21983738 - 21983869
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcc 126  Q
    ||||||||| |||| | ||| | ||||||||||||||||||||| |||| ||||||||||||||||||   |||||||||||||||||||||||||||||    
T  21983738 cacaaaatcatgccgcgattggtcaccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttcc 21983837  T
Q  127 aaaccacaaatttgaagccaaatttcaacatt 158  Q
    ||||||||||||||||||||| ||||||||||    
T  21983838 aaaccacaaatttgaagccaattttcaacatt 21983869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 21989402 - 21989531
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcc 126  Q
    |||||||||||||||| ||| | | ||||||||||||||||||| |||| ||||||||||||||||||   ||||| |||||||||||||||||||||||    
T  21989402 cacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttcc 21989501  T
Q  127 aaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||||||| ||||||||    
T  21989502 aaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 43504598 - 43504721
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  43504598 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacca 43504697  T
Q  133 caaatttgaagccaaatttcaaca 156  Q
    |||||||||||| |||| ||||||    
T  43504698 caaatttgaagctaaatctcaaca 43504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 18409287 - 18409401
Alignment:
Q  44 atttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||    
T  18409287 atttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaag 18409386  T
Q  144 ccaaatttcaacatt 158  Q
    |||||| ||||||||    
T  18409387 ccaaatctcaacatt 18409401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 18414139 - 18414275
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||    
T  18414139 acgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctg 18414238  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| |||| |||||||||||||||| ||||||    
T  18414239 ttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 24789562 - 24789426
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |||||||||||| |||||||||||  || ||||||||||||||||||||| ||||||||||||||| |||    
T  24789562 acgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctg 24789463  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||| ||||| ||||||    
T  24789462 ttcttccagaccacaaatttgaagacaaatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 2058470 - 2058596
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||   |||| ||||||||||||||||||||||||||||||||||||||    
T  2058470 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcaaa-tcgtgtcacgatgccaaaatcgtgtcacgatttctctg 2058568  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  2058569 ttcttccagaccacaaatttgaagccaa 2058596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 20357163 - 20357036
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||    
T  20357163 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 20357064  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  20357063 ttcttccagaccacaaatttgaagccaa 20357036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 21640288 - 21640415
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |  ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  21640288 acgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 21640387  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  21640388 ttcttccagaccacaaatttgaagccaa 21640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 25767410 - 25767540
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | |||||||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||       
T  25767410 acgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttct--- 25767506  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
       ||||| ||||||||||||||||||||| ||||||    
T  25767507 ---ttccagaccacaaatttgaagccaaatatcaaca 25767540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 31109146 - 31109068
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31109146 aaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc-aatttcaacatt 31109068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 1532963 - 1532883
Alignment:
Q  77 caaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  1532963 caaattcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaacat 1532883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 4873645 - 4873713
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4873645 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 4873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 12406781 - 12406849
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12406781 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 12406849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 6592797 - 6592909
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  6592797 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccaga 6592895  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  6592896 ccacaaatttgaag 6592909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 32060764 - 32060876
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  32060764 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccaga 32060862  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  32060863 ccacaaatttgaag 32060876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 12397416 - 12397484
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  12397416 aaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaa 12397484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 21811874 - 21811745
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaac-cagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 118  Q
    |||||| | ||| |||||||||| ||||  ||||||||||||   |||||||||||  | | |||||||||||||| |||||||||| ||||||| ||||    
T  21811874 acgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcacggcatctc-agatcgtgtcacgatggcaaaatcgtgacacgattcctct 21811776  T
Q  119 gttcttccaaaccacaaatttgaagccaaat 149  Q
    ||||||||| |||||||||||||||||||||    
T  21811775 gttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 6595013 - 6595125
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||| ||||| |    
T  6595013 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccaga 6595111  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  6595112 ccacaaatttgaag 6595125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 24023895 - 24023830
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 144  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  24023895 aaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 1562511 - 1562575
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1562511 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 1562575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 18392705 - 18392768
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18392705 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 18392768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 20343592 - 20343512
Alignment:
Q  63 agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||   | ||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  20343592 agctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaag 20343512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 24260895 - 24260829
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 24260829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 79955 - 80004
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaa 80004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 16880586 - 16880648
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| |||||||||| ||||||| ||||| ||||||||||||| |||||||||    
T  16880586 atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 16885441 - 16885503
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| |||||||||| ||||||| ||||| ||||||||||||| |||||||||    
T  16885441 atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 1533039 - 1532947
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgat 112  Q
    |||||| | ||| |||||| ||| ||||| |||||||||||| |||||| ||||   ||||||| ||||||||||||||| ||||||||||||    
T  1533039 acgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 46515860 - 46515810
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttcc-aaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaa 46515810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  97 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 142  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 24265751 - 24265689
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||   |||||||||| ||||||| ||||||||| ||||||||| |||||||||    
T  24265751 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 24265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 14070298 - 14070382
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| |||  |||||||| |||||| |||||| || ||  ||||||||| ||||||||||||||||||||||||||    
T  14070298 caaaatcgtgtcacgattgaacaccctgaaaaccatgctcactgccttg-aaaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 14380326 - 14380410
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| |||  |||||||| |||||| |||||| || ||  ||||||||| ||||||||||||||||||||||||||    
T  14380326 caaaatcgtgtcacgattgaacaccctgaaaaccatgctcactgccttg-aaaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 18390506 - 18390550
Alignment:
Q  99 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaag 18390550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 4509334 - 4509369
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||||||||| |||||||||||||||||||    
T  4509334 aaaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 4511176 - 4511211
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||||||||| |||||||||||||||||||    
T  4511176 aaaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 6431502 - 6431467
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||||||||| |||||||||||||||||||    
T  6431502 aaaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 48491302 - 48491219
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    ||||||||| ||| ||| ||||||||||||| ||||||||| |||| | || ||||| |||| |  | ||||||||||||||||    
T  48491302 aaaatcgtgtcacgattggacaccctgcaaaacagctcacgacattgcgaattcgtgacacggttgccaaatcgtgtcacgatt 48491219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 4178487 - 4178413
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat 93  Q
    |||||| | |||||||||| ||| ||| ||| ||||| |||||||||| || |||||| ||||||||||||||||    
T  4178487 acgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 4178413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 2647228 - 2647180
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||| ||||||||||||||| || |||||| ||||||||||||||    
T  2647228 aaatcgtgttacgatttctctgttc-tcaaaaccataaatttgaagccaa 2647180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 26417017 - 26416925
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgtt 121  Q
    |||||||||| ||||||| ||||| | | ||||  |||| |||||| || |||||||| |||| |    ||||||||||||||||||||||||    
T  26417017 caaaatcgtgtcacaattggacactcagaaaacatgctctcggcataaccaaatcgtgacacgcttatgaaatcgtgtcacgatttctctgtt 26416925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 6e-57; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 7412816 - 7412952
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7412816 acgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 7412915  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||| ||||||||||||    
T  7412916 ttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 2627454 - 2627318
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | |||||||||| ||| ||||| |||| ||||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||| |||    
T  2627454 acgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctg 2627355  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  2627354 ttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 1261550 - 1261414
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||| |||||||| ||    
T  1261550 acgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtg 1261451  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  1261450 ttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 26288405 - 26288517
Alignment:
Q  44 atttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26288405 atttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T
Q  144 ccaaatttcaaca 156  Q
     ||| | ||||||    
T  26288505 tcaagtctcaaca 26288517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 26301662 - 26301774
Alignment:
Q  44 atttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26301662 atttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T
Q  144 ccaaatttcaaca 156  Q
     ||| | ||||||    
T  26301762 tcaagtctcaaca 26301774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 26313656 - 26313768
Alignment:
Q  44 atttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26313656 atttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T
Q  144 ccaaatttcaaca 156  Q
     ||| | ||||||    
T  26313756 tcaagtctcaaca 26313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 31043032 - 31042908
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||| |||||||| |||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  31042932 acaaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 36979892 - 36980006
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||||||| ||||| |  ||||||||| |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36979892 atcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacca 36979991  T
Q  133 caaatttgaagccaa 147  Q
    |||||||||||||||    
T  36979992 caaatttgaagccaa 36980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 4759669 - 4759542
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||   | |||||||||||||||| ||||||||||||||||||||||||    
T  4759669 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctg 4759570  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  4759569 ttcttccagaccacaaatttgaagccaa 4759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 10683874 - 10683747
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||    
T  10683874 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 10683775  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  10683774 ttcttccagaccacaaatttgaagccaa 10683747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 18870156 - 18870029
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||| |||    |||||||||||||||||||||||||||||||||||||||||    
T  18870156 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 18870057  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  18870056 ttcttccagaccacaaatttgaagccaa 18870029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 30656147 - 30656274
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||    
T  30656147 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 30656246  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  30656247 ttcttccagaccacaaatttgaagccaa 30656274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 33037422 - 33037295
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |  ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  33037422 acgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 33037323  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  33037322 ttcttccagaccacaaatttgaagccaa 33037295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 3439212 - 3439100
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||| ||| ||||  |||||||||| | |||||||||||   | ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3439212 aaatcgtgtcacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaac 3439113  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  3439112 cacaaatttgaag 3439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 6311800 - 6311927
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||||||||||||||||||||||||||||| ||||||||||    
T  6311800 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctg 6311899  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  6311900 ttcttccagaccacaaatttgaagccaa 6311927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 18852762 - 18852635
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||||||||||||||||||||||||| ||||||||||||||    
T  18852762 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctg 18852663  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  18852662 ttcttccagaccacaaatttgaagccaa 18852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 39784400 - 39784325
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  39784400 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaaca 39784325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 7289503 - 7289439
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7289503 aaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 25327740 - 25327672
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25327740 aaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 42575833 - 42575897
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42575833 aaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 42575897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 5702009 - 5701960
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 15290219 - 15290155
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15290219 aaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 15290155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 15470588 - 15470524
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15470588 aaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 15470524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 35745904 - 35745980
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  35745904 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 35745980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 4456575 - 4456625
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 10688675 - 10688626
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 25689618 - 25689573
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25689573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 19175283 - 19175232
Alignment:
Q  97 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  19175283 aaaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaaa 19175232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 19948766 - 19948856
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcatta-caaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    ||||||||| ||| ||| ||| ||||| |||||||||| || ||||| |||||||||||||||||    ||||||||||||||||||||||    
T  19948766 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgattgtcaaatcgtgtcacgatttctctg 19948856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 23799149 - 23799100
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaa 23799100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 17982376 - 17982286
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    ||||||||| ||| |||  || ||||| |||||||||| || |||||| ||||||||||||||||  | ||||| ||||||||||||||||    
T  17982376 aaaatcgtgtcacgattgaacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgattgccaaatcatgtcacgatttctctg 17982286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 31217969 - 31217895
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat 93  Q
    |||||| | |||||||||| ||||||| ||| ||||| |||||||||| || |||||| ||||||||||||||||    
T  31217969 acgatttcccaaaatcgtgtcacaattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 31217895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 42435673 - 42435782
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcca 127  Q
    |||||||||| ||| ||| ||||||||||||| || |||||||||||| |||||||||| ||||      |||| ||||||||||||||||||| ||| |    
T  42435673 caaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacgcctatgaaattgtgtcacgatttctctgtt-ttcta 42435771  T
Q  128 aaccacaaatt 138  Q
    || ||||||||    
T  42435772 aaacacaaatt 42435782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 43036127 - 43036062
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgat 93  Q
    |||||||||| ||| ||| ||||||||||||| || |||||||||||| | |||||||||||||||    
T  43036127 caaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcgaaatcgtgtcacgat 43036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 1746674 - 1746773
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 118  Q
    |||||| | |||||||||| ||| ||| ||| ||||| |||| ||||| || |||||| ||||||||||||||||  | |||| ||||||||||||||||    
T  1746674 acgatttcccaaaatcgtgtcacgattggacgccctgaaaac-agctctcgacattaccaaaatcgtgtcacgattgccaaattgtgtcacgatttctct 1746772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 11383441 - 11383406
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11383441 aaaatcgtgccacgatgccaaaatcgtgtcacgatt 11383406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 19945805 - 19945869
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcatta-caaaatcgtgtcacgat 93  Q
    ||||||||| ||| ||| ||| ||||| |||||||||| || ||||| |||||||||||||||||    
T  19945805 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgat 19945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 2e-54; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 9352943 - 9352807
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9352943 acgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccacaatcgcgtcacgatttctctg 9352844  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  9352843 ttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 36931969 - 36931837
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| ||| ||||| ||||||||||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  36931969 aaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaa 36931870  T
Q  130 ccacaaatttgaagccaaatttcaacattacat 162  Q
    ||||||||||||||| |||| ||||||||||||    
T  36931869 ccacaaatttgaagcgaaatctcaacattacat 36931837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 16407777 - 16407641
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  16407777 acgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctg 16407678  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  16407677 ttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 15464999 - 15465125
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| || |    
T  15464999 aaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcaga 15465098  T
Q  130 ccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||| ||||||    
T  15465099 ccacaaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 16409213 - 16409075
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  16409213 acgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 16409114  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    ||||| || ||||||||||||||||||||| ||||||||    
T  16409113 ttctttcagaccacaaatttgaagccaaatctcaacatt 16409075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 26177589 - 26177464
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  26177589 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacca 26177490  T
Q  133 caaatttgaagccaaatttcaacatt 158  Q
    ||||||||||||||||| ||||||||    
T  26177489 caaatttgaagccaaatctcaacatt 26177464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 9789685 - 9789810
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  9789685 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 9789784  T
Q  132 acaaatttgaagccaaatttcaacat 157  Q
    |||||||||||| ||||| |||||||    
T  9789785 acaaatttgaagacaaatctcaacat 9789810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 18442109 - 18442234
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  18442109 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 18442208  T
Q  132 acaaatttgaagccaaatttcaacat 157  Q
    |||||||||||| ||||| |||||||    
T  18442209 acaaatttgaagacaaatctcaacat 18442234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 26170480 - 26170365
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||    
T  26170480 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccatacca 26170381  T
Q  133 caaatttgaagccaaa 148  Q
     |||||||||||||||    
T  26170380 taaatttgaagccaaa 26170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 29752266 - 29752391
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||||||| ||||| |||||||||| | |||||||||||  || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  29752266 aatcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  132 acaaatttgaagccaaatttcaacat 157  Q
    |||||||||||| ||||| |||||||    
T  29752366 acaaatttgaagacaaatctcaacat 29752391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 24136348 - 24136484
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |||||||||||| |||||||||||| || |||| |||||||||||||||| |||||||||||||||| ||    
T  24136348 acgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtg 24136447  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| |||||||||||||| |||||| ||||||    
T  24136448 ttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 29720089 - 29719965
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||| || |||||||||||  || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  29720089 aatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29719990  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  29719989 acaaatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 30631813 - 30631940
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | |||||||||| ||| ||||| |  |||||||||  ||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  30631813 acgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 30631912  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  30631913 ttcttccagaccacaaatttgaagccaa 30631940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 15045145 - 15045271
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  |||||||||  |||||||||||  |||| |||||||||||| |||||||||||||||||||||||||    
T  15045145 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctg 15045243  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||| ||||||||||||||||    
T  15045244 ttcttccaaactacaaatttgaagccaa 15045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 27450274 - 27450401
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||||    
T  27450274 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 27450373  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  27450374 ttcttccagaccacaaatttgaagccaa 27450401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 29722276 - 29722150
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| |||| |||| || ||||||| |||  || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  29722276 aatcgtgtcacgatttggcaccatgcagactagctcacagcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29722177  T
Q  132 acaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||| ||||| ||||||||    
T  29722176 acaaatttgaagacaaatctcaacatt 29722150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 1456714 - 1456646
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1456714 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 27445431 - 27445558
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||||    
T  27445431 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 27445530  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||| | |||||||||||||||||||    
T  27445531 ttcttctagaccacaaatttgaagccaa 27445558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 29751600 - 29751725
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| |||||||||| | |||||||||||  || ||||||||||  ||||||||| || |||||||||||| ||||||||||| |||    
T  29751600 aatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagacc 29751699  T
Q  132 acaaatttgaagccaaatttcaacat 157  Q
    |||||||||||| ||||| |||||||    
T  29751700 acaaatttgaagacaaatctcaacat 29751725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 29402626 - 29402558
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29402626 aaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 29402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 43599242 - 43599310
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43599242 aaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43599310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 43604734 - 43604802
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43604734 aaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43604802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 43610226 - 43610294
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43610226 aaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 22536733 - 22536840
Alignment:
Q  36 gtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaa 135  Q
    ||||||| ||||  |||||||||| | |||||||||||   | ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  22536733 gtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaa 22536832  T
Q  136 atttgaag 143  Q
    ||||||||    
T  22536833 atttgaag 22536840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 14520796 - 14520854
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 14520854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 10592967 - 10592856
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||||||| ||||  |||||||||| | | |||||||||   |  |||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  10592967 aaatcgtgccacgattttgcaccctgcaacctatctcacggcacc-cggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 10592869  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  10592868 cacaaatttgaag 10592856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 16544069 - 16544006
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16544069 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16544006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 16546291 - 16546228
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16546291 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16546228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 33768697 - 33768774
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33768697 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33768774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 33791829 - 33791906
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33791829 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33791906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 37556199 - 37556130
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatt 150  Q
    |||||||||||||  | |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37556199 atcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaatt 37556130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 25077781 - 25077713
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  25077781 aatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 25135750 - 25135682
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  25135750 aatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 2785888 - 2785963
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2785888 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 31396564 - 31396489
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||  | |||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  31396564 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 31396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 40379753 - 40379690
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  40379753 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 40379690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 31180773 - 31180822
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 31180822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 31401421 - 31401344
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  | |||||||| ||||||| |||| |||| ||||||||||||||||||||||| ||||||||||    
T  31401421 atcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaacatt 31401344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 37561021 - 37560952
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatt 150  Q
    |||||||||||||    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37561021 atcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaatt 37560952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 43592797 - 43592846
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 28807211 - 28807084
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaac-cagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 118  Q
    |||||| | ||| |||||||||| ||||  ||||||||||||   |||||||||||  | | |||||||||||||  |||||||||| ||||||| ||||    
T  28807211 acgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgattgcaaaatcgtgacacgattcctct 28807113  T
Q  119 gttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||| |||| ||||||||||||||    
T  28807112 gttcttccagaccataaatttgaagccaa 28807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 40381964 - 40381901
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||| || |||||||||||||||    
T  40381964 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaag 40381901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 11916502 - 11916452
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 12083708 - 12083659
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaa 12083659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  106 tcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 35388152 - 35388196
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcat 74  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  35388152 aaaatcgtgtcacaatttggcaccctgcaaaccagctcacggcat 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 25412485 - 25412396
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    ||||||||| ||| ||| ||| ||||| |||| ||||| || |||||| ||||||||||||||||  | ||||||||||||||||||||||    
T  25412485 aaaatcgtgtcacgattggacgccctgaaaac-agctctcgacattaccaaaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 43625605 - 43625640
Alignment:
Q  112 tttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||| |||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaa 43625640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 13342784 - 13342694
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    ||||||||| ||| ||| ||| ||||  |||||||||| || |||||| ||||||||||||||||    ||||| ||||||||||||||||    
T  13342784 aaaatcgtgtcacgattggacgccctaaaaaccagctctcgacattaccaaaatcgtgtcacgattggcaaatcatgtcacgatttctctg 13342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 31004704 - 31004650
Alignment:
Q  97 aaaatcgtgtcacgatttc-tctgttcttccaaaccacaaatttgaagccaaatt 150  Q
    ||||||||| ||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  31004704 aaaatcgtgacacgatttcatctgttctcccaaaacacaaatttgaagacaaatt 31004650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 30182311 - 30182247
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcatta-caaaatcgtgtcacgat 93  Q
    |||||||||  || ||| ||| ||||| ||||||||||||| ||||| |||||||||||||||||    
T  30182311 aaaatcgtgtaacgattggacgccctgaaaaccagctcacgacattaccaaaatcgtgtcacgat 30182247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 1219 - 1082
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  1219 acgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctg 1120  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  1119 ttctttcaaaccacaaatttgaaggcaaatttcaacat 1082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 23896821 - 23896958
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  23896821 acgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctg 23896920  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23896921 ttctttcaaaccacaaatttgaaggcaaatttcaacat 23896958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 5757087 - 5756951
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||     
T  5757087 acgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcacgatgccacaatcgtgtcacaatttctcta 5756988  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||  |||||| |||||| ||||||||||||||||    
T  5756987 ttcttttaaaccataaatttaaagccaaatttcaaca 5756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 22709509 - 22709645
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||| ||||||||||    
T  22709509 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctg 22709608  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  22709609 ttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 6097861 - 6097986
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||| ||| ||||  ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  6097861 aaatcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaac 6097960  T
Q  131 cacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||| ||||| ||||||    
T  6097961 cacaaatttgaagacaaatctcaaca 6097986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 2171968 - 2172104
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| || |||| |||||||||||    
T  2171968 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctg 2172067  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| |||||||||||||| |||||| ||||||    
T  2172068 ttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 5674341 - 5674229
Alignment:
Q  44 atttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  5674341 atttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 5674242  T
Q  144 ccaaatttcaaca 156  Q
    |||| | ||||||    
T  5674241 ccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 30125153 - 30125026
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | |||||||||||||| ||||| |  ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  30125153 acgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 30125054  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  30125053 ttcttccagaccacaaatttgaagccaa 30125026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 3073219 - 3073343
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||| | ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||  ||||||||||| |||    
T  3073219 aatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagacc 3073318  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  3073319 acaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 26253715 - 26253589
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| ||| ||||| |||||||| ||| | ||||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||| || |    
T  26253715 aaaatcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcaga 26253616  T
Q  130 ccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| ||||| ||||||    
T  26253615 ccacaaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 11857432 - 11857559
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||||    
T  11857432 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 11857531  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  11857532 ttcttccagaccacaaatttgaagccaa 11857559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 14742002 - 14741934
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14742002 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 16578977 - 16579089
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||||||| ||||  |||||||||| | |||||||||||   | ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  16578977 aaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 16579076  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  16579077 cacaaatttgaag 16579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 16616403 - 16616291
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||||||| ||||  |||||||||| | |||||||||||   | ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  16616403 aaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 16616304  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  16616303 cacaaatttgaag 16616291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 22010265 - 22010197
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22010265 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 27647591 - 27647475
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||||||| ||||  |||||||||| | |||||||||||   | ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||    
T  27647591 aatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagacc 27647492  T
Q  132 acaaatttgaagccaaa 148  Q
    |||||||||||| ||||    
T  27647491 acaaatttgaagacaaa 27647475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 411809 - 411685
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||| || |||||||||||  || |||| ||||||| |||||||| ||||||||||||||| || |||||||| |||    
T  411809 aatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagacc 411710  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  411709 acaaatttgaagacaaatctcaaca 411685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 16554578 - 16554466
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||||||||||||  ||||||| || | |||||||||||   | ||||||||||||||| |||||||| |||||||||||| ||||||||||| ||    
T  16554578 aaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagac 16554479  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  16554478 cacaaatttgaag 16554466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 16631134 - 16631022
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||||||||||||  ||||||| || | |||||||||||   | ||||||||||||||| |||||||| |||||||||||| ||||||||||| ||    
T  16631134 aaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagac 16631035  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  16631034 cacaaatttgaag 16631022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 34166742 - 34166673
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  34166742 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 6136471 - 6136535
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6136471 aaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 6136535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 6439008 - 6439083
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||    
T  6439008 aatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagcc-aatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 5343990 - 5344056
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaa 5344056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 13150925 - 13150856
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  13150925 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 25420921 - 25420809
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||| | ||||||| ||||||||||||| ||||||||||| |    
T  25420921 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccaga 25420823  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  25420822 ccacaaatttgaag 25420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 33330007 - 33329930
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33330007 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33329930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 33342564 - 33342676
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | |||||| ||| |||| |||||||||||||||||||||  ||||||||||||    
T  33342564 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaa 33342662  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  33342663 ccacaaatttgaag 33342676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 16839256 - 16839332
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    |||||||||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  16839256 atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 16839332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 5017026 - 5016977
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 5016977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 5266596 - 5266645
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 5266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 14737142 - 14737093
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14737093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 24714938 - 24714999
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccac-aaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaacatt 24714999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 31086003 - 31085954
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaa 31085954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 33335504 - 33335427
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  | |||||| |  |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33335504 atcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 33335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 34151904 - 34151835
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  34151904 aaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 34151835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 34164520 - 34164451
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||| |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  34164520 aaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 34164451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 6026910 - 6026846
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||| |||||  ||||||||||||||||| || ||||||||||||||||||||||||    
T  6026910 aaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaag 6026846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 6005932 - 6006007
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||  | |||||| | ||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  6005932 atcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaaca 6006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 10076770 - 10076673
Alignment:
Q  50 caccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||| |||||| || |||| |||||||||| |||| ||   ||||| ||||||||||| ||||||||| |||| ||||||||| |||||||    
T  10076770 caccctgcaaaacagctctcgacattgcaaaatcgtgacacgctgatgaaatcatgtcacgatttttctgttctttcaaaacacaaatttaaagccaa 10076673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 28155145 - 28155098
Alignment:
Q  100 atcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 28155098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 18234650 - 18234699
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  18234650 aaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaa 18234699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 5571806 - 5571754
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatt 150  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatt 5571754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 603772 - 603809
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaa 135  Q
    |||||||||||||||||||||||||||||||| |||||    
T  603772 aaatcgtgtcacgatttctctgttcttccaaaacacaa 603809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 16652773 - 16652728
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||||||| |||||||| || |||||||||||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaag 16652728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 21272514 - 21272470
Alignment:
Q  103 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaa 21272470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 31980094 - 31980141
Alignment:
Q  109 cgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| ||||||    
T  31980094 cgatttctctgttctcccaaaacacaaatttgaagacaaatatcaaca 31980141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 5407373 - 5407457
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| ||| ||||| ||| |||| ||||| || |||||| ||||||||||||||||  |||||| |||||||||||    
T  5407373 caaaatcgtgtcacgattggacactctgaaaac-agctctcgacattaccaaaatcgtgtcacgattgcaaaatggtgtcacgatt 5407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 5411698 - 5411782
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| ||| ||||| ||| |||| ||||| || |||||| ||||||||||||||||  |||||| |||||||||||    
T  5411698 caaaatcgtgtcacgattggacactctgaaaac-agctctcgacattaccaaaatcgtgtcacgattgcaaaatggtgtcacgatt 5411782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 5413941 - 5413982
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  5413941 aaaatcgtgtcacgattaccaaatcgtgtcacgatttctctg 5413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 5406643 - 5406707
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat 93  Q
    ||||||||| ||| ||| ||| ||||| |||||||||| || |||||| ||||||||||||||||    
T  5406643 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 5406707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 5410968 - 5411032
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat 93  Q
    ||||||||| ||| ||| ||| ||||| |||||||||| || |||||| ||||||||||||||||    
T  5410968 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 5411032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 101; Significance: 9e-50; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 43570 - 43434
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||     
T  43570 acgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctcta 43471  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  43470 ttcttccaaaccataaatttgaagccaaattccaaca 43434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 36434 - 36376
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgt 85  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  36434 cacaaaatcgtgccacgatttgacaccctgcaaaccagctcacgacattacaaaatcgt 36376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 36384 - 36324
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 36324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 24202377 - 24202249
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  24202377 aaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaga 24202278  T
Q  130 ccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||||||||| ||||||||    
T  24202277 ccacaaatttgaagccaaatctcaacatt 24202249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 13604231 - 13604093
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||||||||||| ||| ||||||||| ||||||||||||||||| ||| ||||||||||| |||||| ||| |||||||||||||||||||||    
T  13604231 acgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctg 13604132  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  13604131 ttcttccaaaccacaaatttgaagacaaatctcaacatt 13604093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 19361048 - 19360910
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  19361048 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctg 19360949  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    ||||| || ||||||||||||||||||||| ||||||||    
T  19360948 ttctttcagaccacaaatttgaagccaaatctcaacatt 19360910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 19365904 - 19365768
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19365904 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 19365805  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||| || ||||||||||||||| ||||| ||||||    
T  19365804 ttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 26644502 - 26644373
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcc 126  Q
    |||||||||||||||| |||||||||| |||||||||||||| | |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  26644502 cacaaaatcgtgccacgatttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttcc 26644403  T
Q  127 aaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||| ||||||| ||| ||||    
T  26644402 aaaccacaaatttaaagccaatttttaaca 26644373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 51765126 - 51764990
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||    
T  51765126 acgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctg 51765027  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||| ||||||||| ||||||    
T  51765026 ttcttccagaccacaaatttaaagccaaatctcaaca 51764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 20622697 - 20622822
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||| || |||||||||||  || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  20622697 aatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 20622796  T
Q  132 acaaatttgaagccaaatttcaacat 157  Q
    |||||||||||| ||||| |||||||    
T  20622797 acaaatttgaagacaaatctcaacat 20622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 9986921 - 9986785
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | |||||||||| ||| ||||| ||| ||||| ||||||||||||||  || ||||||||| |||||| |||| ||||||||||||||| |||    
T  9986921 acgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctg 9986822  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||| ||||| ||||||    
T  9986821 ttcttccagaccacaaatttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 40282082 - 40281958
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| |||||||||| | |||||||||||  || ||||||||||||||||||||| ||||||||||||||| || |||||||| |||    
T  40282082 aatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagacc 40281983  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  40281982 acaaatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 41391051 - 41391178
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  |||||||||  |||||||||||  |||| |||||||||||| |||||||||||||||||||||||||    
T  41391051 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctg 41391149  T
Q  120 ttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||||| ||||||||||||||||||||    
T  41391150 ttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 44023452 - 44023375
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  44023452 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaacatt 44023375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 39446006 - 39446082
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  39446006 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 21536190 - 21536112
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21536190 aaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaattacaaca 21536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 9036108 - 9036015
Alignment:
Q  50 caccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||| | |||||||||||   | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  9036108 caccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9036015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 21053663 - 21053552
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| |||| ||||  | ||||||| |||  || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  21053663 aatcgtgtcacgatttggcaccttgcattctagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 21053564  T
Q  132 acaaatttgaag 143  Q
    ||||||||||||    
T  21053563 acaaatttgaag 21053552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 1054589 - 1054513
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  1054589 aatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaacat 1054513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 44203293 - 44203230
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  44203293 aatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 44203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 3282273 - 3282331
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 37070334 - 37070392
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 13598967 - 13599016
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 13599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 25439475 - 25439407
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25439475 aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 25444668 - 25444600
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25444668 aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 24793723 - 24793674
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24793674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 41398764 - 41398814
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 148  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 43988023 - 43987948
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||  | |||||| | ||||||| ||||| ||| ||||||||||||||||||||||| ||||||||    
T  43988023 atcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaattttcaaca 43987948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 13659840 - 13659889
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  13659840 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 13659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 16124238 - 16124197
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaattt 139  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 11348205 - 11348121
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| ||| ||||||||||||| |||||| || |||| |||||||||| |||| | |  ||||||||||||||||    
T  11348205 caaaatcgtgtcacgattagacaccctgcaaaacagctctcgacattgcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 11348121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 29652381 - 29652418
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaa 135  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29652381 aaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 20762384 - 20762310
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat 93  Q
    |||||| | |||||||||| ||| ||| ||| ||||| |||||||||| || |||||| ||||||||||||||||    
T  20762384 acgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 20762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 3156571 - 3156487
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| ||||| |||||||||||  ||||| |  |||| |||||||||| |||| | |  ||||||||||||||||    
T  3156571 caaaatcgtgtcacgatttggcaccctgcaaaatagctctcaacattgcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 3156487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 95; Significance: 3e-46; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 132888 - 132750
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| |||||||||||| ||| ||||||||| ||||||||||||||||| ||| ||||||||||| |||||| ||| |||||||||||||||||||||    
T  132888 acgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctg 132789  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  132788 ttcttccaaaccacaaatttgaagacaaatctcaacatt 132750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 6252 - 6301
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 6301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 3060 - 3109
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaa 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 149601 - 149650
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  149601 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 149650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 40739328 - 40739458
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcc 126  Q
    ||||| |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  40739328 cacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttcc 40739427  T
Q  127 aaaccacaaatttgaagccaaatttcaacat 157  Q
    | ||||||||||||||||||||| |||||||    
T  40739428 agaccacaaatttgaagccaaatctcaacat 40739458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 32289260 - 32289147
Alignment:
Q  44 atttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  32289260 atttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 32289161  T
Q  144 ccaaatttcaacat 157  Q
    |||||| |||||||    
T  32289160 ccaaatctcaacat 32289147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 3492241 - 3492377
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  3492241 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctg 3492340  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||| || ||||||||||||||||||||| ||||||    
T  3492341 ttctttcagaccacaaatttgaagccaaatctcaaca 3492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 25410130 - 25410258
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25410130 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 25410229  T
Q  120 ttcttccaaaccacaaatttgaagccaaa 148  Q
    |||||||| ||||||||||||||||||||    
T  25410230 ttcttccagaccacaaatttgaagccaaa 25410258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 30833057 - 30832920
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| || |||||||||||||||| |||| || ||||||||||||||||    
T  30833057 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctg 30832958  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  30832957 ttcttccagaccacaaatttgaagccaaatctcaacat 30832920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 4484800 - 4484923
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||| ||| ||||| |||||||||||| |||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  4484800 atcgtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 4484899  T
Q  133 caaatttgaagccaaatttcaaca 156  Q
    |||||||||||  |||| ||||||    
T  4484900 caaatttgaagtaaaatctcaaca 4484923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 9295997 - 9295870
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| || ||||||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||    
T  9295997 acgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 9295898  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  9295897 ttcttccagaccacaaatttgaagccaa 9295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 6266398 - 6266274
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| || |||| ||||||||||| |||| |||||||||||||||  |||||||||| |||    
T  6266398 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagacc 6266299  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  6266298 acaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 14291990 - 14292117
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||   | | |||||||||||||||||||||||||||||||||||||||    
T  14291990 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 14292089  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  14292090 ttcttccagaccacaaatttgaagccaa 14292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 11098522 - 11098395
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||     |||||||||||| ||||||||||||||||||||||||||||    
T  11098522 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctg 11098423  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  11098422 ttcttccagaccacaaatttgaagccaa 11098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 39811553 - 39811485
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39811553 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 44310547 - 44310479
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44310547 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44310479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 28258786 - 28258713
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 93  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28258786 acgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 32247276 - 32247344
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32247344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 12647844 - 12647955
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    ||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  12647844 aatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagac 12647942  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  12647943 cacaaatttgaag 12647955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 28258729 - 28258669
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaaca 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 36757477 - 36757419
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaa 154  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattttcaa 36757419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 8389681 - 8389632
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 10706783 - 10706734
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaa 10706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 19344935 - 19345012
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    ||||| |||||||  | |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  19344935 atcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatt 19345012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 21630511 - 21630560
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 21630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 33528155 - 33528106
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 33528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 39483443 - 39483492
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaa 39483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 20522794 - 20522837
Alignment:
Q  104 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 20522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 23078002 - 23077953
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaa 23077953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 19349793 - 19349868
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||  | |||| | | ||||||| |||||||||||||||||||||||||||| |||| ||||||||    
T  19349793 atcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 33118696 - 33118750
Alignment:
Q  102 cgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||    
T  33118696 cgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaaca 33118750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 13569896 - 13569945
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||| ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  13569896 aaatcatgtcatgatttttctgttctttcaaaccacaaatttgaagccaa 13569945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 29867583 - 29867491
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgtt 121  Q
    |||||||||| ||| ||| ||||||||| |||| | ||| || |||||| |||||||||||||| |  | ||||||||||||||||||||||||    
T  29867583 caaaatcgtgtcacgattggacaccctgaaaacaa-ctctcgacattaccaaaatcgtgtcacgcttgccaaatcgtgtcacgatttctctgtt 29867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 36206132 - 36206199
Alignment:
Q  53 cctgcaaaccagctcacggcattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||| |||||||||| || |||||| ||||||||||||||||  | ||||| ||||||||||||||||    
T  36206132 cctgaaaaccagctctcgacattaccaaaatcgtgtcacgattgccaaatcatgtcacgatttctctg 36206199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 17865724 - 17865778
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    ||||||||| |||||||   ||||| ||||||||||||||| |||||||||||||    
T  17865724 aaaatcgtgacacgatgatgaaatcatgtcacgatttctctattcttccaaacca 17865778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 4503577 - 4503641
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat 93  Q
    ||||||||| ||| ||| ||| ||||| |||||||||| || |||||| ||||||||||||||||    
T  4503577 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 4503641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 13992743 - 13992880
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | |||||||||| ||| ||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||    
T  13992743 acgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 13992842  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaacat 157  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  13992843 ttcttccagaccacaaatttgaagccaaatctcaacat 13992880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 28468100 - 28467977
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  28468100 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccatacca 28468001  T
Q  133 caaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||| ||||||    
T  28468000 caaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 5148173 - 5148302
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcc 126  Q
    |||||||||||||||| ||| | |||||||||||| |||||||| |||| ||||||||||||||| ||  |||||||||||||||||||||| |||||||    
T  5148173 cacaaaatcgtgccacgattggtcaccctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttcc 5148272  T
Q  127 aaaccacaaatttgaagccaaatttcaaca 156  Q
    ||||||||||||||||||||| ||||||||    
T  5148273 aaaccacaaatttgaagccaattttcaaca 5148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 31495778 - 31495902
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacc 131  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||    
T  31495778 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 31495877  T
Q  132 acaaatttgaagccaaatttcaaca 156  Q
    |||||||||||| ||||| ||||||    
T  31495878 acaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 31985253 - 31985127
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| ||| ||||| |||||||| ||| ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| || |    
T  31985253 aaaatcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcaga 31985154  T
Q  130 ccacaaatttgaagccaaatttcaaca 156  Q
     ||||||||||||||||||| ||||||    
T  31985153 tcacaaatttgaagccaaatctcaaca 31985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 24742442 - 24742569
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  24742442 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 24742541  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  24742542 ttcttccagaccacaaatttgaagccaa 24742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 9224034 - 9223907
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||||    
T  9224034 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 9223935  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  9223934 ttcttccagaccacaaatttgaagccaa 9223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 9228821 - 9228694
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||||    
T  9228821 acgatttcccaagatcgtgccacgatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 9228722  T
Q  120 ttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||| |||||||||||||||||||    
T  9228721 ttcttccagaccacaaatttgaagccaa 9228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 51520928 - 51521042
Alignment:
Q  33 atcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaacca 132  Q
    |||||||||| ||||| |  ||||||||| ||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51520928 atcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacca 51521027  T
Q  133 caaatttgaagccaa 147  Q
    |||||||||||||||    
T  51521028 caaatttgaagccaa 51521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 3814529 - 3814597
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3814529 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 3814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 56141587 - 56141519
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  56141587 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 56141519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 18856234 - 18856311
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18856234 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaacatt 18856311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 18860446 - 18860521
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 5143807 - 5143869
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacatt 5143869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 5733158 - 5733239
Alignment:
Q  66 tcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  5733158 tcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 5733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 6743015 - 6742886
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaa 128  Q
    ||||| |||||||| ||| | ||||||| ||| |||||| || | || |||||||||| |||| ||   |||||||||||||||||||||||||||||||    
T  6743015 caaaaacgtgccacgattaggcaccctgaaaaacagctctcgacgttgcaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaa 6742916  T
Q  129 accacaaatttgaagccaaatttcaacatt 158  Q
    |||| |||||||||||||| || |||||||    
T  6742915 accataaatttgaagccaatttacaacatt 6742886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 7122390 - 7122274
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    ||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  7122390 aatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacac 7122292  T
Q  131 cacaaatttgaagccaaa 148  Q
    ||||||||||||| ||||    
T  7122291 cacaaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 7124612 - 7124496
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    ||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  7124612 aatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacac 7124514  T
Q  131 cacaaatttgaagccaaa 148  Q
    ||||||||||||| ||||    
T  7124513 cacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 8393106 - 8392994
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    |||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  8393106 aaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccaga 8393008  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  8393007 ccacaaatttgaag 8392994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 8689097 - 8689038
Alignment:
Q  95 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaa 8689038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 45347392 - 45347325
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  45347392 aatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaa 45347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 8395315 - 8395203
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| || |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  8395315 aaatcgtgctacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccaga 8395217  T
Q  130 ccacaaatttgaag 143  Q
    ||||||||||||||    
T  8395216 ccacaaatttgaag 8395203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 16628403 - 16628354
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 16628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 38151968 - 38151919
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 38151919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 3778116 - 3778164
Alignment:
Q  99 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 3778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 5135725 - 5135661
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5135725 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 5135661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 5137951 - 5137887
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5137951 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 5137887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 5268750 - 5268700
Alignment:
Q  97 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 10047932 - 10047981
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaa 10047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 16622824 - 16622775
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaa 16622775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29761182 - 29761228
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 144  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 29761228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 54867745 - 54867794
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaa 54867794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 18712390 - 18712294
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 116  Q
    |||||| | ||| |||||||||| ||||| |  ||||||||| ||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  18712390 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 5143756 - 5143823
Alignment:
Q  27 cacaaaatcgtgccacaatttgacaccc-tgcaaaccagctcacggcattacaaaatcgtgtcacgat 93  Q
    |||||||||||||||| ||| | ||||| |||||||||||||||| |||| |||||||||||||||||    
T  5143756 cacaaaatcgtgccacgattggtcacccctgcaaaccagctcacgacattgcaaaatcgtgtcacgat 5143823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 5396221 - 5396164
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  5396221 aaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagctaattttcaaca 5396164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 6655442 - 6655333
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcca 127  Q
    |||||||||| ||| ||| ||||||||||||| || |||||||||||| |||||||||| ||||      |||||||||||||||||||||||| ||| |    
T  6655442 caaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacgcctatgaaatcgtgtcacgatttctctgtt-ttcta 6655344  T
Q  128 aaccacaaatt 138  Q
    || ||||||||    
T  6655343 aaacacaaatt 6655333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 9194164 - 9194214
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttcc-aaaccacaaatttgaagccaa 147  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaa 9194214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 36314761 - 36314715
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 144  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 36328970 - 36328924
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 144  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 3909800 - 3909715
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgattt 114  Q
    ||||||||| ||| |||||||||| |||||| || ||||||| |||| |||||||||| || | | | ||||||||||||||||||    
T  3909800 aaaatcgtgtcacgatttgacaccgtgcaaaacatgctcacgacattgcaaaatcgtgacatgcttcaaaaatcgtgtcacgattt 3909715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 2209206 - 2209122
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    |||||||||| ||| ||| | ||| ||||||| |||||| || |||| |||||||||| |||| | | |||||||||||||||||    
T  2209206 caaaatcgtgtcacgattgggcactctgcaaaacagctctcgacattgcaaaatcgtgacacgcttcaaaaatcgtgtcacgatt 2209122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 25861563 - 25861527
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccaca 134  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  25861563 aaatcgtgtcacgatttctctgttctcccaaaacaca 25861527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 17567 - 17431
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  17567 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 17468  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  17467 ttcttccagaccacaaatttgaagccaaatctcaaca 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 9183 - 9310
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  9183 aaatcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 9282  T
Q  131 cacaaatttgaagccaaatttcaacatt 158  Q
    ||||||||||||||||||| ||||||||    
T  9283 cacaaatttgaagccaaatctcaacatt 9310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 11628 - 11753
Alignment:
Q  31 aaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  11628 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 11727  T
Q  131 cacaaatttgaagccaaatttcaaca 156  Q
    ||||| ||||||||||||| ||||||    
T  11728 cacaattttgaagccaaatctcaaca 11753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 8037 - 7911
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaa 129  Q
    ||||||||| ||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || |    
T  8037 aaaatcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcaga 7938  T
Q  130 ccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||||||||| ||||||    
T  7937 ccacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 1784 - 1709
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 870 - 945
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  870 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagcc-aatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 22075 - 21939
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |  ||||||||| |||||||||||   | ||||||||||||||||||||| || |||| |||||||||||    
T  22075 acgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctg 21976  T
Q  120 ttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||||| |||||||||||||| |||||| ||||||    
T  21975 ttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 11044 - 10935
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcca 127  Q
    |||||||||| ||| ||| ||||||||||||| || |||||||||||| |||||||||| ||||      |||||||||||||||||||||||| ||| |    
T  11044 caaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacgcctatgaaatcgtgtcacgatttctctgtt-ttcta 10946  T
Q  128 aaccacaaatt 138  Q
    || ||||||||    
T  10945 aaacacaaatt 10935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 34630 - 34562
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34630 aaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 618 - 519
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 119  Q
    |||||| | ||| |||||| ||| ||||| |||||||||||| |||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  618 acgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 3062 - 3173
Alignment:
Q  32 aatcgtgccacaatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaac 130  Q
    ||||||||||| |||||   |||||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  3062 aatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagac 3160  T
Q  131 cacaaatttgaag 143  Q
    |||||||||||||    
T  3161 cacaaatttgaag 3173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 3413 - 3345
Alignment:
Q  79 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  3413 aaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 45744 - 45804
Alignment:
Q  96 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 156  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 45687 - 45760
Alignment:
Q  20 acgattgcacaaaatcgtgccacaatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 93  Q
    |||||| |||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  45687 acgatttcacagaatcgtgccacgatttgacaccctgcaaatcagctcacgacattacaaaattgtgtcacgat 45760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 4233 - 4298
Alignment:
Q  78 aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  4233 aaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 4298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 8216 - 8265
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 18738 - 18661
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacatt 158  Q
    |||||||||||||  | |||||| | ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||    
T  18738 atcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacatt 18661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 13858 - 13796
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||   |||||||||| ||||||| ||||||||| ||||||||| |||||||||    
T  13858 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 13796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 5934 - 5871
Alignment:
Q  80 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||  ||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  5934 aatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 5871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 6833 - 6750
Alignment:
Q  30 aaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatt 113  Q
    ||||||||| ||| ||| |||||||||||||||| |||||| || | | ||||||||| ||||||||||||||||||||||||||    
T  6833 aaaatcgtgtcacgattggacaccctgcaaaccatgctcactgcct-agaaaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 1813 - 1751
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||  | |||||||| ||||||| ||||||||||||||||||| |||||||||    
T  1813 atcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 86153 - 86203
Alignment:
Q  98 aaatcgtgtcacgatttctctgttcttccaaaccac-aaatttgaagccaa 147  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaa 86203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 148518 - 148456
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    |||||||||||||  | |||||||| ||||||| ||||||||||||||||||| |||||||||    
T  148518 atcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 176524 - 176462
Alignment:
Q  81 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 143  Q
    ||||||||||||   |||||||||| ||||||| ||||||||| ||||||||| |||||||||    
T  176524 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 176462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 20879 - 20963
Alignment:
Q  29 caaaatcgtgccacaatttgacaccctgcaaacca-gctcacggcattacaaaatcgtgtcacgatgccaaaatcgtgtcacgat 112  Q
    |||||||||| ||  ||| ||||||||||||| || ||||||| |||| |||||||||| |||| | |  |||||||||||||||    
T  20879 caaaatcgtgtcatgattggacaccctgcaaaacatgctcacgacattgcaaaatcgtgacacgcttcacaaatcgtgtcacgat 20963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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