View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3546_low_2 (Length: 695)
Name: NF3546_low_2
Description: NF3546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3546_low_2 |
 | |
|
| [»] scaffold0182 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 611; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 611; E-Value: 0
Query Start/End: Original strand, 19 - 685
Target Start/End: Complemental strand, 21690035 - 21689369
Alignment:
| Q |
19 |
atacattgtgttgtccttcttcgtcatcctccttcgctaactgtgactcatttggaaccacgtctttctccttctctggctgtgacttacctggtctggc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21690035 |
atacattgtgttgtccttcttcgtcatcctccttctctaactgtgactcatttggaaccacgtctttctccttctctggctgtgacttacctggtctggc |
21689936 |
T |
|
| Q |
119 |
ccagagacactcaaggaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctct |
218 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21689935 |
ccagagacactcgaggaaattcgtcgtgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttcataaggaagttgattctct |
21689836 |
T |
|
| Q |
219 |
aacaaaagcacatccaccatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaag |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21689835 |
aacaaaagcacatccaccatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgtctttctccaagatataaagcaaag |
21689736 |
T |
|
| Q |
319 |
agcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatg |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
21689735 |
agcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttccggtcaatgttaaaacatcgtcatcaaaatg |
21689636 |
T |
|
| Q |
419 |
acccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtac |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21689635 |
acccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtac |
21689536 |
T |
|
| Q |
519 |
ttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagat |
618 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
21689535 |
ttctctcctaactttagagatttattgccatgatggataggaccttttgacatcaacctcggggtctaatgcttctcaaatttttctctatttctgagat |
21689436 |
T |
|
| Q |
619 |
actcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgtacctttg |
685 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21689435 |
actcttgcaccctttgtatctttggtcgtgaactttcgggtgttggatttgtatctatgtacctttg |
21689369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 132 - 679
Target Start/End: Complemental strand, 21682159 - 21681612
Alignment:
| Q |
132 |
aggaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacat |
231 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21682159 |
aggaaattcgtcataatttttatcaattcactctcattgctatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacat |
21682060 |
T |
|
| Q |
232 |
ccaccatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccac |
331 |
Q |
| |
|
||| |||||||| | | |||||||||||||||| || ||| ||||||||||| |||| || |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
21682059 |
ccatcatcacaagaaccagttgatcaaccttaacattcatgtgccctggttcataaagcatggttttctccaagatatgtagcaaagaacatccatccac |
21681960 |
T |
|
| Q |
332 |
caacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagttta |
431 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||| | ||||||| ||||| | | ||| || |||| ||||||||| |||||| ||||||| || | |
|
|
| T |
21681959 |
gaacaacatccatgataacttttcttcaaggctatgatagccttcaagagactcgccggttaaagttaaaacatcgtcgctaaaatggcccttcaattca |
21681860 |
T |
|
| Q |
432 |
tcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaact |
531 |
Q |
| |
|
|||||||||||| |||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21681859 |
tcaatgttatcagcaatttttttgtatagatccttttgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaact |
21681760 |
T |
|
| Q |
532 |
ttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcaccct |
631 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||| ||| | ||| |||||| || || ||||||| ||||||| ||| |||| | ||||||| |
|
|
| T |
21681759 |
ttagatctgtattgccatgatggataggacctattgacacaaacttggggctgtaatgctccttaaattttgttctatttttgacataccgtggcaccct |
21681660 |
T |
|
| Q |
632 |
tcgtatctttggccgtgaactttcgggtgttggatttgtatctatgta |
679 |
Q |
| |
|
| |||||||||| |||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
21681659 |
ttgtatctttggtcgtgaattttggggtgtttgatttgtatctatgta |
21681612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 69 - 662
Target Start/End: Complemental strand, 21788801 - 21788208
Alignment:
| Q |
69 |
tttggaaccacgtctttctccttctctggctgtgacttacctggtctggccca--ga-gacactcaaggaaattcgtcatgctttttatcaattcactct |
165 |
Q |
| |
|
|||||||||| ||| |||||||| ||||||||||||| | ||||| ||||||| || |||| || |||||| || |||||||||||||||||||||| | |
|
|
| T |
21788801 |
tttggaaccatgtccttctccttatctggctgtgactcatctggtgtggcccaatgatgacagtcgaggaaagtcatcatgctttttatcaattcactat |
21788702 |
T |
|
| Q |
166 |
tgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctagttgatcaaccttaat |
265 |
Q |
| |
|
||| ||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||| |||||||| | | ||||||||||| ||||| |
|
|
| T |
21788701 |
cgtt---atctttccacaatagcttgagtactacgtaaggaagttgattctccaacagaagcacatccatcatcacaagaaccagttgatcaactttaat |
21788605 |
T |
|
| Q |
266 |
atccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagacta |
365 |
Q |
| |
|
|| ||| |||| |||||| ||||| || ||||||| |||||||| | |||||| ||||||||||| |||||||||||||| ||||||||||| || || |
|
|
| T |
21788604 |
attcatgtgcccaggttcatcaagcttggctttctctaagatatacaacaaagaacatccatccacgaacaacatccacgacagcttttcttcgaggctt |
21788505 |
T |
|
| Q |
366 |
tcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccc |
465 |
Q |
| |
|
|||||||||| ||||| || | || || |||| ||||||||| |||||||||||||||||| |||||||||||| |||| |||||||| |||| || |
|
|
| T |
21788504 |
ccaaagccttcaagagacttgccagttaaagttaaaacatcgtcgccaaaatgacccttcagttcatcaatgttatctgcaatctttttgtgcagat-cc |
21788406 |
T |
|
| Q |
466 |
tct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggaccta |
564 |
Q |
| |
|
||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||||||||||||| |
|
|
| T |
21788405 |
tctggaatgtgtccagtgttttcgatgtattttgctgcccacataagcttgtacttctctcctaacttcaaatttgtgttgtcatgatggataggaccta |
21788306 |
T |
|
| Q |
565 |
ttgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgtt |
662 |
Q |
| |
|
|||| |||| | || | ||||| ||||||||| |||| ||||||||||||||||||| ||||||| |||| || || |||||| ||| ||||||| |
|
|
| T |
21788305 |
ccgacaacaacttgggcgagtaatgcttctcaaagttttttctatttctgagatactctgccaccctttgtattttcggtcgtgaattttggggtgtt |
21788208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 132 - 682
Target Start/End: Complemental strand, 21647256 - 21646702
Alignment:
| Q |
132 |
aggaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacat |
231 |
Q |
| |
|
|||||||| ||||| | |||||||||||| ||| |||||||||||| | ||||| | ||||||| ||||| ||||||||||| ||||||||||||| |
|
|
| T |
21647256 |
aggaaatttttcatggtatttatcaattcattctcattgttatctttcaataatagtttgagtactatgtaagggagttgattctccaacaaaagcacat |
21647157 |
T |
|
| Q |
232 |
ccaccatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccat---- |
327 |
Q |
| |
|
||| |||||||| | | |||| |||||||||||||| ||| ||||||||||| |||| || ||||||| ||||||| |||||||| ||||||| |
|
|
| T |
21647156 |
ccatcatcacaagaaccagtttatcaaccttaatattcatctgccctggttcatgaagcttggctttctctaagatatgcagcaaagaacatccatatat |
21647057 |
T |
|
| Q |
328 |
ccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcag |
427 |
Q |
| |
|
|||| ||||| |||||||| | |||||||||||| ||| ||||||| ||||| || | |||||| |||| ||| ||||| ||||||||||||||| |
|
|
| T |
21647056 |
ccacgaacaatatccacgacaacttttcttcaaggctacggaagcctttaagagacttgccggtcaaagttaaaacgtcgtcgctaaaatgacccttcag |
21646957 |
T |
|
| Q |
428 |
tttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcct |
527 |
Q |
| |
|
|| |||||||||||| ||||| ||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21646956 |
ttcatcaatgttatctacaatctttttgtgtagatccttcttaattcttcccgtgtttttgatgtattttgctgcccacataagcttgtatttctctcct |
21646857 |
T |
|
| Q |
528 |
aactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgca |
627 |
Q |
| |
|
| ||| || | | |||| |||||||||||||||||||||||| |||| | |||||||||| || |||||||||| ||||||||||||||||| | ||| |
|
|
| T |
21646856 |
atcttcagctttggattgtcatgatggataggacctattgacaccaacttgggggtgtaatgctcctcaaattttgttctatttctgagatactgtggca |
21646757 |
T |
|
| Q |
628 |
cccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgtacct |
682 |
Q |
| |
|
||||| |||||||||| |||||| ||| ||||||| ||| | ||||||||||||| |
|
|
| T |
21646756 |
ccctttgtatctttggtcgtgaattttggggtgtttgatctatatctatgtacct |
21646702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 69 - 615
Target Start/End: Complemental strand, 21714758 - 21714209
Alignment:
| Q |
69 |
tttggaaccacgtctttctccttctctggctgtgacttacctggtctggccca--ga-gacactcaaggaaattcgtcatgctttttatcaattcactct |
165 |
Q |
| |
|
|||||||||| ||| |||| |||||||| |||||||| | ||||| ||||||| || |||| | ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
21714758 |
tttggaaccatgtccttcttcttctctgactgtgactcatctggtgtggcccaatgatgacaggcgaggaaattcatcatgctttttatcaatccactct |
21714659 |
T |
|
| Q |
166 |
tgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctagttgatcaaccttaat |
265 |
Q |
| |
|
|| | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |||| | | |||||||||||||| || |
|
|
| T |
21714658 |
ggtcttcatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatccatcattacaagaacaagttgatcaaccttgat |
21714559 |
T |
|
| Q |
266 |
atccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagacta |
365 |
Q |
| |
|
|| ||| ||||||||||| ||||| || || |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
21714558 |
attcatttgccctggttcatcaagcttggctctctccaagatatgaagcaaagaacatccatccacgaacaacatccacgatagcttttcttcaaggcta |
21714459 |
T |
|
| Q |
366 |
tcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccc |
465 |
Q |
| |
|
|||||||||| ||||| ||||| | | || |||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||| || |
|
|
| T |
21714458 |
ccaaagccttcaagagaccaactggttgaagctaaaacatcgttgtcaaaatgacccttcagttcatcaatgttatctgcaatctttttgtgtagat-cc |
21714360 |
T |
|
| Q |
466 |
tct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggaccta |
564 |
Q |
| |
|
||| ||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||| | |||| |||||||||||||||||| |
|
|
| T |
21714359 |
tctggaatgtgtctggtgttttctatgtattttgctgcccacataagtttgtacttctctcctttcttcagatttggattgtcatgatggataggaccta |
21714260 |
T |
|
| Q |
565 |
ttgacatcaacctcggggtgtaatacttctcaaatttttctctatttctga |
615 |
Q |
| |
|
||||| ||| | || | ||||| ||||||||| ||| ||||||||||| |
|
|
| T |
21714259 |
atgacacaaacttgggtgagtaatgcttctcaaaatttgttctatttctga |
21714209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 73 - 659
Target Start/End: Complemental strand, 21664675 - 21664080
Alignment:
| Q |
73 |
gaaccacgtctttctccttctctggctgtgacttacctggtctggcccagagacactcaaggaaattcgtcatgctttttatcaattcactcttgttgtt |
172 |
Q |
| |
|
||||||||| | |||||||||||| ||| |||| ||||||||| ||| | | | | | | ||||||| | ||||||| ||||||| ||||||||| | |
|
|
| T |
21664675 |
gaaccacgtgtatctccttctctgactgcgactcacctggtcttgccaaaatatatttgaagaaattcatgatgctttctatcaatccactcttgtcttc |
21664576 |
T |
|
| Q |
173 |
atctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctagttgatcaaccttaatatccata |
272 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |||||||| | | |||||||||||||||||||||||| |
|
|
| T |
21664575 |
atctttccacaatagcttgagtacttgataaggtagttgattctccaacaaaagcacatccatcatcacaagaaccagttgatcaaccttaatatccata |
21664476 |
T |
|
| Q |
273 |
ggccctggttcaacaagcc---tgc--ctttc-tccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactat |
366 |
Q |
| |
|
||| |||| ||| | | || | | | | | |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| || |
|
|
| T |
21664475 |
ggctctgggtcatccatccacgtacaacatccatccaagatataaagcaaagagcatccatccacgaacaatatccacgacagcttttcttcaaggcttc |
21664376 |
T |
|
| Q |
367 |
caaagccttcgagagaatttctggtcaatgttacaa---catcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatc |
463 |
Q |
| |
|
|||||||||| ||||| || | ||| || |||| || |||| || ||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| |
|
|
| T |
21664375 |
caaagccttcaagagacttgccggttaaagttaaaattacatcatcgtcaaaatgacccttcagttcatcgatgttatcaaaaatctttttgtgtagatc |
21664276 |
T |
|
| Q |
464 |
cctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggacct |
563 |
Q |
| |
|
|| || || || || |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||| |
|
|
| T |
21664275 |
ccgtggattgagtcttgtattttcaatgtattttgctgcccacataagcttgtacttccctcctaacttcagatctgtattgccatgatggataggacct |
21664176 |
T |
|
| Q |
564 |
attgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatctttggccgtgaactttcgggt |
659 |
Q |
| |
|
||||||| ||| | || | ||||||||||||||| |||| ||| |||||||||| | | |||||||| |||||||||| |||||||||| |||| |
|
|
| T |
21664175 |
attgacaggaacttgggtgagtaatacttctcaaagttttttctgtttctgagattgtgtggcaccctttgtatctttggtcgtgaactttggggt |
21664080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 151 - 685
Target Start/End: Complemental strand, 15714107 - 15713579
Alignment:
| Q |
151 |
ttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctag |
250 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||| ||||||| | | || |
|
|
| T |
15714107 |
ttatcaactcactctcgttgttatctttccacaatagcttgagtacttcataaggaagttgattctccaacaaaagcacatccattatcacaagatccag |
15714008 |
T |
|
| Q |
251 |
ttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
350 |
Q |
| |
|
|||||||| |||||||| || ||||||| | ||||| || || |||||||||| |||||||||||||||||||| ||||||||||| || ||| |
|
|
| T |
15714007 |
ttgatcaagcttaatatttatgggccctgcgtgaacaa---tg---ttatccaagatatgcagcaaagagcatccatccacgaacaacatccatgacagc |
15713914 |
T |
|
| Q |
351 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
450 |
Q |
| |
|
|||||||| || ||| |||| |||| || || |||| ||| || |||| |||||||||| |||||||| |||||||| ||||||||||||| |||| | |
|
|
| T |
15713913 |
ttttcttctaggctaccaaatccttgaagtgactttccggttaaagttaaaacatcgtcactaaaatgacacttcagttcatcaatgttatcagcaatct |
15713814 |
T |
|
| Q |
451 |
ttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccat |
549 |
Q |
| |
|
||||||| || ||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| | ||||| ||| |
|
|
| T |
15713813 |
ttttgtgcagttcc-tctagaatgcttccagtgtttttgatgtattttgccgcccacataagcttgtacttctcccctgactttagatttgtattgtcat |
15713715 |
T |
|
| Q |
550 |
gatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatctttggccgtga |
649 |
Q |
| |
|
|||||||||| |||||||| | |||| | || | ||||| | ||||| | |||| || ||||||||||| || |||||||| |||||||||| ||||| |
|
|
| T |
15713714 |
gatggatagggcctattgaaaccaacttaggtgcgtaatgcatctcataatttttactttttctgagatagcctggcaccctttgtatctttggtcgtga |
15713615 |
T |
|
| Q |
650 |
actttcgggtgttggatttgtatctatgtacctttg |
685 |
Q |
| |
|
||||| ||||||| | ||||||| |||||| ||||| |
|
|
| T |
15713614 |
actttggggtgtttgctttgtatttatgtaactttg |
15713579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 132 - 659
Target Start/End: Complemental strand, 21785915 - 21785388
Alignment:
| Q |
132 |
aggaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacat |
231 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| || | |||||||||||||||| | ||| |||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
21785915 |
aggaaattcttcatgctttttatcaattcactctcgtcgctatctttccacaatagtttgaggacttcataaggaagttgattctccaacaaaagcacat |
21785816 |
T |
|
| Q |
232 |
ccaccatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccac |
331 |
Q |
| |
|
||| |||||||| | | ||||||||||||||||||| ||| |||||||| || |||| || ||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
21785815 |
ccatcatcacaagaaccagttgatcaaccttaatattcatttgccctggtacatgaagcttggctttctccaagatatgtagcaaagaacatccatccac |
21785716 |
T |
|
| Q |
332 |
caacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagttta |
431 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||| ||||| |||| ||||| | | ||| || |||| |||||| || ||||||||||||||||| | |
|
|
| T |
21785715 |
aaacaacatccacgacagcttttcttcaaggctaccaaagtcttcaagagactggccggttaaagttaaaacatcatcgctaaaatgacccttcagttca |
21785616 |
T |
|
| Q |
432 |
tcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaact |
531 |
Q |
| |
|
| ||||||||| |||| |||||||||||||| | || ||| || | || | || ||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
21785615 |
ttaatgttatcggcaatctttttgtgtagatcgcgtggattgcggcctatattctcgaggtattttgcggcccacataagcttgtacttctctcctgtct |
21785516 |
T |
|
| Q |
532 |
ttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcaccct |
631 |
Q |
| |
|
| |||| | |||| |||||||||||||||||||||||| ||| | || | ||||| ||||||||| |||| |||||||| ||||||||||||||||| |
|
|
| T |
21785515 |
tcagatttggattgtcatgatggataggacctattgacactaacttgggtgagtaatgcttctcaaagtttttcctatttcttagatactcttgcaccct |
21785416 |
T |
|
| Q |
632 |
tcgtatctttggccgtgaactttcgggt |
659 |
Q |
| |
|
| |||||||||| |||||| ||| |||| |
|
|
| T |
21785415 |
ttgtatctttggtcgtgaattttggggt |
21785388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 151 - 668
Target Start/End: Complemental strand, 21623683 - 21623160
Alignment:
| Q |
151 |
ttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctag |
250 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||| |||||| | |||||||| | | |
|
|
| T |
21623683 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaaccacatcaatcatcacaagattccg |
21623584 |
T |
|
| Q |
251 |
ttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
350 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||| |||| || || | |||| ||||| |||||||| ||||||||||| |||||||||||||| ||| |
|
|
| T |
21623583 |
ttgatcaagcttaatattcatctgccctggttcatgaagcttggctgtatccatgatatgcagcaaagaacatccatccacgaacaacatccacgacagc |
21623484 |
T |
|
| Q |
351 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
450 |
Q |
| |
|
||||||| || ||| |||||||||| ||||| |||| ||| || |||| |||||||||| ||||||||||||||||| |||||| |||||| |||| | |
|
|
| T |
21623483 |
ttttctttaatgctaccaaagccttcaagagactttccggttaaagttaaaacatcgtcactaaaatgacccttcagttcatcaatattatcagcaatct |
21623384 |
T |
|
| Q |
451 |
ttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatg |
550 |
Q |
| |
|
| ||||| | |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||| |
|
|
| T |
21623383 |
tgttgtgcatatccttctgaacttttctggtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaacttcagatttgtattgccatg |
21623284 |
T |
|
| Q |
551 |
atggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt------tctgagatactcttgcacccttcgtatctttggc |
644 |
Q |
| |
|
|||||||||||||||||||| |||| | || | ||||| ||| |||| | |||||| || || ||||||| ||||||| |||||||||| |
|
|
| T |
21623283 |
atggataggacctattgacaccaacttgggtgagtaatgcttggcaaaaaaatttctatttccgaatccgacatactctgccaccctttgtatctttggt |
21623184 |
T |
|
| Q |
645 |
cgtgaactttcgggtgttggattt |
668 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
21623183 |
cgtgaactttcgggtgttggattt |
21623160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 133 - 669
Target Start/End: Original strand, 21807802 - 21808341
Alignment:
| Q |
133 |
ggaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatc |
232 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| || |||||||||| ||||||||||| ||||||| |||||| ||||||||||| |||||||||||||| |
|
|
| T |
21807802 |
ggaaattcctcatgatttttatcaattcaccctcattgttatcttcccacaatagcttaagtactttataaggcagttgattctccaacaaaagcacatc |
21807901 |
T |
|
| Q |
233 |
caccatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcc---tgcctttctccaagatataaagcaaagagcatccatcc |
329 |
Q |
| |
|
| |||| || | | |||||||||| ||||||||||| | ||||||| ||| ||| || || || |||||||||||||||||||||||||||||||| |
|
|
| T |
21807902 |
cgttatcagaagaaccagttgatcaagcttaatatccacatgccctggctcatcaaaccacatgactgtctccaagatataaagcaaagagcatccatcc |
21808001 |
T |
|
| Q |
330 |
accaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtt |
429 |
Q |
| |
|
|| ||||||||||| || |||||||||||||| ||| |||||||||| ||||| | | ||| || |||| ||||||||| |||||||||||||||||| |
|
|
| T |
21808002 |
acgaacaacatccatgacagcttttcttcaaggctaccaaagccttcaagagactggccggttaaagttaaaacatcgtcgccaaaatgacccttcagtt |
21808101 |
T |
|
| Q |
430 |
tatcaatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctccta |
528 |
Q |
| |
|
||| ||||||||| |||| ||||||||||||| ||||| |||| || |||||| |||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
21808102 |
catcgatgttatcagcaatctttttgtgtagat-cctctagaataaagccgctgttttctatgtatttcgcagaccacataagcttgtacttctctccta |
21808200 |
T |
|
| Q |
529 |
actttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcac |
628 |
Q |
| |
|
|||| |||| | |||| ||||||||||||||||||||||| | |||| | || | ||||| |||||||| ||| |||||||||||||||||| ||| |
|
|
| T |
21808201 |
acttcagatttatatttccatgatggataggacctattgataccaacttgggtgagtaatgcttctcaagatttgttctatttctgagatactcagccac |
21808300 |
T |
|
| Q |
629 |
ccttcgtatctttggccgtgaactttcgggtgttggatttg |
669 |
Q |
| |
|
|||| |||||||||| |||||| ||| |||| || |||||| |
|
|
| T |
21808301 |
cctttgtatctttggtcgtgaattttggggtatttgatttg |
21808341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 139 - 648
Target Start/End: Complemental strand, 21628630 - 21628118
Alignment:
| Q |
139 |
tcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccat |
238 |
Q |
| |
|
||||||||| ||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
21628630 |
tcgtcatgcattttatcaattcattctcattgttatctttccacaatagcttgagtacttcataaggaagttgattctccaacaaaagcacatccatcat |
21628531 |
T |
|
| Q |
239 |
cacaatagctagttgatcaaccttaatatccataggccctgg----ttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaa |
334 |
Q |
| |
|
||||| | | |||||||||| ||||||||||||||||| ||| || ||||| | | ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21628530 |
cacaagaaccagttgatcaagcttaatatccataggccttgggtcattaaacaa-cgtaactttctccaagatataaagcaaagagcatccatccacgaa |
21628432 |
T |
|
| Q |
335 |
caacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatca |
434 |
Q |
| |
|
|||||||||||| |||||||||||||| | ||||||||| ||||| |||| || || ||| ||||||||| |||| |||||||||||| |||| |
|
|
| T |
21628431 |
caacatccacgacagcttttcttcaaggcatccaaagccttgaagagagtttcccgttaaatttaaaacatcgtcgctaaaacgacccttcagttcatca |
21628332 |
T |
|
| Q |
435 |
atgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaacttt |
533 |
Q |
| |
|
||||||||| |||| ||||||||||| | ||||| |||| |||| |||||| |||||||||| |||||||| |||||||||||||||||||| || |
|
|
| T |
21628331 |
atgttatcagcaatctttttgtgtag-ttcctctggaataagtccaatgttttctatgtattttgatgcccacacaagcttgtacttctctcctatgttc |
21628233 |
T |
|
| Q |
534 |
agatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttc |
633 |
Q |
| |
|
|||| | || ||||||||||||||||||||||||||| ||| | || | |||||||||| |||| | || | |||||||||||| || ||||||| |
|
|
| T |
21628232 |
agatttgtactgccatgatggataggacctattgacacaaacttgggtgagtaatacttcccaaaatcttttttatttctgagatgatcggccacccttt |
21628133 |
T |
|
| Q |
634 |
gtatctttggccgtg |
648 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
21628132 |
gtatctttggtcgtg |
21628118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 69 - 640
Target Start/End: Complemental strand, 21772536 - 21771962
Alignment:
| Q |
69 |
tttggaaccacgtctttctccttctctggctgtgacttacctggtctggccca--ga-gacactcaaggaaattcgtcatgctttttatcaattcactct |
165 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| |||||||| | ||||| ||||||| || |||| || ||||||||| ||||||||| |||||| |||||| |
|
|
| T |
21772536 |
tttggaaccatgtccttcttcttccctgactgtgactcatctggtgtggcccaatgatgacagtcgaggaaattcatcatgctttctatcaagccactct |
21772437 |
T |
|
| Q |
166 |
tgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctagttgatcaaccttaat |
265 |
Q |
| |
|
|| | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| | | ||||||||||||||||| |
|
|
| T |
21772436 |
cgtcttcatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatccatcatcacaagaaccagttgatcaaccttaat |
21772337 |
T |
|
| Q |
266 |
atccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagacta |
365 |
Q |
| |
|
|| ||| ||| ||||||| ||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||||||| ||| |
|
|
| T |
21772336 |
attcatgtgccatggttcattaagattcgctttctccaagatatacagcaaagaacatccatccacgaacaacatccacgacaacttttcttcaaggcta |
21772237 |
T |
|
| Q |
366 |
tcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccc |
465 |
Q |
| |
|
||||||| | ||||| |||||| | |||| |||||| || ||||||||||||||||||| ||||||||||||| |||| ||||||||||||| || |
|
|
| T |
21772236 |
cgaaagcctgcaagagaccatctggttgaagttaaaacatcatcgtcaaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagat-cc |
21772138 |
T |
|
| Q |
466 |
tct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggaccta |
564 |
Q |
| |
|
||| ||||| ||| | |||| ||||||||||||||||||||||| |||||||||||| |||| | |||| | | || |||||| |||||||||| |
|
|
| T |
21772137 |
tctggaatgtatccgttattttctatgtattttgctgcccacataagtttgtacttctctgctaatatcagatttgtgttatgatgatgaataggaccta |
21772038 |
T |
|
| Q |
565 |
ttgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatctt |
640 |
Q |
| |
|
|||||| || | || | ||||| ||||||||| |||| ||||||||||||| ||| | |||||||| ||||||| |
|
|
| T |
21772037 |
ttgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttagcaccctttgtatctt |
21771962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 134 - 640
Target Start/End: Complemental strand, 21726403 - 21725897
Alignment:
| Q |
134 |
gaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatcc |
233 |
Q |
| |
|
||||||| ||||||||| ||||||| |||||| || | |||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
21726403 |
gaaattcatcatgctttctatcaatccactctcgtcttcatctgtccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatcc |
21726304 |
T |
|
| Q |
234 |
accatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccacca |
333 |
Q |
| |
|
| |||||||| | | |||||||||||| |||||| ||| ||| ||||| | ||| |||||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
21726303 |
atcatcacaagaaccagttgatcaaccctaatattcatgtgccatggtttattaagatccgctttctccaagatatacagcaaagaacatccatccacga |
21726204 |
T |
|
| Q |
334 |
acaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatc |
433 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| ||||||| | ||||| |||||| | | || ||||||||| ||||||||||||||||||| ||| |
|
|
| T |
21726203 |
acaacatccacgacagcttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcgtcgtcaaaatgacccttcagttcatc |
21726104 |
T |
|
| Q |
434 |
aatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactt |
532 |
Q |
| |
|
|||||||||| |||| ||||||||||||| ||||| ||||| ||| ||||||| ||||||||||||||||||||||| ||||||| |||| |||| | |
|
|
| T |
21726103 |
aatgttatcagcaatctttttgtgtagat-cctctggaatgtgtccggtgttttctatgtattttgctgcccacataagtttgtactactctgctaatat |
21726005 |
T |
|
| Q |
533 |
tagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcaccctt |
632 |
Q |
| |
|
|||| | | || |||||| |||||||||||||||| || | || | ||||| ||||||||| |||| ||||||||||||| ||| | |||||||| |
|
|
| T |
21726004 |
cagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttagcaccctt |
21725905 |
T |
|
| Q |
633 |
cgtatctt |
640 |
Q |
| |
|
||||||| |
|
|
| T |
21725904 |
tgtatctt |
21725897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 142 - 639
Target Start/End: Complemental strand, 21992681 - 21992175
Alignment:
| Q |
142 |
tcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcac |
241 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
21992681 |
tcatgctttttatcaattcactctcattgttatctttccacaatagcttgagtactacgtaaggaagttgattctccaacagaagcacatccatcatcac |
21992582 |
T |
|
| Q |
242 |
aatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatc |
341 |
Q |
| |
|
|| | | ||||||||||| ||||||| ||| |||| |||||| ||||| || ||||||| |||||||| | |||||| ||||||||||| ||||||||| |
|
|
| T |
21992581 |
aagaaccagttgatcaactttaatattcatgtgcccaggttcatcaagcttggctttctctaagatatacaacaaagaacatccatccacgaacaacatc |
21992482 |
T |
|
| Q |
342 |
cacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttat |
441 |
Q |
| |
|
|| || ||||||||||| || || |||||||||| ||||| |||| | || |||| |||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
21992481 |
catgacagcttttcttcgaggcttccaaagccttcaagagactttccagctaaagttaaaacatcgtcactaaaatgacccttcagttcatcaatgttat |
21992382 |
T |
|
| Q |
442 |
caacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagat---- |
537 |
Q |
| |
|
| | ||| |||||||||||||| | || | ||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
21992381 |
cgataatctttttgtgtagatcgcatggattaagtcctgcattttcgatgtattttgctgcccacgtaagcttgtacttctctcctaacttcagatttgc |
21992282 |
T |
|
| Q |
538 |
-----gtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcaccctt |
632 |
Q |
| |
|
| |||||||||||||||||||||||||||||| ||| | || | ||| | ||||||||| | || ||||||| ||||||||||| ||||||| |
|
|
| T |
21992281 |
attgcttgtattgccatgatggataggacctattgacaccaatttgggtgagtagtgcttctcaaagtcttttctatttttgagatactctgccaccctt |
21992182 |
T |
|
| Q |
633 |
cgtatct |
639 |
Q |
| |
|
|||||| |
|
|
| T |
21992181 |
tgtatct |
21992175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 296 - 685
Target Start/End: Complemental strand, 21792356 - 21791967
Alignment:
| Q |
296 |
tttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaat |
395 |
Q |
| |
|
|||||||||||||| | |||||| ||||||||||| ||||| ||||| || ||||||||||| || ||| ||||||| || ||||| || | ||| || |
|
|
| T |
21792356 |
tttctccaagatatgcaacaaagaacatccatccacgaacaatatccatgacagcttttcttcgaggctaccaaagccgtcaagagacttgcgggttaaa |
21792257 |
T |
|
| Q |
396 |
gttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtatt |
495 |
Q |
| |
|
|||| |||||| || |||| || ||||||| ||||||||||||| |||| |||||||| ||||| || |||||||| |||| ||||||||||||| |
|
|
| T |
21792256 |
gttaaaacatcatcgctaaaacgatccttcagcgtatcaatgttatcggcaatctttttgtgcagatctttcagaatgctttcagtttttttgatgtatt |
21792157 |
T |
|
| Q |
496 |
ttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctc |
595 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| | || ||||||||||||| ||||||||||| | ||||| ||| |||||| |||||| |
|
|
| T |
21792156 |
ctgctgcccacataagcttgtacttctctcctaactccagatctgtactgccatgatggatgggacctattgatacaaaccttgggatgtaatgcttctc |
21792057 |
T |
|
| Q |
596 |
aaatttttctctatttctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgtacctttg |
685 |
Q |
| |
|
||| |||||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21792056 |
aaaattttctctctttctgagatactctgccaccctttgtatctttggttttgaacttgggggtgttggatttgtatctatgtacctttg |
21791967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 159 - 662
Target Start/End: Complemental strand, 21652542 - 21652048
Alignment:
| Q |
159 |
tcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagctagttgatcaa |
258 |
Q |
| |
|
||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||| |
|
|
| T |
21652542 |
tcactctcgttgtcgtctttccacaaaagcttgagtacttgataaggaagttgattttccaacaaaagcacatccatcatca---------gttgatcaa |
21652452 |
T |
|
| Q |
259 |
ccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttc |
358 |
Q |
| |
|
||||||||| ||| |||||| |||| ||| || ||||||||||||||| ||||| || ||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
21652451 |
ccttaatattcatgtgccctgcttcatcaacgttggctttctccaagatatgcagcaacgaacatccatccacgaacaacatccacgacaacttttcttc |
21652352 |
T |
|
| Q |
359 |
aagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgt |
458 |
Q |
| |
|
||| |||||||||||||| ||||| || | || || |||| ||||||||| |||||||||||| |||| | ||| ||||| |||| ||||||||| |
|
|
| T |
21652351 |
aaggctatcaaagccttcaagagacttgccagttaaagttaaaacatcgtcgctaaaatgaccctttagttcgttaattttatcggcaatctttttgtgt |
21652252 |
T |
|
| Q |
459 |
agatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggata |
557 |
Q |
| |
|
||||| ||| |||| || |||||| |||||||||||||||||||||||||| |||| ||||||| || | || | ||||| ||||||||||| |
|
|
| T |
21652251 |
cgatcc-tctagaataaagccgttgttttctatgtattttgctgcccacataagcttatactcctctcctggtttcatatttgtattgtcatgatggata |
21652153 |
T |
|
| Q |
558 |
ggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatctttggccgtgaactttcgg |
657 |
Q |
| |
|
||||||||||| | ||| | |||||||||| |||||||| || | ||||||||||||||||| | |||||||| |||||||||| |||||| ||| || |
|
|
| T |
21652152 |
ggacctattgaaacaaacttgggggtgtaatgtttctcaaaattgtttctatttctgagatactgtggcaccctttgtatctttggtcgtgaattttggg |
21652053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 142 - 648
Target Start/End: Complemental strand, 21705136 - 21704636
Alignment:
| Q |
142 |
tcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcac |
241 |
Q |
| |
|
||||||||||||| ||| |||||| | | |||||||||||| |||| |||||||| |||||| ||||||||||| ||||||||||||||| || |||| |
|
|
| T |
21705136 |
tcatgctttttattaatccactctcatcttcatctttccacaaaagcttgagtacttcataaggcagttgattctccaacaaaagcacatcctccctcac |
21705037 |
T |
|
| Q |
242 |
aatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatc |
341 |
Q |
| |
|
|| ||| ||||||||||||||||||| ||| ||| | | | | || || || |||||||||| |||||||| |||||||||| ||||| ||| |
|
|
| T |
21705036 |
aagagccagttgatcaaccttaatattcatcggcagtaggtacataa---tg---ttatccaagatatggagcaaagaacatccatccatgaacaatatc |
21704943 |
T |
|
| Q |
342 |
cacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttat |
441 |
Q |
| |
|
||||| |||||||| ||||| | |||||||||| ||||| |||| ||| | |||| |||||| || |||| |||||||||||| ||||||||||| |
|
|
| T |
21704942 |
cacgacagcttttcatcaaggcactcaaagccttgaagagagtttccggttagagttaaaacatcatcgctaaaacgacccttcagttcatcaatgttat |
21704843 |
T |
|
| Q |
442 |
caacaatgtttttgtgtagatccctctg-aatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtt |
540 |
Q |
| |
|
| |||| ||||||||||| ||| |||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
21704842 |
ctgcaatctttttgtgtagttcc-tctggaataagtccggtgttttctatgtattttgctgcccacataagcttgtacttctctcctaacttcagagttg |
21704744 |
T |
|
| Q |
541 |
tattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatctt |
640 |
Q |
| |
|
|||| ||||||||||||||||||| |||| ||| | || | ||||| || |||||| |||| |||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
21704743 |
gattgtcatgatggataggacctatcgacactaacttgggtgagtaatgctgctcaaagttttttctacttctgagatactcttgcaccctttgtatctt |
21704644 |
T |
|
| Q |
641 |
tggccgtg |
648 |
Q |
| |
|
||| |||| |
|
|
| T |
21704643 |
tggtcgtg |
21704636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 142 - 575
Target Start/End: Complemental strand, 21764540 - 21764128
Alignment:
| Q |
142 |
tcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcac |
241 |
Q |
| |
|
|||||| ||||||||||||||||| ||| || |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
21764540 |
tcatgcattttatcaattcactctcgttatt---tttccacaatagcttgagtacttcgtaaggaagttgattctccaacaaaagcacatccatcatcac |
21764444 |
T |
|
| Q |
242 |
aatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatc |
341 |
Q |
| |
|
|| | | |||||| |||||||||| | ||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
21764443 |
aagaaccagttgaccaaccttaatcttcatgtgccct------------------ttctccaagagataaagcaaagagcatccatccacgaacaacatc |
21764362 |
T |
|
| Q |
342 |
cacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttat |
441 |
Q |
| |
|
||||| | |||||||||||| |||| ||||||||| ||||| |||| || || |||| |||||| || |||| |||||||||||| ||| ||||||| |
|
|
| T |
21764361 |
cacgacaacttttcttcaaggctatgaaagccttcaagagactttccagttaaagttaaaacatcatcgctaaaacgacccttcagttcatcgatgttat |
21764262 |
T |
|
| Q |
442 |
caacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtt |
540 |
Q |
| |
|
|| |||| |||| |||||| | ||||| || | | | ||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| | |
|
|
| T |
21764261 |
cagcaatcttttggtgtag-ttcctctggattaagtgcggtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacttcagatctg |
21764163 |
T |
|
| Q |
541 |
tattgccatgatggataggacctattgacatcaac |
575 |
Q |
| |
|
|| |||||||||||||||||||||||| |||| |
|
|
| T |
21764162 |
atctgtcatgatggataggacctattgacaacaac |
21764128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 150 - 641
Target Start/End: Complemental strand, 21746017 - 21745532
Alignment:
| Q |
150 |
tttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatccaccatcacaatagcta |
249 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||| |||||||| |||||| ||||||||||| |||||||| ||||| | |||||||| | | |
|
|
| T |
21746017 |
tttatcaattcactctcgttgttatcttttcacaatagctagagtacttcataaggcagttgattctccaacaaaagtacatcgatcatcacaagaataa |
21745918 |
T |
|
| Q |
250 |
gttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatag |
349 |
Q |
| |
|
| |||||| |||||||| ||| | ||| | ||||| || || |||||||||| |||||||| |||||||| || || ||||||||||| || |
|
|
| T |
21745917 |
ctagatcaagcttaatattcatgtctcgtgggtgaacaa---tg---ttatccaagatatggagcaaagaacatccatctacgaataacatccacgacag |
21745824 |
T |
|
| Q |
350 |
cttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatg |
449 |
Q |
| |
|
|||||||||||| | |||||||||| |||||||||| || || |||| ||||||||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
21745823 |
cttttcttcaaggcattcaaagccttgaagagaatttccagttaaagttaaaacatcgtcgctaaaacgacccttcagttcatcaatgttatcaacaatc |
21745724 |
T |
|
| Q |
450 |
tttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccat |
549 |
Q |
| |
|
|||||||| ||||| || || || || || | || |||||||||||||||||||||||| |||| |||||| |||||||| | |||| ||| |
|
|
| T |
21745723 |
tttttgtgcagatcgtgtggattgtggcctgtattctcgaggtattttgctgcccacataagcttatactcttctcctgtctttagatttggattgtcat |
21745624 |
T |
|
| Q |
550 |
gatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatactcttgcacccttcgtatcttt |
641 |
Q |
| |
|
||||||||||||||| ||||| |||| | || | ||||| ||||||||| ||| ||||||| |||||| ||| ||||||| |||||||| |
|
|
| T |
21745623 |
gatggataggacctaatgacaccaacttgggtgagtaatgcttctcaaaatttgttctatttatgagatggtctaccaccctttgtatcttt |
21745532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 21792497 - 21792385
Alignment:
| Q |
134 |
gaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatcc |
233 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| |
|
|
| T |
21792497 |
gaaattcgtcatgctttctattaatgcactctggttgtcgtctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatcc |
21792398 |
T |
|
| Q |
234 |
accatcacaatag |
246 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
21792397 |
atcatcacaatag |
21792385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 21656950 - 21656895
Alignment:
| Q |
142 |
tcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtact |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
21656950 |
tcatgctttttatcaattcactcttgttgtcatctttccacaatagcttgagtact |
21656895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 134 - 426
Target Start/End: Complemental strand, 25880 - 25588
Alignment:
| Q |
134 |
gaaattcgtcatgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttgataaggaagttgattctctaacaaaagcacatcc |
233 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| || | | |||||||||||||| |||||||| ||||||||||||||| || ||||||| ||||||| |
|
|
| T |
25880 |
gaaatccgtcatgctttgtatcaattcactctcattctcgtttttccacaatagcttgagtacttcataaggaagttgattttccaacaaaaccacatcc |
25781 |
T |
|
| Q |
234 |
accatcacaatagctagttgatcaaccttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccacca |
333 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||| |||||| | | | | ||| | ||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
25780 |
accatcacaagaaaaagttgatcaaccttaatattcattttccctgggttattacgtctggcattctccaagatatgtagcaaagaacatccatccacga |
25681 |
T |
|
| Q |
334 |
acaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttacaacatcgtcatcaaaatgacccttca |
426 |
Q |
| |
|
|||||||| |||| |||||||||||||| || |||||||||| ||||| ||| | || || |||| |||||| || |||||||||||||| |
|
|
| T |
25680 |
acaacatcaacgacagcttttcttcaagggtaccaaagccttcaagagactttttagttaaagttaaaacatcctcgctaaaatgacccttca |
25588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 479 - 575
Target Start/End: Complemental strand, 25472 - 25376
Alignment:
| Q |
479 |
agtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaac |
575 |
Q |
| |
|
|||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
25472 |
agtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacttcagatttttattgtcatgatggataggacctattgacaccaac |
25376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 314 - 376
Target Start/End: Original strand, 18192060 - 18192122
Alignment:
| Q |
314 |
caaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttc |
376 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||| |
|
|
| T |
18192060 |
caaagaacatccatccacaaacaacatccatgatagcttttcttccaagttatcaaagccttc |
18192122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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