View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3546_low_27 (Length: 399)

Name: NF3546_low_27
Description: NF3546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3546_low_27
NF3546_low_27
[»] chr3 (58 HSPs)
chr3 (18-389)||(19609088-19609460)
chr3 (52-186)||(19611902-19612035)
chr3 (24-193)||(37695625-37695795)
chr3 (24-193)||(1778629-1778797)
chr3 (26-178)||(24569062-24569214)
chr3 (66-192)||(36476571-36476697)
chr3 (66-193)||(3901151-3901278)
chr3 (23-193)||(30190619-30190789)
chr3 (72-189)||(28690790-28690907)
chr3 (25-190)||(51837920-51838085)
chr3 (24-190)||(8679014-8679180)
chr3 (66-192)||(37311937-37312063)
chr3 (66-193)||(29023968-29024094)
chr3 (24-190)||(44301551-44301717)
chr3 (66-180)||(45710849-45710963)
chr3 (25-193)||(10366603-10366778)
chr3 (24-193)||(37497478-37497647)
chr3 (66-190)||(36460418-36460542)
chr3 (25-193)||(37772925-37773093)
chr3 (66-190)||(43253865-43253989)
chr3 (71-193)||(5322944-5323066)
chr3 (27-193)||(19822997-19823163)
chr3 (80-193)||(39043770-39043886)
chr3 (40-193)||(14194542-14194694)
chr3 (72-160)||(54477467-54477555)
chr3 (66-193)||(54726471-54726598)
chr3 (64-190)||(12736572-12736698)
chr3 (25-190)||(11632070-11632234)
chr3 (28-177)||(38795346-38795495)
chr3 (46-186)||(27471328-27471468)
chr3 (66-193)||(11905808-11905935)
chr3 (66-180)||(23004384-23004498)
chr3 (72-190)||(34750485-34750603)
chr3 (71-125)||(49830183-49830237)
chr3 (18-180)||(52290892-52291054)
chr3 (69-190)||(12904853-12904975)
chr3 (32-117)||(45811717-45811802)
chr3 (64-180)||(30682066-30682182)
chr3 (66-174)||(43719272-43719379)
chr3 (66-126)||(52206849-52206909)
chr3 (327-389)||(19611694-19611756)
chr3 (24-106)||(33491043-33491125)
chr3 (25-190)||(40462308-40462466)
chr3 (39-193)||(3313240-3313390)
chr3 (67-180)||(34957502-34957615)
chr3 (18-107)||(51064772-51064861)
chr3 (58-134)||(29595721-29595797)
chr3 (72-180)||(30711072-30711180)
chr3 (28-164)||(38512040-38512176)
chr3 (89-180)||(38705174-38705267)
chr3 (72-190)||(49447802-49447917)
chr3 (24-192)||(17652739-17652903)
chr3 (24-190)||(38137403-38137572)
chr3 (66-115)||(7757591-7757640)
chr3 (100-173)||(48541036-48541109)
chr3 (46-123)||(50035199-50035276)
chr3 (86-114)||(25108547-25108575)
chr3 (71-123)||(31158528-31158580)
[»] chr4 (73 HSPs)
chr4 (31-190)||(49175907-49176066)
chr4 (24-193)||(461944-462113)
chr4 (24-193)||(38405068-38405237)
chr4 (24-193)||(49428308-49428477)
chr4 (33-193)||(42616878-42617038)
chr4 (24-189)||(52247394-52247559)
chr4 (66-181)||(11288638-11288752)
chr4 (38-193)||(54506774-54506929)
chr4 (24-193)||(2653406-2653573)
chr4 (24-193)||(5841393-5841563)
chr4 (24-190)||(17237262-17237428)
chr4 (83-193)||(22130029-22130139)
chr4 (18-180)||(32884800-32884962)
chr4 (24-189)||(36985776-36985941)
chr4 (66-190)||(47464373-47464497)
chr4 (30-190)||(53412097-53412257)
chr4 (26-193)||(33790699-33790866)
chr4 (72-190)||(34360644-34360762)
chr4 (66-193)||(11907607-11907734)
chr4 (66-193)||(35380341-35380468)
chr4 (24-175)||(52859765-52859916)
chr4 (24-125)||(35251943-35252044)
chr4 (66-190)||(6643668-6643792)
chr4 (66-190)||(7061672-7061796)
chr4 (66-190)||(35311231-35311355)
chr4 (39-179)||(53346759-53346899)
chr4 (66-193)||(6609747-6609874)
chr4 (66-193)||(21240712-21240839)
chr4 (66-193)||(30682204-30682331)
chr4 (30-132)||(27880214-27880315)
chr4 (24-190)||(43237232-43237398)
chr4 (73-190)||(16821346-16821463)
chr4 (64-145)||(30192239-30192320)
chr4 (24-193)||(28500857-28501018)
chr4 (66-134)||(42517646-42517714)
chr4 (66-193)||(17114426-17114553)
chr4 (66-193)||(47773027-47773154)
chr4 (82-193)||(50264104-50264215)
chr4 (28-134)||(32469918-32470024)
chr4 (66-144)||(46396891-46396969)
chr4 (33-193)||(2066775-2066935)
chr4 (82-193)||(26147639-26147751)
chr4 (27-123)||(51625139-51625235)
chr4 (27-130)||(8175549-8175652)
chr4 (66-193)||(38502490-38502617)
chr4 (72-180)||(41711470-41711578)
chr4 (87-190)||(18741503-18741606)
chr4 (66-116)||(13016639-13016689)
chr4 (71-193)||(49746947-49747069)
chr4 (72-193)||(3689548-3689669)
chr4 (39-180)||(40122835-40122976)
chr4 (66-142)||(5618579-5618655)
chr4 (66-190)||(44536204-44536327)
chr4 (24-190)||(2942611-2942776)
chr4 (27-93)||(3669965-3670031)
chr4 (66-119)||(21325172-21325225)
chr4 (67-180)||(47358958-47359071)
chr4 (71-139)||(3098758-3098826)
chr4 (24-144)||(4972595-4972715)
chr4 (56-116)||(25869842-25869902)
chr4 (141-193)||(31370383-31370435)
chr4 (66-105)||(34321719-34321758)
chr4 (65-124)||(39397399-39397458)
chr4 (71-125)||(17512352-17512406)
chr4 (66-176)||(19265811-19265921)
chr4 (201-238)||(19265739-19265776)
chr4 (72-181)||(25233179-25233288)
chr4 (67-144)||(29575143-29575220)
chr4 (66-134)||(11024898-11024966)
chr4 (201-233)||(26147769-26147801)
chr4 (66-190)||(35998801-35998924)
chr4 (73-180)||(43902250-43902360)
chr4 (66-134)||(46385520-46385587)
[»] chr5 (47 HSPs)
chr5 (26-193)||(27542781-27542948)
chr5 (72-193)||(27580586-27580707)
chr5 (38-193)||(1248576-1248731)
chr5 (24-193)||(7827884-7828053)
chr5 (72-193)||(8725015-8725136)
chr5 (72-193)||(21060616-21060737)
chr5 (24-149)||(38508145-38508270)
chr5 (66-193)||(6315777-6315904)
chr5 (39-190)||(31655042-31655193)
chr5 (46-192)||(37184059-37184205)
chr5 (67-180)||(6754028-6754140)
chr5 (66-190)||(40530224-40530348)
chr5 (71-190)||(4441010-4441129)
chr5 (66-193)||(6753659-6753785)
chr5 (24-139)||(32440181-32440296)
chr5 (66-193)||(40899904-40900031)
chr5 (68-180)||(11796169-11796281)
chr5 (66-190)||(29374331-29374455)
chr5 (39-190)||(2232046-2232193)
chr5 (72-190)||(8698298-8698416)
chr5 (24-134)||(9515791-9515901)
chr5 (65-192)||(15439318-15439444)
chr5 (24-190)||(4818540-4818706)
chr5 (66-190)||(41496069-41496193)
chr5 (66-193)||(19929932-19930059)
chr5 (66-180)||(30512685-30512800)
chr5 (66-180)||(30553025-30553140)
chr5 (72-190)||(6615886-6616003)
chr5 (65-176)||(11904208-11904320)
chr5 (62-134)||(18890551-18890623)
chr5 (64-190)||(41478816-41478942)
chr5 (86-160)||(29856066-29856140)
chr5 (66-186)||(26285478-26285598)
chr5 (33-93)||(42922834-42922894)
chr5 (39-190)||(29570381-29570532)
chr5 (94-169)||(38161440-38161515)
chr5 (64-190)||(41492291-41492417)
chr5 (76-190)||(22848394-22848508)
chr5 (62-107)||(3076662-3076707)
chr5 (64-117)||(18841541-18841594)
chr5 (24-107)||(843509-843592)
chr5 (66-144)||(5129232-5129310)
chr5 (38-183)||(39325859-39326002)
chr5 (72-190)||(42803626-42803744)
chr5 (66-107)||(15818480-15818521)
chr5 (64-124)||(5282397-5282457)
chr5 (66-110)||(16181763-16181807)
[»] chr2 (50 HSPs)
chr2 (24-190)||(17695319-17695485)
chr2 (18-193)||(37322414-37322590)
chr2 (25-193)||(39691476-39691644)
chr2 (66-193)||(14523372-14523499)
chr2 (24-180)||(45235580-45235736)
chr2 (18-190)||(16377608-16377784)
chr2 (66-193)||(8947052-8947179)
chr2 (66-193)||(43410412-43410539)
chr2 (32-125)||(19937731-19937824)
chr2 (24-193)||(36354401-36354570)
chr2 (25-193)||(16463675-16463843)
chr2 (66-190)||(35313876-35314000)
chr2 (66-193)||(15359087-15359214)
chr2 (18-178)||(41220897-41221058)
chr2 (72-180)||(16805880-16805988)
chr2 (72-180)||(16845161-16845269)
chr2 (66-193)||(34120439-34120564)
chr2 (87-181)||(17346383-17346477)
chr2 (64-190)||(35242295-35242421)
chr2 (24-193)||(36794270-36794439)
chr2 (72-193)||(43115808-43115929)
chr2 (24-180)||(18853158-18853315)
chr2 (18-190)||(5789600-5789772)
chr2 (67-180)||(39329663-39329777)
chr2 (66-193)||(39785571-39785701)
chr2 (122-193)||(19937371-19937442)
chr2 (46-181)||(28186212-28186346)
chr2 (67-193)||(25637467-25637593)
chr2 (24-114)||(27501496-27501586)
chr2 (66-190)||(43699599-43699720)
chr2 (71-144)||(1206708-1206781)
chr2 (66-106)||(26607968-26608008)
chr2 (72-123)||(43730669-43730720)
chr2 (71-117)||(3323291-3323337)
chr2 (38-180)||(31448665-31448807)
chr2 (66-180)||(32831175-32831289)
chr2 (72-118)||(43730491-43730537)
chr2 (66-123)||(32783420-32783477)
chr2 (141-193)||(7494913-7494965)
chr2 (67-118)||(11367140-11367191)
chr2 (52-103)||(15435447-15435498)
chr2 (95-193)||(19444132-19444230)
chr2 (67-140)||(10005125-10005198)
chr2 (129-190)||(26863421-26863482)
chr2 (207-260)||(27501633-27501685)
chr2 (64-153)||(27866518-27866606)
chr2 (201-238)||(43410359-43410396)
chr2 (71-111)||(12520855-12520895)
chr2 (72-167)||(19426467-19426563)
chr2 (101-193)||(26608178-26608270)
[»] chr8 (52 HSPs)
chr8 (33-180)||(31271020-31271167)
chr8 (28-190)||(4428317-4428478)
chr8 (22-190)||(45425625-45425793)
chr8 (24-177)||(21216062-21216215)
chr8 (65-193)||(5053155-5053283)
chr8 (24-192)||(10179908-10180076)
chr8 (26-193)||(17719221-17719388)
chr8 (24-190)||(11976897-11977063)
chr8 (24-193)||(32476273-32476442)
chr8 (66-180)||(9300116-9300230)
chr8 (72-178)||(44761503-44761609)
chr8 (24-192)||(39482602-39482770)
chr8 (66-181)||(10097994-10098109)
chr8 (24-134)||(7703117-7703227)
chr8 (66-180)||(34948690-34948804)
chr8 (75-189)||(42886990-42887104)
chr8 (22-187)||(27294018-27294183)
chr8 (66-193)||(396614-396741)
chr8 (66-193)||(31231716-31231843)
chr8 (28-190)||(7172903-7173065)
chr8 (76-145)||(41092028-41092097)
chr8 (39-123)||(39300917-39301001)
chr8 (66-134)||(42972511-42972579)
chr8 (77-180)||(36006901-36007004)
chr8 (39-145)||(1875568-1875674)
chr8 (24-123)||(51169-51267)
chr8 (66-193)||(13335202-13335329)
chr8 (39-190)||(17823910-17824060)
chr8 (33-123)||(36967417-36967507)
chr8 (53-118)||(5356660-5356725)
chr8 (71-139)||(40028556-40028624)
chr8 (66-193)||(26626115-26626242)
chr8 (72-134)||(12559638-12559700)
chr8 (201-234)||(2767443-2767476)
chr8 (71-152)||(44648540-44648621)
chr8 (47-107)||(1739712-1739772)
chr8 (66-150)||(2767294-2767378)
chr8 (64-144)||(4924068-4924148)
chr8 (65-145)||(31331442-31331522)
chr8 (109-180)||(1739542-1739613)
chr8 (66-193)||(22771838-22771965)
chr8 (127-193)||(29226592-29226658)
chr8 (46-112)||(39329086-39329152)
chr8 (66-180)||(40996368-40996482)
chr8 (66-107)||(6611769-6611810)
chr8 (24-117)||(6796006-6796099)
chr8 (66-123)||(15809985-15810042)
chr8 (66-107)||(29226234-29226275)
chr8 (66-123)||(34393957-34394014)
chr8 (66-118)||(10953411-10953463)
chr8 (66-118)||(10961416-10961468)
chr8 (201-233)||(36007035-36007067)
[»] chr1 (71 HSPs)
chr1 (24-190)||(39864100-39864266)
chr1 (28-193)||(26093380-26093545)
chr1 (66-189)||(8896337-8896460)
chr1 (27-193)||(6160425-6160591)
chr1 (24-193)||(31978615-31978784)
chr1 (66-193)||(7759201-7759328)
chr1 (64-193)||(36701907-36702036)
chr1 (64-193)||(36718011-36718140)
chr1 (24-193)||(2572455-2572623)
chr1 (20-193)||(30754900-30755073)
chr1 (28-177)||(32970534-32970683)
chr1 (66-190)||(9307616-9307740)
chr1 (24-193)||(34031489-34031659)
chr1 (66-193)||(40144852-40144979)
chr1 (64-178)||(29074885-29074999)
chr1 (19-193)||(33733221-33733394)
chr1 (67-193)||(49223992-49224118)
chr1 (71-180)||(15699121-15699230)
chr1 (18-193)||(917010-917185)
chr1 (39-190)||(12039071-12039222)
chr1 (66-193)||(16395052-16395178)
chr1 (66-193)||(20209845-20209972)
chr1 (27-186)||(41080593-41080750)
chr1 (24-190)||(24991616-24991782)
chr1 (24-181)||(31042795-31042952)
chr1 (22-157)||(3312133-3312268)
chr1 (72-192)||(13579632-13579752)
chr1 (25-193)||(38787327-38787495)
chr1 (72-178)||(24880874-24880983)
chr1 (72-193)||(9379217-9379339)
chr1 (66-192)||(10495826-10495951)
chr1 (52-192)||(44761522-44761662)
chr1 (82-193)||(7351622-7351733)
chr1 (41-160)||(12151195-12151314)
chr1 (66-193)||(37276447-37276574)
chr1 (66-172)||(5179404-5179510)
chr1 (52-190)||(27896944-27897082)
chr1 (18-190)||(3260580-3260748)
chr1 (77-190)||(14757610-14757723)
chr1 (46-123)||(28749047-28749124)
chr1 (66-134)||(23168998-23169066)
chr1 (66-118)||(27687302-27687354)
chr1 (64-144)||(35538678-35538758)
chr1 (91-190)||(22856267-22856366)
chr1 (95-189)||(32219695-32219790)
chr1 (90-180)||(29778425-29778515)
chr1 (26-127)||(6267821-6267922)
chr1 (66-123)||(22181392-22181449)
chr1 (72-193)||(52429330-52429451)
chr1 (22-110)||(11449952-11450040)
chr1 (66-193)||(37506110-37506240)
chr1 (66-118)||(42410055-42410107)
chr1 (72-175)||(6023660-6023763)
chr1 (64-144)||(17988561-17988643)
chr1 (66-192)||(4441608-4441734)
chr1 (59-105)||(4659831-4659877)
chr1 (72-190)||(44707771-44707889)
chr1 (66-144)||(45331376-45331454)
chr1 (120-193)||(2137428-2137501)
chr1 (72-153)||(41121836-41121917)
chr1 (64-125)||(43614451-43614512)
chr1 (66-105)||(978862-978901)
chr1 (131-190)||(6785245-6785304)
chr1 (128-190)||(35367791-35367853)
chr1 (95-193)||(52837266-52837364)
chr1 (66-107)||(35367650-35367691)
chr1 (87-116)||(39395018-39395047)
chr1 (155-188)||(39887826-39887859)
chr1 (201-245)||(29074806-29074850)
chr1 (63-107)||(31154200-31154244)
chr1 (201-233)||(49224134-49224166)
[»] chr7 (52 HSPs)
chr7 (24-193)||(83378-83547)
chr7 (22-190)||(26974022-26974193)
chr7 (24-193)||(34947493-34947662)
chr7 (66-193)||(759100-759227)
chr7 (24-191)||(9785983-9786150)
chr7 (72-193)||(30865960-30866081)
chr7 (66-181)||(24516298-24516413)
chr7 (66-193)||(28202318-28202445)
chr7 (66-193)||(38391741-38391868)
chr7 (66-190)||(41506074-41506198)
chr7 (46-193)||(3178193-3178340)
chr7 (27-190)||(16904375-16904538)
chr7 (66-193)||(17828360-17828486)
chr7 (66-193)||(21390288-21390415)
chr7 (82-193)||(32346077-32346188)
chr7 (46-192)||(49101657-49101806)
chr7 (72-190)||(22738697-22738815)
chr7 (24-190)||(28103729-28103895)
chr7 (24-190)||(34100514-34100680)
chr7 (77-190)||(23670482-23670595)
chr7 (72-193)||(43873916-43874037)
chr7 (66-190)||(11373437-11373561)
chr7 (66-190)||(33819210-33819334)
chr7 (66-181)||(7463218-7463333)
chr7 (66-180)||(13961965-13962079)
chr7 (39-176)||(21759966-21760103)
chr7 (27-180)||(32018682-32018835)
chr7 (51-180)||(32018909-32019039)
chr7 (24-125)||(2850848-2850949)
chr7 (18-190)||(8592401-8592573)
chr7 (66-150)||(42935697-42935781)
chr7 (66-193)||(27920981-27921108)
chr7 (24-123)||(44180268-44180367)
chr7 (66-190)||(2459467-2459589)
chr7 (66-190)||(5524373-5524500)
chr7 (77-190)||(21350645-21350758)
chr7 (66-190)||(7457430-7457554)
chr7 (66-190)||(19271742-19271866)
chr7 (66-190)||(29835423-29835546)
chr7 (82-178)||(35333051-35333147)
chr7 (67-190)||(37245686-37245808)
chr7 (71-180)||(31665730-31665840)
chr7 (72-190)||(46478308-46478426)
chr7 (24-117)||(19060368-19060461)
chr7 (109-192)||(25571413-25571496)
chr7 (85-139)||(39452391-39452445)
chr7 (83-180)||(31930523-31930622)
chr7 (86-193)||(6494963-6495070)
chr7 (64-123)||(39308649-39308708)
chr7 (72-180)||(40076324-40076429)
chr7 (86-134)||(17610567-17610615)
chr7 (66-118)||(30107184-30107236)
[»] scaffold0330 (1 HSPs)
scaffold0330 (28-187)||(5382-5541)
[»] chr6 (31 HSPs)
chr6 (24-190)||(31894169-31894335)
chr6 (66-193)||(29363292-29363419)
chr6 (66-193)||(13087516-13087643)
chr6 (66-193)||(1955980-1956106)
chr6 (66-193)||(11655947-11656074)
chr6 (30-189)||(1063568-1063727)
chr6 (27-190)||(7920228-7920390)
chr6 (66-193)||(13909410-13909537)
chr6 (46-192)||(1225035-1225180)
chr6 (27-193)||(3291730-3291896)
chr6 (66-180)||(24983450-24983564)
chr6 (66-179)||(5302351-5302464)
chr6 (28-193)||(6801917-6802082)
chr6 (24-180)||(17828939-17829094)
chr6 (39-190)||(15058106-15058257)
chr6 (66-177)||(23142669-23142780)
chr6 (40-118)||(7072221-7072299)
chr6 (25-190)||(3720201-3720366)
chr6 (24-193)||(32440604-32440773)
chr6 (66-190)||(1781793-1781915)
chr6 (70-134)||(4581986-4582050)
chr6 (66-193)||(30716886-30717013)
chr6 (66-193)||(21010159-21010290)
chr6 (77-190)||(181545-181658)
chr6 (77-134)||(4590610-4590667)
chr6 (129-190)||(34657626-34657687)
chr6 (73-180)||(15582282-15582389)
chr6 (53-180)||(34299994-34300121)
chr6 (66-144)||(25417966-25418044)
chr6 (66-123)||(6834370-6834427)
chr6 (290-342)||(14637831-14637883)
[»] scaffold0012 (1 HSPs)
scaffold0012 (46-193)||(105670-105817)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-190)||(135997-136163)
[»] scaffold0583 (1 HSPs)
scaffold0583 (66-193)||(2011-2138)
[»] scaffold0110 (1 HSPs)
scaffold0110 (66-193)||(1690-1817)
[»] scaffold0294 (1 HSPs)
scaffold0294 (39-117)||(17097-17175)
[»] scaffold0328 (1 HSPs)
scaffold0328 (66-193)||(7983-8110)
[»] scaffold0302 (1 HSPs)
scaffold0302 (24-180)||(16097-16253)
[»] scaffold0159 (1 HSPs)
scaffold0159 (18-190)||(33973-34145)
[»] scaffold0182 (1 HSPs)
scaffold0182 (72-191)||(20361-20480)
[»] scaffold0011 (1 HSPs)
scaffold0011 (64-190)||(14170-14294)
[»] scaffold1809 (1 HSPs)
scaffold1809 (77-190)||(697-810)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-107)||(252491-252572)
[»] scaffold1391 (1 HSPs)
scaffold1391 (66-123)||(1819-1876)
[»] scaffold0470 (1 HSPs)
scaffold0470 (66-107)||(1057-1098)


Alignment Details
Target: chr3 (Bit Score: 279; Significance: 1e-156; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 389
Target Start/End: Complemental strand, 19609460 - 19609088
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19609460 acttcttccgtctcaaaataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaattaatatcattta 19609361  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatgnnnnnnntgttgtattagtattct 217  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||    
T  19609360 caaaaatattcttattacttgttgttagtggagtagataagtttgataaaattcaataaataaatgtataataatgaaaaaaatgttgtattagtgttct 19609261  T
Q  218 aaagtgacaattatttcaaaacagaaaagaa-aaatattaaagagaccgnnnnnnnagacagagagagtatcttttttctaatgaaggaaatccagcaaa 316  Q
    ||||||| |||||||| ||||||||||| || | |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  19609260 aaagtgataattattttaaaacagaaaaaaatatatattaaagagaccgttttttgagacagagagagtatcttttttctaatgaaggaaatccagcaaa 19609161  T
Q  317 agcgactttaaaaatatgatgtgaaaatcttttggagcaacttttgggagctatatttacttgtgcacctttg 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19609160 agcgactttaaaaatatgatgtgaaaatcttttggagcaacttttggaagctatatttacttgtgcacctttg 19609088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 19612035 - 19611902
Alignment:
Q  52 tttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagt 151  Q
    |||||||| || |||||||||| |||||| ||||||||||||||||| |||||||| ||| |||||| ||||||| ||||||| |||||||||| |||||    
T  19612035 tttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta-tataatttactaaaatatccttattaattgttgttagtggagt 19611937  T
Q  152 agataagtttgataaaattcaataaataaatgtat 186  Q
    || |||||||||| |||||||||||||||||||||    
T  19611936 agttaagtttgatgaaattcaataaataaatgtat 19611902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 37695625 - 37695795
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagattt-gtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaa 122  Q
    |||||||| |||| ||||||| ||||| ||| ||| | || | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  37695625 tccgtctctaaataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaa 37695724  T
Q  123 atattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    | |  ||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  |||||||||||    
T  37695725 acacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatg 37695795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 1778797 - 1778629
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||| |||||| |||| | ||||| ||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||    
T  1778797 tccgtctcacaatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaattaatgacatttactaaaa 1778698  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     || ||||||| |||| ||||| |||||||||||||| ||| |||||||||||||||  |||||||||||    
T  1778697 catccttatta-ttgtagttagtggagtagataagttggatgaaattcaataaataagggtataataatg 1778629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 24569062 - 24569214
Alignment:
Q  26 cgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    |||||| |||| ||||||||||||||||| || | || | ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  24569062 cgtctctaaattatagtcgcttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaata 24569161  T
Q  126 ttcttattacttgttgttagcggagtagataagtttgataaaattcaataaat 178  Q
      ||||||| |||| ||||| ||||||| ||||||  || ||||||| |||||    
T  24569162 cccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaat 24569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 36476697 - 36476571
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||| ||||||  ||||||| |||| |||||  |||||| ||||||||||     
T  36476697 ttaagaaaataattgattgtgttgattgcaatggtaaaattaatatcatttactaaaatacccttattaattgtagttagtagagtagttaagtttgatg 36476598  T
Q  166 aaattcaataaataaatgtataataat 192  Q
    |||||||||||||||  ||||||||||    
T  36476597 aaattcaataaataagggtataataat 36476571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 3901151 - 3901278
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||||||||||| |||| |||||||||| |||| ||||| || |||  |||||| |||     
T  3901151 ttaagaaaatgattaattgtattaatttcaatgataaaattaatatcatttactaaaacattcttattagttgtagttagtggggtacttaagttggatg 3901250  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  3901251 aaattcaataaataagggtataataatg 3901278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 30190619 - 30190789
Alignment:
Q  23 ttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaa 122  Q
    ||||||||| |||  ||||||| ||||| |||||| | |  | | ||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||    
T  30190619 ttccgtctctaaaaaatagtcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaa 30190718  T
Q  123 atattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||  ||||||| |||| ||||| ||||||| |||||| ||| ||||||||| |||||  ||| |||||||    
T  30190719 atacccttattaattgtagttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatg 30190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 28690790 - 28690907
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||| |||| ||||| |   ||| |||||| ||| ||||||    
T  28690790 aaatgattaattgtgttgatttcaacggtaaaattaatatcatttactaaaatatctttattaattgtagttagtgagatagttaagttggatgaaattc 28690889  T
Q  172 aataaataaatgtataat 189  Q
    ||||||||||||||||||    
T  28690890 aataaataaatgtataat 28690907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 51837920 - 51838085
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||| |||| ||||||  ||||| |||||| |||| | ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  51837920 ccgtctctaaattatagtcatttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaat 51838019  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |  ||||||| |||| | ||| ||||||| || |||  || ||||||| |||||||  ||||||||    
T  51838020 acccttattagttgtagctagtggagtagttacgttgaatgaaattcattaaataagggtataata 51838085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 8679014 - 8679180
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||||||| || | || | ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  8679014 tccgtctctaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 8679113  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     || ||||||| || | ||||| | | ||  |||||| ||| |||||||||||||||  ||||||||    
T  8679114 gatccttattaattatagttagtgaattaattaagttggatgaaattcaataaataagggtataata 8679180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 37312063 - 37311937
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||||| ||| ||| ||     
T  37312063 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaacccttattaattgtagttagtggagtagttaaatttaatg 37311964  T
Q  166 aaattcaataaataaatgtataataat 192  Q
    |||||||||||||||  ||||||||||    
T  37311963 aaattcaataaataagagtataataat 37311937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 29023968 - 29024094
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| ||||||||||||  |||||||||||| |||||||||| |||| | |||||||| |||| ||||| ||||||  |||||| |||     
T  29023968 ttaaaaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca-tcttattaattgtagttagtggagtaattaagttggatg 29024066  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  29024067 aaattcaataaataatggtataataatg 29024094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 44301717 - 44301551
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| || |||| ||||| ||||||   || ||||||| ||||  ||| || |||||||||||||| |||||||| |||||||||| ||||    
T  44301717 tccgtctcaaaataatggtcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatgataaaattagtatcatttactaaaa 44301618  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||  ||||| | ||||  |||| ||||||| |||||| ||| |||||||||||||||  ||||||||    
T  44301617 tacccttatcaattgtaattagtggagtagttaagttggatgaaattcaataaataagagtataata 44301551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 45710963 - 45710849
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || |||||||||  ||||||||||||||||||||||| |||| | | |||||| |||| ||||| ||||||| |||||| |||     
T  45710963 ttaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacacttttattaattgtagttagtggagtagttaagttggatg 45710864  T
Q  166 aaattcaataaataa 180  Q
    || ||||||||||||    
T  45710863 aagttcaataaataa 45710849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 10366603 - 10366778
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||| |||| | ||||| ||||| |||||| | || | ||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||     
T  10366603 ccgtctctaaataacagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaac 10366702  T
Q  125 attc-------ttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    | ||       |||||| |||| ||||| | ||||| |||||| ||| |||||||||||||||  |||||||||||    
T  10366703 actcttattaattattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatg 10366778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 37497647 - 37497478
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||| ||| ||||||||| || | || | ||||| ||||||||  ||||||||||||  |||||||||||| |||||||||| ||||    
T  37497647 tccgtctctaaataataatcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtatcatttactaaaa 37497548  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     |   || |||  ||| ||||| ||||||| |||||| ||| |||||||||||||||| |||||||||||    
T  37497547 caccgttgttaactgtagttagtggagtagttaagttggatgaaattcaataaataaacgtataataatg 37497478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 36460418 - 36460542
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||| |||| ||||||| |||||||| ||||||||| || ||||||  ||||||||||||||| |||| ||||  ||||||  |||||| |||     
T  36460418 ttaagaaaattattaattgtgttaatttcaatagtaaaattagtaacatttattaaaatattcttattaattgtagttaatggagtaattaagttggatg 36460517  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  36460518 aaattcaataaataagggtataata 36460542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 37772925 - 37773093
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||| | || |||| || ||||| |||||| |||| | ||||| ||||||||| |||| |||||| ||||||||||||||||||||||||| |||||    
T  37772925 ccgtctctatattatagccgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaat 37773024  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |  ||||||| || | || || ||| ||| ||||||  || ||||||| |||||||  |||||||||||    
T  37773025 acccttattaattatagtcagtggaatagttaagttgaatgaaattcattaaataagggtataataatg 37773093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 43253865 - 43253989
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||||| |||||  |||     
T  43253865 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagtgggatg 43253964  T
Q  166 aaattcaataaataaatgtataata 190  Q
    ||||||| |||||||  ||||||||    
T  43253965 aaattcattaaataagggtataata 43253989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 5322944 - 5323066
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaatt 170  Q
    |||||||||| || ||||||||||| || ||||||||||||||||||| ||||||  ||||||| || |  ||||   ||||| |||||||||| |||||    
T  5322944 aaaatgattaattatgttgatttcagtgataaaattaatatcatttactaaaatacacttattaattataattagtaaagtagttaagtttgatgaaatt 5323043  T
Q  171 caataaataaatgtataataatg 193  Q
    ||||||||||  |||||||||||    
T  5323044 caataaataagggtataataatg 5323066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 19823163 - 19822997
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    ||||| |||| ||||| | ||||| |||||| | || | ||||| ||||||||| ||||||||||||  |||||| ||||| |||||||||| |||| |     
T  19823163 gtctctaaattatagttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtatcatttactaaaacac 19823064  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     ||||||| |||| ||||| ||| ||| |||||| ||| |||||||||||||||  ||||| |||||    
T  19823063 ccttattaattgtagttagtggaatagttaagttggatgaaattcaataaataagggtatattaatg 19822997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 39043770 - 39043886
Alignment:
Q  80 atttgtgttgatttcaatggtaaaattaata---tcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||||||||||||||||||||||||||||||   |||||||| ||||||   |||||| |||| ||||| ||||||| ||||||  || |||||||||||    
T  39043770 atttgtgttgatttcaatggtaaaattaatagtatcatttactaaaatacctttattaattgtagttagtggagtagttaagttgaatgaaattcaataa 39043869  T
Q  177 ataaatgtataataatg 193  Q
    ||||  |||||||||||    
T  39043870 ataagggtataataatg 39043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 14194694 - 14194542
Alignment:
Q  40 agtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgt 139  Q
    ||||| ||||| |||||| | || ||||||  ||||||| | ||||||||||||||||| |||||||| || ||||||| |||||| | |||| | |||     
T  14194694 agtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtaccatttactaaaatacttttatgaattg- 14194596  T
Q  140 tgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||||| ||||||  |||||| ||| ||||||||| |||||| |||||||||||    
T  14194595 tgttagtggagtaattaagttggatgaaattcaattaataaaggtataataatg 14194542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 54477467 - 54477555
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtt 160  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||| ||||  ||||||| ||||||    
T  54477467 aaatggttaattgtgttgattttaatggtaaaattaatatcatttactaaaatatttttattaattgtagttaatggagtagttaagtt 54477555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 54726598 - 54726471
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||||||||  |||||||||||  ||||||||||||||||||||||| |||| ||  |||||| |||| ||||  ||||||| |||||| |||     
T  54726598 ttaagaaaatgattaaatgtgttgattttgatggtaaaattaatatcatttactaaaacatctttattaattgtagttaatggagtagttaagttagatg 54726499  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || || |||||||||  |||| ||||||    
T  54726498 aagtttaataaataagggtattataatg 54726471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 12736572 - 12736698
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    ||||||| ||||||||| |||||||||||  |||| |||||||| |||||||||| | ||||  ||||||| ||||  |||| | ||||| ||| || ||    
T  12736572 ttttaaggaaatgattaattgtgttgattctaatgataaaattagtatcatttactacaatacccttattaattgtacttagtgtagtagttaatttgga 12736671  T
Q  164 taaaattcaataaataaatgtataata 190  Q
    |||||||||||||||||  ||||||||    
T  12736672 taaaattcaataaataagggtataata 12736698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 11632234 - 11632070
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    |||||||| |||  |||||  |||||||||||| | || | |||| |||||||||| ||||||||||||||| |||||||||| ||  |||||| ||||     
T  11632234 ccgtctcataatattagtcatttaagatttgtgcacgattattaa-aaaatgattaattgtgttgatttcaacggtaaaattagtagtatttactaaaac 11632136  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |   |||||| |||| ||||| |||  || |||||| ||| |||||||||||||||| ||||||||    
T  11632135 acctttattaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataata 11632070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 38795495 - 38795346
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    ||||||||| ||||||| ||||  |||||| | ||  |||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||  ||||       
T  38795495 tctcaaaataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcatttacccaaatgcc 38795396  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaa 177  Q
    ||||||| |||| ||| | ||||| | |||||| ||| ||||| ||||||    
T  38795395 cttattaattgtagttggtggagttgttaagttggatgaaatttaataaa 38795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 27471468 - 27471328
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    |||||||||||| | || | ||||||||||||||| || |||||||||||||||| |||||| |  ||||||| |||| | |||||||| || |   |||    
T  27471468 ttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagttgcatttactaaaacactcttattaattataagtag 27471369  T
Q  146 cggagtagataagtttgataaaattcaataaataaatgtat 186  Q
     ||||||| ||||||  || |||||||||||||||| ||||    
T  27471368 tggagtagttaagttgaatgaaattcaataaataaaggtat 27471328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 11905935 - 11905808
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||| ||||  ||| |||||||| |||||||||| |||  |  ||||||| |||| ||||  ||||| | |||||| |||     
T  11905935 ttaagaaaatgattaattgtgttaattttgatgataaaattagtatcatttactaaagcacccttattaattgtagttaatggagttgttaagttggatg 11905836  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||||||||||  ||||||||||    
T  11905835 aaattcaataaataaagatataataatg 11905808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 23004384 - 23004498
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| ||  || ||| |||| |  ||||||| |||| ||||| ||||||| ||||||  ||     
T  23004384 ttaaggaaatgattaattgtgtcgatttcaatggtaaaattagtagtatatactaaaacacccttattaattgtagttagtggagtagttaagttgtatg 23004483  T
Q  166 aaattcaataaataa 180  Q
    |||||||||||||||    
T  23004484 aaattcaataaataa 23004498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 34750603 - 34750485
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||  |||||||||||| ||||||||||||| |||||||||| |||| || ||||||| |||| ||| | ||||||| ||| || ||| ||| |     
T  34750603 aaatgattgattgtgttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagttggtggagtagttaacttggatgaaaatt 34750504  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  34750503 aataaataatggtataata 34750485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 49830237 - 49830183
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  49830237 aaaatgattaattgtgttgatttcaatagtaaaattaatatcatttactaaaata 49830183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 52291054 - 52290892
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||||||||||||| |||| ||| ||| ||||| ||  |||| |  | ||||||||||||||| |||| |||||||  |||||||||||| || ||||||    
T  52291054 acttcttccgtctctaaataataatcgtttaaggttgatgtacggttattaagaaaatgattaattgtattgattttgatggtaaaattagtaccattta 52290955  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
      |||| |  ||||||| || | ||||| ||||||| ||||||  ||||| ||||||||||||    
T  52290954 ttaaaacagccttattaattatagttagtggagtagttaagttgaataaagttcaataaataa 52290892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 12904975 - 12904853
Alignment:
Q  69 agaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat-tcttattacttgttgttagcggagtagataagtttgataaa 167  Q
    ||||||| |||| || |||||||||||||  |||||||| ||| |||||  ||||||| | |||||| |||| ||||| ||||||  |||||| ||| ||    
T  12904975 agaaaataattaattatgttgatttcaattataaaattagtatgatttatcaaaatatcttttattaattgtagttagtggagtaattaagttggatgaa 12904876  T
Q  168 attcaataaataaatgtataata 190  Q
    |||||||||||||  ||||||||    
T  12904875 attcaataaataagggtataata 12904853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 45811802 - 45811717
Alignment:
Q  32 aaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||| ||||| | ||||| ||||||| |||  |||||||||||||||| || ||||||||| |||||||||||||| || |||||    
T  45811802 aaaataatagttgtttaaggtttgtgtgtgatatttaagaaaatgattaattatgttgattttaatggtaaaattaacataattta 45811717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 30682066 - 30682182
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    ||||||| ||||||||| |||| || |||| |||| |||||| | |||||||||| |||||| |||||||| |||| ||||  ||| ||  |||||| ||    
T  30682066 ttttaaggaaatgattaattgttttaattttaatgttaaaatgagtatcatttactaaaataatcttattaattgtagttaatggaataattaagttgga 30682165  T
Q  164 taaaattcaataaataa 180  Q
      |||||||||||||||    
T  30682166 cgaaattcaataaataa 30682182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 43719379 - 43719272
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| |||||||||||| |||||||||||| |||||||| ||  ||| || ||||||| |||| ||||| ||||||| ||| || |||     
T  43719379 ttaataaaatgattaattgtgttgattttaatggtaaaatt-atatcattcactgaaacatccttattaattgtagttagtggagtagttaaattggatg 43719281  T
Q  166 aaattcaat 174  Q
     ||||||||    
T  43719280 gaattcaat 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 52206849 - 52206909
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    ||||| ||||||||| ||   |||||||||||||||||||||||||||||||| |||||||    
T  52206849 ttaaggaaatgattagttaaattgatttcaatggtaaaattaatatcatttactaaaatat 52206909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 19611756 - 19611694
Alignment:
Q  327 aaaatatgatgtgaaaatcttttggagcaacttttgggagctatatttacttgtgcacctttg 389  Q
    |||||| ||| ||||||  |||||||||||||||| | ||||||||||||||||| |||||||    
T  19611756 aaaataagatatgaaaaaattttggagcaacttttcgaagctatatttacttgtgaacctttg 19611694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 33491043 - 33491125
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaatt 106  Q
    ||||||||| |||  |||||| ||||| |||||| | || | ||||| ||||||||| |||||||||||||||| ||||||||    
T  33491043 tccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 40462466 - 40462308
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    |||||||||||| ||| | | ||||| |||| |  ||| ||||||||||||||||| |||| ||||||||| || ||||      ||||||| | |||||    
T  40462466 ccgtctcaaaataataattgtttaaggtttgagcgtgatttttaagaaaatgattaattgttttgatttcagtgataaa------atcattt-ctaaaat 40462374  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | | || ||| |||| |||||  |||||| |||||| ||||||||||||||||||  |||||||||    
T  40462373 acttttgttaattgtagttagaagagtagttaagttggataaaattcaataaatagttgtataata 40462308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 3313390 - 3313240
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| | || | ||||||||||||||||    || ||||||||||||||||||| ||  ||| || |||| |  ||||||| |||    
T  3313390 tagtcgtttaaggtttgtgcacgattattaagaaaatgattat----gtcgatttcaatggtaaaattagtagaattaactaaaacacccttattaattg 3313295  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    | ||||  ||||||  |||||| ||| |||||||||||||||   ||||||||||    
T  3313294 tagttaatggagtatttaagttggatgaaattcaataaataagattataataatg 3313240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 34957615 - 34957502
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataa 166  Q
    |||| ||||||||| ||||||||| ||  |||||||||||  ||| ||||||  |||||| ||||||| || | ||||| ||||||| | ||||  || |    
T  34957615 taaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttacttaaatatccttattaattatagttagtggagtagttcagttaaatga 34957516  T
Q  167 aattcaataaataa 180  Q
    ||||||||||||||    
T  34957515 aattcaataaataa 34957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 51064772 - 51064861
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    ||||| ||||||||| |||  |||||| ||||  ||| || | |||| |||| |||||||||| |||||||| |||||||||||||||||    
T  51064772 acttcctccgtctcataatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaatta 51064861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 29595721 - 29595797
Alignment:
Q  58 tatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||| ||||||||||||| ||| || | ||||||| ||| ||||||||||||| |||||  |||||||| ||||||    
T  29595721 tatgatttttaagaaaatggttaattatattgattttaatagtaaaattaatattatttattaaaatatttttatta 29595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 30711180 - 30711072
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    |||| |||| || ||||||||| |||| ||||||||||||||||||| |||| |   |||||| |||| ||||  |||| |  |||||| ||| ||||||    
T  30711180 aaataattaattatgttgattttaatgataaaattaatatcatttactaaaacaccattattaattgtagttaatggagcaattaagttagatgaaattc 30711081  T
Q  172 aataaataa 180  Q
    |||||||||    
T  30711080 aataaataa 30711072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 38512176 - 38512040
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    ||||||||| ||||||| ||||  ||||||||||| ||||   ||||| |||| || | ||||||| |||| ||||||| ||||||||||  |||||||     
T  38512176 tctcaaaataatagtcgtttaaagtttgtgtatgatttttttaaaaataattaattttattgattttaatgataaaattgatatcatttattaaaatata 38512077  T
Q  128 cttattacttgttgttagcggagtagataagtttgat 164  Q
     |||||  ||||  |||  ||||||| ||||||||||    
T  38512076 tttattgattgtaattattggagtagttaagtttgat 38512040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 38705267 - 38705174
Alignment:
Q  89 gatttcaatggtaaaattaata---tcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    ||||||||||||||||||| ||   |||||||| ||| ||||||||||| |||| |||||  |||||  |||||| ||| |||||||||||||||    
T  38705267 gatttcaatggtaaaattagtactatcatttactaaa-tattcttattaattgtagttagttgagtaattaagttagatgaaattcaataaataa 38705174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 49447802 - 49447917
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||||| |   ||| |||||| |||||| ||||||  ||||||| |||| |||||  || ||| ||| |||||| |||||     
T  49447802 aaatgattaattgtgttgatttcaacg---aaaataatattatttaccaaaatacccttattaattgtagttagtagaatagttaaatttgatgaaattt 49447898  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  49447899 aataaataagggtataata 49447917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 17652903 - 17652739
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| || || ||| || | || | ||||| ||||||||| ||||||||||||  ||||||||| || ||    |||| ||||    
T  17652903 tccgtctctaaataatagtcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----ttactaaaa 17652808  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
     || ||||||| |||| ||||| |  |||| |||||| ||| ||||| |||||||||  ||||||||||    
T  17652807 catccttattaattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataataat 17652739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 38137403 - 38137572
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatat---catttacaa 120  Q
    ||||||||| |||  |||||| ||||| |||||| |||| | | ||  |||| |||  |||||| ||||||||| ||||||||| ||    ||| ||| |    
T  38137403 tccgtctcataatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaatagtaaaattagtactgacatctacta 38137502  T
Q  121 aaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||||||||||||||  ||| ||||| || |||| ||| || ||| ||||||||||||||||  |||||||    
T  38137503 aaatattcttattaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataata 38137572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 7757640 - 7757591
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatt 115  Q
    ||||| ||| ||||| ||||||||||||||||| |||||||| |||||||    
T  7757640 ttaaggaaaagattaattgtgttgatttcaatgataaaattattatcatt 7757591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 48541036 - 48541109
Alignment:
Q  100 taaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaa 173  Q
    ||||||||||||||||||  ||||||||||||||| ||||  ||||  |||||| ||||||  || ||||||||    
T  48541036 taaaattaatatcatttattaaaatattcttattaattgtaattagttgagtagttaagttgaatgaaattcaa 48541109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 50035199 - 50035276
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||| |||||| |||| | |||||||||||| || || |||||||||||||  |||||||| || ||||||| ||||    
T  50035199 ttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagtagcatttaccaaaa 50035276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 114
Target Start/End: Original strand, 25108547 - 25108575
Alignment:
Q  86 gttgatttcaatggtaaaattaatatcat 114  Q
    |||||||||||||||||||||||||||||    
T  25108547 gttgatttcaatggtaaaattaatatcat 25108575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 31158528 - 31158580
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||    
T  31158528 aaaatgattaattgtgctgatttcgatagtaaaattaataacatttactaaaa 31158580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 8e-40; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 49175907 - 49176066
Alignment:
Q  31 caaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattctt 130  Q
    |||||| ||||||| ||||| |||||| |||| ||||||||||||||||| |||||  |||||||||| |||||||| |||||||||| ||||||  |||    
T  49175907 caaaataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtatcatttactaaaataacctt 49176006  T
Q  131 attacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||| |||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||    
T  49176007 attaattgtagttagcggagtagttaagttggataaaattcaataaataagggtataata 49176066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 462113 - 461944
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| |||||   |||||||||||| || | ||||||||||||||||| |||| |||||||||||||||||| |||||| |||||| ||||    
T  462113 tccgtctcgaaataatagtaatttaagatttgtgcataatttttaagaaaatgattaattgtattgatttcaatggtaaaagtaatattatttactaaaa 462014  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||| ||||||| ||||  |||||||||||| ||||||  ||||||||||| ||||||  |||||||||||    
T  462013 tatccttattaattgtaattagcggagtagttaagttgaataaaattcaacaaataagggtataataatg 461944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 38405068 - 38405237
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| |||||| | || | ||||| ||||||||| || ||||||||| |||||||||||||||||||||||| ||||    
T  38405068 tccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaattaatatcatttactaaaa 38405167  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||  ||||||| |||| ||||| || |||| |||||| ||| |||||||||||||||| |||||||||||    
T  38405168 tacccttattaattgtagttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatg 38405237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 49428308 - 49428477
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| ||| || | || | ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  49428308 tccgtctctaaattatagtcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataatttactaaaa 49428407  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||  ||||||| |||| ||||| ||||||  |||||| ||| |||||||||||||||  |||||||||||    
T  49428408 tacccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataataatg 49428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 193
Target Start/End: Original strand, 42616878 - 42617038
Alignment:
Q  33 aaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttat 132  Q
    |||| ||||||| ||||| |||||| |||| | ||||  |||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  42616878 aaattatagtcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaattaatatcatttactaaaatatttttat 42616977  T
Q  133 tacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    || |||| || || ||||||| |||||   || ||||||||||||||| ||||||||||||    
T  42616978 taattgtagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatg 42617038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 52247394 - 52247559
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| |||||  ||||| | || | ||||||||||||||| ||||||| |||||||||||||||||||||  |||||| ||||    
T  52247394 tccgtctctaaattatagtcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaattaatacaatttactaaaa 52247493  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataat 189  Q
    ||| ||||||| |||| ||||| ||||||| ||||||  || ||||||| ||||||| ||||||||    
T  52247494 tatccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaataagtgtataat 52247559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 11288638 - 11288752
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||| |||||||| |||| ||| | ||||||| |||||| ||||    
T  11288638 ttaagaaaatgattaattgtattgatttcaatggcaaaattaatatcatttactaaaata-tcttattaattgtagttggtggagtagttaagttggata 11288736  T
Q  166 aaattcaataaataaa 181  Q
    ||||||||||||||||    
T  11288737 aaattcaataaataaa 11288752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 193
Target Start/End: Complemental strand, 54506929 - 54506774
Alignment:
Q  38 atagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattactt 137  Q
    ||||||| ||||||||||| || |  | |||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||  |||| | ||    
T  54506929 atagtcgtttaagatttgtttacggttattaagaaaatgattaactgtgttgatttcaatggtaaaattaatatcatttattaaaatatcattatcaatt 54506830  T
Q  138 gttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    || ||||| ||||||| |||||||||| ||||||||| |||||   ||||||||||    
T  54506829 gtagttagtggagtagttaagtttgatgaaattcaattaataagaatataataatg 54506774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 2653573 - 2653406
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||| | |||||||||||| |||| | ||||  ||||||||| |||||||||||||||| ||||||||| |||||||||  ||||    
T  2653573 tccgtctctaaataatagttgtttaagatttgtgcatgattattaa--aaatgattaattgtgttgatttcaattgtaaaattagtatcatttattaaaa 2653476  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    || |||||||| |||| ||||  ||||||| ||| || ||| ||||| |||||||||| |||||||||||    
T  2653475 tactcttattaattgtagttaaaggagtagttaaattggatgaaatttaataaataaaggtataataatg 2653406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 5841393 - 5841563
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| |||||| |  | | ||||| ||||||||  ||| |||||||| |||||||||||||||||||||||| ||||    
T  5841393 tccgtctctaaattatagtcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaattaatatcatttactaaaa 5841492  T
Q  124 tattcttattacttgttgttagcggagtag-ataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||  ||||||| |||| ||||| |||||||  |||||| ||| |||||||||||||||| |||||||||||    
T  5841493 tacccttattaattgtagttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatg 5841563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 17237262 - 17237428
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||  ||||| |||||| |||| | |||||||||| |||| ||||||||||| |||||||||||||| || ||||||| ||||    
T  17237262 tccgtctcacaatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacatttactaaaa 17237361  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |  ||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  ||||||||    
T  17237362 caaccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataata 17237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 22130139 - 22130029
Alignment:
Q  83 tgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaat 182  Q
    ||||||||||||||||||| ||||| ||||||||||||||| || ||||||| |||| ||||| ||||||  |||||| ||| ||||||||||||||||     
T  22130139 tgtgttgatttcaatggtataattagtatcatttacaaaaacatccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaag 22130040  T
Q  183 gtataataatg 193  Q
    |||||||||||    
T  22130039 gtataataatg 22130029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 32884962 - 32884800
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||| ||||||||| |||  |||||| ||||| |||||| | || | ||||||||||||||| |||||||||||||||||||| ||||| || ||||||    
T  32884962 acttcctccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagtagcattta 32884863  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
      |||| | |||||||| |||| ||||| ||||||| |||||| |||  ||||||||||||||    
T  32884862 gtaaaacactcttattaattgtagttagtggagtagttaagttggatggaattcaataaataa 32884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 36985941 - 36985776
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| ||| ||| ||||||||| | || || |||| || ||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  36985941 tccgtctcaaaataatactcgtttaagatttttatacgatttttcaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaa 36985842  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataat 189  Q
    ||  | ||||| |||| |||||  || ||  |||||| ||| |||||||||||||||  |||||||    
T  36985841 tacccgtattaattgtagttagtagaataattaagttggatgaaattcaataaataagggtataat 36985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 47464373 - 47464497
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||| | |||||||| |||| ||| | ||||||| |||||| |||     
T  47464373 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaactcttattaattgtagttggtggagtagttaagttggatg 47464472  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  47464473 aaattcaataaataagggtataata 47464497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 53412257 - 53412097
Alignment:
Q  30 tcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattct 129  Q
    ||||||| ||||| | ||| |||||  ||| || ||||||||||| ||||| || | ||||||||||||||||||||| |||||||||| |||||||| |    
T  53412257 tcaaaataatagttgtttacgatttacgtacgatttttaagaaaacgattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttt 53412158  T
Q  130 tattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||||| || | ||| | ||| ||| |||||| ||| |||||||||||||||| ||||||||    
T  53412157 tattaattatagtttgtggaatagttaagttggatgaaattcaataaataaaagtataata 53412097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 33790699 - 33790866
Alignment:
Q  26 cgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    |||||| |||| ||||||| ||||| ||| || | || | ||||||||||||||| ||||||||||||  |||||||||||| | |||||| | |||| |    
T  33790699 cgtctctaaataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcatttgctaaaaca 33790798  T
Q  126 ttcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
      ||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  |||||||||||    
T  33790799 cccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataataatg 33790866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 34360762 - 34360644
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||| ||||||||||||||||||||| || ||||||| |||| | |||||||| |||| ||||| ||||||| ||||||  |||||||||    
T  34360762 aaatgattaattgtattgatttcaatggtaaaattagtagcatttactaaaacactcttattaattgtagttagtggagtagttaagttgaataaaattc 34360663  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  34360662 aataaataagggtataata 34360644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 11907607 - 11907734
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||  |||||||||||| |||||||||| |||| |  ||||||| |||| ||||  ||||||| |||||| |||     
T  11907607 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttattggagtagttaagttggatg 11907706  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || |||||||||||||||||| ||||||    
T  11907707 aagttcaataaataaatgtattataatg 11907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 35380341 - 35380468
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || ||||||||| ||||||||||||| || ||||||| |||| ||  |||||| |||| ||||| ||||| | |||||| |||     
T  35380341 ttaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttactaaaacatcattattaattgtagttagtggagtggttaagttggatg 35380440  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  35380441 aaattcaataaataagagtataataatg 35380468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 52859765 - 52859916
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| |||||||||||||  || || | || | ||||| ||||||||| ||||||||||||  |||||||||||| |||||||||| ||||    
T  52859765 tccgtctctaaataatagtcgcttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 52859864  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaata 175  Q
     || ||||||| |||| ||||| ||||||| ||||||  || ||||||||||    
T  52859865 catccttattaattgtagttagtggagtagttaagttgaatgaaattcaata 52859916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 35252044 - 35251943
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| ||||||| || ||||||||| |||| ||| |||||||| |||| ||||| | ||||||||| ||||||||||||||||||| ||||    
T  35252044 tccgtctcaaaattatagtcgtttgagatttgtgcatgattttcaagaaaataattaattgtggttatttcaatgataaaattaatatcatttactaaaa 35251945  T
Q  124 ta 125  Q
    ||    
T  35251944 ta 35251943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 6643668 - 6643792
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||| ||  |||||| |||| ||||| ||  ||| |||||| |||     
T  6643668 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatctttattaattgtagttagtggtatagttaagttggatg 6643767  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  6643768 aaattcaataaataagggtataata 6643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 7061672 - 7061796
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||||||||| | |||||  |||||| |||| ||||| ||| ||  ||||||  ||     
T  7061672 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactataatatctttattaattgtagttagtggattaattaagttgaatg 7061771  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  7061772 aaattcaataaataagggtataata 7061796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 35311231 - 35311355
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| || |||| ||||||||||||||||||||  ||||||| | || | |||||||| |||| ||||| ||||||  |||||| |||     
T  35311231 ttaaggaaatgattaattatgttaatttcaatggtaaaattaattgcatttactagaacactcttattaattgtagttagtggagtaattaagttggatg 35311330  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||| ||||||||    
T  35311331 aaattcaataaataaaggtataata 35311355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 53346899 - 53346759
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| |||| ||||||| | || | |||||||||| |||  |||||||  |||||||||||||||||||| ||||||| |||| |  ||||||| ||     
T  53346899 tagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggtaaaattaatagcatttactaaaacacccttattaattt 53346800  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaata 179  Q
    | ||||| ||||||| |||||||||| ||||||||||||||    
T  53346799 tagttagtggagtagttaagtttgatgaaattcaataaata 53346759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 6609874 - 6609747
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||  |||||||||||| ||||||||||||||| ||  |||||| ||||  |||  ||||||| |||||| |||     
T  6609874 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacaaaaacatctttattaattgtaattattggagtagttaagttggatg 6609775  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||| |||||||||||  |||||||||||    
T  6609774 aaactcaataaataagagtataataatg 6609747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 21240712 - 21240839
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||||||||  |||||||||||  |||||||||||| |||||||||| || | || ||||||| |||| |||||  |||||| |||||| |||     
T  21240712 ttaaggaaatgattaactgtgttgattttgatggtaaaattagtatcatttactaacacatccttattaattgtagttagttgagtagttaagttggatg 21240811  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  21240812 aaattcaataaataagggtataataatg 21240839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 30682204 - 30682331
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| ||||||| |||| | |||||||||||||||||||||| | ||||| ||||||| |||| |||||  |||||| ||| ||  ||     
T  30682204 ttaaaaaaatgattaattgtgttaattttattggtaaaattaatatcatttactataatatccttattagttgtagttagtagagtagttaatttgaatg 30682303  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||| | |||||||||    
T  30682304 aaattcaataaataaaagcataataatg 30682331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 27880214 - 27880315
Alignment:
Q  30 tcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattct 129  Q
    ||||||| ||||||| ||||| ||||| ||||| ||||||  ||||||||||| |||||||||||||||||||||||| |||||||||| | |||| |||    
T  27880214 tcaaaataatagtcgtttaaggtttgtatatgatttttaaataaatgattatt-gtgttgatttcaatggtaaaattagtatcatttactagaatactct 27880312  T
Q  130 tat 132  Q
    |||    
T  27880313 tat 27880315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 43237398 - 43237232
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||| ||| || | || | ||||| ||||||||| ||||||| |||||||||||||||||| ||  |||||| ||||    
T  43237398 tccgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagtaatatttactaaaa 43237299  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     ||  |||||| || | ||||| | ||||| |||||| ||| ||||||||||||||| |||||||||    
T  43237298 aatcattattaattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataata 43237232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 16821346 - 16821463
Alignment:
Q  73 aatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattca 172  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||| | ||||| ||||||| || | ||||| ||||||  ||||||  || |||||||    
T  16821346 aatgattaattgtgttgatttcaatgataaaattagtatcatttactataatatccttattaattatagttagtggagtatttaagttgaatgaaattca 16821445  T
Q  173 ataaataaatgtataata 190  Q
    ||||||||  ||||||||    
T  16821446 ataaataagggtataata 16821463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 30192320 - 30192239
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||| |||||| | ||||||||||||||| |||| |||||    
T  30192320 ttttaagaaaatgattaattgtgttgatttcaattataaaattaatgtcatttgctaaaatattcttattaattgtagttag 30192239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 28500857 - 28501018
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| |||| || ||||  |||||| | || | ||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  28500857 tccgtctctaaattatagccgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaa 28500956  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||  ||||||| |||  ||        ||| |||||||||| |||||||||||||||  |||||||||||    
T  28500957 tacccttattaattgcagt--------tagttaagtttgatgaaattcaataaataagggtataataatg 28501018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 42517646 - 42517714
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||  |||||||    
T  42517646 ttaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcatttactaaaatacccttatta 42517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 17114553 - 17114426
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||  |||||||||||| |||||||||| |||| |  ||||||| |||| ||||| ||||||| ||| || ||      
T  17114553 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagttaatttggagg 17114454  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||| |||| ||||||    
T  17114453 aagttcaataaataaaggtattataatg 17114426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 47773027 - 47773154
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||| |||| ||||||||||||  |||||||||||| |||||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| |||     
T  47773027 ttaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatg 47773126  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||  |||| ||||||    
T  47773127 aagttcaataaataagggtattataatg 47773154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 50264104 - 50264215
Alignment:
Q  82 ttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaa 181  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||| |||||||| |||| ||||| | | ||  ||||||  || |||||||||||||||     
T  50264104 ttgtgttgatttcaatgttaaaattaacatcatttactaaaatactcttattaattgtagttagtgaaatatttaagttgaatgaaattcaataaataag 50264203  T
Q  182 tgtataataatg 193  Q
     |||||||||||    
T  50264204 ggtataataatg 50264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 32469918 - 32470024
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    ||||||||| ||| | | ||||||||| || || | ||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||  |||| |||    
T  32469918 tctcaaaataatatttgtttaagatttatgcataattttaaagaaaatgattaattgtgttgattttaatggtaaaattagtatcatttattaaaacatt 32470017  T
Q  128 cttatta 134  Q
    |||||||    
T  32470018 cttatta 32470024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 46396891 - 46396969
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| |||| | |||||||| |||| ||||    
T  46396891 ttaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcatttactaaaacactcttattaattgtagtta 46396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 2066935 - 2066775
Alignment:
Q  33 aaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttat 132  Q
    |||| ||||||| ||||| ||| || | || | ||||| ||||||||| ||||||||||||  |||||||| ||| ||| |||||  |||| |  |||||    
T  2066935 aaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattatttattaaaacacccttat 2066836  T
Q  133 tacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    || || | ||||| || |||| |||||| ||| |||||||||||||||| |||||||||||    
T  2066835 taattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataataatg 2066775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 26147639 - 26147751
Alignment:
Q  82 ttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgat-aaaattcaataaataa 180  Q
    ||||||||||||  |||||||||||| |||||||||| |||| |||||||||| |||| ||||| ||||||  |||||| ||| ||  ||||||||||||    
T  26147639 ttgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtagttagtggagtaattaagttggatgaattttcaataaataa 26147738  T
Q  181 atgtataataatg 193  Q
      |||||||||||    
T  26147739 gggtataataatg 26147751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 51625235 - 51625139
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||| |||| ||||||| ||||  |||||| | || | ||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  51625235 gtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaa 51625139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 8175549 - 8175652
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    |||||||||| ||||| | ||| |  ||||| |||| | |||| ||||||| || ||||||||||||||||||||||||||||||||||||  ||||||     
T  8175549 gtctcaaaataatagttgtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggtaaaattaatatcatttattaaaatac 8175648  T
Q  127 tctt 130  Q
    ||||    
T  8175649 tctt 8175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 38502490 - 38502617
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||| |||| ||||||||||||  |||||||||||| |||||||||  |||||| | |||||| || | ||||  | ||||| |||||| ||||    
T  38502490 ttaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaatacttttattaattatagttaatgtagtagttaagttggata 38502589  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||| ||||||    
T  38502590 aaattcaataaataagagtattataatg 38502617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 41711470 - 41711578
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| || ||||||||| ||||||||||||||||||||||   |||||||  || ||| || |  |||||||||| | ||||||| || ||||||    
T  41711470 aaatgattaattatgttgattttaatggtaaaattaatatcattttttaaaatatcatttttaattttatttagcggagttgttaagttttatgaaattc 41711569  T
Q  172 aataaataa 180  Q
    |||||||||    
T  41711570 aataaataa 41711578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 18741503 - 18741606
Alignment:
Q  87 ttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtat 186  Q
    |||||||||| |||||||||| | |||||||  |||||||  |||||| |||| ||||  ||||||| |||||| ||| ||||||||||||||| | |||    
T  18741503 ttgatttcaacggtaaaattagtgtcatttattaaaatatctttattaattgtagttaatggagtagttaagttggatgaaattcaataaataagtttat 18741602  T
Q  187 aata 190  Q
    ||||    
T  18741603 aata 18741606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 13016639 - 13016689
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattt 116  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  13016639 ttaagaaaatgattatttgacttgatttcaatgataaaattaatatcattt 13016689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 49747069 - 49746947
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaatt 170  Q
    ||||| |||| ||||||||||||||||| |||||||| ||  |||||| ||||||   | |||| || | |||||  |||||| |||||| ||| |||||    
T  49747069 aaaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaataccttcattaattatagttagttgagtagttaagttggatgaaatt 49746970  T
Q  171 caataaataaatgtataataatg 193  Q
    ||||||||||  |||||||||||    
T  49746969 caataaataagggtataataatg 49746947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 3689669 - 3689548
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||| |||||||  |||||||||||| |||||||||| |||| | |||||||| || | |||||  |||| | |||||| ||| |||||     
T  3689669 aaatgattaattgtattgattttgatggtaaaattagtatcatttactaaaacactcttattaattatagttagttgagttgttaagttagatgaaatta 3689570  T
Q  172 aataaataaatgtataataatg 193  Q
    ||| |||||  |||||||||||    
T  3689569 aattaataagggtataataatg 3689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 40122835 - 40122976
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| | || | ||||| ||||||||| ||| |||||||| |||| |||||||| || ||||||| |||| |  ||||||  |||    
T  40122835 tagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagtagcatttactaaaacacccttattgattg 40122934  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    | ||||| |||| || |||||| ||  |||||||||||||||    
T  40122935 tagttagtggagcagttaagttcgacgaaattcaataaataa 40122976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 5618655 - 5618579
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgt 142  Q
    |||| |||||||| | |||||||||||| |||||||||||||| || |||||  ||||||| ||||||| |||||||    
T  5618655 ttaaaaaaatgatgagttgtgttgattttaatggtaaaattaaaattatttattaaaatatccttattaattgttgt 5618579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 44536204 - 44536327
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||| |||||||||||||  |  |||||  |||| |  ||||||| |||| ||||| ||||||| |||||| |||     
T  44536204 ttaaggaaatgattaattgtgttgattttaatggtaaaattagcaggatttattaaaacacccttattaattgtagttagtggagtagctaagttagatg 44536303  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||| ||||||  ||||||||    
T  44536304 aaattcaa-aaataagggtataata 44536327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 2942611 - 2942776
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||| ||||| || || | ||||  ||||||||| ||||||||||||| ||| |||||||| || ||||||| ||||    
T  2942611 tccgtctcacaatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagtagcatttactaaaa 2942710  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |  ||||||| |||| ||||| ||||| | ||||||  || || ||||||||| |||  |||||||    
T  2942711 ca-ccttattaattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataata 2942776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 3670031 - 3669965
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgattt 93  Q
    |||| ||||| ||||||| ||||||||| || |||| |||||| |||||||||| ||||||||||||    
T  3670031 gtctgaaaataatagtcgtttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 21325172 - 21325225
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttaca 119  Q
    ||||| ||||||| | ||||||| |||||||||||||||||| |||||||||||    
T  21325172 ttaaggaaatgataaattgtgtttatttcaatggtaaaattagtatcatttaca 21325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 47358958 - 47359071
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataa 166  Q
    ||||||||| |||  ||||||||||||||||| ||||||||  || |||| | |||||| | |||||| |||| || || ||||||  ||||||  || |    
T  47358958 taagaaaattattgattgtgttgatttcaatgataaaattagaataattttctaaaatacttttattaattgtagtcagtggagtaattaagttgaatga 47359057  T
Q  167 aattcaataaataa 180  Q
    ||||||||||||||    
T  47359058 aattcaataaataa 47359071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 3098826 - 3098758
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgt 139  Q
    |||||||||| || | |||||||||||| ||||||| ||||||||||| |||||||  |||||| ||||    
T  3098826 aaaatgattaattatattgatttcaatgataaaattgatatcatttactaaaatatctttattaattgt 3098758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 4972715 - 4972595
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| |||||||||||| | || | ||||  ||||||||| |||||||||||||||| | ||||||  |  ||||||| ||||    
T  4972715 tccgtctcacaatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaattgaaaaattggtgacatttactaaaa 4972616  T
Q  124 tattcttattacttgttgtta 144  Q
     | |||||||| |||| ||||    
T  4972615 cactcttattaattgtagtta 4972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 25869842 - 25869902
Alignment:
Q  56 tgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattt 116  Q
    ||||||| |||| |||||||||||| ||||||||||||||||  |||||||| || |||||    
T  25869842 tgtatgattttttagaaaatgattaattgtgttgatttcaattttaaaattagtaacattt 25869902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 31370383 - 31370435
Alignment:
Q  141 gttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||||| ||||||| |||||| ||| ||| ||||||||||||||||||||||||    
T  31370383 gttagtggagtagttaagttggatgaaaatcaataaataaatgtataataatg 31370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 34321719 - 34321758
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaat 105  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  34321719 ttaagaaaatgattaattgtgttgattttaatggtaaaat 34321758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 39397458 - 39397399
Alignment:
Q  65 tttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    |||||| ||||||||| || ||||||||||| ||||||| ||||| |||||||| |||||    
T  39397458 tttaaggaaatgattaattatgttgatttcattggtaaatttaatgtcatttactaaaat 39397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 17512352 - 17512406
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    |||||||||| ||| |||||||| || |||||||||||||| |||||| ||||||    
T  17512352 aaaatgattagttgagttgattttaaaggtaaaattaatataatttactaaaata 17512406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 19265921 - 19265811
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || | || ||||||||  |||||||||| | |||||  ||||||  ||||||| || | ||||| ||||||| ||||||  ||     
T  19265921 ttaagaaaatgattaattatatttatttcaataataaaattaatgttatttattaaaataaccttattaattatagttagtggagtagttaagttgaatg 19265822  T
Q  166 aaattcaataa 176  Q
    |||||||||||    
T  19265821 aaattcaataa 19265811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 19265776 - 19265739
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattatttcaaaa 238  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  19265776 tgttgcattagtattctaaagtgacaattatttaaaaa 19265739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 181
Target Start/End: Complemental strand, 25233288 - 25233179
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    |||| |||| ||||||| ||||  |||||||||||| |||||||||| |||| | |  ||||| || | ||||| | ||||| |||||| ||| || |||    
T  25233288 aaataattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactagtattaattatagttagtgaagtagttaagttggatgaagttc 25233189  T
Q  172 aataaataaa 181  Q
    ||||||||||    
T  25233188 aataaataaa 25233179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 29575220 - 29575143
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||||||| || |||| |||| |||| ||||||||||| ||||||  |||||| |||| ||| |||| ||||    
T  29575220 taagaaaatgattaattatgttaatttaaatgataaaattaataacatttattaaaatactcttgttaattgtagtta 29575143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 11024898 - 11024966
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||||||||||||| | |||||||||| ||||||| |||   | |||||||| |||||||| ||||||    
T  11024898 ttaagaaaatgattaatagtgttgattttaatggtataatatgtttcatttactaaaatatttttatta 11024966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 26147769 - 26147801
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattattt 233  Q
    ||||||||| |||||||||||||||||||||||    
T  26147769 tgttgtattggtattctaaagtgacaattattt 26147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 35998924 - 35998801
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| ||||| ||||||| ||||||||| ||  ||||||||| || ||||||  |||||||  |||||| |||| |||   ||||||| |||||| |||     
T  35998924 ttaaaaaaattattatttatgttgattttaacagtaaaattagtaacatttattaaaatatcattattaattgtagttgatggagtagttaagttggatg 35998825  T
Q  166 aaattcaataaataaatgtataata 190  Q
    || |||||||||||||  |||||||    
T  35998824 aa-ttcaataaataaagatataata 35998801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 43902360 - 43902250
Alignment:
Q  73 aatgattatttgtgttgatttcaatggtaaaattaa---tatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaat 169  Q
    |||||||| || ||||||||| |||| |||||||||   ||| |||||  ||||||||||||||| |  | ||||| ||||||  ||||||  || ||||    
T  43902360 aatgattaattatgttgattttaatgataaaattaatattattatttattaaaatattcttattaatcatagttagtggagtaattaagttgcatgaaat 43902261  T
Q  170 tcaataaataa 180  Q
    |||||||||||    
T  43902260 tcaataaataa 43902250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 46385587 - 46385520
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||||||||||||| |||  ||||||||||| || ||||||||||||||| |   |||||||||||||    
T  46385587 ttaagaaaatgattaattgatttgatttcaatagt-aaattaatatcatttgccttaatattcttatta 46385520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 27542948 - 27542781
Alignment:
Q  26 cgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    |||||| |||| || |||| ||||| |||||| | || | ||||| ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||    
T  27542948 cgtctctaaattattgtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaataccatttactaaaata 27542849  T
Q  126 ttcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     |||||||| |||| ||||| ||||||| |||||| |||||||||||||||||||  |||||||||||    
T  27542848 ctcttattaattgtagttagtggagtagttaagttggataaaattcaataaataagagtataataatg 27542781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 27580707 - 27580586
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||| ||||| ||||||| ||||||  || |||||     
T  27580707 aaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaatta 27580608  T
Q  172 aataaataaatgtataataatg 193  Q
    | ||||||||||||||||||||    
T  27580607 attaaataaatgtataataatg 27580586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 193
Target Start/End: Original strand, 1248576 - 1248731
Alignment:
Q  38 atagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattactt 137  Q
    ||||||| |||||||||||| | |  | ||||| |||| |||| || |||||||||||||||||||||||||||||||||| ||||||  ||||||| ||    
T  1248576 atagtcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaatt 1248675  T
Q  138 gttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    || ||||| | ||||| ||||||  |||||||||||| |||||  |||||||||||    
T  1248676 gtagttagtgaagtagttaagttgaataaaattcaattaataagggtataataatg 1248731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 7827884 - 7828053
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||| ||| ||||| |||||  | || | |||||||||| |||| |||||||||||||||||||||||||| |||||||||  ||||    
T  7827884 tccgtctctaaataataatcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcatttattaaaa 7827983  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||  ||||||| |||| ||||| ||||||| |||||| ||| ||||| |||||||||   ||||||||||    
T  7827984 tacccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataaggatataataatg 7828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 8725015 - 8725136
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||| |  ||||||| |||| ||||| ||||||| ||| ||  || ||||||    
T  8725015 aaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacacttattaattgtagttagtggagtagttaacttgaatgaaattc 8725114  T
Q  172 aataaataaatgtataataatg 193  Q
    |||||||||  |||||||||||    
T  8725115 aataaataatagtataataatg 8725136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 21060737 - 21060616
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||| ||||  |||||||||||| ||| |||||| |||||| |||||||| |||| ||||| ||||||| |||||| ||||||||||    
T  21060737 aaatgattaattgtgtttattttgatggtaaaattagtattatttactaaaatactcttattaattgtagttagtggagtagttaagttggataaaattc 21060638  T
Q  172 aataaataaatgtataataatg 193  Q
    |||||||||  |||||||||||    
T  21060637 aataaataatggtataataatg 21060616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 38508145 - 38508270
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| ||||||| ||||||||||||   || ||||||||||||||||| ||||||| |||||||||||||||||| ||||| | |  ||||    
T  38508145 tccgtctcaaaataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtatcactcattaaaa 38508244  T
Q  124 tattcttattacttgttgttagcgga 149  Q
    || |||||||| |||| |||||||||    
T  38508245 tactcttattaattgtagttagcgga 38508270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 6315777 - 6315904
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||  ||||||| ||||||||| ||||||||||||||||||| ||||||  ||||||| |||| ||||| | ||||| |||||| |||     
T  6315777 ttaaggaaatgattgattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttattaattgtagttagtgaagtagttaagttggatg 6315876  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  6315877 aaattcaataaataagggtataataatg 6315904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 31655193 - 31655042
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||  |||||||| || | ||||  ||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||    
T  31655193 tagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactataatatccttattaattg 31655094  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | ||||| ||||||  || |||  || |||||||||||||||  ||||||||    
T  31655093 tagttagtggagtaattatgttgaatgaaattcaataaataagggtataata 31655042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 46 - 192
Target Start/End: Original strand, 37184059 - 37184205
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    ||||| |||||| | || |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||  |||||  |||| ||||     
T  37184059 ttaagttttgtgcaagatttttaaaaaaatgattaattgagttgatttcaatggtaaaattaatatcatttactaaaatatctttattcattgtagttaa 37184158  T
Q  146 cggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
      || |   |||||||||| ||||||||||||||||| |||||||||    
T  37184159 tagactgattaagtttgatgaaattcaataaataaatatataataat 37184205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 6754140 - 6754028
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataa 166  Q
    |||||||||||||| || ||||||||||||| ||||||||||| |||||||| |||| | |||||||| |||| ||||| ||||||| |||||| ||| |    
T  6754140 taagaaaatgattaatt-tgttgatttcaatagtaaaattaatgtcatttactaaaacactcttattaattgtagttagtggagtagttaagttggatga 6754042  T
Q  167 aattcaataaataa 180  Q
    ||||||||||||||    
T  6754041 aattcaataaataa 6754028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 40530224 - 40530348
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||| | |||||| |||     
T  40530224 ttaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtggttaagttggatg 40530323  T
Q  166 aaattcaataaataaatgtataata 190  Q
    ||||| |||||||||  ||||||||    
T  40530324 aaattaaataaataagggtataata 40530348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 4441129 - 4441010
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaatt 170  Q
    ||||| |||| |||||||||||| |||| |||||||||||| |||||| |||||||| |||||| |||| ||||| ||||||| ||| || ||| |||||    
T  4441129 aaaataattaattgtgttgattttaatgataaaattaatattatttactaaaatatttttattaattgtagttagtggagtagttaaattggatgaaatt 4441030  T
Q  171 caataaataaatgtataata 190  Q
    ||||||||||  ||||||||    
T  4441029 caataaataacggtataata 4441010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 6753659 - 6753785
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || | || |||||||||||||||||| |||||||||| ||||||  ||||||| |||| ||||| ||||||| |||||| |||     
T  6753659 ttaagaaaatgattaatt-tattaatttcaatggtaaaattagtatcatttactaaaatacccttattaattgtagttagtggagtagttaagttggatg 6753757  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||| |||||||||  |||||||||||    
T  6753758 aaatttaataaataagggtataataatg 6753785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 32440296 - 32440181
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| ||||||| | ||| |||||| |||| ||||||  ||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||    
T  32440296 tccgtctcaaaataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaattaatatcatttactaaaa 32440197  T
Q  124 tattcttattacttgt 139  Q
    ||  ||||||| ||||    
T  32440196 tacccttattaattgt 32440181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 40900031 - 40899904
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||  |||| ||||||| |||||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| |||     
T  40900031 ttaaggaaatgattaattgtgttgattttgatggcaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttagatg 40899932  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  40899931 aaattcaataaataagggtataataatg 40899904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 11796169 - 11796281
Alignment:
Q  68 aagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaa 167  Q
    ||||||||| ||| |||||||||||| |||| |||||||||||| |||||| |||||||| |||||| |||| ||||| | ||||| |||||| ||| ||    
T  11796169 aagaaaatggttaattgtgttgattttaatgataaaattaatattatttactaaaatattattattaattgtagttagtgtagtagttaagttagatgaa 11796268  T
Q  168 attcaataaataa 180  Q
    ||| |||||||||    
T  11796269 atttaataaataa 11796281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 29374455 - 29374331
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || |||||||||||||| ||||||||||| ||||||| |||| |   |||||| |||| ||||| ||||||| ||| ||  |||    
T  29374455 ttaagaaaatgattaattatgttgatttcaatgataaaattaatagcatttactaaaagacctttattaattgtagttagtggagtagttaaattgaata 29374356  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  29374355 aaattcaataaataagggtataata 29374331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 2232046 - 2232193
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| | || | |||||||||||| || |||||||||||||||||||||||||| || ||||||  |||| | |||||||| ||     
T  2232046 tagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttattaaaaaactcttattaatt- 2232144  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
       |||| ||||||| |||||| ||| |||||||||||||||  ||||||||    
T  2232145 ---ttagtggagtagttaagttggatgaaattcaataaataagggtataata 2232193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 8698416 - 8698298
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||||||||||||||||||||||||| |  ||||||| |||| |  ||||||| |||| ||||| ||||| | |||||| ||| ||||||    
T  8698416 aaatgattaattgtgttgatttcaatggtaaaattagttgcatttaccaaaacacccttattaattgtagttagtggagtggttaagttggatgaaattc 8698317  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  8698316 aataaataagggtataata 8698298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 9515901 - 9515791
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||| |||||| | || | |||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  9515901 tccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaa 9515802  T
Q  124 tattcttatta 134  Q
     || |||||||    
T  9515801 catccttatta 9515791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 15439318 - 15439444
Alignment:
Q  65 tttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgat 164  Q
    |||||| ||||||||| |||| || |||||||||||||||||| |||||||||| |||||| | |||||| ||||  |||| | ||||| ||||||||||    
T  15439318 tttaaggaaatgattaattgtattaatttcaatggtaaaattagtatcatttactaaaatacttttattaattgtatttagagtagtagttaagtttgat 15439417  T
Q  165 aaaattcaataaataaatgtataataat 192  Q
      |||| |||||||||  ||||||||||    
T  15439418 -taatttaataaataagggtataataat 15439444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 4818706 - 4818540
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  | |||| ||||| |||||| | || | ||||| |||| |||| |||||||||||||||| ||||||||| || ||||||| ||||    
T  4818706 tccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcatttactaaaa 4818607  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |  ||||||| |||| ||||| |||||   |||||| ||| |||||||||||||||  ||||||||    
T  4818606 cacccttattaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataata 4818540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 41496193 - 41496069
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| ||||| |||| |||||||||||||||||||||||||| |  ||||||  |||| ||  |||||| |||| ||||| ||||||| ||| || |||     
T  41496193 ttaaaaaaataattaattgtgttgatttcaatggtaaaattagttgcatttagtaaaacatcattattaattgtagttagtggagtagttaaattggatg 41496094  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||| ||||||||||| ||||||||    
T  41496093 aaatgcaataaataaaggtataata 41496069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 19930059 - 19929932
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || |||||||||  ||||||||| ||   |||||||| |||| || ||||||| |||| ||||| | | ||| |||||| |||     
T  19930059 ttaagaaaatgattaattttgttgattttgatggtaaaactagcgtcatttactaaaacatccttattaattgtagttagtgaaatagttaagttggatg 19929960  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  19929959 aaattcaataaataagggtataataatg 19929932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 30512685 - 30512800
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatt-acttgttgttagcggagtagataagtttgat 164  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| ||||||||| || ||| ||||||| || ||| ||||| | | ||| |||||| |||    
T  30512685 ttaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacatgtagttagtgaaatagttaagttggat 30512784  T
Q  165 aaaattcaataaataa 180  Q
     ||||| |||||||||    
T  30512785 gaaatttaataaataa 30512800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 30553025 - 30553140
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatt-acttgttgttagcggagtagataagtttgat 164  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| ||||||||| || ||| ||||||| || ||| ||||| | | ||| |||||| |||    
T  30553025 ttaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacatgtagttagtgaaatagttaagttggat 30553124  T
Q  165 aaaattcaataaataa 180  Q
     ||||| |||||||||    
T  30553125 gaaatttaataaataa 30553140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 6615886 - 6616003
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    |||| |||| |||||||||||||||||||||||||| || ||||||| |||| || ||||||| || | ||||| ||||| | |||||| |||  |||||    
T  6615886 aaataattaattgtgttgatttcaatggtaaaattagtagcatttaccaaaacatccttattaattttagttagtggagtggttaagttggat-gaattc 6615984  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  6615985 aataaataagggtataata 6616003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 11904320 - 11904208
Alignment:
Q  65 tttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattctta-ttacttgttgttagcggagtagataagtttga 163  Q
    ||||||||| |||||| |||| |||| ||||||  ||||||||||||||||||| |||||| ||||| ||| |||| ||| | ||||||| ||| || ||    
T  11904320 tttaagaaagtgattaattgtattgagttcaataataaaattaatatcatttactaaaatactcttatttaattgtagttggtggagtagttaaattcga 11904221  T
Q  164 taaaattcaataa 176  Q
    ||||| |||||||    
T  11904220 taaaaatcaataa 11904208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 18890551 - 18890623
Alignment:
Q  62 aattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||||||||||||||||| ||| |||| ||| ||||||||||||| |||||||||  |||||||| ||||||    
T  18890551 aattttaagaaaatgattagttgagttgtttttaatggtaaaattagtatcatttattaaaatatttttatta 18890623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 41478942 - 41478816
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat-tcttattacttgttgttagcggagtagataagtttg 162  Q
    ||||||||||||||||| ||||| | |||||||||||||||||| | |||||||| |||||||  ||| ||| |||  ||||  ||| ||| |||||| |    
T  41478942 ttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgtcatttactaaaatatcccttgttaattgcagttaatgga-tagttaagttag 41478844  T
Q  163 ataaaattcaataaataaatgtataata 190  Q
    || |||||||||||||||  ||||||||    
T  41478843 atgaaattcaataaataagggtataata 41478816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 29856140 - 29856066
Alignment:
Q  86 gttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtt 160  Q
    ||||||||||||| |||||||||||||| || | |||||| |||||||| |||| ||||| ||||||| ||||||    
T  29856140 gttgatttcaatgataaaattaatatcacttgctaaaatactcttattaattgtagttagtggagtagttaagtt 29856066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 26285478 - 26285598
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| |||  ||||||| || |||||||||| |||||||||  |||| |  | ||||| |||| ||||  | ||||| ||||||  |||    
T  26285478 ttaataaaatgattagttgacttgattttaacggtaaaattagtatcatttatgaaaacacacgtattaattgtagttaatgaagtagttaagttgtata 26285577  T
Q  166 aaattcaataaataaatgtat 186  Q
    |||||||||||||||||||||    
T  26285578 aaattcaataaataaatgtat 26285598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 42922834 - 42922894
Alignment:
Q  33 aaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgattt 93  Q
    |||| ||||||| |||||||||||| |||| | ||||||||||||||| ||||||||||||    
T  42922834 aaattatagtcgtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 29570532 - 29570381
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| |||||||||||| | || | ||||  ||||||||| |||||||||||| |||| |||||||| ||  |||| | |||| |   |||||| |||    
T  29570532 tagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaattattagtatttgctaaaacacctttattaattg 29570433  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | ||||  ||| ||| |||||| ||| |||||||||||||||  ||||||||    
T  29570432 tagttaatggaatagttaagttggatgaaattcaataaataagagtataata 29570381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 38161440 - 38161515
Alignment:
Q  94 caatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaat 169  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| | || ||||| ||||||| |||||| ||| ||||    
T  38161440 caatggtaaaattcatatcatttactaaaatatccttattaatcgtagttagtggagtagttaagttggatgaaat 38161515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 41492417 - 41492291
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat-tcttattacttgttgttagcggagtagataagtttg 162  Q
    ||||||||||||||||| ||||| | |||||||||||||||||| |  ||||||| |||||||  ||| |||  ||| ||||  ||| ||| |||||| |    
T  41492417 ttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgacatttactaaaatatcccttgttaaatgtagttaatgga-tagttaagttag 41492319  T
Q  163 ataaaattcaataaataaatgtataata 190  Q
    || |||||||||||||||  ||||||||    
T  41492318 atgaaattcaataaataagggtataata 41492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 22848394 - 22848508
Alignment:
Q  76 gattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaata 175  Q
    ||||| |||||||||||||||| ||||||||||||  |||||  |||| |  ||||||| |||| ||||  ||||||| ||  || ||| ||||||||||    
T  22848394 gattaattgtgttgatttcaatagtaaaattaatagtatttattaaaacacccttattaattgtagttaatggagtagttagattggatgaaattcaata 22848493  T
Q  176 aataaatgtataata 190  Q
    |||||  ||||||||    
T  22848494 aataagggtataata 22848508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 3076707 - 3076662
Alignment:
Q  62 aattttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    |||||||| |||||||||| ||||||||||||||||| ||||||||    
T  3076707 aattttaacaaaatgattaattgtgttgatttcaatgataaaatta 3076662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 18841594 - 18841541
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||||| |||||||||| || | ||||||| |||||||||||||||||||||||    
T  18841594 ttttaaaaaaatgattaattatattgatttaaatggtaaaattaatatcattta 18841541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 843592 - 843509
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    ||||||||| ||| ||| | | ||||| |||||| | || | ||||||||||||||| || |||||||||||||| ||||||||    
T  843592 tccgtctcacaataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaatta 843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 5129232 - 5129310
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||| |||| |||  ||| ||| ||||||||||||||||| |||||| | || |||||||||| |||| ||||    
T  5129232 ttaagaaaataattagttgcattggtttgaatggtaaaattaatataatttactataacattcttattaattgtagtta 5129310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 39326002 - 39325859
Alignment:
Q  38 atagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattactt 137  Q
    ||||||| ||||| |||||| |  ||||||   |||||||||| || ||||| ||| ||||||||  ||||| | |||||| || |||   ||||||| |    
T  39326002 atagtcgtttaaggtttgtgcacaaatttttttaaaatgattaattatgttgtttttaatggtaa--ttaatgtaatttactaagatacctttattacat 39325905  T
Q  138 gttgttagcggagtagataagtttgataaaattcaataaataaatg 183  Q
     | ||||| ||||||| |||||| ||| ||||||||||||||||||    
T  39325904 atagttagtggagtagttaagttggattaaattcaataaataaatg 39325859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 42803626 - 42803744
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    |||| |||| ||||||| |||||||| ||||||||| ||  |||||| |||| |   |||||| |||| ||||  ||||| | |||||| ||| ||||||    
T  42803626 aaataattaattgtgttcatttcaattgtaaaattagtagtatttactaaaacaccattattaattgtagttaatggagtggttaagttggatgaaattc 42803725  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  42803726 aataaataagagtataata 42803744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 15818480 - 15818521
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||    
T  15818480 ttaaggaaatgtttaattgtgttgatttcaatggtaaaatta 15818521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 5282457 - 5282397
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||||||||||||| ||||| | |||| |||| |||||| ||||| |||||| |||||    
T  5282457 ttttaagaaaatgattaattgtgctaattttaatgataaaataaatataatttactaaaat 5282397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 16181763 - 16181807
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaata 110  Q
    ||||||||||||||| ||   ||||||||||||||||||||||||    
T  16181763 ttaagaaaatgattagttaaattgatttcaatggtaaaattaata 16181807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 8e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 17695485 - 17695319
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| ||| ||| ||||| |||||| | || | ||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  17695485 tccgtctcaaaattataatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattgatatcatttacaaaaa 17695386  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||||||||||| || | |||||  |||||| |||||| ||| |||||||||||||||  ||||||||    
T  17695385 tattcttattaattatagttagtagagtagttaagttggatgaaattcaataaataagggtataata 17695319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 37322590 - 37322414
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaag-aaaatgattatttgtgttgatttcaatggtaaaattaatatcattt 116  Q
    ||||| |||||||| |||| ||||||| ||||| ||| || | || | ||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  37322590 acttcatccgtctctaaattatagtcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaattaatatcattt 37322491  T
Q  117 acaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |  ||||||  ||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  |||||||||||    
T  37322490 attaaaatacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatg 37322414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 39691644 - 39691476
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||| |||| ||| ||| ||||| |||||| | || | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  39691644 ccgtctctaaattataatcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaat 39691545  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    | |||||||| |||  ||||| |||||||  |||||  || |||||||||||||||  |||||||||||    
T  39691544 actcttattaattgcagttagtggagtagtaaagttgaatgaaattcaataaataagggtataataatg 39691476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 14523372 - 14523499
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||| ||||||| |||||| |||     
T  14523372 ttaaggaaatgattttttgtgttgatttcaatggtaaaattaatatcatttactaaaatatccttattaattgtagttagtggagtagttaagttagatg 14523471  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||| |||||   ||||||||||    
T  14523472 aaattcaattaataaggatataataatg 14523499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 45235736 - 45235580
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| |||||| | || | ||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  45235736 tccgtctctaaataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaa 45235637  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
     |  ||||||| |||| ||||  | | ||| |||||||||| |||||||||||||||    
T  45235636 cacccttattaattgtagttaatgaaatagttaagtttgatgaaattcaataaataa 45235580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 16377608 - 16377784
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||| |||||||||| |||  || ||| |||||||||||| | || | ||||  ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  16377608 acttattccgtctcacaatattaatcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaattaatatcattta 16377707  T
Q  118 caaaaatattcttattacttgttgttagcggagtag----ataagtttgataaaattcaataaataaatgtataata 190  Q
    | ||||||  ||||||| |||| ||||| |||||||     |||||| ||| |||||||||||||||| ||||||||    
T  16377708 ccaaaataaccttattaattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataata 16377784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 8947052 - 8947179
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||||||| |||||||| ||  |||||| |||| || ||||||| || | ||||| ||||||| |||||| |||     
T  8947052 ttaaggaaatgattaattgtgttgatttcaatgataaaattagtaatatttactaaaacatccttattaattatagttagtggagtagttaagttggatg 8947151  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  8947152 aaattcaataaataagggtataataatg 8947179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 43410539 - 43410412
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||| |||| |||||||||| |||||| ||||||||||||||||||| ||||||| ||||||| |||| ||||  ||||||| ||||||  ||     
T  43410539 ttaaggaaattattaattgtgttgatatcaatgataaaattaatatcatttactaaaatatccttattaattgtagttaatggagtagttaagttgaatg 43410440  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||||||| |  |||||||||||    
T  43410439 aaattcaataaatgagagtataataatg 43410412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 19937824 - 19937731
Alignment:
Q  32 aaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    ||||| ||||||| ||||| |||||| | || | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  19937824 aaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaata 19937731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 36354401 - 36354570
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||  ||||| ||| |||| || | ||||| |||||| || ||||||||||||  |||||||||||| ||| |||||   |||    
T  36354401 tccgtctctaaataatagtcatttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattatttattgaaa 36354500  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     | |||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  |||||||||||    
T  36354501 cactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataatg 36354570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 16463843 - 16463675
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||| |||| ||||||| ||||| ||| || | |  | ||||| ||||||||| ||||||||||||  |||||||||||| |||||||||| ||||     
T  16463843 ccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 16463744  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |  ||||||| |||| ||||| |||||||  ||||||||| ||||| |||||||||  ||| |||||||    
T  16463743 acccttattaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatg 16463675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 35314000 - 35313876
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| ||  |||||  |||  |  ||||||| |||| ||||| ||||||| ||||||||||     
T  35314000 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttattaaagcaaccttattaattgtagttagtggagtagttaagtttgatg 35313901  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  35313900 aaattcaataaataagagtataata 35313876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 15359087 - 15359214
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||| ||||||| ||||||||||||  ||| ||||||||||||||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| |||     
T  15359087 ttaagaagatgattaattgtgttgattttgatgataaaattaatatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatg 15359186  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||  |||| ||||||    
T  15359187 aagttcaataaataagggtattataatg 15359214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 178
Target Start/End: Original strand, 41220897 - 41221058
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaaga-tttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattt 116  Q
    ||||| ||||||||| ||| |||||||||||| | ||| |||| || |||||| || ||||||| ||||||||||||||||  |||||||| ||||||||    
T  41220897 acttcatccgtctcacaataatagtcgcttaaaaatttatgtacgatttttaaaaacatgattaattgtgttgatttcaattataaaattagtatcattt 41220996  T
Q  117 acaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaat 178  Q
    |  |||||||| |||||| |||| ||||  | ||||| |||||  ||| || ||||||||||    
T  41220997 attaaaatatttttattaattgtagttaatgaagtagttaagtcagatgaagttcaataaat 41221058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 16805988 - 16805880
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||||||||||| ||| ||||||||| |||||||||| ||||||| ||||||| |||| ||||| ||||| | |||||| ||| |||||     
T  16805988 aaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagttagtggagttgttaagttggattaaattt 16805889  T
Q  172 aataaataa 180  Q
    |||| ||||    
T  16805888 aatagataa 16805880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 16845269 - 16845161
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||||||||||| ||| ||||||||| |||||||||| ||||||| ||||||| |||| ||||| ||||| | |||||| ||| |||||     
T  16845269 aaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagttagtggagttgttaagttggattaaattt 16845170  T
Q  172 aataaataa 180  Q
    |||| ||||    
T  16845169 aatagataa 16845161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 34120439 - 34120564
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||  ||||||||| || ||| |||||| |||||||  |||||| |||| ||||| ||| ||| |||||| |||     
T  34120439 ttaagaaaatgattaattgtgttgattttgatggtaaaactagtattatttactaaaatat--ttattaattgtagttagtggaatagttaagttggatg 34120536  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||||| |||  |||||||||||    
T  34120537 aaattcaataagtaagagtataataatg 34120564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 17346383 - 17346477
Alignment:
Q  87 ttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaa 181  Q
    ||||||||||  |||||||||||||||||||  |||||||| |||||| |||| ||||| ||||||| |||||| ||  ||||||||||||||||    
T  17346383 ttgatttcaaaagtaaaattaatatcatttattaaaatatttttattaattgtagttagtggagtagttaagttggaagaaattcaataaataaa 17346477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 35242295 - 35242421
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    ||||||| | ||| ||| |||||||||||| |||| ||||||||  ||||||||| | |||||  |||||| |||| |||||  |||||| |||||| ||    
T  35242295 ttttaaggagatgtttaattgtgttgattttaatgttaaaattagaatcatttactagaatatatttattaattgtagttagttgagtagttaagttgga 35242394  T
Q  164 taaaattcaataaataaatgtataata 190  Q
    | |||||||||||||||| ||||||||    
T  35242395 tgaaattcaataaataaaagtataata 35242421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 36794439 - 36794270
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||||||  || |||  | ||||| ||||||||| ||||||||||||  |||||||||||| |||| ||||| ||||    
T  36794439 tccgtctctaaataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcttttactaaaa 36794340  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
        |||||||  ||| ||||| ||||||| |||||| ||| || ||||||||||||  |||| ||||||    
T  36794339 cgcccttattaactgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatg 36794270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 43115808 - 43115929
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||||||| |||| ||| || ||||||| |||||| |||||||  |||| ||||| ||||||| ||||||  || ||||||    
T  43115808 aaatgattaattgtgttgatttcaatgataaagttagtagcatttactaaaatactcttatttattgtagttagtggagtagttaagttgaatgaaattc 43115907  T
Q  172 aataaataaatgtataataatg 193  Q
    ||  |||||  |||||||||||    
T  43115908 aacgaataatggtataataatg 43115929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 18853158 - 18853315
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaa--aattaatatcatttacaaa 121  Q
    ||||| ||||||| ||||||| |||| ||||||| | ||  |||||| |||| |||| ||||||||||||||||| |||  ||||  |||||||||| ||    
T  18853158 tccgtatcaaaataatagtcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatgataattaatt-gtatcatttaccaa 18853256  T
Q  122 aatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    |||| |||||||| |||| |||||  |||||  ||| || ||| |||||||||||||||    
T  18853257 aatactcttattagttgtagttagtagagtaattaatttggatgaaattcaataaataa 18853315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 5789600 - 5789772
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||| ||||||||| |||  |||||  ||||| |||||| | || | ||||| ||||||||| |||| |||| |||||| ||||||||| |  ||||||    
T  5789600 acttcctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattta 5789699  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | |||| |  ||||||| |||| ||||| | | ||| |||||| ||| |||||||||||||||  ||||||||    
T  5789700 ctaaaacacccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataata 5789772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 39329663 - 39329777
Alignment:
Q  67 taagaaaatgattatttgtgt--tgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgat 164  Q
    |||||||||||| | ||||||  ||||||||||| ||||||||||| ||||||| |||| | |||||||| |||| ||||  ||||||| ||| || |||    
T  39329663 taagaaaatgatcaattgtgtattgatttcaatgataaaattaatagcatttactaaaacactcttattaattgtagtta-tggagtagttaaattggat 39329761  T
Q  165 aaaattcaataaataa 180  Q
     |||||||||||||||    
T  39329762 gaaattcaataaataa 39329777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 39785701 - 39785571
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaata---tcatttacaaaaatattcttattacttgttgttagcggagtagataagtttg 162  Q
    ||||| ||||||||| ||||||||||||  |||||||||||| ||   |||||||| |||| | |||||||| |||| ||||  ||||||| |||||| |    
T  39785701 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtactatcatttactaaaacactcttattaattgtagttaatggagtagttaagttgg 39785602  T
Q  163 ataaaattcaataaataaatgtataataatg 193  Q
    || || ||||||||||||  |||| ||||||    
T  39785601 atgaagttcaataaataagggtattataatg 39785571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 19937442 - 19937371
Alignment:
Q  122 aatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||||||||||| |||||||||||    
T  19937442 aatactcttattaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataataatg 19937371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 28186346 - 28186212
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    ||||| |||||| |||| |||||||||||| |||| |  ||||||| | |||||||||||||  ||||||||  ||||||| ||||||  || | |||||    
T  28186346 ttaagttttgtggatgatttttaagaaaataattaata-tgttgatattaatggtaaaattataatcatttattaaaatatccttattcattttagttag 28186248  T
Q  146 cggagtagataagtttgataaaattcaataaataaa 181  Q
    | |||||| ||||||  || ||||||||||||||||    
T  28186247 cagagtagttaagttgaatgaaattcaataaataaa 28186212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 25637593 - 25637467
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataa 166  Q
    |||| ||||||||| ||||||||||||  |||||||||||| | |||||||| |||| |   |||||| |||| ||||  ||||||| |||||| ||| |    
T  25637593 taaggaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacctttattaattgtagttataggagtagttaagttggatga 25637494  T
Q  167 aattcaataaataaatgtataataatg 193  Q
    |||| |||||||||  || ||||||||    
T  25637493 aatttaataaataagggtgtaataatg 25637467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 27501496 - 27501586
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcat 114  Q
    ||||||||| |||  | |||| ||||| ||||||||||| | ||||| ||||||| | || ||||||||||||||||||||||| ||||||    
T  27501496 tccgtctcacaatattcgtcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagtatcat 27501586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 43699599 - 43699720
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||||||||  ||||||||||||||| ||||||||| |||||||||  ||||||  | |||||    || |||| ||||||  |||||| ||||    
T  43699599 ttaagaaaatgattaactgtgttgatttcaatagtaaaattagtatcatttattaaaatacacctatta---atttttagtggagtaattaagttggata 43699695  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||| ||  ||||||||    
T  43699696 aaattcaataaacaagggtataata 43699720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 1206708 - 1206781
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||| || ||||||||||| ||||||||||| || ||||||| ||||||| ||||||| |||| ||||    
T  1206708 aaaatgattaattatgttgatttcagtggtaaaattagtaacatttactaaaatatccttattaattgtagtta 1206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 26607968 - 26608008
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaatt 106  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  26607968 ttaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 43730720 - 43730669
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| ||||    
T  43730720 aaatgattaggtgtgttgattttaatggtaaaattaatatcatttactaaaa 43730669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 3323291 - 3323337
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||    
T  3323291 aaaatgattaattgtgttgatttcaatggtaaaattagtaacattta 3323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 31448665 - 31448807
Alignment:
Q  38 atagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattactt 137  Q
    ||||||| ||||| |||||| | || | ||||| ||||||||| ||||||||||||  ||||||||||||   |||||||| |||| |  |||| || ||    
T  31448665 atagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagagtcatttactaaaacacccttactaatt 31448764  T
Q  138 gttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    |  ||||| | | ||| |||||| ||| |||||||||||||||    
T  31448765 gcagttagtgaaatagttaagttggatgaaattcaataaataa 31448807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 32831175 - 32831289
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||| |||  |  ||| ||| ||||||||||||||||||||||||| |||| ||  |||||| |||| ||||  ||||||| ||| |  |||     
T  32831175 ttaagaaaatgtttagcttagttaattacaatggtaaaattaatatcatttactaaaacatctttattaattgtagttattggagtagttaaatgagatg 32831274  T
Q  166 aaattcaataaataa 180  Q
    |||||||||||||||    
T  32831275 aaattcaataaataa 32831289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 43730537 - 43730491
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||    
T  43730537 aaatgattaggtgtgttgattttaatggtaaaattaatatcatttac 43730491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 32783477 - 32783420
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||||| ||||||| ||||  || |||||||||||||||||||| ||||    
T  32783477 ttaagaaaatgattaattgtgtttattttgatagtaaaattaatatcatttactaaaa 32783420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 7494913 - 7494965
Alignment:
Q  141 gttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||||||||||||| |||||| ||| |||||||||||||||  |||||||||||    
T  7494913 gttagcggagtagttaagttggatgaaattcaataaataagggtataataatg 7494965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 11367191 - 11367140
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||| ||||||||    
T  11367191 taagaagatgattaattgtgttgattttaattgtaaaattaatgtcatttac 11367140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 15435498 - 15435447
Alignment:
Q  52 tttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaa 103  Q
    |||||| |||| |||||||||||| |||| ||||||||||||||||| ||||    
T  15435498 tttgtgcatgatttttaagaaaataattaattgtgttgatttcaatgataaa 15435447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 19444230 - 19444132
Alignment:
Q  95 aatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||| |||||||||||| |||||| ||||| || |||||| ||||  ||||  |||||| |||| | |||||| ||||||||| ||  |||||||||||    
T  19444230 aatgataaaattaatattatttactaaaatgttattattaattgtaattagtcgagtagttaagatggataaatttcaataaacaagggtataataatg 19444132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 10005125 - 10005198
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgtt 140  Q
    |||||||||||| | ||||||||||||||    |||||||| |||||||||| |||||||  |||||| |||||    
T  10005125 taagaaaatgatcaattgtgttgatttcagcaataaaattagtatcatttactaaaatatctttattaattgtt 10005198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 26863421 - 26863482
Alignment:
Q  129 ttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||||| |||| ||||| ||||||| |||||  ||| ||||||| |||||||||||||||||    
T  26863421 ttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataata 26863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 27501633 - 27501685
Alignment:
Q  207 attagtattctaaagtgacaattatttcaaaacagaaaagaaaaatattaaaga 260  Q
    |||||||||||||| |||||||||||| || ||||| || ||||||||||||||    
T  27501633 attagtattctaaaatgacaattattttaagacagagaa-aaaaatattaaaga 27501685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 27866606 - 27866518
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtag 153  Q
    ||||||| ||||||||| |  ||||||||| |||| ||||||||||||| ||||  ||||||| ||||||| |||| |||| ||| ||||    
T  27866606 ttttaaggaaatgattaataatgttgattttaatgataaaattaatatc-tttagtaaaatatccttattaattgtagttaacggtgtag 27866518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 43410396 - 43410359
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattatttcaaaa 238  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  43410396 tgttgcattagtattctaaagtgacaattattttaaaa 43410359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 12520855 - 12520895
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatat 111  Q
    ||||| |||| |||||||||||| |||||||||||||||||    
T  12520855 aaaataattaattgtgttgattttaatggtaaaattaatat 12520895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 19426563 - 19426467
Alignment:
Q  72 aaatgattatttgtgttga-tttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaa 167  Q
    ||||||||| ||||||||| |||||||| ||||||||  | ||||||| |||||||  |||||| |||| || ||  |||||| |||||| ||||||    
T  19426563 aaatgattaattgtgttgattttcaatgataaaattagcaacatttactaaaatatcattattaattgtagtaagtcgagtagttaagttggataaa 19426467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 26608178 - 26608270
Alignment:
Q  101 aaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||||| |||||| |||||||| || | ||||| ||| ||| ||||||  || ||| | | |||||||  |||||||||||    
T  26608178 aaaattaatatcatttactaaaatactcttattaattatagttagtggattagttaagttgaatgaaaataattaaataagggtataataatg 26608270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 31271167 - 31271020
Alignment:
Q  33 aaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttat 132  Q
    |||| ||||||| ||||| |||||||| || | ||||||||||||||  |||||||||||| |||||||||||||||||||| ||| |||||| ||||||    
T  31271167 aaattatagtcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactcttat 31271068  T
Q  133 tacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    || || | ||||| ||||||| |||||| |||||||||||||||||||    
T  31271067 taattatagttagtggagtagttaagttggataaaattcaataaataa 31271020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 4428317 - 4428478
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    ||||||||| ||||||| ||||| ||| ||||| | |||||||||||||||||||||||||||||| |||| |||||||| |||||||||| ||||||      
T  4428317 tctcaaaataatagtcgtttaaggtttatgtat-atttttaagaaaatgattatttgtgttgattttaatgataaaattattatcatttactaaaataca 4428415  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |||||| |||| ||||| | | ||| |||||| ||| |||||||||||||||| ||||||||    
T  4428416 attattaattgtagttagtgaattagttaagttagatgaaattcaataaataaaagtataata 4428478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 45425625 - 45425793
Alignment:
Q  22 cttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaa 121  Q
    ||||||||||| |||  |||||| ||||| ||| || |||| | ||||||||||||||| |||||||||||| |||||||||||||||| ||||||  ||    
T  45425625 cttccgtctcataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaattaataacatttattaa 45425724  T
Q  122 aatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    || |||||||||| |||| ||||| ||||||  ||||||  || |||||||||||||||  ||||||||    
T  45425725 aacattcttattaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataata 45425793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 21216062 - 21216215
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| ||||  ||||| ||||| |||||| |||| | ||||| ||||||||| |||||||||||||||||||||||||| |  ||||||| ||||    
T  21216062 tccgtctcacaatgtcagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcatttactaaaa 21216161  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaa 177  Q
     || ||||||| |||| ||||| ||||||| |||||| ||| ||||||||||||    
T  21216162 catccttattaattgtagttagtggagtagttaagttggatgaaattcaataaa 21216215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 5053155 - 5053283
Alignment:
Q  65 tttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgat 164  Q
    |||||| ||||||||| ||||||||||||  ||||||||||||||||||||||| |||| | |||||||| |||| ||||||||||||| ||| || |||    
T  5053155 tttaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacagtcttattaattgtagttagcggagtagttaaattggat 5053254  T
Q  165 aaaattcaataaataaatgtataataatg 193  Q
     | |||||||||||||  |||||||||||    
T  5053255 gagattcaataaataagagtataataatg 5053283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 10179908 - 10180076
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||  ||||||| ||||| |||||| | || | |||||||||||| || |||| ||||||||||||||||||||| ||| |||||| ||||    
T  10179908 tccgtctctaaaaaatagtcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataatttactaaaa 10180007  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
    ||  ||||||| |||| ||||| ||||||| ||||||  || ||||||||| ||||| |||||||||||    
T  10180008 tacacttattaattgtagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataat 10180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 17719221 - 17719388
Alignment:
Q  26 cgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    |||||| |||| ||||||| |||||||||||| | || | |||| |||||||||| ||||  |||||| ||||||||| ||| ||| |||||| ||||||    
T  17719221 cgtctctaaataatagtcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtattatttactaaaata 17719320  T
Q  126 ttcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    | ||||||| || | ||||| ||||||| |||||| ||| ||||| |||||||||| |||||||||||    
T  17719321 tccttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataatg 17719388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 11976897 - 11977063
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||| |||||| |||| | ||| | |||| |||| |||||||||||||||||||| ||| | || ||||||| ||||    
T  11976897 tccgtctcataatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagtagcatttactaaaa 11976996  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||  ||||||| |||| |||||  |||||| |||||| ||| |||||||||||||||| ||||||||    
T  11976997 tacccttattaattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataata 11977063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 32476442 - 32476273
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| | ||||| ||||| |||||| | |  | ||||||||||||||  || |||||||||||||| ||||||||||||||||||  ||||    
T  32476442 tccgtctctaaattaaagtcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaattaatatcatttattaaaa 32476343  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||  ||||||| |||| ||||  | ||||| |||||||||| |||||||||||||||  |||||| ||||    
T  32476342 tacccttattaattgtagttaatgaagtagttaagtttgatgaaattcaataaataagggtataacaatg 32476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 9300116 - 9300230
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||| |  ||||||| || | ||||| ||||||| ||||||  ||     
T  9300116 ttaagaaaatgattgtttgtgttgattttaatggtaaaattaatagcatttactaaaacacccttattaattttagttagtggagtagttaagttgaatg 9300215  T
Q  166 aaattcaataaataa 180  Q
    |||||||||||||||    
T  9300216 aaattcaataaataa 9300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 44761503 - 44761609
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| ||| ||||||    
T  44761503 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattc 44761602  T
Q  172 aataaat 178  Q
    |||||||    
T  44761603 aataaat 44761609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 39482770 - 39482602
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| |||||||||||| | || | ||||||||||||||| ||||||||||||||| |||||||||| ||  |||||| ||||    
T  39482770 tccgtctcacaatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaatttactaaaa 39482671  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
     |  ||||||| || | ||||| ||| ||| |||||   || |||||||||||||||  ||||||||||    
T  39482670 cacccttattaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataat 39482602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 10097994 - 10098109
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| |||| |||||||  ||||||||||||||||||||||| | || |  ||||||| |||| ||||| ||||||| |||||| |||     
T  10097994 ttaagaaaatgattaattgtattgattttgatggtaaaattaatatcatttactataacacccttattaattgtagttagtggagtagttaagttggatg 10098093  T
Q  166 aaattcaataaataaa 181  Q
    || |||||||||||||    
T  10098094 aagttcaataaataaa 10098109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 7703117 - 7703227
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||| || || ||||||| ||||  |||||||| || | ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7703117 tccgtcttaacataatagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaattaatatcatttactaaaa 7703216  T
Q  124 tattcttatta 134  Q
    ||  |||||||    
T  7703217 tacccttatta 7703227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 34948690 - 34948804
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||| ||| ||||||||| ||||||||||| ||| |   |||||| |||| ||||| ||||||| |||||| |||     
T  34948690 ttaaggaaatgattaattgtgttgatttaaatagtaaaattagtatcatttacagaaacacatttattaattgtagttagtggagtagttaagttggatg 34948789  T
Q  166 aaattcaataaataa 180  Q
    |||||||||||||||    
T  34948790 aaattcaataaataa 34948804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 42887104 - 42886990
Alignment:
Q  75 tgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaat 174  Q
    |||||| |||||||||||||||| | ||||||| |||||||||| ||||||   |||||| |||| ||||| || |||| |||||| |||||||||||||    
T  42887104 tgattaattgtgttgatttcaatagcaaaattagtatcatttactaaaatacctttattaattgtagttagtggcgtagttaagttggataaaattcaat 42887005  T
Q  175 aaataaatgtataat 189  Q
    ||||||  |||||||    
T  42887004 aaataagagtataat 42886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 27294018 - 27294183
Alignment:
Q  22 cttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaa 121  Q
    |||| |||||||||| ||||| | ||||| |||||| | || ||||||  || | |||| ||||||| |||| |||| |||||||| |||| ||||| ||    
T  27294018 cttcggtctcaaaataatagttggttaaggtttgtgcacgatttttaaagaagttattaattgtgttcatttgaatgataaaattagtatcttttactaa 27294117  T
Q  122 aatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtata 187  Q
    |||||  |||||| |||  ||||| ||||||  |||||| ||| ||||||||||||||||||||||    
T  27294118 aatatatttattaattgcagttagtggagtaattaagttggatgaaattcaataaataaatgtata 27294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 396614 - 396741
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| || |||||||||||| |||||||||| |||||||||| | ||||| ||||||| |||| ||||  | ||||| ||  || ||||    
T  396614 ttaaggaaatgattaattatgttgatttcaacggtaaaattagtatcatttactacaatatccttattaattgtagttaatgaagtagttatattggata 396713  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||| |||||  |||||||||||    
T  396714 aaattcaattaataagggtataataatg 396741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 31231843 - 31231716
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||| | |||||| |||||  |||||||||||||||||||||||  ||| |  ||||||| |||| ||||| ||||||| |||||| ||||    
T  31231843 ttaaggaaatgatgaattgtgtcgattttgatggtaaaattaatatcatttactgaaacacccttattaattgtagttagtggagtagttaagttggata 31231744  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||  |||| ||||||    
T  31231743 aagttcaataaataagggtattataatg 31231716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 7173065 - 7172903
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    |||| |||| ||||| | ||||| ||||||||| | | ||||  ||||||||| ||||||||||||||||| |||||||| || ||||||| |||| ||     
T  7173065 tctctaaattatagttgtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagtagcatttactaaaacata 7172966  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |||||| |||| ||||  | ||||| ||||||  || |||||||||||||||  ||||||||    
T  7172965 tttattaattgtagttaatgaagtagttaagttgaatgaaattcaataaataagggtataata 7172903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 41092097 - 41092028
Alignment:
Q  76 gattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||| |||||    
T  41092097 gattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatactcttattaattgtagttag 41092028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 39300917 - 39301001
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||| |||||||||||||| || | ||||  ||||||||| || |||||||||| ||||||||||||||||||||||| ||||    
T  39300917 tagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaattaatatcatttactaaaa 39301001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 42972511 - 42972579
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  42972511 ttaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaatacccttatta 42972579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 36006901 - 36007004
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||| |||||||||||| |||| |||||||||||| ||| || ||||||| | ||||| |||| ||||| || |||  |||||||||| |||||||||||    
T  36006901 attagttgtgttgattttaatgataaaattaatattattgactaaaatatccctattaattgtagttagtggggtaattaagtttgatgaaattcaataa 36007000  T
Q  177 ataa 180  Q
    ||||    
T  36007001 ataa 36007004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 1875568 - 1875674
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| | || | ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||| |  ||||||| |||    
T  1875568 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattg 1875667  T
Q  139 ttgttag 145  Q
    | |||||    
T  1875668 tagttag 1875674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 51267 - 51169
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||| | ||||| |||||| | || | ||||||||||||||| |||||||||||| ||| ||||||| | |||||||||||||||    
T  51267 tccgtctctaaataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtatcatttacaaaaa 51169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 13335329 - 13335202
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||| ||| ||||||||||||  |||||||||||| |||||||||  |||| |   |||||| |||  |||||  |||||| ||||||||||     
T  13335329 ttaaggaaatggttaattgtgttgattttgatggtaaaattagtatcatttagtaaaacacatttattaattgcagttagtagagtagttaagtttgatg 13335230  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||||||| |  |||||||||||    
T  13335229 aaattcaataaatcagggtataataatg 13335202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 17824060 - 17823910
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| ||||||||| | ||||||| ||| | ||| | ||||||||||||||| |||||||| |||| ||||| | ||||   |||||| |||    
T  17824060 tagtcgtttaaggtttgtgtattatttttaaggaaaag-ttaatcgtgttgatttcaatgataaaattagtatcttttactagaatacctttattaattg 17823962  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | ||||| | ||||| |||||| ||| ||||| |||||||||  ||||||||    
T  17823961 tagttagtgaagtagttaagttggatgaaattaaataaataatagtataata 17823910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 36967507 - 36967417
Alignment:
Q  33 aaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||| ||||||| ||||| ||| || | || | ||||| ||||||||| ||||||||||||  ||||||||||||||||||||||| ||||    
T  36967507 aaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaa 36967417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 5356725 - 5356660
Alignment:
Q  53 ttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    ||||| |||| |||| || ||||||||| |||||||||||| |||| |||||||||||||||||||    
T  5356725 ttgtgcatgactttttaggaaatgattagttgtgttgattttaatgataaaattaatatcatttac 5356660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 40028624 - 40028556
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgt 139  Q
    |||||||||| || |||||||||||||||||||||||||| ||||||  |||||||  |||||| ||||    
T  40028624 aaaatgattaattatgttgatttcaatggtaaaattaatagcatttattaaaatatcattattaattgt 40028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 26626115 - 26626242
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||| ||  |||||||||||  ||| |||||  ||||||| ||||||| |||| ||||| |||||||    |||  ||     
T  26626115 ttaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttattaaaatatccttattaattgtagttagtggagtagtccggttgaatg 26626214  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  26626215 aaattcaataaataagggtataataatg 26626242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 12559700 - 12559638
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    ||||||||| |||||||||||| |||  ||||||||||| ||||||| |||||||| ||||||    
T  12559700 aaatgattaattgtgttgattttaataataaaattaataccatttactaaaatatttttatta 12559638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 2767443 - 2767476
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattatttc 234  Q
    ||||||||||||||||||||||||||||||||||    
T  2767443 tgttgtattagtattctaaagtgacaattatttc 2767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 44648540 - 44648621
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagta 152  Q
    |||||||||| ||  |||||||||||||||||||||| |||||||||| |||| || |||| || ||||  |||| ||||||    
T  44648540 aaaatgattagtttagttgatttcaatggtaaaattagtatcatttactaaaacatacttactaattgtaattagtggagta 44648621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 1739772 - 1739712
Alignment:
Q  47 taagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    |||| |||||||| || | ||||| |||| |||| ||||||||||||||||||||||||||    
T  1739772 taaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaatta 1739712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 2767294 - 2767378
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggag 150  Q
    ||||| |||| |||| ||||||||||||  |||||||||||| |||||||||  |||| || ||||||| |||| ||||| ||||    
T  2767294 ttaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaacatccttattatttgtagttagtggag 2767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 4924068 - 4924148
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||||| |||| ||||||  |||| ||||||||||||| ||| |||||| |||||||  |||||| |||| ||||    
T  4924068 ttttaagaaaattattagttgtgtatattttaatggtaaaattagtattatttactaaaatatctttattaattgtagtta 4924148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 31331522 - 31331442
Alignment:
Q  65 tttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    |||||| ||||||||| |||| |||||||||||  |||||||| ||| |||||| |||||||  |||||| |||| |||||    
T  31331522 tttaaggaaatgattaattgtattgatttcaattataaaattattattatttactaaaatatcattattaattgtagttag 31331442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 1739613 - 1739542
Alignment:
Q  109 tatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    |||||||||| ||||||||||||||| |||| |||||   ||||| ||| |||||| ||||| |||||||||    
T  1739613 tatcatttaccaaaatattcttattaattgtagttagttaagtagttaattttgatgaaatttaataaataa 1739542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 22771838 - 22771965
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| || |||||| ||| ||||||||  |||||||||||| | |||||||  |||| |  ||||||| |||| ||||| | ||||  || ||| |||     
T  22771838 ttaaggaattgattaattgggttgattttgatggtaaaattagtgtcatttattaaaacacccttattaattgtagttagtgaagtaattatgttggatg 22771937  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  22771938 aaattcaataaataagggtataataatg 22771965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 29226592 - 29226658
Alignment:
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  ||| |||||||    
T  29226592 tcttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaataatg 29226658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 39329152 - 39329086
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatc 112  Q
    ||||| ||||||||  | ||||||||||||||||| ||||||| |||| |||| |||||||| ||||    
T  39329152 ttaagttttgtgtacaatttttaagaaaatgattaattgtgttaattttaatgataaaattagtatc 39329086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 40996368 - 40996482
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||  |  ||||||||| | |||||||| |||| |  ||||||| |||| ||||| | | | | |||||| |||     
T  40996368 ttaaggaaatgattaattgtgttgattttgaatgtaaaattagtttcatttactaaaacacccttattaattgtagttagtgaaatggttaagttggatg 40996467  T
Q  166 aaattcaataaataa 180  Q
    |||||||||||||||    
T  40996468 aaattcaataaataa 40996482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 6611810 - 6611769
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  6611810 ttaaaaaaatgattaattatgttgatttcaatggtaaaatta 6611769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 6796006 - 6796099
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||||||  |||| ||||||| ||||  |||||| | || | |||| ||||||||||   | |||||||| |||||||||||||||||||||||    
T  6796006 tccgtctttaaattatagtcgtttaatgtttgtgcacgattattaataaaatgattaacagcgttgattttaatggtaaaattaatatcattta 6796099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 15809985 - 15810042
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||||| ||  |||||||| ||||||| ||||||||| |||||| ||||    
T  15809985 ttaagaaaatgattagttcagttgattttaatggtagaattaatattatttactaaaa 15810042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 29226234 - 29226275
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    ||||||||||||||| ||||||||||||  ||||||||||||    
T  29226234 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 29226275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 34393957 - 34394014
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||| ||||||||| ||||||||||||  |||||||||||| ||| |||||| ||||    
T  34393957 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtataatttactaaaa 34394014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 10953411 - 10953463
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    ||||| ||||||||| |||||||||||| |||| || |||||||| |||||||    
T  10953411 ttaaggaaatgattaattgtgttgattttaatgatataattaatagcatttac 10953463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 10961416 - 10961468
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    ||||| ||||||||| |||||||||||| |||| || |||||||| |||||||    
T  10961416 ttaaggaaatgattaattgtgttgattttaatgatataattaatagcatttac 10961468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 36007035 - 36007067
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattattt 233  Q
    ||||| |||||||||||||||||||||||||||    
T  36007035 tgttgcattagtattctaaagtgacaattattt 36007067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 39864266 - 39864100
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||  |||||| | || | ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  39864266 tccgtctctaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 39864167  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    || |||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  ||||||||    
T  39864166 tactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataata 39864100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 26093545 - 26093380
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    |||| |||| || |||| |||||||||||| | || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||     
T  26093545 tctctaaataatggtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatatc 26093446  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||||||| |||| ||||| | ||||  |||||| ||| || ||||||||||||  |||||||||||    
T  26093445 cttattaattgtagttagtgaagtaattaagttagatgaagttcaataaataagggtataataatg 26093380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 8896337 - 8896460
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||| ||||| ||||| | |||||| |||     
T  8896337 ttaagaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatatatttattaattgtagttagtggagtggttaagttggatg 8896436  T
Q  166 aaattcaataaataaatgtataat 189  Q
    |||||||||||||||| |||||||    
T  8896437 aaattcaataaataaaggtataat 8896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 6160425 - 6160591
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    |||||||||| ||||||| ||| || ||||||| || ||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||| ||||||     
T  6160425 gtctcaaaataatagtcgtttacgacttgtgtacgatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatac 6160524  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||||||| |||| ||||  ||| ||| ||||||  ||  ||||||||||| ||  |||||||||||    
T  6160525 tcttattaattgtagttaatggaatagttaagttgaatgtaattcaataaacaagggtataataatg 6160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 31978615 - 31978784
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||  |||||| | || | ||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||     
T  31978615 tccgtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaattaatatcacttactaaac 31978714  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||||||||||| || | ||||  ||||||| ||||||  || ||||||| |||||||  |||||||||||    
T  31978715 tattcttattaattatagttaatggagtagttaagttgaattaaattcattaaataagggtataataatg 31978784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 7759328 - 7759201
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| ||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||| ||| ||| ||||||  ||     
T  7759328 ttaaaaaaataattaattgtgttgatttcaatggtgaaattaatatcatttactaaaatactcttattaattgtagttagtggaatagttaagttgaatg 7759229  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  7759228 aaattcaataaataagggtataataatg 7759201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 36702036 - 36701907
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    ||||||| ||||||||| || ||||||||||||||||||||||| |||||||||| |||||   ||||||| |||| ||||| ||| | | |||||||||    
T  36702036 ttttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttga 36701937  T
Q  164 taaaattcaataaataaatgtataataatg 193  Q
    | |||||||||||||||  |||||||||||    
T  36701936 tgaaattcaataaataagagtataataatg 36701907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 36718140 - 36718011
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    ||||||| ||||||||| || ||||||||||||||||||||||| |||||||||| |||||   ||||||| |||| ||||| ||| | | |||||||||    
T  36718140 ttttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttga 36718041  T
Q  164 taaaattcaataaataaatgtataataatg 193  Q
    | |||||||||||||||  |||||||||||    
T  36718040 tgaaattcaataaataagagtataataatg 36718011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 2572623 - 2572455
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||  |||| ||||||| ||||  |||||||| || | |||| | |||||||| |||| ||||||||||||||||||||||||||||||||  |||    
T  2572623 tccgtctttaaattatagtcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaattaatatcatttac-taaa 2572525  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||   |||||| |||| ||||| ||||||| ||||||  || ||||||||||||||||  ||||||||||    
T  2572524 tacaattattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaaatataataatg 2572455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 30754900 - 30755073
Alignment:
Q  20 ttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttaca 119  Q
    |||||| ||||  |||| ||||||| ||||||||| || | || | ||||| ||||||||| |||||||||||| || ||||||||| |||| ||||||     
T  30754900 ttcttctgtctttaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatttatattatttact 30754999  T
Q  120 aaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||||||  |||||| || | ||||| | | ||| |||||| ||| |||||||||||||||| |||||||||||    
T  30755000 aaaatatcattattaattatagttagtgaaatagttaagttagatgaaattcaataaataaaggtataataatg 30755073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 32970534 - 32970683
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    ||||||||| ||| ||| ||||| || || || || | ||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||| |    
T  32970534 tctcaaaataatattcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattatttactaaaatact 32970633  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaa 177  Q
    | ||||| ||||||||||   | ||  |||||| ||||||||||||||||    
T  32970634 cgtattaattgttgttagtaaaataattaagttggataaaattcaataaa 32970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 9307740 - 9307616
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||||||||  |||||||||||||||| ||||||||||| ||||||| |||| |  ||| ||| |||| ||||| ||||||| |||||| |||     
T  9307740 ttaaggaaatgattaactgtgttgatttcaatgataaaattaatagcatttactaaaacacccttgttaattgtagttagtggagtagttaagttggatg 9307641  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||| ||||||||    
T  9307640 aaattcaataaataaaggtataata 9307616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 34031489 - 34031659
Alignment:
Q  24 tccgtctcaaaatgatagtc-gcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaa 122  Q
    |||||||| |||| |||||| | ||||| |||||| |||| | ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |||    
T  34031489 tccgtctctaaattatagtctgtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaattaatatcatttactaaa 34031588  T
Q  123 atattcttattacttgttgttagcggagtagataagtttg-ataaaattcaataaataaatgtataataatg 193  Q
    |||   |||||| |||| ||||| | | ||| |||| ||| || |||||||||||||||  |||||||||||    
T  34031589 ataccgttattaattgtagttagtgtaatag-taaggttgaatgaaattcaataaataagagtataataatg 34031659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 40144852 - 40144979
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||| |  ||||||| |||| ||||  ||||||| |||||| |||     
T  40144852 ttaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttaatggagtagttaagttggatg 40144951  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||  |||| ||||||    
T  40144952 aagttcaataaataagggtattataatg 40144979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 29074999 - 29074885
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||||||  |||| || | ||||| ||||||||| || | ||| |||||| ||    
T  29074999 ttttaaaaaaatgattagttgtgttgattttaatggtaaaattaatatcatttattaaaacatccatattaattgttgttaacgtaatagttaagttgga 29074900  T
Q  164 taaaattcaataaat 178  Q
    | |||||||||||||    
T  29074899 tgaaattcaataaat 29074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 33733221 - 33733394
Alignment:
Q  19 cttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    ||||||||||||| |||| ||||||| ||||  |||||| | || | ||||| ||||||||||| |||||||||||||||||||||||| || |||||||    
T  33733221 cttcttccgtctccaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgattatt-gtgttgatttcaatggtaaaattattaacatttac 33733319  T
Q  119 aaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     |||||| | |||||| |||| |||||  |||| | || ||   || |||||||||||||||  |||||||||||    
T  33733320 taaaatacttttattaattgtagttagtagagtggttaggtagaatgaaattcaataaataagggtataataatg 33733394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 49223992 - 49224118
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataa 166  Q
    |||||||||||||| ||||||||||||  |||||||||||| |||||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| ||| |    
T  49223992 taagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatga 49224091  T
Q  167 aattcaataaataaatgtataataatg 193  Q
    | ||||||||||||  |||| ||||||    
T  49224092 agttcaataaataagggtattataatg 49224118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 15699230 - 15699121
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaatt 170  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| ||| || ||    
T  15699230 aaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagtt 15699131  T
Q  171 caataaataa 180  Q
    ||||||||||    
T  15699130 caataaataa 15699121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 917185 - 917010
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||| |||| ||| |||| ||||||| ||||| |||||| | || | ||||  ||||||||| || ||||||||| |||||||||||||||||||||||    
T  917185 acttcatccgcctctaaattatagtcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaattaatatcattta 917086  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    | ||||||  ||||||| |||| |||||  || ||| ||||||  || ||||| |||||||||  ||| |||||||    
T  917085 ctaaaatacccttattaattgtagttagtagattagttaagttgcatgaaatttaataaataagggtaaaataatg 917010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 12039222 - 12039071
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| | || | ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| || | | |||||||| |||    
T  12039222 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaatacactcttattaattg 12039123  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | ||||  ||||||  |||||| |||  ||||||||||||||  ||||||||    
T  12039122 tagttaatggagtatttaagttggatgtaattcaataaataagggtataata 12039071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 16395052 - 16395178
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||  || ||||||||| |||||||||| ||||||  ||| ||| |||| ||||| ||||||| |||||| |||     
T  16395052 ttaagaaaatgattaattgtgttgattttgatagtaaaattagtatcatttactaaaata-cctttttaattgtagttagtggagtagttaagttagatg 16395150  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||   ||||||||||    
T  16395151 aaattcaataaataatgatataataatg 16395178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 20209845 - 20209972
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || |||||||||  || ||||||||| |||||||||| |||| || ||||||| |||| ||||| ||||||| |||||| |||     
T  20209845 ttaagaaaatgattaattatgttgattttgatagtaaaattagtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttggatg 20209944  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||  |||| ||||||    
T  20209945 aagttcaataaataagggtattataatg 20209972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 41080750 - 41080593
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    |||||||||| ||||||| ||||| ||| || ||||||||||| |||||||||| |||||||||||| ||| |||||||| ||||||||||   ||||||    
T  41080750 gtctcaaaataatagtcgattaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatttatatcatttattgaaatat 41080651  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtat 186  Q
      |||||| ||||  |||| |||| || |||||| |||  ||||||||||||||| ||||    
T  41080650 ctttattaattgtaattagtggag-aggtaagttggat-gaattcaataaataaaggtat 41080593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 24991616 - 24991782
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||| |||||  | || | ||||| ||||||||| ||||||||||||||| |||||||||||||  |||||| | ||    
T  24991616 tccgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattaatagtatttactacaa 24991715  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |   |||||| |||| ||||| ||| ||| |||||| ||| |||||||||||||||| ||||||||    
T  24991716 cacctttattaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataata 24991782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 31042952 - 31042795
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||  ||||| |||||| |||| | ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||   ||    
T  31042952 tccgtctcacaatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactgtaa 31042853  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaa 181  Q
    ||  ||||||| |||| | ||| | ||||  ||||||  || ||||||||||||||||    
T  31042852 tacccttattaattgtaggtagtgaagtaattaagttgaatgaaattcaataaataaa 31042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 3312268 - 3312133
Alignment:
Q  22 cttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaaga-aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaa 120  Q
    ||||||| ||||||| ||||||  ||||||||||| ||| |||||||| | ||||||||| |||||||||||| |||| | |||||| |||||||||| |    
T  3312268 cttccgtttcaaaataatagtcatttaagatttgtatat-aattttaaaagaaatgattaattgtgttgattttaatgattaaattagtatcatttacta 3312170  T
Q  121 aaatattcttattacttgttgttagcggagtagataa 157  Q
     ||||||  ||||| |||| ||||| |||||||||||    
T  3312169 taatattgatattaattgtagttagtggagtagataa 3312133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 13579632 - 13579752
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||  |||  || |||||||||||||||||||| |  | ||||| |||| ||||| ||||||  |||||||||| ||||||    
T  13579632 aaatgattaattgtgttgattttgatgacaatattaatatcatttacaaaaacacccatattaattgtagttagtggagtatttaagtttgatgaaattc 13579731  T
Q  172 aataaataaatgtataataat 192  Q
    |||||||||  ||||||||||    
T  13579732 aataaataagggtataataat 13579752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 38787495 - 38787327
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    ||||||| |||| ||||||| ||||| ||| || | || | ||||| ||||||||  ||||||||||||  ||||||||| || |||||||| | ||||     
T  38787495 ccgtctctaaataatagtcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagtatcatttgccaaaac 38787396  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    || ||||||| || | ||||| ||||||| ||| || ||| |||||||||||||||  |||||||||||    
T  38787395 atccttattaattatagttagtggagtagttaaattggatgaaattcaataaataagggtataataatg 38787327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 24880983 - 24880874
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtag---ataagtttgataaaa 168  Q
    ||||||||  || |||||||||||||||||||||||||||||||||| |||||| | |||||| |||| ||||| |||||||    |||||| ||| |||    
T  24880983 aaatgattgattatgttgatttcaatggtaaaattaatatcatttactaaaatacttttattaattgtagttagtggagtagttagtaagttggatgaaa 24880884  T
Q  169 ttcaataaat 178  Q
    ||||||||||    
T  24880883 ttcaataaat 24880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 9379339 - 9379217
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag-cggagtagataagtttgataaaatt 170  Q
    ||||||||| ||||  |||||| |||| ||||||||||||||||||  |||||||  |||||| |||| |||||  ||||||| |||||||||| |||||    
T  9379339 aaatgattaattgtaatgattttaatgataaaattaatatcatttattaaaatatatttattaattgtagttagtgggagtagttaagtttgatgaaatt 9379240  T
Q  171 caataaataaatgtataataatg 193  Q
     |||||||| | |||||||||||    
T  9379239 taataaatataggtataataatg 9379217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 10495951 - 10495826
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| ||||| |||| || |||||||||  |||||||||||| |||||||||| |||| | | |||||| ||||  |||| ||||||| |||||| |||     
T  10495951 ttaaaaaaattattaattttgttgattttgatggtaaaattagtatcatttactaaaacact-ttattaattgtaattagtggagtagttaagttggatg 10495853  T
Q  166 aaattcaataaataaatgtataataat 192  Q
    ||||||||||||||||| |||||||||    
T  10495852 aaattcaataaataaatatataataat 10495826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 44761522 - 44761662
Alignment:
Q  52 tttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagt 151  Q
    ||||||||||| |  ||| |||||||||| || |||| |||| |||| ||||||||||||||||||| |||||||  |||||| || | ||||| ||| |    
T  44761522 tttgtgtatgattaataaaaaaatgattaattatgttaattttaatgataaaattaatatcatttactaaaatatctttattaattatagttagtggaat 44761621  T
Q  152 agataagtttgataaaattcaataaataaatgtataataat 192  Q
     | ||||||  || |||||||||||||||  ||||||||||    
T  44761622 ggttaagttgaatgaaattcaataaataagggtataataat 44761662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 7351733 - 7351622
Alignment:
Q  82 ttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaa 181  Q
    |||||||||||| |||| |||||||||||| |||||| ||||||  ||||||| || | ||||| ||| ||  |||||| || ||||||||||||||||     
T  7351733 ttgtgttgattttaatgataaaattaatattatttactaaaataaccttattaattctagttagtggaataattaagttggacaaaattcaataaataag 7351634  T
Q  182 tgtataataatg 193  Q
     |||||||||||    
T  7351633 agtataataatg 7351622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 12151314 - 12151195
Alignment:
Q  41 gtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgtt 140  Q
    |||| ||||| ||||||||||| | ||||| | || |||| || |||||||||||||| |||||||| |||||||||| |||||||| | |||| ||||     
T  12151314 gtcgtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtatcatttactaaaatattgtaattaattgta 12151215  T
Q  141 gttagcggagtagataagtt 160  Q
    ||||| |||| || ||||||    
T  12151214 gttagtggagcagttaagtt 12151195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 37276574 - 37276447
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||||||||  |||||||||||  |||||||||||| |||| ||||| |||| |  ||||||| |||| ||||| ||| ||| ||| || |||     
T  37276574 ttaaggaaatgattaactgtgttgattttgatggtaaaattagtatcgtttactaaaacacccttattaattgtagttagtggaatagttaaattggatg 37276475  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  37276474 aaattcaataaataagggtataataatg 37276447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 5179404 - 5179510
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| |||||||||||||||| | ||||| | |||||||||| ||| | ||| ||||| |||| ||||| ||||||||||| || |||     
T  5179404 ttaacaaaatgattaattgtgttgatttcaatagcaaaatgagtatcatttactaaagttttcatattaattgtagttagtggagtagataaattggatg 5179503  T
Q  166 aaattca 172  Q
    |||||||    
T  5179504 aaattca 5179510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 27897082 - 27896944
Alignment:
Q  52 tttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagt 151  Q
    |||||| |||| ||||||| |||| ||||   |||||||||| |||| |||||||| ||| |||||  ||||||||||||||| || | ||||| |||||    
T  27897082 tttgtgcatgatttttaaggaaataattaaacgtgttgattttaatgataaaattagtataatttatcaaaatattcttattaattatagttagtggagt 27896983  T
Q  152 agataagtttgataaaattcaataaataaatgtataata 190  Q
    |  | |||| ||| ||||| |||||||||| ||||||||    
T  27896982 aatttagttggatgaaatttaataaataaaggtataata 27896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 3260748 - 3260580
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatga-attttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattt 116  Q
    |||| |||| |||| |||| ||||||| |||||||||||||||||  ||||||  ||||||||| ||||||||||||||||  ||||| || ||| | ||    
T  3260748 actttttccatctctaaataatagtcgtttaagatttgtgtatgattttttaaagaaatgattagttgtgttgatttcaataataaaagtagtattaatt 3260649  T
Q  117 acaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||     ||  ||||||| |||| ||||| |||| || |||||||||| ||||| ||||||||| | |||||||    
T  3260648 ac-----taaccttattaattgtagttagtggagaagttaagtttgatgaaattgaataaataagtttataata 3260580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 14757610 - 14757723
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||| ||||||||||||||| | |||||||| || ||||||| |||| | |||||||| |||| ||||| | ||||| |||||| ||| ||||| |||||    
T  14757610 attaattgtgttgatttcaacgataaaattagtaacatttactaaaacactcttattaattgtagttagtgaagtagttaagttcgatgaaatttaataa 14757709  T
Q  177 ataaatgtataata 190  Q
    ||||  ||||||||    
T  14757710 ataagggtataata 14757723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 28749124 - 28749047
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||||||| | || | ||||| ||||||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  28749124 ttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 28749047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 23168998 - 23169066
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    |||||||||| |||| |||||||||||||||||||||||||| || ||||||| |||| || |||||||    
T  23168998 ttaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatccttatta 23169066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 27687354 - 27687302
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  27687354 ttaaaaaaatgattagttgtgttgatttcaatggtaaaattaatattatttac 27687302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 35538758 - 35538678
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||||| |||| ||||||||||||||||| ||||||  |||| |||||| ||||||| ||||||| |||| ||||    
T  35538758 ttttaagaaaattattaattgtgttgatttcaatgataaaatggatattatttactaaaatatccttattaattgtagtta 35538678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 22856267 - 22856366
Alignment:
Q  91 tttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||||||  ||||||||||| ||||||| ||||||  || |||| |||| ||||| ||||||| |||| | ||| |||||||||||||||| ||||||||    
T  22856267 tttcaatcataaaattaataccatttactaaaataccctaattaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataata 22856366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 32219695 - 32219790
Alignment:
Q  95 aatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaat-aaataaatgtataat 189  Q
    |||||||||||||||||||||||  |||||| |||||||| || | ||| | ||||| | |||||| ||| ||||||||| |||||||||||||||    
T  32219695 aatggtaaaattaatatcatttattaaaatactcttattaattatagtttgtggagtggttaagttggatgaaattcaataaaataaatgtataat 32219790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 29778425 - 29778515
Alignment:
Q  90 atttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    |||||||||||||||||| |||||||||| |||||||  |||||| |||| |||||   || |  |||||| |||||||||||||||||||    
T  29778425 atttcaatggtaaaattagtatcatttactaaaatatcattattaattgtagttagttaagaacctaagttggataaaattcaataaataa 29778515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 6267821 - 6267922
Alignment:
Q  26 cgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    ||||||||||| ||||||| ||||| |||||| |  | ||||||  ||||||||| |||||||||||| |||| ||||| || |||||| ||| ||||||    
T  6267821 cgtctcaaaataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtatcatgtactaaaata 6267920  T
Q  126 tt 127  Q
    ||    
T  6267921 tt 6267922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 22181449 - 22181392
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  22181449 ttaaggaaatgattagttgagttcatttcaatggtaaaattaatatcatttactaaaa 22181392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 52429451 - 52429330
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||  ||||||| | |||||||| ||||| |||||||  ||||||  ||||||| |||| ||||| ||||||| ||||||  || ||||||    
T  52429451 aaatgattaatttggttgattacgatggtaaatttaatgtcatttattaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaattc 52429352  T
Q  172 aataaataaatgtataataatg 193  Q
    | |||||||  |||||||||||    
T  52429351 attaaataagggtataataatg 52429330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 11450040 - 11449952
Alignment:
Q  22 cttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaata 110  Q
    |||||||||| |||| ||||| | ||||| |||||| | || | ||||| ||||| ||| || ||||||||||||||||||||||||||    
T  11450040 cttccgtctctaaataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaattaata 11449952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 37506240 - 37506110
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaata---tcatttacaaaaatattcttattacttgttgttagcggagtagataagtttg 162  Q
    ||||| ||||||||| ||||||||||||  ||| |||||||| ||   |||||||| |||| | | |||||| |||| ||||| ||||||| ||||||      
T  37506240 ttaaggaaatgattaattgtgttgattttgatgataaaattagtactatcatttactaaaacacttttattaattgtagttagtggagtagttaagttga 37506141  T
Q  163 ataaaattcaataaataaatgtataataatg 193  Q
    || |||||||||||||||  |||| ||||||    
T  37506140 atgaaattcaataaataagggtattataatg 37506110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 42410107 - 42410055
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    |||| |||||||||| ||||||||||||  |||||||||||||||||||||||    
T  42410107 ttaaaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttac 42410055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 6023660 - 6023763
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||| ||| |||||||||||||||||||||| ||| || | ||||| ||||||   |||||| |||| ||||  ||||||| |||||| ||| ||||||    
T  6023660 aaatgtttaattgtgttgatttcaatggtaaatttagtagcttttactaaaatacctttattaattgtagttattggagtagttaagttggatgaaattc 6023759  T
Q  172 aata 175  Q
    ||||    
T  6023760 aata 6023763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 17988561 - 17988643
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaatta--atatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||  |||||| ||||||||||||||||| ||||||||  |||| |||||| |||||| |||||||| |||| ||||    
T  17988561 ttttaagaatgtgattaattgtgttgatttcaatgttaaaattagtatattatttactaaaatactcttattaattgtagtta 17988643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 4441608 - 4441734
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||| |||| ||||| |||||| |||||||||||||||    ||||| |||| |  ||| ||| |||| ||||| ||||||  ||| || |||     
T  4441608 ttaagaaaataattaattgtggtgattttaatggtaaaattaatcgtctttactaaaacacccttgttaattgtagttagtggagtaattaaattagatg 4441707  T
Q  166 aaattcaataaataaatgtataataat 192  Q
    ||||| |||||||||| ||||||||||    
T  4441708 aaatttaataaataaaggtataataat 4441734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 4659877 - 4659831
Alignment:
Q  59 atgaattttaagaaaatgattatttgtgttgatttcaatggtaaaat 105  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  4659877 atgaatattaagaaaatgattaattgtgttgatttcaatgctaaaat 4659831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 44707771 - 44707889
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| || | |||||||||||| |||||||| ||  |||||| |||| |   |||||| |||| ||||| | || || |||||| ||| ||||||    
T  44707771 aaatgattaattatattgatttcaatgataaaattagtagtatttactaaaacacatttattaattgtagttagtgaagcagttaagttggatgaaattc 44707870  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||| ||||||||    
T  44707871 aataaataaaggtataata 44707889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 45331454 - 45331376
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||| |||| || |||||||||  ||||||||||||||||||||||| |||| |  ||||||| |||| ||||    
T  45331454 ttaagaaaataattaattatgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagtta 45331376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 2137428 - 2137501
Alignment:
Q  120 aaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    |||||| | |||||| |||||||||  ||||||  |||||| ||||||||||||||||||||  ||||||||||    
T  2137428 aaaatacttttattaattgttgttattggagtatttaagttggataaaattcaataaataaagatataataatg 2137501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 41121836 - 41121917
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtag 153  Q
    ||||||||| ||||||||||||  ||||||||||||  || |||||| ||||||  ||||||| |||| ||||| |||||||    
T  41121836 aaatgattaattgtgttgattttgatggtaaaattagcataatttactaaaatacccttattaattgtagttagtggagtag 41121917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 43614512 - 43614451
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaata 125  Q
    ||||||| |||||||||  ||||||||||| ||||||||||||| ||||||| || ||||||    
T  43614512 ttttaaggaaatgattaagtgtgttgattttaatggtaaaattagtatcattgactaaaata 43614451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 978862 - 978901
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaat 105  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  978862 ttaagaaaatgattagttgtgttgatttcaatgataaaat 978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 6785304 - 6785245
Alignment:
Q  131 attacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||| |||| ||||| ||||||| |||||||||| |||||||||||||||  ||||||||    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataata 6785245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 35367853 - 35367791
Alignment:
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    ||||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||  ||||||||    
T  35367853 cttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataata 35367791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 52837364 - 52837266
Alignment:
Q  95 aatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||||||||||||||| |||  ||| |||||| |||||||| |||| | ||| ||||||| |||  |  || ||||||||||| |||| |||||||||||    
T  52837364 aatggtaaaattaatttcaactactaaaatactcttattaattgtagctagtggagtagttaatatgaatgaaattcaataattaaaggtataataatg 52837266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 35367650 - 35367691
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    ||||||||||||||| ||||||||||||  ||||||||||||    
T  35367650 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 35367691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 116
Target Start/End: Original strand, 39395018 - 39395047
Alignment:
Q  87 ttgatttcaatggtaaaattaatatcattt 116  Q
    ||||||||||||||||||||||||||||||    
T  39395018 ttgatttcaatggtaaaattaatatcattt 39395047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 39887859 - 39887826
Alignment:
Q  155 taagtttgataaaattcaataaataaatgtataa 188  Q
    |||||||||| |||||||||||||||||||||||    
T  39887859 taagtttgatgaaattcaataaataaatgtataa 39887826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 29074850 - 29074806
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattatttcaaaacagaaaa 245  Q
    ||||||||| ||||| ||||||||||||||||| || ||||||||    
T  29074850 tgttgtatttgtattataaagtgacaattattttaagacagaaaa 29074806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 31154244 - 31154200
Alignment:
Q  63 attttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    ||||||| |||||||||| |||||||||||| |||| ||||||||    
T  31154244 attttaataaaatgattaattgtgttgattttaatgataaaatta 31154200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 49224134 - 49224166
Alignment:
Q  201 tgttgtattagtattctaaagtgacaattattt 233  Q
    ||||| |||||||||||||||||||||||||||    
T  49224134 tgttgcattagtattctaaagtgacaattattt 49224166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 83547 - 83378
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| ||| || |  | | ||||| ||||||||| ||||||||||||  |||||||||||| |||||||||| ||||    
T  83547 tccgtctctaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 83448  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     |||||||||| |||| ||||||||||||| |||||||||| |||||||||||||||  |||| ||||||    
T  83447 cattcttattaattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatg 83378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 26974193 - 26974022
Alignment:
Q  22 cttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaata---tcatttac 118  Q
    |||||||||| |||| ||||||| ||||| |||||| | || | ||||| ||||||||| |||||||||||||||||||||||||||||   ||||||||    
T  26974193 cttccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatcatttac 26974094  T
Q  119 aaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |||||| |||||||| |||| ||||| ||||||| ||||||  || ||||| | |||||||||||||||||    
T  26974093 taaaatactcttattaattgtagttagtggagtagttaagttgaatgaaatttattaaataaatgtataata 26974022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 34947662 - 34947493
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| |||||| |||  | ||||  ||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  34947662 tccgtctctaaataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaattattatcatttactaaaa 34947563  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     |  ||||||| |||| ||||| ||||||| |||||| ||| ||||||||||||| |  |||||||||||    
T  34947562 cacccttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataatg 34947493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 759100 - 759227
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||  ||||||||| || |||||||||| |||| || ||||||| |||| ||||||||||||| |||||| |||     
T  759100 ttaaggaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttattaattgtagttagcggagtagttaagttggatg 759199  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  759200 aaattcaataaataagggtataataatg 759227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 9786150 - 9785983
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| | |||| | || | ||||| ||||||||| ||||||||||||  |||||||||||||| |||||||| ||||    
T  9786150 tccgtctctaaataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatttcatttactaaaa 9786051  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataa 191  Q
     |  ||||||| |||| ||||| | ||||| |||||| |||||||||||||||||||  |||||||||    
T  9786050 cacgcttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataataa 9785983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 30866081 - 30865960
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||| |||||| |||||||| || |  |||| ||||||| |||||| ||| ||||||    
T  30866081 aaatgattaattgtgttaatttcaatggtataattaatatcatttactaaaatactcttattaattataattagtggagtagttaagttagatgaaattc 30865982  T
Q  172 aataaataaatgtataataatg 193  Q
    ||||||||||  ||||||||||    
T  30865981 aataaataaagatataataatg 30865960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 24516298 - 24516413
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| |||||||||||||||||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| |||     
T  24516298 ttaataaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaaaaaccttattaattgtagttagtggagtagttaagttggatg 24516397  T
Q  166 aaattcaataaataaa 181  Q
    ||||||||||||||||    
T  24516398 aaattcaataaataaa 24516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 28202318 - 28202445
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||| |||| ||||||||||||  |||||||||||||| |||||||| |||| || ||||||| |||| ||||| |||||||  ||||| |||     
T  28202318 ttaagaaaataattaattgtgttgattttgatggtaaaattaatgtcatttactaaaacatccttattaattgtagttagtggagtagtaaagttggatg 28202417  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  28202418 aaattcaataaataagagtataataatg 28202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 38391868 - 38391741
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||  |||||||||||| |||||||||| |||| | |||| ||| |||| ||||| ||| ||  |||||| |||     
T  38391868 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacactcttgttaattgtagttagtggaataattaagttggatg 38391769  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||| |||||||||||    
T  38391768 aaattcaataaataaaagtataataatg 38391741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 41506074 - 41506198
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||| |||| ||||||||||||| || ||||||| |||| | |||||||| |||| ||||| ||||||| |||||| |||     
T  41506074 ttaaggaaatgattaattgtgttaattttaatggtaaaattagtagcatttactaaaacactcttattaattgtagttagtggagtagttaagttggatg 41506173  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  41506174 aaattcaataaataagagtataata 41506198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 193
Target Start/End: Original strand, 3178193 - 3178340
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    ||||| |||||| |||| | ||||| ||||||||  ||||||||||||  ||||||||||||||||||||||| |||| |   |||||| |||| |||||    
T  3178193 ttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaattaatatcatttactaaaacacctttattaattgtagttag 3178292  T
Q  146 cggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     ||||||| |||||| ||| |||||||||||||||  ||||| |||||    
T  3178293 tggagtagttaagttggatgaaattcaataaataagggtatattaatg 3178340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 16904538 - 16904375
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    |||||||||| ||||||| ||||| |||||| |  | ||||||||||||||||| |||||||||||||||| ||||||||| ||||| || | ||||||     
T  16904538 gtctcaaaataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaattattatcactttctaaaatac 16904439  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    || ||||| || | ||||| | | ||  |||||| ||| |||||||||||||||  ||||||||    
T  16904438 tcgtattaattatagttagtgaaataattaagttggatcaaattcaataaataagggtataata 16904375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 17828360 - 17828486
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||| ||||| ||||||  |||||| |||     
T  17828360 ttaaggaaacgattatttttgttgatttcaatggtaaaattaatatcatttacaaaattactcttatcaattgtagttagtggagtaattaagttggat- 17828458  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
     ||||||||||||||   ||||||||||    
T  17828459 gaattcaataaataatgatataataatg 17828486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 21390415 - 21390288
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||| ||||  ||||||||| ||||||||||||| |||| || ||||||  |||| ||||| ||||||| |||||| |||     
T  21390415 ttaaggaaatgattaattgtgttaattttgatggtaaaactaatatcatttactaaaacatccttattgattgtagttagtggagtagttaagttagatg 21390316  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  21390315 aaattcaataaataagggtataataatg 21390288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 32346077 - 32346188
Alignment:
Q  82 ttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaa 181  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| || |  |||| ||||||| ||||||  || |||||||||||||||     
T  32346077 ttgtgttgatttcaatggtaaaattaatatcatctactaaaatactcttattaattataattagtggagtagttaagttgaatgaaattcaataaataag 32346176  T
Q  182 tgtataataatg 193  Q
     |||||||||||    
T  32346177 ggtataataatg 32346188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 49101806 - 49101657
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac---aaaaatattcttattacttgttgt 142  Q
    ||||| ||||| || || ||||||||||||||||| ||||||| |||| || | |||||||||||||||||||    |||||| || ||||| |||| ||    
T  49101806 ttaaggtttgtttacgatttttaagaaaatgattaattgtgtttattttaaggataaaattaatatcatttactattaaaatactcatattaattgtagt 49101707  T
Q  143 tagcggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
    ||| ||||||| ||||||  || |||||||||||||||| ||||||||||    
T  49101706 tagtggagtagttaagttgaatgaaattcaataaataaaagtataataat 49101657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 22738815 - 22738697
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||| || |||| |||| |||||  || ||| |||||| ||| |||||     
T  22738815 aaatgattaattgtgtagatttcaatggtaaaattagtatcatttactaaaatatcctcattaattgtagttagtagattagttaagttggatgaaattt 22738716  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||| ||||||||    
T  22738715 aataaataaaggtataata 22738697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 28103895 - 28103729
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  | |||| ||||| |||||| | || | ||||||||||||||| ||||||||||||||||||||||||||  | ||||||| ||||    
T  28103895 tccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcatttaccaaaa 28103796  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |  ||||||| |||| ||||| | ||| | |||||| ||| |||||||||||||||  ||||||||    
T  28103795 cacccttattaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataata 28103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 34100514 - 34100680
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||| | |||||||||||  | || | ||||||||||||||| |||||||||||||||| ||||||||| || ||||||| ||||    
T  34100514 tccgtctcacaatattagttgtttaagatttgtcaacgattattaagaaaatgattaattgtgttgatttcaatagtaaaattagtagcatttactaaaa 34100613  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||  |||||| |||| ||||  | ||||| |||||| ||| | |||||||||||||  ||||||||    
T  34100614 tatctttattaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataata 34100680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 23670595 - 23670482
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| |||| | |||||||| | || ||||| ||||||| |||||||||| ||||| |||||    
T  23670595 attaattgtgttgatttccatggtaaaattaatagcatttactaaaacactcttattaatggtagttagtggagtagttaagtttgatgaaatttaataa 23670496  T
Q  177 ataaatgtataata 190  Q
    ||||  ||||||||    
T  23670495 ataagagtataata 23670482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 43874037 - 43873916
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||| |||| |  |||||||  ||| ||||| ||||||| |||||| ||| || ||     
T  43874037 aaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggatgaagttt 43873938  T
Q  172 aataaataaatgtataataatg 193  Q
    ||||||||||||||| ||||||    
T  43873937 aataaataaatgtattataatg 43873916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 11373437 - 11373561
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| |||     
T  11373437 ttaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatg 11373536  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  11373537 aaattcaataaataagagtataata 11373561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 33819334 - 33819210
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||  | |||||||| |||||||| | |||||||  |||||  ||     
T  33819334 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacaaaatcactcttattaattgttgtttgtggagtagtgaagttgaatg 33819235  T
Q  166 aaattcaataaataaatgtataata 190  Q
    ||||||| |||||||  ||||||||    
T  33819234 aaattcattaaataagggtataata 33819210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 7463333 - 7463218
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||||||| |||||||| || |||||||  |||||  || |||| |||| ||||| ||||||| |||||| |||     
T  7463333 ttaaggaaatgattaattgtgttgatttcaatgataaaattagtagcatttacttaaataccctcattaattgtagttagtggagtagttaagttggatg 7463234  T
Q  166 aaattcaataaataaa 181  Q
    ||||||||||||||||    
T  7463233 aaattcaataaataaa 7463218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 13962079 - 13961965
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| |||||||||||| |||| |||||||||||||| |||  ||||||| |||||||  ||| ||||| ||||||| |||||| |||     
T  13962079 ttaaggaaatgattaattgtgttgattttaatgataaaattaatatcacttaataaaatatccttattaagtgtagttagtggagtagttaagttggatg 13961980  T
Q  166 aaattcaataaataa 180  Q
    ||||| |||||||||    
T  13961979 aaatttaataaataa 13961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 21759966 - 21760103
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| |||| | ||||||||||||||| ||||||||||||  |||||||||||| |||||||||  |||| |  |||| || |||    
T  21759966 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacacccttactaattg 21760065  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataa 176  Q
    | ||||  ||||||| |||||| ||| |||||||||||    
T  21760066 tagttaatggagtagttaagttggatgaaattcaataa 21760103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 32018682 - 32018835
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    |||| ||||| ||||||  |||| |||| |||| || ||||||  |||||| || |||||||||||||||| ||||||||  |||||||||| ||||||     
T  32018682 gtcttaaaataatagtcatttaaaatttttgtacgatttttaatgaaatgaataattgtgttgatttcaatagtaaaatttctatcatttactaaaatac 32018781  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    |||||||| |||| |||||  |||||  |||||| ||| ||||| |||||||||    
T  32018782 tcttattaattgtcgttagtagagtaattaagttggattaaatttaataaataa 32018835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 32018909 - 32019039
Alignment:
Q  51 atttgtgtatgaattttaagaaaatgattatttgtgttga-tttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcgga 149  Q
    |||| |||| || ||||||  ||||||||| ||||||||| ||| ||| ||||||||  |||||||||| |||||| |||||||| |||||||||| |||    
T  32018909 atttctgtacgatttttaatgaaatgattaattgtgttgattttgaatagtaaaatttctatcatttactaaaatactcttattaattgttgttagtgga 32019008  T
Q  150 gtagataagtttgataaaattcaataaataa 180  Q
    |||  |||||| ||| ||||| |||||||||    
T  32019009 gtaattaagttggatgaaatttaataaataa 32019039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 2850848 - 2850949
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||| | |||||| |||| | ||||| ||||||||| || |||||||||||||| |||||||||||| |||||| ||||    
T  2850848 tccgtctctaaattatagtcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattatttactaaaa 2850947  T
Q  124 ta 125  Q
    ||    
T  2850948 ta 2850949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 8592401 - 8592573
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||| ||||||||| |||  ||| || ||||| |||||| |||| | ||||  ||||||||| ||||||||||||||||||| |||||| ||  |||||    
T  8592401 acttcatccgtctcacaatattagccgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagtagtattta 8592500  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
      |||| |  ||||||| |||| ||||| |||||||  ||||| ||| ||||| |||||||||  ||||||||    
T  8592501 ataaaacacccttattaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataata 8592573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 42935781 - 42935697
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggag 150  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||| |  ||||||| |||| ||||| ||||    
T  42935781 ttaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttagtggag 42935697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 27921108 - 27920981
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || ||||||||| ||||||||||||| |||||||||  |||| | |||||||| |||| ||||| | | ||| |||||| |||     
T  27921108 ttaagaaaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacactcttattaattgtagttagtgcattagttaagttggatg 27921009  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || |||||| |||||  |||| ||||||    
T  27921008 aagttcaatcaataagagtattataatg 27920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 44180367 - 44180268
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||| ||| |  | || | ||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||||    
T  44180367 tccgtctctaaataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataatttactaaaa 44180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 2459589 - 2459467
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||   |||||||| | || |  ||||||| |||| ||||| ||||||| |||||  |||     
T  2459589 ttaaggaaatgattaattgtgttgatttcaacggtaaaatta--gtcatttactacaacacccttattaattgtagttagtggagtagttaagtaggatg 2459492  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  2459491 aaattcaataaataagggtataata 2459467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 5524500 - 5524373
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||  |||| | | |||||| || | |||||  |||||| |||||| |||     
T  5524500 ttaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttaataaaacacttttattaattatagttagttgagtagttaagttggatg 5524401  T
Q  166 aaat---tcaataaataaatgtataata 190  Q
    ||||   | |||||||||| ||||||||    
T  5524400 aaatttattaataaataaaggtataata 5524373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 21350645 - 21350758
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||| ||||||||||||||||||||||| || |   |||||| |||| |  ||||||| |||| ||||| ||||||| |||||| ||| |||||||||||    
T  21350645 attaattgtgttgatttcaatggtaaaaatagttgtatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattcaataa 21350744  T
Q  177 ataaatgtataata 190  Q
    ||||  ||||||||    
T  21350745 ataagggtataata 21350758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 7457430 - 7457554
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| || ||||||||||||||||||||||| |  ||||||| |||| |  |||||||  ||| ||||||||| ||  ||||||  ||     
T  7457430 ttaaaaaaatgattaattatgttgatttcaatggtaaaattagttacatttactaaaagacccttattaaatgtagttagcggaataattaagttaaatt 7457529  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||||||  ||||||||    
T  7457530 aaattcaataaataagagtataata 7457554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 19271742 - 19271866
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||| |||||||||| ||||||||||||||||| | |||||| |  |||| || |||||| | |||||| |||| ||||| ||||||| |||||| |||     
T  19271742 ttaaaaaaatgattaattgtgttgatttcaatgatcaaattagtggcattgactaaaatacttttattaattgtagttagtggagtagttaagttggatg 19271841  T
Q  166 aaattcaataaataaatgtataata 190  Q
    ||| | |||||||||  ||||||||    
T  19271842 aaaattaataaataagggtataata 19271866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 29835423 - 29835546
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| || ||||||||| ||||||||||||| || ||||||| |||| | |||||||| |||  |||| |||||||| | |||| |||     
T  29835423 ttaaggaaatgattaattatgttgatttaaatggtaaaattagtagcatttactaaaacactcttattaattgcagttaacggagtag-ttagttggatg 29835521  T
Q  166 aaattcaataaataaatgtataata 190  Q
     |||||||||||||||  |||||||    
T  29835522 taattcaataaataaagatataata 29835546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 35333147 - 35333051
Alignment:
Q  82 ttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaat 178  Q
    ||||||||||||||||  || ||||||||| |||||  |||||||| |||||| |||| ||||| ||||||| |||||| ||| |||||||| ||||    
T  35333147 ttgtgttgatttcaattatataattaatattatttattaaaatattattattaattgtagttagtggagtagttaagttagatgaaattcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 37245808 - 37245686
Alignment:
Q  67 taagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataa 166  Q
    |||||||| ||||| || ||||||||||||||||||| ||| || ||||||| |||| | |||||||| ||||  | || ||||| | |||||| ||| |    
T  37245808 taagaaaaagattaattctgttgatttcaatggtaaa-ttagtagcatttactaaaacactcttattaattgtaataagtggagtggttaagttggatga 37245710  T
Q  167 aattcaataaataaatgtataata 190  Q
    ||||||||||||||  ||||||||    
T  37245709 aattcaataaataagggtataata 37245686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 31665730 - 31665840
Alignment:
Q  71 aaaatgattatttgtgttgatttcaatggtaaaattaa-tatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaat 169  Q
    ||||| |||| |||||||||||| |||||||||||||| | |||||||| |||||||  |||||| | || |||||  |||||| ||| || |||||| |    
T  31665730 aaaataattagttgtgttgattttaatggtaaaattaattttcatttactaaaatatatttattaatagtagttagtagagtagttaaattagataaatt 31665829  T
Q  170 tcaataaataa 180  Q
    |||||||||||    
T  31665830 tcaataaataa 31665840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 46478308 - 46478426
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||| |||| ||| ||||| ||| || ||||||| ||||||  ||||||| |||| ||||   |||||| |||||| ||| ||||||    
T  46478308 aaatgattaattgtgttaattttaatagtaaagttagtagcatttactaaaatacccttattaattgtagttaattgagtagttaagttggatgaaattc 46478407  T
Q  172 aataaataaatgtataata 190  Q
    |||||||||  ||||||||    
T  46478408 aataaataagagtataata 46478426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 19060368 - 19060461
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||||||| |||| ||||||| ||||  ||||||||| | ||| ||  ||||||||| |||||||||||| ||| ||||||||||||| |||||    
T  19060368 tccgtctctaaataatagtcgtttaaagtttgtgtataattttgaaagaaatgattaattgtgttgatttaaattgtaaaattaatattattta 19060461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 25571496 - 25571413
Alignment:
Q  109 tatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
    |||||||||| ||||||  ||||||| |||| ||||| ||| ||| |||||| ||| |||||||||||||||  ||||||||||    
T  25571496 tatcatttactaaaatacccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataat 25571413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 39452445 - 39452391
Alignment:
Q  85 tgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgt 139  Q
    ||||||||| |||||||||||||||||||||||| ||||||  ||||||| ||||    
T  39452445 tgttgattttaatggtaaaattaatatcatttactaaaatacccttattaattgt 39452391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 31930523 - 31930622
Alignment:
Q  83 tgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggag--tagataagtttgataaaattcaataaataa 180  Q
    ||||||||||| |||||||||| |||| | ||||   ||||||  ||||||| |||| ||||| ||||  ||| |||||||||| |||||||||||||||    
T  31930523 tgtgttgattttaatggtaaaactaatctaattttttaaaatacccttattaattgtagttagtggagtatagttaagtttgatgaaattcaataaataa 31930622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 6494963 - 6495070
Alignment:
Q  86 gttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgta 185  Q
    ||||||||  |||||||||||| | | |||||| |||| | | |||||| |||| ||||| |||||||  ||||| ||| ||||| |||||||||  |||    
T  6494963 gttgattttgatggtaaaattagtgttatttactaaaacacttttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggta 6495062  T
Q  186 taataatg 193  Q
    ||||||||    
T  6495063 taataatg 6495070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 39308708 - 39308649
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||||||||||||  || |||||||| ||| ||||||||||||| |||||| ||||    
T  39308708 ttttaagaaaatgattagatgagttgattttaatagtaaaattaatattatttactaaaa 39308649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 40076429 - 40076324
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||| ||||  |||||||||||| |||||||||| |||| | | |||||| ||||  |||   || ||| |||||| ||| ||||||    
T  40076429 aaatgattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactattattaattgtactta---gattagttaagttggatgaaattc 40076333  T
Q  172 aataaataa 180  Q
    |||||||||    
T  40076332 aataaataa 40076324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 17610567 - 17610615
Alignment:
Q  86 gttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    |||||||| ||||||||||||| ||| |||||  |||||||||||||||    
T  17610567 gttgattttaatggtaaaattagtataatttattaaaatattcttatta 17610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 30107236 - 30107184
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    |||||||||| |||| ||  |||||||| ||||||||||||||||| ||||||    
T  30107236 ttaagaaaataattagtttagttgattttaatggtaaaattaatattatttac 30107184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 5541 - 5382
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    |||| |||| ||| ||| ||||| |||||  |||| | |||||||||||||||  |||||||| ||||||||||||||||||||||||||| |||||||     
T  5541 tctctaaattataatcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatcatttactaaaatatc 5442  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtata 187  Q
    ||||||| || | ||||| ||||||| |||||| ||| |||||||||||||||| |||||    
T  5441 cttattaattttagttagtggagtagttaagttggatgaaattcaataaataaaggtata 5382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 31894169 - 31894335
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  || ||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  31894169 tccgtctcacaatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 31894268  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
      |  |||||| |||| ||||| | ||||| |||||| ||| ||||| |||||||||  ||||||||    
T  31894269 cgtcattattaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataata 31894335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 29363419 - 29363292
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||  ||||||||| || |||||||||| |||| || ||||||| |||| ||||||||| ||| |||||| |||     
T  29363419 ttaagaaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttattaattgtagttagcggattagttaagttggatg 29363320  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  29363319 aaattcaataaataagagtataataatg 29363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 13087643 - 13087516
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||| || | ||||| | ||||  |||||| |||     
T  13087643 ttaagaaagtgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacatccttattaattatagttagtgaagtaattaagttggatg 13087544  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||   ||||||||||    
T  13087543 aaattcaataaataagaatataataatg 13087516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 1955980 - 1956106
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||| ||||| |||| ||||||||||||||||||||| |||||||||| || ||| |||||||| |||| ||||| | ||||| |  ||| ||||    
T  1955980 ttaagaaaaagattaattgtattgatttcaatggtaaaattagtatcatttactaatatactcttattaattgtagttagtgaagtagctgtgttcgata 1956079  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||||||||||| || |||||||||||    
T  1956080 aaattcaataaat-aaggtataataatg 1956106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 11655947 - 11656074
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||  |||||||||||| | |||||||| |||| |  ||||||| |||| ||||| |||||||  ||||| |||     
T  11655947 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacccttattaattgtagttagtggagtagtaaagttggatg 11656046  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  11656047 aaattcaataaataagggtataataatg 11656074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 1063568 - 1063727
Alignment:
Q  30 tcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattct 129  Q
    |||||||  |||||| ||||  ||| ||||| | ||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||| |||||| |||    
T  1063568 tcaaaatagtagtcgtttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactct 1063667  T
Q  130 tattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataat 189  Q
     | || |||| ||||| ||||||| ||||||  || ||||| ||||| |||  |||||||    
T  1063668 gagtaattgtagttagtggagtagttaagttaaatgaaatttaataagtaagggtataat 1063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 7920390 - 7920228
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    |||||||||| |||  || |||||||||||| | || ||||||  ||||||||| || |||||||||||||||||||||||| | ||||||| ||||||     
T  7920390 gtctcaaaataatatccgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaattaaaaccatttactaaaata- 7920292  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||||||| |||| ||||| | ||||  ||| ||  || |||||||||||||||  ||||||||    
T  7920291 tcttattaattgtagttagtgaagtatttaatttgaatgaaattcaataaataatggtataata 7920228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 13909537 - 13909410
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| |||||||||  ||||||||||||||||||||||||| |  ||||||| ||||||  ||||||| |||| ||||| ||||||  |||||| |||     
T  13909537 ttaaggaaatgattaaatgtgttgatttcaatggtaaaattagtgacatttactaaaatacccttattaattgtagttagtggagtaattaagttagatg 13909438  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    ||||| |||||||||  |||||||||||    
T  13909437 aaattgaataaataagagtataataatg 13909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 1225180 - 1225035
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    |||||| ||||| | || ||||||  ||||||||| |||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| || | |||||    
T  1225180 ttaagagttgtgcacgagttttaaagaaatgattaattgtgttgatttaaatagtaaaattaatattatttactaaaatattcttattaattttagttag 1225081  T
Q  146 cggagtagataagtttgataaaattcaataaataaatgtataataat 192  Q
     | || || |||||| ||| ||||| |||||||||  ||||||||||    
T  1225080 tgaagaagttaagttggat-aaattgaataaataagggtataataat 1225035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 3291730 - 3291896
Alignment:
Q  27 gtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatat 126  Q
    ||||| |||| ||||||| ||||| ||| || | || | ||||| ||||||||| |||| | ||||| |||||||| |||| ||| |||||| ||||||     
T  3291730 gtctctaaataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtattatttactaaaatac 3291829  T
Q  127 tcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
      |||||| |||| ||||| | ||||| |||||| ||||||||||||||||||| ||||||| ||||    
T  3291830 ctttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtataacaatg 3291896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 24983450 - 24983564
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| ||| |||||||||||||||||||||| | |||||||| |||| |  ||||||| |||| ||||| ||||||| |||||| | |     
T  24983450 ttaaggaaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagttagtggagtagttaagttgggtg 24983549  T
Q  166 aaattcaataaataa 180  Q
    |||||||||||||||    
T  24983550 aaattcaataaataa 24983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 5302464 - 5302351
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    |||||||||||||||  |||||||||||  |||||||||||||||| |||||| |||| || ||||||| |||| ||||  ||||||| |||||| |||     
T  5302464 ttaagaaaatgattaaatgtgttgattttgatggtaaaattaatataatttaccaaaacatccttattaattgtagttaatggagtagttaagttggatg 5302365  T
Q  166 aaattcaataaata 179  Q
    || |||||||||||    
T  5302364 aagttcaataaata 5302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 6802082 - 6801917
Alignment:
Q  28 tctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatatt 127  Q
    |||| |||| ||||||| ||||||||  || |||  | ||||||||||||||| || |||||||||  ||||||||||||||||||||||| ||||        
T  6802082 tctctaaataatagtcgtttaagattgatgcatggttattaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacgcc 6801983  T
Q  128 cttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
    ||||||| |||| ||||| ||||||| |||||| ||| || ||| ||||||||  |||| ||||||    
T  6801982 cttattaattgtagttagtggagtagttaagttggatgaagttcgataaataagggtattataatg 6801917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 17829094 - 17828939
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||||||| ||||||  ||||| ||||||||| | ||||||| |||| |||| | ||||| |||||||  |||||||||||||||||||| ||||    
T  17829094 tccgtctcaaaataatagtcttttaaggtttgtgtat-agttttaaggaaattattaatagtgttaatttcaacagtaaaattaatatcatttactaaaa 17828996  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
    |||  |||||| |||| ||||| | ||||  |||||| ||| ||||| ||| |||||    
T  17828995 tatctttattaattgtagttagtgaagtaattaagttggatgaaatttaattaataa 17828939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 15058257 - 15058106
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttg 138  Q
    |||||| ||||| |||||| | || | ||||||||||||||| ||  ||| |||||||||||||||||| |  ||||||| ||||||  ||||||| |||    
T  15058257 tagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcatttactaaaatacccttattaattg 15058158  T
Q  139 ttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | ||||| | ||||  |||||| ||| |||||||||||||||  ||||||||    
T  15058157 tagttagtgaagtatttaagttggatgaaattcaataaataagggtataata 15058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 23142780 - 23142669
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| ||||||||||||||||||||||| || |  ||||||| |||| |  ||||||| |||| | ||| ||||||| |||| | |||     
T  23142780 ttaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcatttactaaaacacccttattaattgtaggtagtggagtagttaagctagatg 23142681  T
Q  166 aaattcaataaa 177  Q
    ||||||||||||    
T  23142680 aaattcaataaa 23142669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 7072299 - 7072221
Alignment:
Q  40 agtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttac 118  Q
    ||||| ||||| ||||||||| | |||||||||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  7072299 agtcgtttaaggtttgtgtataatttttaagaaaataattaattgtgttgattttaatggtaaaattagtgtcatttac 7072221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 3720201 - 3720366
Alignment:
Q  25 ccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaat 124  Q
    |||||||| |||  |||||| ||||| |||||| | || | ||||  ||||||||| ||||||||||||||||  |||||||  ||  |||||||||||     
T  3720201 ccgtctcacaatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatttgtagtatttacaaaaac 3720300  T
Q  125 attcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | |||||||| |||| ||||| ||| ||| ||||||  || ||||||| |||||||  ||||||||    
T  3720301 actcttattaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataata 3720366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 32440604 - 32440773
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||| |||| ||||||| ||||||||| || | |  | || || ||||||||| ||||||||||||  |||||||||||| ||| |||||| ||||    
T  32440604 tccgtctctaaataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtattatttactaaaa 32440703  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     |  ||||||| ||||  ||||  |||||| |||||| ||| ||||  |||||||||| ||| |||||||    
T  32440704 cacccttattaattgtaattagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatg 32440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 1781915 - 1781793
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || ||||||| ||||||||||||||| || ||||||| |||| |  ||||||| |||| ||||| ||||| | ||||||  ||     
T  1781915 ttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagt-gttaagttgaatg 1781817  T
Q  166 aaattcaataaataaatgtataata 190  Q
    |||||||||||| ||| ||||||||    
T  1781816 aaattcaataaa-aaaggtataata 1781793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 4581986 - 4582050
Alignment:
Q  70 gaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    |||||| ||||  ||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  4581986 gaaaataattagctgtgttgattttaatggtaaaattaatatcatttactaaaatattcatatta 4582050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 30717013 - 30716886
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| || | |||| ||  |||||||||||| ||||||||||  ||| |  ||||||| |||| ||||| |||||||  ||||| ||||    
T  30717013 ttaaggaaatgattaattttattgactttgatggtaaaattagtatcatttacttaaacacccttattaattgtagttagtggagtagtaaagttggata 30716914  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||| ||||||    
T  30716913 aaattcaataaataagagtattataatg 30716886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 21010290 - 21010159
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttg----ttagcggagtagataagttt 161  Q
    ||||||||||||||| ||||||| ||||  |||| ||||||| |||||||||| |||| |  ||||| | |||| |    |||| ||||||| ||||||     
T  21010290 ttaagaaaatgattaattgtgttaattttgatggaaaaattagtatcatttactaaaacacccttataaattgtagttaattagtggagtagttaagttg 21010191  T
Q  162 gataaaattcaataaataaatgtataataatg 193  Q
    ||| |||||||||||||||  |||||||||||    
T  21010190 gatgaaattcaataaataacagtataataatg 21010159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 181658 - 181545
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||| |||| ||||||||||| ||||||||| ||  |||||| |||| ||  |||||| || | ||||| ||||||| |||||| ||| |||||||||||    
T  181658 attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatcattattaattatagttagtggagtagttaagttggatgaaattcaataa 181559  T
Q  177 ataaatgtataata 190  Q
    ||||  ||||||||    
T  181558 ataagggtataata 181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 4590610 - 4590667
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttatta 134  Q
    |||| |||||||||||||||| |||||||||||||| ||||| ||||||||| |||||    
T  4590610 attaattgtgttgatttcaatagtaaaattaatatcgtttactaaaatattcatatta 4590667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 34657626 - 34657687
Alignment:
Q  129 ttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    |||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||||||||||||    
T  34657626 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataata 34657687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 15582389 - 15582282
Alignment:
Q  73 aatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattca 172  Q
    |||||||| |||||||||||||||||||||||| | |||||||||  ||||||   ||| |  |||| ||||| | ||| | ||||||| || |||||||    
T  15582389 aatgattaattgtgttgatttcaatggtaaaatcagtatcatttattaaaatacatttacttgttgtagttagtgaagtggttaagtttaatgaaattca 15582290  T
Q  173 ataaataa 180  Q
    ||||||||    
T  15582289 ataaataa 15582282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 34300121 - 34299994
Alignment:
Q  53 ttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagta 152  Q
    |||||||||  ||||||  | ||||||  |||| ||||||| |||| |||||||| ||| |||||| ||||||| ||||||| |||| ||||| | ||||    
T  34300121 ttgtgtatggtttttaaagagatgatttgttgttttgatttgaatgataaaattagtattatttactaaaatatccttattaattgtggttagtgaagta 34300022  T
Q  153 gataagtttgataaaattcaataaataa 180  Q
    | |||||| |||   |||||||||||||    
T  34300021 gttaagttggatggtattcaataaataa 34299994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 25417966 - 25418044
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgtta 144  Q
    |||||||||||||||  |   |||||||||||| |||||||||||| |||||  |||||||| |||||| | |||||||    
T  25417966 ttaagaaaatgattaggtagattgatttcaatgttaaaattaatattatttagtaaaatatttttattaatcgttgtta 25418044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 6834370 - 6834427
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||||| |||| ||||||||||||  || || ||||||||||||||||| ||||    
T  6834370 ttaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaa 6834427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 14637883 - 14637831
Alignment:
Q  290 tttttctaatgaaggaaatccagcaaaagcgactttaaaaatatgatgtgaaa 342  Q
    ||||| ||| |||||||||||| |||||  ||||||||||||| |||||||||    
T  14637883 tttttgtaaagaaggaaatccaacaaaaatgactttaaaaataagatgtgaaa 14637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 105817 - 105670
Alignment:
Q  46 ttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttag 145  Q
    ||||||||| || |||| | ||||| ||||||||| ||||||| ||||||||||||||||||||| | ||||| |||| |  ||||||| |||| |||||    
T  105817 ttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaattaatagcgtttactaaaacacccttattaattgtagttag 105718  T
Q  146 cggagtagataagtttgataaaattcaataaataaatgtataataatg 193  Q
     | ||||| ||||||  || |||||| ||||||||  |||||||||||    
T  105717 tgaagtagttaagttgaatgaaattcgataaataagggtataataatg 105670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 135997 - 136163
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||||| ||||||||| || | || | ||||  ||||||||| |  |||||||||||||||||||||||||| ||||||| ||||    
T  135997 tccgtctcacaatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaattaatagcatttactaaaa 136096  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
     |  ||||||| || | ||||| | ||||| |||||||||| ||||| |||||||||  ||||||||    
T  136097 cacccttattaattatagttagtgaagtagttaagtttgatgaaattaaataaataatggtataata 136163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 2138 - 2011
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| || |||||| ||||||| ||||||||| ||||||||||||||||||| |||| || ||||||| |||| ||||| ||| ||  ||  || |||     
T  2138 ttaaggaagtgattaattgtgttaatttcaatgataaaattaatatcatttactaaaacatccttattaattgtagttagtggattaattacattcgatg 2039  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  2038 aaattcaataaataagggtataataatg 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 1817 - 1690
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||||||||||||| || |||||||||  |||||||||||| ||||||||||  ||| |  | ||||| |||| || || ||||||| |||||| |||     
T  1817 ttaagaaaatgattaattatgttgattttgatggtaaaattagtatcatttacttaaacacccgtattaattgtagtcagtggagtagttaagttggatt 1718  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    |||||||||||||||  |||||||||||    
T  1717 aaattcaataaataagggtataataatg 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 17175 - 17097
Alignment:
Q  39 tagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  17175 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 7983 - 8110
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgata 165  Q
    ||||| ||||||||| || |||||||||  |||||||||||||||| |||||| |||| |  ||||||| |||| ||||| ||||||  |||||| |||     
T  7983 ttaaggaaatgattaattttgttgatttggatggtaaaattaatattatttaccaaaacacccttattaattgtagttagtggagtaattaagttggatg 8082  T
Q  166 aaattcaataaataaatgtataataatg 193  Q
    || ||||||||||||  |||| ||||||    
T  8083 aagttcaataaataagggtattataatg 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 16253 - 16097
Alignment:
Q  24 tccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    ||||||||| |||  |||| | |||||||||||  | || | ||||| ||||||||| |||||||||||| |||| ||||||||||| ||||||| ||||    
T  16253 tccgtctcacaatattagtagtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaattaatagcatttactaaaa 16154  T
Q  124 tattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataa 180  Q
     |  ||||||| |||| ||||  | || || |||| | ||| |||||||||||||||    
T  16153 cacacttattaattgtagttaatgaagcagttaagatggatgaaattcaataaataa 16097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 33973 - 34145
Alignment:
Q  18 acttcttccgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcattta 117  Q
    ||||| ||||||||| |||  |||||  ||||| |||||| | || | ||||| ||||||||| |||| |||| |||||| ||||||||| |  ||||||    
T  33973 acttcctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattta 34072  T
Q  118 caaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataaataaatgtataata 190  Q
    | |||| |  ||||||| |||| ||||| | | ||| |||||| ||| |||||||||||||||  ||||||||    
T  34073 ctaaaacacccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataata 34145  T

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Target: scaffold0182 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 20361 - 20480
Alignment:
Q  72 aaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattc 171  Q
    ||||||||| ||||||||||||  || ||||||||| |||||||||  ||||||  ||||||| |||  ||||| | ||||| |||||| ||| ||||||    
T  20361 aaatgattaattgtgttgattttgattgtaaaattagtatcatttagtaaaatacccttattaattgcagttagtgaagtagttaagttggatgaaattc 20460  T
Q  172 aataaataaatgtataataa 191  Q
    ||||||| |  |||||||||    
T  20461 aataaatgagggtataataa 20480  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 14170 - 14294
Alignment:
Q  64 ttttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttga 163  Q
    |||||| ||||||||||  ||||||||||| ||| ||||||||| ||||||||  | || | || |||||| || | ||||  ||||||| ||| |||||    
T  14170 ttttaataaaatgattaaatgtgttgattttaatcgtaaaattagtatcattt--ataattttttttattaattatagttaatggagtagttaaatttga 14267  T
Q  164 taaaattcaataaataaatgtataata 190  Q
    | |||||||||||||||| ||||||||    
T  14268 tgaaattcaataaataaaggtataata 14294  T

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Target: scaffold1809 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 697 - 810
Alignment:
Q  77 attatttgtgttgatttcaatggtaaaattaatatcatttacaaaaatattcttattacttgttgttagcggagtagataagtttgataaaattcaataa 176  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||| |   |||||  |||| ||||| |||||   ||| || ||| |||||||||||    
T  697 attaattgtgttgatttcaatggtaaaattaatagcatttactaaaacacctttattgattgtagttagtggagtgtttaaattggatgaaattcaataa 796  T
Q  177 ataaatgtataata 190  Q
    ||||  ||||||||    
T  797 ataagggtataata 810  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 252491 - 252572
Alignment:
Q  26 cgtctcaaaatgatagtcgcttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    |||||| |||| ||||||| ||||| |||| |||||| | ||||  ||||||||| || ||||||||| |||||||||||||    
T  252491 cgtctctaaattatagtcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaatta 252572  T

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Target: scaffold1391 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 1819 - 1876
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaattaatatcatttacaaaaa 123  Q
    |||||||||| |||| ||||||||||||  || || ||||||||||||||||| ||||    
T  1819 ttaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaa 1876  T

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Target: scaffold0470 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 1098 - 1057
Alignment:
Q  66 ttaagaaaatgattatttgtgttgatttcaatggtaaaatta 107  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  1098 ttaaaaaaatgattaattatgttgatttcaatggtaaaatta 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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