View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3546_low_69 (Length: 242)

Name: NF3546_low_69
Description: NF3546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3546_low_69
NF3546_low_69
[»] chr6 (34 HSPs)
chr6 (1-191)||(22605173-22605354)
chr6 (56-169)||(21118852-21118966)
chr6 (32-128)||(9362826-9362922)
chr6 (1-121)||(22604999-22605119)
chr6 (1-60)||(21130097-21130156)
chr6 (10-54)||(2377822-2377866)
chr6 (12-54)||(3058296-3058338)
chr6 (10-56)||(35210272-35210318)
chr6 (13-54)||(16107749-16107790)
chr6 (10-54)||(2378194-2378238)
chr6 (10-54)||(2578489-2578533)
chr6 (10-54)||(2579918-2579962)
chr6 (10-54)||(3409327-3409371)
chr6 (10-54)||(3415526-3415570)
chr6 (10-54)||(10074037-10074081)
chr6 (10-54)||(10074409-10074453)
chr6 (10-54)||(29518571-29518615)
chr6 (10-54)||(29518988-29519032)
chr6 (10-54)||(32741247-32741291)
chr6 (26-115)||(16738237-16738327)
chr6 (11-52)||(2843624-2843665)
chr6 (10-51)||(16454975-16455016)
chr6 (13-50)||(32460630-32460667)
chr6 (10-54)||(1846816-1846860)
chr6 (13-51)||(1127431-1127469)
chr6 (12-54)||(2578881-2578923)
chr6 (12-54)||(12092528-12092570)
chr6 (10-52)||(14748386-14748428)
chr6 (13-54)||(8481997-8482038)
chr6 (10-51)||(16454643-16454684)
chr6 (11-43)||(2579549-2579581)
chr6 (10-54)||(3409728-3409772)
chr6 (10-54)||(11637767-11637811)
chr6 (24-154)||(22612182-22612314)
[»] chr7 (39 HSPs)
chr7 (1-191)||(8802263-8802454)
chr7 (1-123)||(8802559-8802681)
chr7 (1-121)||(48071445-48071566)
chr7 (9-98)||(27391771-27391860)
chr7 (8-56)||(1085292-1085340)
chr7 (10-54)||(7517648-7517692)
chr7 (8-54)||(30253558-30253604)
chr7 (10-51)||(1085665-1085706)
chr7 (10-51)||(22566711-22566752)
chr7 (13-54)||(30244341-30244382)
chr7 (10-54)||(23423-23467)
chr7 (10-54)||(6054628-6054672)
chr7 (10-54)||(21416187-21416231)
chr7 (10-54)||(29157633-29157677)
chr7 (10-54)||(30245145-30245189)
chr7 (10-54)||(37533410-37533454)
chr7 (11-54)||(14681579-14681622)
chr7 (11-50)||(23569052-23569091)
chr7 (12-54)||(7554095-7554137)
chr7 (10-56)||(36939777-36939823)
chr7 (13-54)||(19122802-19122843)
chr7 (13-54)||(34218080-34218121)
chr7 (13-54)||(45754786-45754827)
chr7 (10-54)||(11845259-11845303)
chr7 (10-54)||(16569264-16569308)
chr7 (10-54)||(16596354-16596398)
chr7 (10-54)||(21619091-21619135)
chr7 (10-54)||(22567085-22567129)
chr7 (11-51)||(28300302-28300342)
chr7 (12-54)||(9901713-9901755)
chr7 (139-195)||(23578196-23578254)
chr7 (8-54)||(45433307-45433353)
chr7 (10-51)||(24177503-24177544)
chr7 (67-108)||(24903027-24903068)
chr7 (10-43)||(37533067-37533100)
chr7 (10-51)||(40094823-40094864)
chr7 (73-121)||(7631216-7631264)
chr7 (10-54)||(8128487-8128531)
chr7 (10-54)||(47129163-47129207)
[»] chr5 (38 HSPs)
chr5 (1-131)||(41340338-41340467)
chr5 (1-121)||(41341514-41341634)
chr5 (24-117)||(5963765-5963858)
chr5 (8-121)||(34103620-34103733)
chr5 (118-191)||(41341343-41341417)
chr5 (72-132)||(14169045-14169105)
chr5 (117-191)||(14168820-14168895)
chr5 (10-56)||(41170702-41170748)
chr5 (10-54)||(26074680-26074724)
chr5 (10-51)||(18603169-18603210)
chr5 (10-54)||(9498700-9498744)
chr5 (10-54)||(13042607-13042651)
chr5 (10-54)||(26074192-26074236)
chr5 (10-50)||(32487461-32487501)
chr5 (10-54)||(40296361-40296405)
chr5 (15-54)||(6500523-6500562)
chr5 (10-43)||(26075219-26075252)
chr5 (10-51)||(34753074-34753115)
chr5 (10-54)||(624264-624308)
chr5 (10-54)||(3295061-3295105)
chr5 (10-54)||(6500890-6500934)
chr5 (22-54)||(13042784-13042816)
chr5 (10-54)||(13112605-13112649)
chr5 (22-54)||(13112782-13112814)
chr5 (10-54)||(25328003-25328047)
chr5 (10-50)||(36521946-36521986)
chr5 (8-51)||(24489255-24489298)
chr5 (12-50)||(11417027-11417065)
chr5 (10-51)||(13415809-13415850)
chr5 (10-51)||(15370470-15370511)
chr5 (10-51)||(36568616-36568657)
chr5 (13-54)||(42405642-42405683)
chr5 (9-53)||(12662699-12662743)
chr5 (1-45)||(14168993-14169037)
chr5 (10-54)||(15370167-15370211)
chr5 (10-54)||(35150074-35150118)
chr5 (14-54)||(36522283-36522323)
chr5 (10-54)||(41632850-41632894)
[»] chr3 (49 HSPs)
chr3 (6-157)||(16869739-16869891)
chr3 (79-191)||(17732101-17732213)
chr3 (79-191)||(19033332-19033444)
chr3 (6-129)||(17731875-17731998)
chr3 (6-129)||(19033106-19033229)
chr3 (25-191)||(40196017-40196186)
chr3 (1-130)||(16870925-16871058)
chr3 (1-68)||(17735023-17735090)
chr3 (1-68)||(19036292-19036359)
chr3 (10-56)||(22303703-22303749)
chr3 (10-51)||(41359814-41359855)
chr3 (1-54)||(54017594-54017647)
chr3 (7-89)||(16868394-16868476)
chr3 (8-54)||(43346837-43346883)
chr3 (24-121)||(53981609-53981707)
chr3 (10-54)||(12114608-12114652)
chr3 (10-54)||(22304001-22304045)
chr3 (10-54)||(22304637-22304681)
chr3 (24-108)||(23161986-23162070)
chr3 (10-54)||(39389138-39389182)
chr3 (10-50)||(52634743-52634783)
chr3 (8-51)||(29644630-29644673)
chr3 (10-45)||(32589771-32589806)
chr3 (75-121)||(23162322-23162368)
chr3 (10-51)||(29644951-29644992)
chr3 (13-54)||(32462946-32462987)
chr3 (13-54)||(37990685-37990726)
chr3 (10-51)||(47964567-47964608)
chr3 (10-54)||(4823723-4823767)
chr3 (10-54)||(35946590-35946634)
chr3 (12-56)||(46546369-46546413)
chr3 (10-54)||(53596028-53596072)
chr3 (10-54)||(53596343-53596387)
chr3 (10-45)||(1634369-1634404)
chr3 (11-54)||(3135500-3135543)
chr3 (8-54)||(3135119-3135165)
chr3 (8-54)||(8327970-8328016)
chr3 (13-51)||(42342139-42342177)
chr3 (12-54)||(45395699-45395741)
chr3 (10-52)||(52635008-52635050)
chr3 (10-51)||(33803301-33803342)
chr3 (21-54)||(39336016-39336049)
chr3 (10-54)||(15772922-15772966)
chr3 (18-54)||(31190085-31190121)
chr3 (14-54)||(37991023-37991063)
chr3 (10-50)||(42342438-42342478)
chr3 (10-54)||(48127861-48127905)
chr3 (10-54)||(53596543-53596587)
chr3 (10-54)||(54018244-54018288)
[»] chr1 (27 HSPs)
chr1 (23-123)||(25293562-25293662)
chr1 (10-54)||(17294645-17294689)
chr1 (10-54)||(26661568-26661612)
chr1 (10-54)||(26661944-26661988)
chr1 (10-54)||(34364993-34365037)
chr1 (10-54)||(44290504-44290548)
chr1 (13-51)||(3875380-3875418)
chr1 (12-54)||(37556181-37556223)
chr1 (12-54)||(41759553-41759595)
chr1 (13-54)||(3550791-3550832)
chr1 (10-51)||(32168747-32168788)
chr1 (10-43)||(44290882-44290915)
chr1 (10-54)||(14318935-14318979)
chr1 (31-94)||(27686529-27686593)
chr1 (10-54)||(32594762-32594806)
chr1 (10-54)||(41157059-41157103)
chr1 (10-54)||(41157443-41157487)
chr1 (10-54)||(44043818-44043862)
chr1 (12-54)||(45494020-45494062)
chr1 (10-51)||(66136-66177)
chr1 (14-51)||(3537648-3537685)
chr1 (13-54)||(11977015-11977056)
chr1 (13-54)||(29798270-29798311)
chr1 (8-45)||(30630693-30630730)
chr1 (8-45)||(34649504-34649541)
chr1 (10-43)||(41142440-41142473)
chr1 (10-54)||(5320011-5320055)
[»] chr8 (34 HSPs)
chr8 (1-191)||(5981639-5981832)
chr8 (8-67)||(12156691-12156750)
chr8 (11-54)||(30441154-30441197)
chr8 (9-54)||(147887-147932)
chr8 (10-51)||(3038339-3038380)
chr8 (10-54)||(5915935-5915979)
chr8 (10-54)||(9483233-9483277)
chr8 (10-54)||(30359339-30359383)
chr8 (19-54)||(20995462-20995497)
chr8 (24-121)||(5981420-5981518)
chr8 (8-54)||(6651560-6651606)
chr8 (24-104)||(2954503-2954584)
chr8 (13-54)||(3669758-3669799)
chr8 (13-54)||(34834947-34834988)
chr8 (10-51)||(40518139-40518180)
chr8 (10-54)||(3670128-3670172)
chr8 (10-54)||(18371707-18371750)
chr8 (12-56)||(18372038-18372082)
chr8 (10-54)||(33113413-33113457)
chr8 (10-54)||(34835277-34835321)
chr8 (10-54)||(34835543-34835587)
chr8 (10-54)||(34835809-34835853)
chr8 (14-45)||(32640587-32640618)
chr8 (8-54)||(6731961-6732007)
chr8 (13-51)||(9507853-9507891)
chr8 (8-54)||(45122103-45122149)
chr8 (10-51)||(147519-147560)
chr8 (68-177)||(3671062-3671173)
chr8 (10-50)||(70324-70364)
chr8 (10-50)||(8918814-8918854)
chr8 (10-54)||(20870619-20870663)
chr8 (10-54)||(37544536-37544580)
chr8 (10-50)||(40518650-40518690)
chr8 (10-54)||(43274825-43274869)
[»] chr4 (47 HSPs)
chr4 (1-95)||(1868110-1868204)
chr4 (24-191)||(47680703-47680874)
chr4 (10-54)||(49302974-49303018)
chr4 (10-54)||(50630799-50630843)
chr4 (10-54)||(54936264-54936308)
chr4 (10-56)||(1731689-1731735)
chr4 (12-54)||(25483406-25483448)
chr4 (11-56)||(44620422-44620467)
chr4 (10-54)||(3340875-3340919)
chr4 (10-54)||(11197294-11197338)
chr4 (10-54)||(18932793-18932837)
chr4 (10-54)||(22028005-22028049)
chr4 (10-54)||(36629305-36629349)
chr4 (10-54)||(55933168-55933212)
chr4 (12-54)||(52884957-52885000)
chr4 (8-50)||(3271853-3271895)
chr4 (13-51)||(4955364-4955402)
chr4 (10-51)||(22183311-22183352)
chr4 (13-54)||(23817725-23817766)
chr4 (10-51)||(31691220-31691261)
chr4 (13-54)||(34646693-34646734)
chr4 (10-54)||(39404466-39404510)
chr4 (10-54)||(41370425-41370469)
chr4 (10-54)||(49880228-49880272)
chr4 (10-54)||(50002494-50002538)
chr4 (13-57)||(51681609-51681653)
chr4 (10-50)||(54017643-54017683)
chr4 (10-54)||(54108981-54109024)
chr4 (15-54)||(39792904-39792943)
chr4 (13-56)||(44621073-44621116)
chr4 (19-54)||(54343052-54343087)
chr4 (12-54)||(10245989-10246031)
chr4 (10-52)||(10396484-10396526)
chr4 (10-56)||(20825904-20825950)
chr4 (12-54)||(36608705-36608747)
chr4 (8-54)||(49076875-49076921)
chr4 (10-51)||(2741139-2741180)
chr4 (13-50)||(15841416-15841453)
chr4 (13-50)||(32941171-32941208)
chr4 (14-54)||(52884767-52884808)
chr4 (10-50)||(3244499-3244539)
chr4 (118-177)||(8445748-8445808)
chr4 (10-54)||(10396199-10396243)
chr4 (10-54)||(22028413-22028457)
chr4 (10-54)||(36572087-36572131)
chr4 (8-40)||(45484785-45484817)
chr4 (14-54)||(45496877-45496917)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-93)||(197788-197878)
[»] scaffold0702 (1 HSPs)
scaffold0702 (10-54)||(560-604)
[»] chr2 (36 HSPs)
chr2 (10-54)||(36178651-36178695)
chr2 (8-56)||(37895105-37895153)
chr2 (6-53)||(36178218-36178265)
chr2 (10-56)||(37106256-37106302)
chr2 (10-51)||(14745343-14745384)
chr2 (10-51)||(14745716-14745757)
chr2 (10-51)||(15880331-15880372)
chr2 (10-54)||(6421799-6421843)
chr2 (10-54)||(28254283-28254327)
chr2 (10-51)||(29874072-29874113)
chr2 (12-45)||(35580779-35580812)
chr2 (10-50)||(962666-962706)
chr2 (14-54)||(3672773-3672813)
chr2 (10-54)||(5542671-5542715)
chr2 (10-54)||(6422178-6422222)
chr2 (10-54)||(7598296-7598340)
chr2 (10-54)||(15511541-15511585)
chr2 (10-50)||(31468800-31468840)
chr2 (10-54)||(37105992-37106036)
chr2 (10-45)||(35580495-35580530)
chr2 (8-51)||(40679678-40679721)
chr2 (12-54)||(5543044-5543086)
chr2 (11-53)||(28531361-28531403)
chr2 (10-40)||(31385805-31385835)
chr2 (12-54)||(33731718-33731760)
chr2 (67-191)||(40053288-40053414)
chr2 (13-54)||(6421456-6421497)
chr2 (14-51)||(30323536-30323573)
chr2 (10-43)||(36005937-36005970)
chr2 (10-51)||(41283524-41283565)
chr2 (10-51)||(42514717-42514758)
chr2 (10-54)||(6421694-6421738)
chr2 (10-54)||(29676976-29677020)
chr2 (10-50)||(33561501-33561541)
chr2 (13-45)||(36178324-36178356)
chr2 (10-54)||(37632643-37632687)
[»] scaffold0391 (2 HSPs)
scaffold0391 (10-54)||(1737-1781)
scaffold0391 (13-54)||(1152-1193)
[»] scaffold0027 (1 HSPs)
scaffold0027 (12-54)||(47430-47472)
[»] scaffold0078 (2 HSPs)
scaffold0078 (10-54)||(5050-5094)
scaffold0078 (10-54)||(5425-5469)


Alignment Details
Target: chr6 (Bit Score: 139; Significance: 7e-73; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 22605354 - 22605173
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22605354 agagtggaaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctcttatggtcttggacgtttggcccattgccgctcccgg 22605255  T
Q  101 ggctccccggactccccaacagtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgtgatcaggctagtgat 191  Q
    ||||         |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22605254 ggct---------ccccaacaatggtatcaaagccgtggttaggctcagtggggagcgggagcgggatcctagtgtgatcaggctagtgat 22605173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 21118966 - 21118852
Alignment:
Q  56 taagtctgttatggtcttggacgtttggcccattgccgctcccg-gggctccccggactccccaacagtggtatcaaagtcgtggttaggcttagtgggg 154  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||  |||||||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  21118966 taagtctcttatagtcctggacgtctggcccattgccgctccccagggctccccgaagtccccaacagtggtatcagagtcgtggttaggcttagtgggg 21118867  T
Q  155 agcgggagcgggatc 169  Q
    |||||||||||||||    
T  21118866 agcgggagcgggatc 21118852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 9362922 - 9362826
Alignment:
Q  32 ggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctccccggactccccaacagtggtat 128  Q
    |||||||||||| | | |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  9362922 ggttttgggtaatagtatggtgtttaagtctcttatggtcctggacgtttgtcccattgccgctcccggggctccctggactccccaacggtggtat 9362826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22605119 - 22604999
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    |||| ||||| |||||||||||||  |||||| |||||| ||||| || ||||||||| ||| |||||||||||||| ||||||||||||||||| | ||    
T  22605119 agagagggaatccataaacccattttcttaagcttttggataagagtgaggtgtttaactctcttatggtcttggacatttggcccattgccgcttctgg 22605020  T
Q  101 ggctccccggactccccaaca 121  Q
    |||||||||| ||||||||||    
T  22605019 ggctccccgggctccccaaca 22604999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21130156 - 21130097
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagt 60  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  21130156 agagagggaacccataaatccattgccttaaggttttggataagagtgtggtgtttaagt 21130097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 2377822 - 2377866
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  2377822 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 2377866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 3058296 - 3058338
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  3058296 ccataaacccattgccttaaggttttgggtaagagtgtggtgt 3058338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 35210272 - 35210318
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  35210272 acccataaaaccattgccttaaggttttgggtaagagtgtggtgttt 35210318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 16107749 - 16107790
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  16107749 cataaacccattgccttaaggttttgggtaagagtgtggtgt 16107790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 2378194 - 2378238
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  2378194 acccataaacccattaccttaaggttttaggtaagaatgtggtgt 2378238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 2578533 - 2578489
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||    
T  2578533 acccataaacccatagccttaaggttttgggtaagagtgtggtgt 2578489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 2579962 - 2579918
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  2579962 acccataaacccacagccttaaggttttgggtaagaatgtggtgt 2579918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 3409327 - 3409371
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  3409327 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 3409371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 3415526 - 3415570
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  3415526 acccataaacccattgccttaaggtttttggtaagagtgtggtgt 3415570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 10074081 - 10074037
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||| | ||||||||    
T  10074081 acccataaacccattgccttaaggttttgggtaaaagtgtggtgt 10074037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 10074453 - 10074409
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  10074453 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 10074409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 29518571 - 29518615
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  29518571 acccataaacccattaccttaaggttttgggtaagagtgtggtgt 29518615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 29518988 - 29519032
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  29518988 acccataaacccattaccttaaggttttgggtaagagtgtggtgt 29519032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 32741247 - 32741291
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  32741247 acccataaacccattaccttaaggttttgggtaagagtgtggtgt 32741291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 16738237 - 16738327
Alignment:
Q  26 ccttaaggttttgggtaagaatgtggtgtttaagtctgtta-tggtcttggacgtttggcccattgccgctcccggggctccccggactcc 115  Q
    ||||||| ||||||||  ||||||||| | ||||||| ||  ||||||||||||||| |  ||||||||||||||| |||| |||||||||    
T  16738237 ccttaagattttgggtgggaatgtggtttctaagtctcttggtggtcttggacgtttagttcattgccgctcccggcgctctccggactcc 16738327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 2843624 - 2843665
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtggt 52  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  2843624 cccataaactcattgccttaaggttttgggtaagagtgtggt 2843665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 16454975 - 16455016
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  16454975 acccataaacctattgccttaaggttttgggtaagagtgtgg 16455016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 32460667 - 32460630
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  32460667 cataaacccattgccttaaggttttgggtaagagtgtg 32460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1846816 - 1846860
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||    
T  1846816 acccataaatccattgccttaaggttttggataagagtgtggtgt 1846860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 1127431 - 1127469
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  1127431 cataaacccattaccttaaggttttgggtaagagtgtgg 1127469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 2578923 - 2578881
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||| |||| |||||||||||||||||||| ||||||||    
T  2578923 ccataaactcattaccttaaggttttgggtaagagtgtggtgt 2578881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 12092570 - 12092528
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||| |||||||||||||||||| |||||| ||||||||    
T  12092570 ccataaactcattgccttaaggttttgagtaagactgtggtgt 12092528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 14748428 - 14748386
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggt 52  Q
    |||||||||| |||||| |||||||||||||||||| ||||||    
T  14748428 acccataaactcattgcgttaaggttttgggtaagagtgtggt 14748386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 8481997 - 8482038
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| |||||||||||| |||||||||||| ||||||||    
T  8481997 cataaactcattgccttaagattttgggtaagagtgtggtgt 8482038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 16454643 - 16454684
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||||||||||||| |||||| ||||| |||||    
T  16454643 acccataaacccattgccttaagattttggataagagtgtgg 16454684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 2579581 - 2579549
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaa 43  Q
    ||||||||| |||||||||||||||||||||||    
T  2579581 cccataaactcattgccttaaggttttgggtaa 2579549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 3409728 - 3409772
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||| |  |||||||||||| ||||||||    
T  3409728 acccataaacccattgcctttattttttgggtaagagtgtggtgt 3409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11637811 - 11637767
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| |||||| |||||| ||||| ||||||||    
T  11637811 acccataaacccattgtcttaagattttggataagagtgtggtgt 11637767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 22612314 - 22612182
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgttatgg-tcttggacgtttggcccattgccgctcccggggctccccggactccccaac-a 121  Q
    ||||||||||||||||||    ||||||||| ||||||| ||| || |||||||||||| ||||||||  | |||||| ||| |||  |||| ||||| |    
T  22612314 tgccttaaggttttgggtgtagatgtggtgtctaagtctcttagggttcttggacgtttagcccattgttgatcccggcgcttcccatactcgccaacaa 22612215  T
Q  122 gtggtatcaaagtcgtggttaggcttagtgggg 154  Q
     |||||| | || | |||||||||| |||||||    
T  22612214 ctggtataagagccctggttaggctcagtgggg 22612182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 8802263 - 8802454
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    |||| |||||||||||||| ||||| ||| | |||||| ||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||  ||    
T  8802263 agagagggaacccataaactcattgtctttatgttttgagtaagagcgtggtgtttaagtctcttatggtcttggacgtttggcccattgccgctcttgg 8802362  T
Q  101 ggctccccggactccccaacagtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgt-gatcaggctagtgat 191  Q
    | ||| |||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  8802363 gactctccggactccccaacagtggtatcagagccatggttaggctcagtggggagcgggagcgggatcctagtatggatcaggctagtgat 8802454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8802559 - 8802681
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    |||| |||||||||||||| || ||  ||||| |||||||||||| |||||||||||||||| |||||||| ||||| |||| ||||||||||||| |||    
T  8802559 agagggggaacccataaactcactgttttaagattttgggtaagagtgtggtgtttaagtctcttatggtcatggacatttgacccattgccgctcgcgg 8802658  T
Q  101 ggctccccggactccccaacagt 123  Q
    ||| || ||||||||||||||||    
T  8802659 ggcaccgcggactccccaacagt 8802681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 48071445 - 48071566
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    |||| |||||| |||||||| |||| ||||||||||||| ||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  48071445 agagagggaactcataaacctattgtcttaaggttttggataagagtgtgatgtttaagtctcttatgatcttggacgtttggcccattgccgcttccgg 48071544  T
Q  101 ggctccccgga-ctccccaaca 121  Q
    | ||| ||||| ||||||||||    
T  48071545 gactcgccggacctccccaaca 48071566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 27391860 - 27391771
Alignment:
Q  9 aacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctccc 98  Q
    |||||||||| ||| |||||||||||||| ||||||| |||||||||||||||| |||| |||||| ||||||||| |||||||||||||    
T  27391860 aacccataaatccactgccttaaggttttaggtaagagtgtggtgtttaagtctcttatagtcttgaacgtttggctcattgccgctccc 27391771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 1085340 - 1085292
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  1085340 gaacccataaactcattgccttaaggttttgggtaagagtgtggtgttt 1085292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 7517648 - 7517692
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  7517648 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 7517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30253558 - 30253604
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  30253558 gaacccataaactcattgccttaaggttttgggtaagagtgtggtgt 30253604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 1085706 - 1085665
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  1085706 acccataaacccattgccttaaggttttgggtaagagtgtgg 1085665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 22566752 - 22566711
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  22566752 acccataaacccattgccttaaggttttgggtaagagtgtgg 22566711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 30244341 - 30244382
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  30244341 cataaacccattgccttaaggttttgggtaagagtgtggtgt 30244382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 23467 - 23423
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||    
T  23467 acccataaacctattgccttaaggttttgggtaagagtgtggtgt 23423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6054628 - 6054672
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  6054628 acccataaacacattgccttaaggttttgggtaagagtgtggtgt 6054672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 21416231 - 21416187
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  21416231 acccataaacccattgccttagggttttgggtaagagtgtggtgt 21416187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 29157633 - 29157677
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  29157633 acccataaatccattgccttaaggttttgggtaagagtgtggtgt 29157677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 30245145 - 30245189
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  30245145 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 30245189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37533454 - 37533410
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  37533454 acccataaatccattgccttaaggttttgggtaagagtgtggtgt 37533410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 14681579 - 14681622
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  14681579 cccataaacccattgtcttaaggttttgggtaagagtgtggtgt 14681622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 23569091 - 23569052
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  23569091 cccataaacccattgccttaaggttttgggtaagagtgtg 23569052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 7554095 - 7554137
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  7554095 ccataaacccatagccttaaggttttgggtaagagtgtggtgt 7554137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 36939823 - 36939777
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||||    
T  36939823 acccataaatccattgccttaaggttttgggtaaaagtgtggtgttt 36939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19122802 - 19122843
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  19122802 cataaatccattgccttaaggttttgggtaagagtgtggtgt 19122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 34218121 - 34218080
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  34218121 cataaacccattgtcttaaggttttgggtaagagtgtggtgt 34218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 45754786 - 45754827
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  45754786 cataaacccatagccttaaggttttgggtaagagtgtggtgt 45754827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 11845259 - 11845303
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||    
T  11845259 acccataaatccattgccttaaggttttggataagagtgtggtgt 11845303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 16569264 - 16569308
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||| ||||||| || |||||    
T  16569264 acccataaacccattgccttaaggtttttggtaagagtgcggtgt 16569308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16596398 - 16596354
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||| ||||||| || |||||    
T  16596398 acccataaacccattgccttaaggtttttggtaagagtgcggtgt 16596354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 21619135 - 21619091
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||    
T  21619135 acccataaacccattgtcttaaggttttgggtaaaagtgtggtgt 21619091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22567129 - 22567085
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||    
T  22567129 acccataaactcattgccttaaggtttttggtaagagtgtggtgt 22567085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 28300342 - 28300302
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  28300342 cccataaacccattgccttaagattttgggtaagagtgtgg 28300302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 9901713 - 9901755
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||    
T  9901713 ccataaactcattgtcttaaggttttgggtaagagtgtggtgt 9901755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 23578254 - 23578196
Alignment:
Q  139 gttaggcttagtgggg-agcgggagcgggatcctagtgtga-tcaggctagtgatatgg 195  Q
    |||||||| ||||||| || |||||||||||||||| |||| |||||||||||||||||    
T  23578254 gttaggctcagtggggtagtgggagcgggatcctagcgtgaatcaggctagtgatatgg 23578196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 45433307 - 45433353
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||| |||||||| ||||||||||| |||||||||||| ||||||||    
T  45433307 gaactcataaacctattgccttaagattttgggtaagagtgtggtgt 45433353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 24177503 - 24177544
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||| ||||| ||||||| |||||    
T  24177503 acccataaacccattgccttaaagtttttggtaagagtgtgg 24177544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 24903027 - 24903068
Alignment:
Q  67 tggtcttggacgtttggcccattgccgctcccggggctcccc 108  Q
    ||||||||||||||| || ||||||||||||||| |||||||    
T  24903027 tggtcttggacgtttagcgcattgccgctcccggagctcccc 24903068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 37533100 - 37533067
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaa 43  Q
    |||||||||| |||||||||||||||||||||||    
T  37533100 acccataaactcattgccttaaggttttgggtaa 37533067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 40094864 - 40094823
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||| | ||||||||||||||||||| |||||    
T  40094864 acccataaacccatcgtcttaaggttttgggtaagagtgtgg 40094823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 7631264 - 7631216
Alignment:
Q  73 tggacgtttggcccattgccgctcccggggctccccggactccccaaca 121  Q
    |||||||||||| ||||||||||||||  |||| | |||||||||||||    
T  7631264 tggacgtttggcacattgccgctcccgacgctctctggactccccaaca 7631216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 8128531 - 8128487
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||  |||||||||||||| ||||| ||||||||    
T  8128531 acccataaacccataaccttaaggttttggttaagagtgtggtgt 8128487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 47129163 - 47129207
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| || ||||||||||||||| || ||||||||    
T  47129163 acccataaacccatcgctttaaggttttgggtaggagtgtggtgt 47129207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 41340338 - 41340467
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    |||| |||||| |||| || |||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||     
T  41340338 agagagggaactcatacactcattgccttaagattttggataagagtgtggtgtttaagtctcttatggtcttggacgttt-gcccattgccgctcccga 41340436  T
Q  101 ggctccccggactccccaacagtggtatcaa 131  Q
    |||||||||||||||||||||||||||||||    
T  41340437 ggctccccggactccccaacagtggtatcaa 41340467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 41341514 - 41341634
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccgg 100  Q
    |||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||    
T  41341514 agagagggaacccatacactcattgccttaaggtttttggtaagaatgtggtgtttaagtctcttatagtcctggacgtttggcccattgccgctcctgg 41341613  T
Q  101 ggctccccggactccccaaca 121  Q
    ||||||||| |||||||||||    
T  41341614 ggctccccgtactccccaaca 41341634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 5963765 - 5963858
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctccccggactcccc 117  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5963765 tgccttaaggttttgggtaagagtgtggtgtttaagtctcttatggtcctggacgtttgacccattgccgctcccggggctccccggactcccc 5963858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 34103620 - 34103733
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctccc 107  Q
    |||| ||||||| ||||||||||||||||||  ||||| |||||||||||| ||| |||||| | | |||||||| |||||||||||||||||||||| |    
T  34103620 gaactcataaactcattgccttaaggttttgaataagagtgtggtgtttaaatctcttatggacctagacgtttgacccattgccgctcccggggctctc 34103719  T
Q  108 cggactccccaaca 121  Q
    ||||||||||||||    
T  34103720 cggactccccaaca 34103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 41341343 - 41341417
Alignment:
Q  118 aacagtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgt-gatcaggctagtgat 191  Q
    ||||||||||| | || |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  41341343 aacagtggtattagagccgtggttaggctcagtggggagcgagagcgggatcctagtgtggatcaggctagtgat 41341417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 14169045 - 14169105
Alignment:
Q  72 ttggacgtttggcccattgccgctcccggggctccccggactccccaacagtggtatcaaa 132  Q
    ||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14169045 ttggaagtttgtcccattgccgctcctggggctccccggattccccaacagtggtatcaaa 14169105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 14168820 - 14168895
Alignment:
Q  117 caacagtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgt-gatcaggctagtgat 191  Q
    |||||||||||||| || ||||||||||||||||||||||||||| | |||| ||||||| ||||| |||||||||    
T  14168820 caacagtggtatcagagccgtggttaggcttagtggggagcgggaacaggattctagtgtggatcatgctagtgat 14168895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 41170702 - 41170748
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41170702 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 41170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 26074680 - 26074724
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  26074680 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 26074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 18603210 - 18603169
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  18603210 acccataaacccattgccttaaggttttgggtaagagtgtgg 18603169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9498744 - 9498700
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  9498744 acccataaacccattgccttaagattttgggtaagagtgtggtgt 9498700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13042607 - 13042651
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  13042607 acccataaacccattgccttaaggttttggataagagtgtggtgt 13042651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 26074236 - 26074192
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  26074236 acccatgaacccattgccttaaggttttgggtaagagtgtggtgt 26074192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 32487461 - 32487501
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  32487461 acccataaacccattgccttaaggttttgggtaagagtgtg 32487501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 40296405 - 40296361
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  40296405 acccataaacccattgccttgaggttttgggtaagagtgtggtgt 40296361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 6500523 - 6500562
Alignment:
Q  15 taaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  6500523 taaacccattgccttaaggttttgggtaagagtgtggtgt 6500562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 26075252 - 26075219
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaa 43  Q
    ||||||||||||||||||||||||||||||||||    
T  26075252 acccataaacccattgccttaaggttttgggtaa 26075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 34753115 - 34753074
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  34753115 acccataaaccgattgccttaaggttttgggtaagagtgtgg 34753074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 624264 - 624308
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||    
T  624264 acccataaacccatagccttgaggttttgggtaagagtgtggtgt 624308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 3295105 - 3295061
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  3295105 acccataaacccattgccttgaggttttgggtatgagtgtggtgt 3295061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6500890 - 6500934
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||    
T  6500890 acccataaactcattgccttaaggttttggataagagtgtggtgt 6500934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 13042784 - 13042816
Alignment:
Q  22 attgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||    
T  13042784 attgccttaaggttttgggtaagaatgtggtgt 13042816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13112605 - 13112649
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||    
T  13112605 acccataaacccattgtcttaaggttttggataagagtgtggtgt 13112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 13112782 - 13112814
Alignment:
Q  22 attgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||    
T  13112782 attgccttaaggttttgggtaagaatgtggtgt 13112814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 25328003 - 25328047
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||    
T  25328003 acccataaacctaatgccttaaggttttgggtaagagtgtggtgt 25328047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 36521986 - 36521946
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  36521986 acccataaaccaattgccttaaggttttgggtaagagtgtg 36521946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 24489298 - 24489255
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||    
T  24489298 gaacccataaacccattgccttaagattttgcgtaagagtgtgg 24489255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 11417065 - 11417027
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  11417065 ccataaacccattgccttaaggttttgtgtaagagtgtg 11417027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 13415850 - 13415809
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||| ||| |||||||||||||||||||| |||||    
T  13415850 acccataaacctattaccttaaggttttgggtaagagtgtgg 13415809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 15370470 - 15370511
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||| |||||||||||||| |||||| |||||    
T  15370470 acccataaacccatagccttaaggttttgcgtaagagtgtgg 15370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 36568657 - 36568616
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||| ||||||||||||||||||||||| ||||||| |||||    
T  36568657 acccgtaaacccattgccttaaggtttttggtaagagtgtgg 36568616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 42405683 - 42405642
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||| | |||||||||||||||||||||| ||||||||    
T  42405683 cataaacctaatgccttaaggttttgggtaagagtgtggtgt 42405642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 12662743 - 12662699
Alignment:
Q  9 aacccataaacccattgccttaaggttttgggtaagaatgtggtg 53  Q
    |||||||||| |||||| |||||| |||||||||||| |||||||    
T  12662743 aacccataaatccattgtcttaagtttttgggtaagagtgtggtg 12662699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14168993 - 14169037
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaaga 45  Q
    |||| |||||||||||| | ||||||||||| |||||||||||||    
T  14168993 agagagggaacccataagctcattgccttaaagttttgggtaaga 14169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 15370167 - 15370211
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||    
T  15370167 acccataaatccacagccttaaggttttgggtaagagtgtggtgt 15370211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 35150074 - 35150118
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||    
T  35150074 acccataaatccattgtcttaaggttttgggtaaaagtgtggtgt 35150118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 36522323 - 36522283
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||  ||||||||||||||||||| ||||||||    
T  36522323 ataaacccattatcttaaggttttgggtaagagtgtggtgt 36522283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 41632850 - 41632894
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||| ||| ||||| |||||||||||| ||||||||    
T  41632850 acccataaacccaatgctttaagattttgggtaagagtgtggtgt 41632894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 16869891 - 16869739
Alignment:
Q  6 gggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctc 105  Q
    |||||| ||||||| |||||||||||||||||| | |||| |||||||||||||||| ||| |||| ||||  ||| || ||||||||||||| | ||||    
T  16869891 gggaacacataaactcattgccttaaggttttgagcaagagtgtggtgtttaagtctcttaaggtcgtggatatttagcacattgccgctcccagcgctc 16869792  T
Q  106 cccggactc-cccaacagtggtatcaaagtcgtggttaggcttagtggggagc 157  Q
    ||||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  16869791 cccggactctccaaaaagtggtatcaaagtcgtggttaggctcggtggggagc 16869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 191
Target Start/End: Complemental strand, 17732213 - 17732101
Alignment:
Q  79 tttggcccattgccgctcccggggctccccggactccccaacagtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgtga 178  Q
    |||||||||||||| ||||  |||||||||  |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||  ||    
T  17732213 tttggcccattgccactcctagggctccccaaactccccaacagtggtatcagagccgtggttaggctcagtggggagcgggagcgggatcctagttgga 17732114  T
Q  179 tcaggctagtgat 191  Q
    |||||||||||||    
T  17732113 tcaggctagtgat 17732101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 191
Target Start/End: Complemental strand, 19033444 - 19033332
Alignment:
Q  79 tttggcccattgccgctcccggggctccccggactccccaacagtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgtga 178  Q
    |||||||||||||| ||||  |||||||||  |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||  ||    
T  19033444 tttggcccattgccactcctagggctccccaaactccccaacagtggtatcagagccgtggttaggctcagtggggagcgggagcgggatcctagttgga 19033345  T
Q  179 tcaggctagtgat 191  Q
    |||||||||||||    
T  19033344 tcaggctagtgat 19033332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 17731998 - 17731875
Alignment:
Q  6 gggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctc 105  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||  ||||||||||  ||||||| ||||||||||||||| ||||||    
T  17731998 gggaacccataaacccattgccttaaggttttgagtaagagtgtggtgttcaagtcacttatggtcttaaacgtttgacccattgccgctcccagggctc 17731899  T
Q  106 cccggactccccaacagtggtatc 129  Q
    |||  ||| | |||||||||||||    
T  17731898 cccaaacttcacaacagtggtatc 17731875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 19033229 - 19033106
Alignment:
Q  6 gggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctc 105  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||  ||||||||||  ||||||| ||||||||||||||| ||||||    
T  19033229 gggaacccataaacccattgccttaaggttttgagtaagagtgtggtgttcaagtcacttatggtcttaaacgtttgacccattgccgctcccagggctc 19033130  T
Q  106 cccggactccccaacagtggtatc 129  Q
    |||  ||| | |||||||||||||    
T  19033129 cccaaacttcacaacagtggtatc 19033106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 40196186 - 40196017
Alignment:
Q  25 gccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctccccggactccccaac-agt 123  Q
    |||||||||||||||||    || ||| || ||||||| |||||||||| || |||||||||||||||||||  |||||||||||| ||||||||| | |    
T  40196186 gccttaaggttttgggtggagatatggagtctaagtctcttatggtcttagatgtttggcccattgccgctcttggggctccccggtctccccaacaact 40196087  T
Q  124 ggtatcaaagtcgtggttaggcttagtgggg-agcgggagcgggatcctagtgt-gatcaggctagtgat 191  Q
    ||||||| ||   ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  40196086 ggtatcagagctctggttaggcttggtggggtagcgggagcgggatcctagtgtggatcaggctagtgat 40196017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 16871058 - 16870925
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtctt----ggacgtttggcccattgccgctc 96  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||| |||||||| |    | || |||||||||||||| |||    
T  16871058 agagagggaacccataaactcattgccttaaggttttaggtaagagtgtcgtgtttaagtctcttatggtcctgaaagaacatttggcccattgcccctc 16870959  T
Q  97 ccggggctccccggactccccaacagtggtatca 130  Q
     ||||| ||||| || | || |||||||||||||    
T  16870958 acggggttcccctgaatacctaacagtggtatca 16870925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17735090 - 17735023
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatg 68  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||| |||||    
T  17735090 agagagggaacccataaactcattgacttaaggttttgggtaagagtgcggtgtttaagtctcttatg 17735023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19036359 - 19036292
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatg 68  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||| |||||    
T  19036359 agagagggaacccataaactcattgacttaaggttttgggtaagagtgcggtgtttaagtctcttatg 19036292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 22303749 - 22303703
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  22303749 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 22303703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 41359855 - 41359814
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41359855 acccataaacccattgccttaaggttttgggtaagaatgtgg 41359814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54017647 - 54017594
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  54017647 agagagggaatccataaacccattgccttaaggttttgggtaagagtgtggtgt 54017594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 16868476 - 16868394
Alignment:
Q  7 ggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccatt 89  Q
    |||| |||||||| |||||||||||| |||||| ||||| |||| ||||||||||| |||| ||  || ||||||||||||||    
T  16868476 ggaatccataaactcattgccttaagattttggataagagtgtgatgtttaagtctcttatagttctgaacgtttggcccatt 16868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 43346883 - 43346837
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  43346883 gaacccataaactcattgccttaaggttttgggtaagagtgtggtgt 43346837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 53981609 - 53981707
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgtta-tggtcttggacgtttggcccattgccgctcccggggctccccggactccccaaca 121  Q
    |||| |||||||||||||    ||||||||| ||||||| ||| ||||||||||||||| ||  ||||||| |||||| | ||||||||||||||||||    
T  53981609 tgccataaggttttgggtggagatgtggtgtctaagtcttttagtggtcttggacgtttagctaattgccgttcccggcgttccccggactccccaaca 53981707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 12114652 - 12114608
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  12114652 acccataaacccattgtcttaaggttttgggtaagagtgtggtgt 12114608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22304045 - 22304001
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  22304045 acccataaacccattgccttaaggttttggataagagtgtggtgt 22304001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 22304637 - 22304681
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  22304637 acccataaacacattgccttaaggttttgggtaagagtgtggtgt 22304681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 23161986 - 23162070
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctcccc 108  Q
    ||||||||| ||||||||    ||||||||||||| | | |||||||| |||||||||||||||||| ||||||| || ||||||    
T  23161986 tgccttaagattttgggtggagatgtggtgtttaattttcttatggtcctggacgtttggcccattgtcgctccccggactcccc 23162070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 39389138 - 39389182
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  39389138 acccataaacccattgtcttaaggttttgggtaagagtgtggtgt 39389182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 52634743 - 52634783
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  52634743 acccataaacccattgccttaaggttttgggtaagagtgtg 52634783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 29644673 - 29644630
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  29644673 gaacccataaacccattgtcttaaggttttgggtaagagtgtgg 29644630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 32589771 - 32589806
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaaga 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  32589771 acccataaacccattgccttaaggttttgggtaaga 32589806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 23162368 - 23162322
Alignment:
Q  75 gacgtttggcccattgccgctcccggggctccccggactccccaaca 121  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||||    
T  23162368 gacgtttagtccattgccgctcccggagctccccggactccccaaca 23162322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 29644992 - 29644951
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  29644992 acccataaacccattgtcttaaggttttgggtaagagtgtgg 29644951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32462987 - 32462946
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  32462987 cataaacccattgccttaaggttttgagtaagagtgtggtgt 32462946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 37990726 - 37990685
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  37990726 cataaactcattgccttaaggttttgggtaagagtgtggtgt 37990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 47964608 - 47964567
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  47964608 acccataaacctattgccttaaggttttgggtaagagtgtgg 47964567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 4823723 - 4823767
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||    
T  4823723 acccataaactcattgccttaagattttgggtaagagtgtggtgt 4823767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 35946590 - 35946634
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||    
T  35946590 acccataaacccgttgccttaaggttttgggtaaaagtgtggtgt 35946634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 46546413 - 46546369
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||    
T  46546413 ccataaacccattgccttaaggttttgtgtaagagtgtgatgttt 46546369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 53596028 - 53596072
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| || |||||||||||||||||||| ||||||||    
T  53596028 acccataaacccgttaccttaaggttttgggtaagagtgtggtgt 53596072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 53596343 - 53596387
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| || |||||||||||||||||||| ||||||||    
T  53596343 acccataaacccgttaccttaaggttttgggtaagagtgtggtgt 53596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 1634404 - 1634369
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaaga 45  Q
    |||||||||||||||| |||||||||||||||||||    
T  1634404 acccataaacccattggcttaaggttttgggtaaga 1634369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 3135543 - 3135500
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||    
T  3135543 cccataaacccattgccttaaggttttagataagagtgtggtgt 3135500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3135165 - 3135119
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||||    
T  3135165 gaacccataaacccactgccataaggttttgagtaagagtgtggtgt 3135119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 8327970 - 8328016
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||  | |||||||||||||||||||||| ||||||||    
T  8327970 gaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgt 8328016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 42342177 - 42342139
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  42342177 cataaactcattgccttaaggttttgggtaagagtgtgg 42342139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 45395741 - 45395699
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||    
T  45395741 ccataaacccattgtcttaatgttttgggtaagagtgtggtgt 45395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 52635008 - 52635050
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggt 52  Q
    |||||||||| |||||||||||| |||||||||||| ||||||    
T  52635008 acccataaactcattgccttaagattttgggtaagagtgtggt 52635050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 33803342 - 33803301
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||||||| ||||||| |||||||||| |||||    
T  33803342 acccataaacccattgcattaaggtattgggtaagagtgtgg 33803301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 39336049 - 39336016
Alignment:
Q  21 cattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||| ||||||||    
T  39336049 cattgccttaaggttttgggtaagagtgtggtgt 39336016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 15772922 - 15772966
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| |||||| |||||||||||| ||||| ||||||||    
T  15772922 acccataaactcattgctttaaggttttggataagagtgtggtgt 15772966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 31190085 - 31190121
Alignment:
Q  18 acccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  31190085 acccatagccttaaggttttgggtaagagtgtggtgt 31190121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 37991063 - 37991023
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||| ||| ||||||||||||||||||||| ||||||||    
T  37991063 ataaactcatcgccttaaggttttgggtaagagtgtggtgt 37991023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 42342478 - 42342438
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||| |||||| ||||||||||||||||||| ||||    
T  42342478 acccataaatccattgtcttaaggttttgggtaagagtgtg 42342438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 48127905 - 48127861
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||| |||| ||||||| ||||| ||||||||    
T  48127905 acccataaacccattgctttaatgttttggataagagtgtggtgt 48127861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 53596543 - 53596587
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| |||||| |||| ||||||| ||||||||    
T  53596543 acccataaacccattgacttaagattttaggtaagagtgtggtgt 53596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 54018288 - 54018244
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |  ||||||||||||||||||||| ||||||||    
T  54018288 acccataaacctaacgccttaaggttttgggtaagagtgtggtgt 54018244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 25293662 - 25293562
Alignment:
Q  23 ttgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgctcccggggctccccggactccccaacag 122  Q
    |||| |||||||||||||||||| ||||||||| |||||| |||||||| || | ||||| ||||||||||||| ||||||||| |||||||||||||||    
T  25293662 ttgctttaaggttttgggtaagagtgtggtgttcaagtctcttatggtcctgtatgtttgacccattgccgctctcggggctcctcggactccccaacag 25293563  T
Q  123 t 123  Q
    |    
T  25293562 t 25293562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 17294645 - 17294689
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  17294645 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 17294689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 26661612 - 26661568
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  26661612 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 26661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 26661988 - 26661944
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||    
T  26661988 acccataaaccgattgccttaaggttttgggtaagagtgtggtgt 26661944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34364993 - 34365037
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||    
T  34364993 acccataaacccatagccttaaggttttgggtaagagtgtggtgt 34365037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 44290548 - 44290504
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  44290548 acccataaacccattgccttaaggttttgggtaagagtatggtgt 44290504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 3875418 - 3875380
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  3875418 cataaacccattgccttaaggttttaggtaagaatgtgg 3875380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 37556181 - 37556223
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  37556181 ccataaacccatagccttaaggttttgggtaagagtgtggtgt 37556223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 41759553 - 41759595
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  41759553 ccataaatccattgccttaaggttttgggtaagagtgtggtgt 41759595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3550791 - 3550832
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  3550791 cataaacccattgccttaaagttttgggtaagagtgtggtgt 3550832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 32168788 - 32168747
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  32168788 acccataaacccattgccttgaggttttgggtaagagtgtgg 32168747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 44290915 - 44290882
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaa 43  Q
    ||||||||||||||||||||||||||||||||||    
T  44290915 acccataaacccattgccttaaggttttgggtaa 44290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 14318935 - 14318979
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||    
T  14318935 acccataaatctattgccttaaggttttgggtaagagtgtggtgt 14318979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 27686593 - 27686529
Alignment:
Q  31 aggttttgggtaagaatgtggtgtttaagtctgtta-tggtcttggacgtttggcccattgccgc 94  Q
    ||||||||||||||| |||||||| ||||||| ||| ||||||||||| ||| | ||||||||||    
T  27686593 aggttttgggtaagagtgtggtgtctaagtctcttattggtcttggacatttagtccattgccgc 27686529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 32594806 - 32594762
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||    
T  32594806 acccataaactcattgtcttaaggttttgggtaagagtgtggtgt 32594762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 41157059 - 41157103
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| |||||| |||||||||||||||||| ||||||||    
T  41157059 acccataaactcattgctttaaggttttgggtaagagtgtggtgt 41157103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 41157443 - 41157487
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||    
T  41157443 acccataaacccattgcctttaggttttgagtaagagtgtggtgt 41157487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 44043862 - 44043818
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||    
T  44043862 acccataaacccattgtcttaagattttgggtaagagtgtggtgt 44043818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 45494062 - 45494020
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  45494062 ccataaacccattgccttaaagttttggataagagtgtggtgt 45494020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 66177 - 66136
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||| || ||||||||||||||||||||| |||||    
T  66177 acccataaacctatggccttaaggttttgggtaagagtgtgg 66136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 3537685 - 3537648
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  3537685 ataaacccattggcttaaggttttgggtaagagtgtgg 3537648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 11977015 - 11977056
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||| | |||||||||||||||||||||| ||||||||    
T  11977015 cataaacctaatgccttaaggttttgggtaagagtgtggtgt 11977056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 29798270 - 29798311
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||| |||| ||||| ||||||||    
T  29798270 cataaacccattgccttaaggtcttggataagagtgtggtgt 29798311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 30630730 - 30630693
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaaga 45  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  30630730 gaacccataaacacattgccttaaagttttgggtaaga 30630693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 34649504 - 34649541
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaaga 45  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  34649504 gaacccataaacctaatgccttaaggttttgggtaaga 34649541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 41142440 - 41142473
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaa 43  Q
    |||||||||||||||||||||||||||| |||||    
T  41142440 acccataaacccattgccttaaggtttttggtaa 41142473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5320055 - 5320011
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||| ||||||||||||||||||||| ||| ||||    
T  5320055 acccataaactcatagccttaaggttttgggtaagagtgtagtgt 5320011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 5981832 - 5981639
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgtta-tggtcttggacgtttggcccattgccgctcccg 99  Q
    |||| ||| ||||||||||| ||||||||||||||||||||    ||||||||| ||||||| ||| ||||| | || |||| |||||||||||||| ||    
T  5981832 agagaggggacccataaacc-attgccttaaggttttgggtggagatgtggtgtctaagtctcttactggtccttgaagtttagcccattgccgctctcg 5981734  T
Q  100 gggctccccggactccccaac--agtggtatcaaagtcgtggttaggcttagtggggagcgggagcgggatcctagtgt-gatcaggctagtgat 191  Q
      |||||||||||||||| |   | |||||||| |  | ||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||    
T  5981733 acgctccccggactcccccaagaaatggtatcagaaccctggttaggctcggtggggagtgggagcgggatcctagtgtggatcaggctagtgat 5981639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 12156750 - 12156691
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttat 67  Q
    |||| ||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||    
T  12156750 gaactcataaacccattgtcttaaggttttgggtaagagtgtgatgtttaagtctcttat 12156691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 30441154 - 30441197
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  30441154 cccataaacccattgccttaaggttttgggtaagagtgtggtgt 30441197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 147887 - 147932
Alignment:
Q  9 aacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||    
T  147887 aacccataaacctattgccttaaggttttgggtaagagtgtggtgt 147932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 3038380 - 3038339
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  3038380 acccataaacccattgccttaaggttttgggtaagagtgtgg 3038339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 5915935 - 5915979
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  5915935 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 5915979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9483277 - 9483233
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  9483277 acccataaacccattgtcttaaggttttgggtaagagtgtggtgt 9483233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 30359339 - 30359383
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||    
T  30359339 acccataaacccatagccttaaggttttgggtaagagtgtggtgt 30359383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 20995497 - 20995462
Alignment:
Q  19 cccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  20995497 cccattgccttaaggttttgggtaagaatgtggtgt 20995462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 5981518 - 5981420
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgtta-tggtcttggacgtttggcccattgccgctcccggggctccccggactccccaaca 121  Q
    ||||||||||||||||||   |||||||||| ||||||| ||| ||||  ||||||||| |||||||| | |||| || |||||| ||| |||||||||    
T  5981518 tgccttaaggttttgggtggaaatgtggtgtctaagtctcttattggttctggacgtttagcccattgtcactccaggcgctccctggagtccccaaca 5981420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 6651560 - 6651606
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||    
T  6651560 gaacccataaattcattgccttaaggttttgggtaagagtgtggtgt 6651606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 2954584 - 2954503
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgttat-ggtcttggacgtttggcccattgccgctcccggggct 104  Q
    |||||||||||||| |||    |||||| || ||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  2954584 tgccttaaggttttcggtggagatgtggcgtctaagtctcttattggtcctggacgtttgacccattgccgctcccggggct 2954503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3669758 - 3669799
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  3669758 cataaactcattgccttaaggttttgggtaagagtgtggtgt 3669799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 34834947 - 34834988
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  34834947 cataaactcattgccttaaggttttgggtaagagtgtggtgt 34834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 40518139 - 40518180
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  40518139 acccataaacccaatgccttaaggttttgggtaagagtgtgg 40518180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 3670128 - 3670172
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||    
T  3670128 acccataaacctatttccttaaggttttgggtaagagtgtggtgt 3670172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 18371750 - 18371707
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||    
T  18371750 acccataaacccat-gccttaaggttttgggtaagagtgtggtgt 18371707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 18372082 - 18372038
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||    
T  18372082 ccataaactcattgctttaaggttttgggtaagagtgtggtgttt 18372038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 33113457 - 33113413
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||    
T  33113457 acccataaactcattgccttaagattttgggtaagagtgtggtgt 33113413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34835277 - 34835321
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  34835277 acccataaactcattgccttaaagttttgggtaagagtgtggtgt 34835321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34835543 - 34835587
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  34835543 acccataaactcattgccttaaagttttgggtaagagtgtggtgt 34835587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34835809 - 34835853
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  34835809 acccataaactcattgccttaaagttttgggtaagagtgtggtgt 34835853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 32640618 - 32640587
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaaga 45  Q
    ||||||||||||||||||||||||||||||||    
T  32640618 ataaacccattgccttaaggttttgggtaaga 32640587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 6731961 - 6732007
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||    
T  6731961 gaacccataaattcattgccttaaggttttgagtaagagtgtggtgt 6732007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 9507853 - 9507891
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  9507853 cataaacccattaccttaaggttttgggtaagagtgtgg 9507891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 45122149 - 45122103
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  45122149 gaacccataaactcattttcttaaggttttgggtaagagtgtggtgt 45122103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 147519 - 147560
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  147519 acccataaacctattgccttaaagttttgggtaagagtgtgg 147560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 3671173 - 3671062
Alignment:
Q  68 ggtcttggacgtttggcccattgccgctcccggggctccccggactccccaacag--tggtatcaaagtcgtggttaggcttagtgggg-agcgggagcg 164  Q
    |||||| ||| ||| || |||||||||||| || | ||||| ||||||||||||   |||||||| |||| ||| |||||||  ||||| || |||||||    
T  3671173 ggtcttagacatttcgctcattgccgctccaggcgttccccagactccccaacaaattggtatcagagtc-tggctaggcttgctgggggagtgggagcg 3671075  T
Q  165 ggatcctagtgtg 177  Q
    |||||||||||||    
T  3671074 ggatcctagtgtg 3671062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 70364 - 70324
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||||| |||||||||||||| ||||||| ||||    
T  70364 acccataaacccactgccttaaggttttaggtaagagtgtg 70324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 8918854 - 8918814
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||| |||| ||||||||||||||||||| ||||    
T  8918854 acccataaacctattgacttaaggttttgggtaagagtgtg 8918814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 20870663 - 20870619
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  20870663 acccataaacccactgccttaagattttggataagagtgtggtgt 20870619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37544580 - 37544536
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| ||||| | |||||||||||||||||| ||||||||    
T  37544580 acccataaatccattactttaaggttttgggtaagagtgtggtgt 37544536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 40518650 - 40518690
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||||| || ||||||||||||||||||| ||||    
T  40518650 acccataaacccaatgacttaaggttttgggtaagagtgtg 40518690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 43274869 - 43274825
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |||| |||||||||||| |||||| ||||||||    
T  43274869 acccataaacctattgtcttaaggttttgagtaagagtgtggtgt 43274825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1868110 - 1868204
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccgct 95  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| |||  || |||||||| ||||| || |||||||||||||||||||||||    
T  1868110 agagagggaacccataaacccattgccttaaagttttgggtaagagtgttatgattaagtctcttatgatcctggacgtttggcccattgccgct 1868204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 47680703 - 47680874
Alignment:
Q  24 tgccttaaggttttgggtaagaatgtggtgtttaagtctgttat-ggtcttggacgtttggcccattgccgctcccggggctccccggactccccaacag 122  Q
    ||||||||||||||||||    ||||||||| ||||||| |||| |||| |||||||||  | ||||| ||||||||  ||||| | ||| ||||||||     
T  47680703 tgccttaaggttttgggtggagatgtggtgtctaagtctcttattggtcctggacgtttaactcattgtcgctcccgatgctcctcagacaccccaacaa 47680802  T
Q  123 -tggtatcaaagtcgtggttaggcttagtgggg-agcgggagcgggatcctagtg-tgatcaggctagtgat 191  Q
     |||||||| || | |||||||||| ||||||| |||||||| ||||||||||||  |||||||||||||||    
T  47680803 ctggtatcagagccctggttaggctcagtgggggagcgggagtgggatcctagtgaggatcaggctagtgat 47680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 49302974 - 49303018
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  49302974 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 49303018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 50630843 - 50630799
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  50630843 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 50630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 54936264 - 54936308
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  54936264 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 54936308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 1731735 - 1731689
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1731735 acccataaaccaattgccttaaggttttgggtaagagtgtggtgttt 1731689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 25483406 - 25483448
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  25483406 ccataaacccattgccttaaggttttgggtaagagtgtggtgt 25483448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 44620422 - 44620467
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||    
T  44620422 cccataaacccattgccttaaggttttgggtaagagtgtgatgttt 44620467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 3340875 - 3340919
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  3340875 acccataaacccactgccttaaggttttgggtaagagtgtggtgt 3340919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 11197294 - 11197338
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  11197294 acccataaacccattgccttagggttttgggtaagagtgtggtgt 11197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 18932837 - 18932793
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  18932837 acccataaacccattgccttaaggttttaggtaagagtgtggtgt 18932793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22028049 - 22028005
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  22028049 acccataaacatattgccttaaggttttgggtaagaatgtggtgt 22028005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 36629305 - 36629349
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  36629305 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 36629349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 55933212 - 55933168
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||    
T  55933212 acccataaacccattgccttaaagttttgggtaagagtgtggtgt 55933168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 52884957 - 52885000
Alignment:
Q  12 ccataaacccattgccttaaggtttt-gggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  52884957 ccataaacccattgccttaaggttttggggtaagaatgtggtgt 52885000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 3271853 - 3271895
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  3271853 gaacccataaacctattgccttaaggttttgggtaagagtgtg 3271895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 4955402 - 4955364
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  4955402 cataaacccattgccttaaggttttgggtaagagtgtgg 4955364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 22183352 - 22183311
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  22183352 acccataaacccattgccttaaggttttggataagagtgtgg 22183311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 23817766 - 23817725
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  23817766 cataaactcattgccttaaggttttgggtaagagtgtggtgt 23817725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 31691220 - 31691261
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  31691220 acccataaactcattgccttaaggttttgggtaagagtgtgg 31691261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 34646734 - 34646693
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  34646734 cataaactcattgccttaaggttttgggtaagagtgtggtgt 34646693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 39404466 - 39404510
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| || |||||||||||||||| |||||||||||||    
T  39404466 acccataaacctatagccttaaggttttgggcaagaatgtggtgt 39404510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 41370425 - 41370469
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||    
T  41370425 acccataaacccattgccttaaagttttgggtaagagtgtagtgt 41370469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 49880228 - 49880272
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||    
T  49880228 acccataaacccactgccttaaggttttgggtaagagcgtggtgt 49880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 50002494 - 50002538
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||    
T  50002494 acccataaatccattgtcttaaggttttgggtaagagtgtggtgt 50002538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 51681609 - 51681653
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgttta 57  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||    
T  51681609 catatacccattgccttaagattttgggtaagagtgtggtgttta 51681653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 54017683 - 54017643
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  54017683 acccataaacccattgccttaaggttttaggtaagagtgtg 54017643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 54108981 - 54109024
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||    
T  54108981 acccataaacccattgccttaa-gttttgggtaagagtgtggtgt 54109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 39792943 - 39792904
Alignment:
Q  15 taaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  39792943 taaactcattgccttaaggttttgggtaagagtgtggtgt 39792904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 44621073 - 44621116
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||    
T  44621073 cataaactcattgtcttaaggttttgggtaagagtgtggtgttt 44621116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 54343087 - 54343052
Alignment:
Q  19 cccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54343087 cccattgccttaaggttttgggtaagagtgtggtgt 54343052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 10245989 - 10246031
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||  ||||||||||||||||||||| ||||||||    
T  10245989 ccataaacccaaagccttaaggttttgggtaagagtgtggtgt 10246031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 10396484 - 10396526
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggt 52  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||    
T  10396484 acccataaacccattgccttagggttttggataagagtgtggt 10396526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 20825904 - 20825950
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    |||||||||||  | ||||||||||||||||||||| ||||||||||    
T  20825904 acccataaacctttagccttaaggttttgggtaagagtgtggtgttt 20825950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 36608747 - 36608705
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||    
T  36608747 ccataaatccattgtcttaaggttttgggtaagagtgtggtgt 36608705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 49076921 - 49076875
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||  |||||||||||||||| ||| ||||||||    
T  49076921 gaacccataaacccataaccttaaggttttgggttagagtgtggtgt 49076875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 2741139 - 2741180
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    ||||||||  |||||||||||||||||||||||||| |||||    
T  2741139 acccataactccattgccttaaggttttgggtaagagtgtgg 2741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 15841453 - 15841416
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  15841453 cataaacacattgccttaaggttttgggtaagagtgtg 15841416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 32941208 - 32941171
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  32941208 cataaactcattgccttaaggttttgggtaagagtgtg 32941171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 52884767 - 52884808
Alignment:
Q  14 ataaacccattgccttaaggtttt-gggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  52884767 ataaacccattgccttaaggttttggggtaagagtgtggtgt 52884808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 3244539 - 3244499
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||| ||||| ||||| ||||||||||||||||||    
T  3244539 acccataaactcattgtcttaaagttttgggtaagaatgtg 3244499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 8445748 - 8445808
Alignment:
Q  118 aacagtggtatcaaagtcgtggttaggcttagtgggg-agcgggagcgggatcctagtgtg 177  Q
    ||||||||||||| || | ||||||||||  |||||| |||||||| ||||||||||||||    
T  8445748 aacagtggtatcagagccctggttaggctcggtggggtagcgggagtgggatcctagtgtg 8445808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 10396199 - 10396243
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||| |||||| |||||||  |||||||    
T  10396199 acccataaacccattgccttagggttttaggtaagagggtggtgt 10396243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22028457 - 22028413
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  22028457 acccataaactcattgtcttaatgttttgggtaagagtgtggtgt 22028413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 36572087 - 36572131
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||||||||||||||||||| ||| | ||||||    
T  36572087 acccataaatccattgccttaaggttttgggttagagtatggtgt 36572131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 45484785 - 45484817
Alignment:
Q  8 gaacccataaacccattgccttaaggttttggg 40  Q
    ||||||||||||||| |||||||||||||||||    
T  45484785 gaacccataaacccaatgccttaaggttttggg 45484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 45496877 - 45496917
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||| ||||| ||||||||||||||||||| ||||||||    
T  45496877 ataaactcattgtcttaaggttttgggtaagagtgtggtgt 45496917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 197788 - 197878
Alignment:
Q  1 agagtgggaacccataaacccattgccttaaggttttgggtaagaatgtggtgtttaagtctgttatggtcttggacgtttggcccattgccg 93  Q
    |||| ||||| ||||||| ||||||||||||| ||  || ||||| |||||||||||||||| |||||||| |||||||||||| ||||||||    
T  197788 agagagggaatccataaatccattgccttaagatt--ggataagagtgtggtgtttaagtctcttatggtcctggacgtttggctcattgccg 197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 604 - 560
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  604 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 36178695 - 36178651
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  36178695 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 36178651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 37895153 - 37895105
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  37895153 gaacacataaacccattgccttaaggttttgggtaagagtgtggtgttt 37895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 36178265 - 36178218
Alignment:
Q  6 gggaacccataaacccattgccttaaggttttgggtaagaatgtggtg 53  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  36178265 gggaacccataaacccattgccttaagattttgggtaagagtgtggtg 36178218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 37106256 - 37106302
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 56  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  37106256 acccataaacccatttccttaaggttttgggtaagagtgtggtgttt 37106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 14745384 - 14745343
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  14745384 acccataaacccattgccttaaggttttgggtaagagtgtgg 14745343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 14745757 - 14745716
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  14745757 acccataaacccattgccttaaggttttgggtaagagtgtgg 14745716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 15880331 - 15880372
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  15880331 acccataaacccattgccttaaggttttgggtaagagtgtgg 15880372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6421799 - 6421843
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||    
T  6421799 acccataaacctattgccttaaggttttgggtaagagtgtggtgt 6421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 28254327 - 28254283
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  28254327 acccataaactcattgccttaaggttttgggtaagagtgtggtgt 28254283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 29874113 - 29874072
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  29874113 acccataaacccattgccttaaggttttggataagagtgtgg 29874072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 35580812 - 35580779
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaaga 45  Q
    ||||||||||||||||||||||||||||||||||    
T  35580812 ccataaacccattgccttaaggttttgggtaaga 35580779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 962666 - 962706
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  962666 acccataaacccattgtcttaaggttttgggtaagagtgtg 962706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3672773 - 3672813
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  3672773 ataaacccattgccttaagattttgggtaagagtgtggtgt 3672813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5542715 - 5542671
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||    
T  5542715 acccataaacctattgccttaaggtttttggtaagagtgtggtgt 5542671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6422178 - 6422222
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||    
T  6422178 acccataaacccatagccttaaggttttaggtaagagtgtggtgt 6422222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 7598296 - 7598340
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||    
T  7598296 acccataaactcatagccttaaggttttgggtaagaatatggtgt 7598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 15511585 - 15511541
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||    
T  15511585 acccataaacccattgtcttaagattttgggtaagagtgtggtgt 15511541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 31468840 - 31468800
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  31468840 acccataaactcattgccttaaggttttgggtaagagtgtg 31468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 37105992 - 37106036
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||    
T  37105992 acccataaactcattgccttaagattttgggtaagagtgtggtgt 37106036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 35580530 - 35580495
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaaga 45  Q
    |||||||||| |||||||||||||||||||||||||    
T  35580530 acccataaactcattgccttaaggttttgggtaaga 35580495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 40679721 - 40679678
Alignment:
Q  8 gaacccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||||| |||||||| |||||||||||| |||||    
T  40679721 gaacccataaacccatcgccttaagattttgggtaagagtgtgg 40679678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 5543086 - 5543044
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||    
T  5543086 ccataaacctattgccttaagattttgggtaagagtgtggtgt 5543044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 28531403 - 28531361
Alignment:
Q  11 cccataaacccattgccttaaggttttgggtaagaatgtggtg 53  Q
    ||||||||| |||||||||||| |||||||||||| |||||||    
T  28531403 cccataaactcattgccttaagattttgggtaagagtgtggtg 28531361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 31385805 - 31385835
Alignment:
Q  10 acccataaacccattgccttaaggttttggg 40  Q
    |||||||||||||||||||||||||||||||    
T  31385805 acccataaacccattgccttaaggttttggg 31385835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 33731718 - 33731760
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||| |||||||||||||||||||||||| | ||||||    
T  33731718 ccataaacctattgccttaaggttttgggtaagagtatggtgt 33731760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 40053288 - 40053414
Alignment:
Q  67 tggtcttggacgtttggcccattgccgctcccggggctccccggactccccaac-agtggtatcaaagtcgtggttaggcttagtggggagcgggagcgg 165  Q
    |||||||| |||||| || ||||||||||||||  |||||| ||||||||| || | |||||||| || | |  |||||||   |||||||||| || ||    
T  40053288 tggtcttgaacgtttagctcattgccgctcccgtcgctcccaggactcccctacaattggtatcagagccctcattaggctcgatggggagcggaagtgg 40053387  T
Q  166 gatcctagtgt-gatcaggctagtgat 191  Q
    ||||||||  | |||||||||||||||    
T  40053388 gatcctagcctggatcaggctagtgat 40053414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 6421456 - 6421497
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||    
T  6421456 cataaactcattgccttgaggttttgggtaagagtgtggtgt 6421497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 30323536 - 30323573
Alignment:
Q  14 ataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  30323536 ataaactcattgccttaaggttttgggtaagagtgtgg 30323573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 36005970 - 36005937
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaa 43  Q
    |||||||||| |||||||||||||||||||||||    
T  36005970 acccataaactcattgccttaaggttttgggtaa 36005937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 41283565 - 41283524
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||| ||||||||||||||||| ||||||| |||||    
T  41283565 acccataaactcattgccttaaggttttaggtaagagtgtgg 41283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 42514717 - 42514758
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtgg 51  Q
    |||||||||||||| |||||||| |||||||||||| |||||    
T  42514717 acccataaacccatcgccttaagattttgggtaagagtgtgg 42514758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6421694 - 6421738
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||| |||| || |||||||||||||||| ||||||||    
T  6421694 acccataaacctattgactaaaggttttgggtaagagtgtggtgt 6421738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 29676976 - 29677020
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||    
T  29676976 acccataaacccattgccttaaggctttaagtaagagtgtggtgt 29677020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 33561541 - 33561501
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtg 50  Q
    |||||||||| ||||| ||||||||||||||||||| ||||    
T  33561541 acccataaactcattgtcttaaggttttgggtaagagtgtg 33561501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 36178356 - 36178324
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaaga 45  Q
    ||||||||||||| |||||||||||||||||||    
T  36178356 cataaacccattgtcttaaggttttgggtaaga 36178324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37632687 - 37632643
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||  | |||||||||||||||||| ||||||||    
T  37632687 acccataaacccataactttaaggttttgggtaagagtgtggtgt 37632643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 1781 - 1737
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  1781 acccataaacccattgccttaaggtttttggtaagagtgtggtgt 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 1193 - 1152
Alignment:
Q  13 cataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  1193 cataaacccattgccttaaggttttgggtaagagtatggtgt 1152  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 47430 - 47472
Alignment:
Q  12 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  47430 ccataaacccattgccttaaagttttgggtaaaaatgtggtgt 47472  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 5050 - 5094
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||    
T  5050 acccataaactcattgccttatggttttgggtaagagtgtggtgt 5094  T

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Target: scaffold0078; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 5425 - 5469
Alignment:
Q  10 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 54  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||    
T  5425 acccataaacccattgccttaagattttggataagagtgtggtgt 5469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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