View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3547_high_74 (Length: 246)
Name: NF3547_high_74
Description: NF3547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3547_high_74 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22085929 - 22085701
Alignment:
| Q |
1 |
tattttcctaatgaaacacccttttaaaagctattttggtactaggtgaactcttatgagcttatggaagttctatgaatactctcaagttcaaaacctt |
100 |
Q |
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| T |
22085929 |
tattttcctaatgaaacacccttttaaaagctattttggtactaagtgaactcttatgagcttatggaagttctatgaatactctcaagttcaaaacctt |
22085830 |
T |
|
| Q |
101 |
agttcataccaaagaaactgaaatacaaaataataatggcaaactaggactactgcaagaacataaaaaacacagcgaaattcaaatcaaggggaaatgt |
200 |
Q |
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||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22085829 |
agttcatacggaagcaactgaaatacaaaataataatggcaaactaggactactgcaagaacataaaaaacacagcgaaattcaaatcaaggggaaatgt |
22085730 |
T |
|
| Q |
201 |
tatagaccttgactaataagcatacaacc |
229 |
Q |
| |
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|||||| |||||||||||||||||||||| |
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| T |
22085729 |
tatagatcttgactaataagcatacaacc |
22085701 |
T |
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