View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3547_low_34 (Length: 352)

Name: NF3547_low_34
Description: NF3547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3547_low_34
NF3547_low_34
[»] chr8 (5 HSPs)
chr8 (1-309)||(36934671-36934977)
chr8 (1-53)||(34897086-34897136)
chr8 (1-53)||(24362210-24362260)
chr8 (1-53)||(31236585-31236635)
chr8 (1-52)||(39954288-39954337)
[»] chr7 (10 HSPs)
chr7 (1-79)||(32308121-32308197)
chr7 (1-53)||(19206051-19206101)
chr7 (8-72)||(35297661-35297723)
chr7 (3-51)||(22306534-22306581)
chr7 (8-79)||(26329364-26329433)
chr7 (1-79)||(24339643-24339719)
chr7 (1-53)||(20549792-20549842)
chr7 (1-53)||(21828413-21828463)
chr7 (1-45)||(29787385-29787427)
chr7 (1-53)||(42720898-42720948)
[»] chr1 (18 HSPs)
chr1 (6-77)||(5944287-5944358)
chr1 (1-62)||(6427351-6427410)
chr1 (4-79)||(44482234-44482307)
chr1 (1-79)||(36905998-36906074)
chr1 (1-53)||(9709821-9709871)
chr1 (1-52)||(12443469-12443518)
chr1 (1-79)||(9629882-9629958)
chr1 (1-79)||(25361887-25361963)
chr1 (6-77)||(31694694-31694765)
chr1 (1-78)||(5376483-5376558)
chr1 (1-45)||(398781-398823)
chr1 (19-80)||(6612152-6612213)
chr1 (1-53)||(25098563-25098613)
chr1 (1-45)||(36878462-36878504)
chr1 (1-53)||(39953154-39953204)
chr1 (1-45)||(9033023-9033066)
chr1 (1-37)||(18471299-18471335)
chr1 (1-79)||(34371715-34371790)
[»] chr4 (8 HSPs)
chr4 (1-79)||(22234872-22234949)
chr4 (1-53)||(35723392-35723443)
chr4 (1-54)||(36635325-36635376)
chr4 (1-45)||(8423734-8423776)
chr4 (1-61)||(15029766-15029824)
chr4 (1-53)||(40613451-40613501)
chr4 (1-52)||(22440609-22440658)
chr4 (1-45)||(49431026-49431069)
[»] chr6 (12 HSPs)
chr6 (1-53)||(7265601-7265651)
chr6 (1-53)||(19040353-19040403)
chr6 (1-53)||(30866152-30866202)
chr6 (3-78)||(9617437-9617510)
chr6 (1-55)||(5462687-5462739)
chr6 (1-62)||(7151413-7151472)
chr6 (1-62)||(9025493-9025552)
chr6 (1-53)||(7377980-7378030)
chr6 (1-53)||(9629384-9629434)
chr6 (1-77)||(16766698-16766772)
chr6 (1-61)||(32511666-32511724)
chr6 (1-53)||(7027242-7027293)
[»] chr5 (5 HSPs)
chr5 (1-77)||(3966504-3966578)
chr5 (1-62)||(6471888-6471947)
chr5 (1-53)||(30502396-30502446)
chr5 (1-53)||(30542739-30542789)
chr5 (1-72)||(32766932-32767001)
[»] chr3 (7 HSPs)
chr3 (1-53)||(7928451-7928501)
chr3 (1-76)||(8039820-8039893)
chr3 (1-53)||(40993343-40993394)
chr3 (1-79)||(16192732-16192808)
chr3 (1-45)||(5407263-5407305)
chr3 (6-62)||(25948886-25948940)
chr3 (1-53)||(7948959-7949010)
[»] chr2 (7 HSPs)
chr2 (1-53)||(21616763-21616813)
chr2 (6-45)||(5040738-5040777)
chr2 (1-51)||(28677910-28677958)
chr2 (1-79)||(44860321-44860397)
chr2 (1-53)||(23718027-23718077)
chr2 (1-53)||(24105699-24105749)
chr2 (1-53)||(37411252-37411302)
[»] scaffold0171 (1 HSPs)
scaffold0171 (20-80)||(23529-23589)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-53)||(44533-44583)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-45)||(71724-71768)


Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 36934671 - 36934977
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacgatcgatgcgtgtcagacaacgg 100  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36934671 acaccgctaataattcga--aaaaatcacataattcattgtaattatatgtgttggcgtcgtttcgatatcggacacgatcgatgcgtgtcagacaacgg 36934768  T
Q  101 gacaggctaatccaagaagtgtatgtgcttcgtaacaatacagatgggagtgactgaccttgaatgacataagcaactttagaggaatctgcataatgag 200  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36934769 gacaggctaatccaagaagtgtcagtgcttggtaacaatacagatgggagtgactgaccttgaatgacataagcaactttagaggaatctgcataatgag 36934868  T
Q  201 gaagagcaaagccttgaggcttaagcacaaggcgaccagcaccaacgttggttgaggctaacactggcatttgagaactcgaccaaacgtagtaactacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36934869 gaagagcaaagccttgaggcttaagcacaaggcgaccagcaccaacgttggttgaggctaacactggcatttgagaactcgaccaaacgtagtaactacc 36934968  T
Q  301 accgtctcc 309  Q
    |||||||||    
T  36934969 accgtctcc 36934977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34897086 - 34897136
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  34897086 acaccgctaataatttgagaaaa--tcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24362260 - 24362210
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||| |||||||    
T  24362260 acaccgctaataatttgagagaa--tcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31236635 - 31236585
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  31236635 acactgctaataatttgagaaaa--tcacataattcaatgtaattatatgtgt 31236585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39954337 - 39954288
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtg 52  Q
    |||||||||||||||||||  |||||||||||||| | ||||||| ||||||    
T  39954337 acaccgctaataatttgag--aaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32308121 - 32308197
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||||||||  | ||||| ||| ||| ||||||||    
T  32308121 acaccgctaataatttgagaaaa--tcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacga 32308197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19206051 - 19206101
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| |||||||    
T  19206051 acaccgctaataatttgagaaaa--tcacataattcattataattatatgtgt 19206101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 35297723 - 35297661
Alignment:
Q  8 taataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcg 72  Q
    ||||||||||||||||  |||||||||||||| ||||| |||||||||| ||||| | |||||||    
T  35297723 taataatttgagaaaa--tcacataattcattataattatatgtgttggtgtcgtgttgatgtcg 35297661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 22306534 - 22306581
Alignment:
Q  3 accgctaataatttgagaaaaaatcacataattcattgtaattgtatgt 51  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||    
T  22306534 accgctaataatttga-aaaaaatcacataattcagtgtaatcgtatgt 22306581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 26329433 - 26329364
Alignment:
Q  8 taataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||||||||||  |||| |||||| ||||||| ||||||| |||||||| ||| |||| |||||||    
T  26329433 taataatttgagaaaaa--cacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacga 26329364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24339643 - 24339719
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||| |||||||||||||  ||||||||||||||||| |||||||  | |||| || ||||| ||| ||||||||||||    
T  24339643 acacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 24339719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20549792 - 20549842
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||  |||||||| ||||||| ||||||| |||||||    
T  20549792 acaccgctaataatttgag--aaaatcacgtaattcagtgtaattatatgtgt 20549842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21828463 - 21828413
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||| || |||||||||||||  ||||||||| ||||||||||||||||||    
T  21828463 acaccgttagtaatttgagaaaa--tcacataatccattgtaattgtatgtgt 21828413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29787427 - 29787385
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    |||||||||||||||||||  |||||||||||||||| |||||||    
T  29787427 acaccgctaataatttgag--aaaatcacataattcagtgtaatt 29787385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42720948 - 42720898
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    ||||||||||||||||||  ||||||||||||||| | ||||||| |||||||    
T  42720948 acaccgctaataatttga--aaaaatcacataattaaatgtaattatatgtgt 42720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 5944287 - 5944358
Alignment:
Q  6 gctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacac 77  Q
    ||||||||||||| |||||||||||||||||| ||||||| || |||| || ||||| |||||| |||||||    
T  5944287 gctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacac 5944358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6427351 - 6427410
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgt 62  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| |||||||||| |||||    
T  6427351 acaccgctaataatttgagaaaa--tcacataattcaatgtaattatatgtgttggtgtcgt 6427410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 44482234 - 44482307
Alignment:
Q  4 ccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    ||||| ||||||||||||||  |||||||||||| ||||||| ||||||| || ||||| ||| ||||||||||||    
T  44482234 ccgcttataatttgagaaaa--tcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 44482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36905998 - 36906074
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||||||| ||||||||  ||||||||||||  |||||| ||||||||||||| || ||  ||||||||||||    
T  36905998 acaccgctaataatctgagaaaa--tcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacacga 36906074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9709821 - 9709871
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  ||||||||||| |||||||| |||||||    
T  9709821 acaccgctaataatttgagaaaa--tcacataattcgttgtaattatatgtgt 9709871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12443518 - 12443469
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtg 52  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  12443518 acacagctaataatttgagaaaa--tcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9629958 - 9629882
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||||||||||| ||||  ||| |||||||| ||| ||| || |||| || ||||| ||||||||||||||||    
T  9629958 acaccgctaataatttgataaaa--tcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacga 9629882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25361887 - 25361963
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    ||||| || ||||||||||||||  |||||||||||| ||||||| |||||||  | ||||| ||| ||||||||||||    
T  25361887 acaccactgataatttgagaaaa--tcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacga 25361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 31694765 - 31694694
Alignment:
Q  6 gctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacac 77  Q
    ||||||||||||| |||||||||||||||||| | |||||  | |||| || ||||| ||| ||||||||||    
T  31694765 gctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5376558 - 5376483
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacg 78  Q
    |||||||||||||||| |||||| |  |||||||||| |||||||  | |||| || ||||| |||||||||||||||    
T  5376558 acaccgctaataatttaagaaaata--acataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 398823 - 398781
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||    
T  398823 acaccgctaataatttga--aaaaatcacataattcagtgtaatt 398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 6612213 - 6612152
Alignment:
Q  19 gaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacgat 80  Q
    |||||||| |||||||||| |||||||  | |||| || ||||| |||||||||||||||||    
T  6612213 gaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgat 6612152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25098613 - 25098563
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||| ||||||||||||||  |||||||||||| ||||||| |||||||    
T  25098613 acaccgctgataatttgagaaaa--tcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36878462 - 36878504
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    |||||||||||||||||||  |||||||||||||||| |||||||    
T  36878462 acaccgctaataatttgag--aaaatcacataattcagtgtaatt 36878504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39953204 - 39953154
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||| ||||||  |||||||||| | |||||||||||||||    
T  39953204 acaccgctaataattttagaaaa--tcacataatttagtgtaattgtatgtgt 39953154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9033066 - 9033023
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||    
T  9033066 acaccactaataatttga-aaaaaatcacataattcagtgtaatt 9033023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18471299 - 18471335
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattca 37  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  18471299 acacagctaataatttgaaaaaaaatcacataattca 18471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34371715 - 34371790
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||||||||   || |||||||||||||||| ||||||| ||||||| || ||||| | | ||||||| ||||    
T  34371715 acaccgctaataatt---gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacga 34371790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22234949 - 22234872
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||| ||||||| || ||||| ||| |||| |||||||    
T  22234949 acaccgctaaaaatttga-aaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacga 22234872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35723443 - 35723392
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||| |||||||    
T  35723443 acaccgctaataatttgagaaaata-cacataattcaatgtaattatatgtgt 35723392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36635325 - 36635376
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgtt 54  Q
    ||||| |||||||||||||||||  |||||||||||| ||||||| ||||||||    
T  36635325 acaccactaataatttgagaaaa--tcacataattcagtgtaattatatgtgtt 36635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8423776 - 8423734
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    |||||||||||||||||||  |||||||||||||||| |||||||    
T  8423776 acaccgctaataatttgag--aaaatcacataattcagtgtaatt 8423734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15029766 - 15029824
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcg 61  Q
    |||| |||||||||||||  ||| ||||||||||||| ||||||| |||||||||| ||||    
T  15029766 acactgctaataatttga--aaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40613451 - 40613501
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||| ||||||||||  |||||||||||| ||||||| |||||||    
T  40613451 acaccgctaatattttgagaaaa--tcacataattcagtgtaattatatgtgt 40613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22440658 - 22440609
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtg 52  Q
    |||||| ||||||||||||||||  |||||||||||| ||||||| ||||||    
T  22440658 acaccgttaataatttgagaaaa--tcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49431026 - 49431069
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||    
T  49431026 acacagctaataatttga-aaaaaatcacataattcagtgtaatt 49431069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7265651 - 7265601
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  7265651 acaccgctaataatttgagaaaa--tcacataattcagtgtaattatatgtgt 7265601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19040353 - 19040403
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  19040353 acaccgctaataatttgagaaaa--tcacataattcagtgtaattatatgtgt 19040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30866202 - 30866152
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  30866202 acaccgctaataatttgagaaaa--tcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 9617437 - 9617510
Alignment:
Q  3 accgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacg 78  Q
    |||| ||||||||||||||||  |||||||||||| ||||||| ||||||| || |||||  || |||||||||||    
T  9617437 accggtaataatttgagaaaa--tcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggacacg 9617510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5462687 - 5462739
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttg 55  Q
    |||||| ||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  5462687 acaccgttaataatttgagaaaa--tcacataattcattgtaattatatatgttg 5462739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7151413 - 7151472
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgt 62  Q
    ||||| ||||||||||||  ||||||||||||||| | ||||||| |||||||||| |||||    
T  7151413 acacctctaataatttga--aaaaatcacataattaagtgtaattatatgtgttggtgtcgt 7151472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9025552 - 9025493
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgt 62  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||| ||||||| || |||||    
T  9025552 acactgctaataatttgagaaaa--tcacataattcagtgtaattatatgtgtcggtgtcgt 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7377980 - 7378030
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||| ||||||||||||  |||||||||||| ||||||| |||||||    
T  7377980 acaccgctaaaaatttgagaaaa--tcacataattcaatgtaattatatgtgt 7378030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9629384 - 9629434
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    ||||||| |||||||||||||||  |||||||||||| ||||||| |||||||    
T  9629384 acaccgccaataatttgagaaaa--tcacataattcaatgtaattatatgtgt 9629434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16766698 - 16766772
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacac 77  Q
    |||| |||||||||||||  ||||||||||||||||| |||||||  | |||| || ||||| ||| ||||||||||    
T  16766698 acacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32511724 - 32511666
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcg 61  Q
    |||||||||||||||| ||||||  |||||||||||| ||||||| || ||||||| ||||    
T  32511724 acaccgctaataatttaagaaaa--tcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7027242 - 7027293
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    ||||| || ||||||||| |||||||||||||||||| ||||||| |||||||    
T  7027242 acacccctgataatttga-aaaaaatcacataattcagtgtaattatatgtgt 7027293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3966504 - 3966578
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacac 77  Q
    |||||||||||||||||||  ||||||||| |||||| ||||||| ||||||| || ||||| ||  ||||||||||    
T  3966504 acaccgctaataatttgag--aaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6471947 - 6471888
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgt 62  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||| ||||||| || |||||    
T  6471947 acacggctaataatttgagaaaa--tcacataattcagtgtaattatatgtgtgggtgtcgt 6471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30502446 - 30502396
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||  |||||||| ||||||| ||||||| |||||||    
T  30502446 acaccgctaataatttgag--aaaatcacttaattcagtgtaattatatgtgt 30502396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30542789 - 30542739
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||  |||||||| ||||||| ||||||| |||||||    
T  30542789 acaccgctaataatttgag--aaaatcacttaattcagtgtaattatatgtgt 30542739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32767001 - 32766932
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcg 72  Q
    |||||||||||||||||||  |||||| || |||||| ||||||| |||||||| | ||||| ||| |||||    
T  32767001 acaccgctaataatttgag--aaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcg 32766932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7928451 - 7928501
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  7928451 acaccgctaataatttga--aaaaatcacataattcagtgtaattatatgtgt 7928501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8039893 - 8039820
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggaca 76  Q
    |||||||||||||||||||  ||||| | |||||||| ||||||| ||||||| || ||||| ||| |||||||||    
T  8039893 acaccgctaataatttgag--aaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40993394 - 40993343
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||| | |||||||||||||||||| ||||||| |||||||    
T  40993394 acaccgctaataatttaa-aaaaaatcacataattcagtgtaattatatgtgt 40993343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16192808 - 16192732
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||| ||||||||||||  ||||| |||||||||| ||||||| |||||||||  ||||| ||| |||| |||||||    
T  16192808 acaccgttaataatttgag--aaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacga 16192732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5407305 - 5407263
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  5407305 acaccgctaaaaatttgagaaaa--tcacataattcattgtaatt 5407263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 25948940 - 25948886
Alignment:
Q  6 gctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgt 62  Q
    |||||||||||||  ||||||||||||||||| ||||||| || ||||||| |||||    
T  25948940 gctaataatttga--aaaaatcacataattcagtgtaattataagtgttggtgtcgt 25948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7948959 - 7949010
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||| ||||| ||||||||||| | |||||||||| |||||||||||||||    
T  7948959 acaccgataatagtttgagaaaaa-tgacataattcaatgtaattgtatgtgt 7949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21616763 - 21616813
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  21616763 acaccgctaataatttgagaaaa--tcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 5040738 - 5040777
Alignment:
Q  6 gctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  5040738 gctaataatttgaaaaaaaatcacataattcaatgtaatt 5040777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28677910 - 28677958
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgt 51  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  28677910 acaccgctaataatttga--aaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44860321 - 44860397
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacga 79  Q
    |||||||||||||||||||  |||||| ||||||||| ||||||| ||||||| || ||||| | | ||| ||||||||    
T  44860321 acaccgctaataatttgag--aaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacga 44860397  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23718027 - 23718077
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||  ||| |||||||||||| ||||||| |||||||    
T  23718027 acaccgctaataatttgag--aaagtcacataattcagtgtaattatatgtgt 23718077  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24105699 - 24105749
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||  ||| |||||||||||| ||||||| |||||||    
T  24105699 acaccgctaataatttgag--aaagtcacataattcagtgtaattatatgtgt 24105749  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37411302 - 37411252
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||||||||||||  |||||||||||||||| ||| ||| |||||||    
T  37411302 acaccgctaataatttgag--aaaatcacataattcagtgtgattatatgtgt 37411252  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 23529 - 23589
Alignment:
Q  20 aaaaaatcacataattcattgtaattgtatgtgttggcgtcgtttcgatgtcggacacgat 80  Q
    |||||||||||||||||| ||||||| || ||||  | ||||||||| |||||||||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgat 23589  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44583 - 44533
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaattgtatgtgt 53  Q
    |||||||||| ||||||||||||  |||||||||||| ||||||| |||||||    
T  44583 acaccgctaaaaatttgagaaaa--tcacataattcagtgtaattatatgtgt 44533  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 71724 - 71768
Alignment:
Q  1 acaccgctaataatttgagaaaaaatcacataattcattgtaatt 45  Q
    |||| ||||||||||||| ||||||||||| |||||| |||||||    
T  71724 acacagctaataatttgaaaaaaaatcacacaattcagtgtaatt 71768  T

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