View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3547_low_70 (Length: 250)
Name: NF3547_low_70
Description: NF3547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3547_low_70 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 46324762 - 46325006
Alignment:
| Q |
1 |
ttatgactccagatattcacaaaatgacagactgaaaagtatgtcctgcttattttcaccgtcaaatttacttgaaagacatcatgtaccatgtgtatgt |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46324762 |
ttatgactccagatattaacaaaatgacagactgaaaagtatgtcctgcttattttcaccgtcaaatttacttgaaagacatcatgtaccatgtgtatgt |
46324861 |
T |
|
| Q |
101 |
gaaaaagaatgcaaaacctagctgcatcacttctcaattctatatagggagattttgagattcttacagcattgaatccctattacgggataacttttgt |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46324862 |
gaaaaataatgcaaaacctagctgcatcacttctcaattctatatagggagattttgagattcttacagcattgaatccctattacgggataacttttgt |
46324961 |
T |
|
| Q |
201 |
tgattgttctccatagcacccaacacatcaccagtctctgctcct |
245 |
Q |
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||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
46324962 |
tgattgttctccatagcacccaacacatcaccagtttctggtcct |
46325006 |
T |
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